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{{f5samples
{{f5samples
|id=FF:11232-116C8
|DRA_sample_Accession=CAGE@SAMD00005865
|name=Macrophage - monocyte derived, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005865
|sample_id=11232
|accession_numbers=CAGE;DRX008322;DRR009194;DRZ000619;DRZ002004;DRZ011969;DRZ013354
|rna_tube_id=116C8
|accession_numbers_RNASeq=sRNA-Seq;DRX037073;DRR041439;DRZ007081
|rna_box=116
|ancestors_in_anatomy_facet=
|rna_position=C8
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0000255,CL:0000235
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=3HBiomedical
|rna_lot_number=Mac722
|rna_catalog_number=3H100-80-10
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=65 years old adult
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=65
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=macrophage
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=0.283
|sample_note=
|profile_hcage=CNhs10861,LSID702,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10006,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000235,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000086
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.63!421.28!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.55!351.35!SPI1;;chr7:115670804..115670825,-!p1@TFEC!2.15!140.34!TFEC;;chr12:54778471..54778528,-!p1@ZNF385A!2.11!127.79!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.08!120.15!IRF8;;chr20:39317868..39317884,-!p1@MAFB!1.84!755.15!MAFB;;chr10:31288398..31288455,-!p2@ZNF438!1.76!65.99!ZNF438;;chr11:47400062..47400077,-!p2@SPI1!1.76!55.89!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.63!231.69!NCOA4;;chr1:158985493..158985535,+!p4@IFI16!1.59!56.63!IFI16;;chr7:137620650..137620677,-!p3@CREB3L2!1.59!37.67!CREB3L2;;chr16:79634624..79634642,-!p1@MAF!1.54!127.79!MAF;;chr2:145277640..145277771,-!p1@ZEB2!1.53!416.11!ZEB2;;chr2:145277882..145277967,-!p3@ZEB2!1.53!56.14!ZEB2;;chr7:137620684..137620711,-!p4@CREB3L2!1.53!32.99!CREB3L2;;chr14:75988771..75988826,+!p1@BATF!1.52!42.84!BATF;;chr11:47279504..47279563,+!p1@NR1H3!1.37!50.23!NR1H3;;chr7:50344289..50344323,+!p1@IKZF1!1.36!21.67!IKZF1;;chr7:128577972..128578047,+!p1@IRF5!1.34!32.75!IRF5;;chr10:51572339..51572376,+!p4@NCOA4!1.29!40.87!NCOA4;;chrY:21906594..21906622,-!p1@KDM5D!1.28!17.97!KDM5D;;chr10:31288370..31288393,-!p3@ZNF438!1.22!15.76!ZNF438;;chr11:47399996..47400014,-!p4@SPI1!1.22!15.51!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.19!14.53!SPI1;;chr16:79634595..79634620,-!p2@MAF!1.18!25.85!MAF;;chr5:88178983..88179012,-!p1@MEF2C!1.16!102.67!MEF2C;;chr19:13213954..13214021,-!p4@LYL1!1.16!13.30!LYL1;;chr19:33793430..33793447,-!p1@CEBPA!1.15!54.91!CEBPA;;chr1:158985553..158985574,+!p14@IFI16!1.15!13.05!IFI16;;chr3:69788576..69788648,+!p1@MITF!1.13!65.74!MITF;;chr11:47400045..47400060,-!p6@SPI1!1.13!12.56!SPI1;;chr7:50343634..50343717,+!p2@IKZF1!1.12!12.06!IKZF1;;chr19:50432132..50432217,+!p2@ATF5!1.10!13.79!ATF5;;chr16:67198683..67198698,+!p2@HSF4!1.07!10.83!HSF4;;chr2:70142232..70142251,+!p1@MXD1!1.06!59.34!MXD1;;chr19:13213662..13213686,-!p1@LYL1!1.05!15.27!LYL1;;chr2:68592394..68592405,+!p2@PLEK!1.05!10.34!PLEK;;chr11:128563948..128564003,+!p1@FLI1!1.01!114.00!FLI1;;chr12:12764995..12765017,+!p3@CREBL2!0.99!12.56!CREBL2;;chr11:47400032..47400043,-!p5@SPI1!0.99!8.86!SPI1;;chr13:41593425..41593480,-!p1@ELF1!0.98!55.65!ELF1;;chr16:79633894..79633954,-!p3@MAF!0.97!16.50!MAF;;chrY:2803415..2803468,+!p1@ZFY!0.96!8.13!ZFY;;chr2:231090433..231090469,+!p1@SP140!0.95!7.88!SP140;;chr17:40440481..40440550,+!p1@STAT5A!0.93!56.38!STAT5A;;chr5:88179017..88179046,-!p2@MEF2C!0.93!31.52!MEF2C;;chr7:139762641..139762768,-!p1@PARP12!0.92!103.66!PARP12;;chr19:49140609..49140643,-!p1@DBP!0.92!42.60!DBP;;chr19:13213704..13213726,-!p3@LYL1!0.92!9.85!LYL1;;chr2:113999360..113999386,-!p4@PAX8!0.90!6.89!PAX8;;chr16:31885093..31885165,+!p1@ZNF267!0.89!108.83!ZNF267;;chr7:115670792..115670797,-!p2@TFEC!0.88!6.65!TFEC;;chr18:52989031..52989079,-!p2@TCF4!0.87!15.76!TCF4;;chr12:12764947..12764986,+!p2@CREBL2!0.87!13.05!CREBL2;;chr6:44233252..44233296,-!p1@NFKBIE!0.85!63.28!NFKBIE;;chr1:158979872..158979898,+!p3@IFI16!0.84!19.20!IFI16;;chr9:137217986..137218049,+!p3@RXRA!0.84!17.97!RXRA;;chr10:64576105..64576133,-!p1@EGR2!0.84!12.56!EGR2;;chr16:79634581..79634592,-!p4@MAF!0.84!5.91!MAF;;chr8:116681194..116681214,-!p1@TRPS1!0.82!55.89!TRPS1;;chr16:67198633..67198671,+!p1@HSF4!0.81!5.42!HSF4;;chr7:149470641..149470694,-!p1@ZNF467!0.80!26.10!ZNF467;;chr19:42636586..42636607,-!p1@POU2F2!0.78!15.02!POU2F2;;chr4:106068026..106068084,+!p1@TET2!0.77!48.75!TET2;;chr3:12330560..12330579,+!p1@PPARG!0.77!5.66!PPARG;;chr6:152011654..152011682,+!p1@ESR1!0.77!4.92!ESR1;;chr4:185395633..185395651,-!p2@IRF2!0.76!7.88!IRF2;;chr18:6414884..6414942,-!p1@L3MBTL4!0.76!6.16!L3MBTL4;;chr5:88179195..88179224,-!p3@MEF2C!0.73!7.39!MEF2C;;chr6:144385698..144385742,-!p2@PLAGL1!0.73!5.42!PLAGL1;;chr11:2292226..2292270,-!p1@ASCL2!0.73!4.43!ASCL2;;chr1:158985686..158985719,+!p15@IFI16!0.73!4.43!IFI16;;chr21:30672433..30672464,+!p6@BACH1!0.73!4.43!BACH1;;chr1:158985457..158985468,+!p12@IFI16!0.71!4.19!IFI16;;chr2:113994526..113994556,-!p3@PAX8!0.71!4.19!PAX8;;chr2:145277792..145277808,-!p15@ZEB2!0.71!4.19!ZEB2;;chr19:35759824..35759891,+!p1@USF2!0.69!139.36!USF2;;chrX:131623044..131623089,-!p1@MBNL3!0.69!18.22!MBNL3;;chr19:49140572..49140594,-!p2@DBP!0.69!6.65!DBP;;chr2:145275982..145276003,-!p7@ZEB2!0.69!3.94!ZEB2;;chr2:145277833..145277845,-!p16@ZEB2!0.69!3.94!ZEB2;;chr2:61108695..61108753,+!p1@REL!0.68!29.79!REL;;chr10:94449703..94449718,+!p1@HHEX!0.68!16.50!HHEX;;chr1:158985469..158985489,+!p7@IFI16!0.68!4.68!IFI16;;chr10:35484804..35484902,+!p2@CREM!0.67!16.00!CREM;;chr8:116680215..116680245,-!p6@TRPS1!0.67!6.16!TRPS1;;chr7:50344251..50344288,+!p3@IKZF1!0.67!3.69!IKZF1;;chr2:145277589..145277612,-!p12@ZEB2!0.67!3.69!ZEB2;;chrY:21906761..21906810,-!p2@KDM5D!0.67!3.69!KDM5D;;chr7:149470540..149470596,-!p2@ZNF467!0.66!4.92!ZNF467;;chr3:48282587..48282603,+!p1@ZNF589!0.65!17.73!ZNF589;;chr2:145275947..145275981,-!p10@ZEB2!0.65!3.45!ZEB2;;chr20:3388238..3388323,-!p1@C20orf194!0.64!28.07!C20orf194;;chr6:41703296..41703367,-!p1@TFEB!0.64!19.94!TFEB;;chr1:8926441..8926473,-!p10@ENO1!0.64!5.42!ENO1;;chr14:68283291..68283323,-!p1@ZFYVE26!0.63!63.77!ZFYVE26;;chr12:11802753..11802834,+!p2@ETV6!0.63!18.47!ETV6;;chr18:74207147..74207183,-!p1@ZNF516!0.63!11.08!ZNF516;;chr18:52989081..52989117,-!p7@TCF4!0.63!5.42!TCF4;;chr2:192015750..192015793,-!p2@STAT4!0.63!4.68!STAT4;;chr3:185826855..185826911,-!p1@ETV5!0.62!102.92!ETV5;;chr16:73092898..73092931,-!p1@ZFHX3!0.62!14.03!ZFHX3;;chr15:90544532..90544563,+!p1@ZNF710!0.62!7.14!ZNF710;;chr3:187455680..187455700,-!p4@BCL6!0.62!3.20!BCL6;;chr1:158979686..158979745,+!p1@IFI16!0.61!121.63!IFI16;;chr4:185395590..185395627,-!p3@IRF2!0.61!3.94!IRF2;;chr4:87928328..87928351,+!p6@AFF1!0.60!9.11!AFF1;;chr2:122042770..122042785,-!p1@TFCP2L1!0.60!2.95!TFCP2L1;;chr1:78050720..78050734,-!p9@ZZZ3!0.60!2.95!ZZZ3;;chr20:3321190..3321215,-!p7@C20orf194!0.60!2.95!C20orf194;;chr15:90545434..90545449,+!p9@ZNF710!0.60!2.95!ZNF710;;chr5:71803177..71803255,-!p1@ZNF366!0.60!2.95!ZNF366;;chr2:61108650..61108687,+!p2@REL!0.59!16.74!REL;;chr3:48282536..48282586,+!p2@ZNF589!0.59!9.11!ZNF589;;chr8:71316428..71316459,-!p2@NCOA2!0.59!5.42!NCOA2;;chr16:73093174..73093209,-!p3@ZFHX3!0.59!4.19!ZFHX3;;chr16:88752889..88752921,-!p1@SNAI3!0.59!3.45!SNAI3;;chr4:87857474..87857489,+!p7@AFF1!0.58!5.42!AFF1;;chr14:58765305..58765324,+!p4@ARID4A!0.58!3.69!ARID4A;;chr8:116681247..116681261,-!p8@TRPS1!0.57!3.69!TRPS1;;chr2:231090344..231090361,-!p3@SP110!0.57!2.71!SP110;;chr19:45251395..45251432,+!p8@BCL3!0.57!2.71!BCL3;;chr14:75988831..75988847,+!p2@BATF!0.57!2.71!BATF;;chr10:31288329..31288353,-!p7@ZNF438!0.57!2.71!ZNF438;;chr4:26322616..26322652,+!p1@RBPJ!0.56!71.90!RBPJ;;chr17:79881332..79881348,-!p3@MAFG!0.56!4.19!MAFG;;chr1:156470515..156470542,-!p2@MEF2D!0.55!16.50!MEF2D;;chr10:31320777..31320834,-!p1@ZNF438!0.55!16.00!ZNF438;;chr5:142782823..142782854,-!p3@NR3C1!0.55!3.94!NR3C1;;chr2:238600789..238600925,+!p1@LRRFIP1!0.54!62.79!LRRFIP1;;chr4:18023350..18023385,-!p1@LCORL!0.54!26.10!LCORL;;chr2:178128199..178128245,-!p3@NFE2L2!0.54!16.50!NFE2L2;;chr8:116681123..116681143,-!p4@TRPS1!0.54!5.42!TRPS1;;chr6:391743..391759,+!p1@IRF4!0.54!2.46!IRF4;;chr6:41691289..41691312,-!p9@TFEB!0.54!2.46!TFEB;;chr8:53373491..53373506,-!p4@ST18!0.54!2.46!ST18;;chr3:129158715..129158766,-!p2@MBD4!0.53!29.30!MBD4;;chr1:158979851..158979865,+!p5@IFI16!0.53!6.16!IFI16;;chr5:88179230..88179270,-!p4@MEF2C!0.53!5.42!MEF2C;;chr4:87857433..87857472,+!p9@AFF1!0.53!4.92!AFF1;;chr2:178128149..178128198,-!p2@NFE2L2!0.52!15.76!NFE2L2;;chr6:7108855..7108903,+!p5@RREB1!0.52!6.16!RREB1;;chr7:99156393..99156433,+!p6@ZNF655!0.52!6.16!ZNF655;;chr15:100106155..100106243,+!p1@MEF2A!0.51!76.82!MEF2A;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.51!18.71!ZNF580;;chr12:26277956..26277980,-!p1@BHLHE41!0.51!10.09!BHLHE41;;chr19:926001..926046,+!p1@ARID3A!0.51!9.60!ARID3A;;chr16:68118689..68118733,+!p3@NFATC3!0.51!6.89!NFATC3;;chr19:49140595..49140607,-!p3@DBP!0.51!3.45!DBP;;chr10:38299412..38299430,+!p2@ZNF33A!0.51!2.22!ZNF33A;;chr7:139762578..139762589,-!p2@PARP12!0.51!2.22!PARP12;;chr7:149470297..149470337,-!p3@ZNF467!0.51!2.22!ZNF467;;chr2:145277820..145277831,-!p18@ZEB2!0.51!2.22!ZEB2;;chr15:90544182..90544195,+!p7@ZNF710!0.51!2.22!ZNF710;;chr21:30671235..30671253,+!p1@BACH1!0.50!36.69!BACH1;;chr2:174830564..174830605,-!p3@SP3!0.50!13.79!SP3;;chr5:76383017..76383068,-!p1@ZBED3!0.50!9.85!ZBED3;;chrX:101186981..101187030,-!p1@ZMAT1!0.50!8.86!ZMAT1;;chr6:42419514..42419606,-!p1@TRERF1!0.50!5.66!TRERF1;;chr8:72756063..72756125,-!p1@MSC!0.50!5.17!MSC;;chr1:8484007..8484061,-!p13@RERE!0.50!2.95!RERE;;chr20:48807351..48807384,+!p1@CEBPB!0.49!291.77!CEBPB;;chr3:129158768..129158819,-!p1@MBD4!0.49!42.35!MBD4;;chr2:97202480..97202499,+!p1@ARID5A!0.49!28.31!ARID5A;;chr14:58765217..58765301,+!p1@ARID4A!0.49!24.87!ARID4A;;chr6:7108569..7108683,+!p3@RREB1!0.49!10.34!RREB1;;chr19:54041382..54041437,+!p3@ZNF331!0.49!7.39!ZNF331;;chr10:94449675..94449694,+!p2@HHEX!0.49!6.89!HHEX;;chr19:36391434..36391450,-!p1@NFKBID!0.49!4.92!NFKBID;;chr12:12764773..12764852,+!p1@CREBL2!0.48!70.17!CREBL2;;chr21:30671189..30671207,+!p4@BACH1!0.48!9.11!BACH1;;chr14:89883412..89883478,-!p3@FOXN3!0.48!8.13!FOXN3;;chr9:117150254..117150271,-!p1@AKNA!0.48!6.89!AKNA;;chr8:116681150..116681164,-!p5@TRPS1!0.48!4.68!TRPS1;;chr20:48807456..48807475,+!p3@CEBPB!0.48!4.68!CEBPB;;chr18:77160282..77160343,+!p2@NFATC1!0.47!16.00!NFATC1;;chr2:145275162..145275202,-!p2@ZEB2!0.47!15.27!ZEB2;;chr15:100106670..100106697,+!p4@MEF2A!0.47!3.69!MEF2A;;chr7:28725715..28725727,+!p3@CREB5!0.47!2.46!CREB5;;chr19:10416315..10416333,-!p1@ZGLP1!0.47!1.97!ZGLP1;;chr11:47399920..47399931,-!p7@SPI1!0.47!1.97!SPI1;;chr12:54778351..54778378,-!p6@ZNF385A!0.47!1.97!ZNF385A;;chr5:142784003..142784065,-!p2@NR3C1!0.46!21.17!NR3C1;;chr8:116681221..116681236,-!p3@TRPS1!0.46!7.14!TRPS1;;chr19:925727..925784,+!p3@ARID3A!0.46!4.92!ARID3A;;chr19:53496806..53496848,-!p2@ZNF702P!0.46!3.20!ZNF702P;;chr8:72756213..72756243,-!p5@MSC!0.46!2.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1.23!STAT4;;chr6:45390343..45390388,+!p10@RUNX2!0.22!1.23!RUNX2;;chr13:41556186..41556208,-!p12@ELF1!0.22!0.98!ELF1;;chr3:75834722..75834733,-!p2@ZNF717!0.22!0.98!ZNF717;;chr14:65569186..65569243,-!p1@MAX!0.21!87.90!MAX;;chr7:101459263..101459310,+!p1@CUX1!0.21!86.67!CUX1;;chr11:66886717..66886762,+!p1@KDM2A!0.21!29.55!KDM2A;;chr12:11802600..11802685,+!p1@ETV6!0.21!21.67!ETV6;;chr10:98592009..98592061,+!p1@C10orf12,p1@LCOR!0.21!20.68!LCOR;;chrX:119384629..119384720,+!p1@ZBTB33!0.21!18.96!ZBTB33;;chr1:40627038..40627071,+!p1@RLF!0.21!18.47!RLF;;chr19:9251052..9251079,+!p2@ZNF317!0.21!13.79!ZNF317;;chr17:61920280..61920343,-!p2@SMARCD2!0.21!13.79!SMARCD2;;chr19:40562072..40562143,-!p1@ZNF780B!0.21!12.80!ZNF780B;;chr6:35310312..35310359,+!p1@PPARD!0.21!12.56!PPARD;;chr2:145274900..145274934,-!p4@ZEB2!0.21!8.37!ZEB2;;chr19:58361185..58361235,+!p2@ZNF587!0.21!7.14!ZNF587;;chr2:95831529..95831569,+!p1@ZNF2!0.21!6.16!ZNF2;;chr12:96588279..96588299,+!p4@ELK3!0.21!6.16!ELK3;;chr2:208394817..208394834,+!p3@CREB1!0.21!5.17!CREB1;;chr19:58694742..58694800,+!p2@ZNF274!0.21!5.17!ZNF274;;chr17:38219143..38219154,+!p2@THRA!0.21!4.43!THRA;;chr9:129622904..129622956,+!p1@ZBTB34!0.21!4.43!ZBTB34;;chr19:44809143..44809187,-!p1@ZNF235!0.21!3.69!ZNF235;;chr19:3359257..3359362,+!p3@NFIC!0.21!3.69!NFIC;;chr5:139493727..139493766,+!p4@PURA!0.21!3.45!PURA;;chr1:8484314..8484348,-!p7@RERE!0.21!3.20!RERE;;chr9:2017383..2017417,+!p5@SMARCA2!0.21!2.46!SMARCA2;;chr17:61920246..61920272,-!p4@SMARCD2!0.21!2.46!SMARCD2;;chr18:47814186..47814232,-!p2@CXXC1!0.21!2.22!CXXC1;;chr19:11909329..11909394,+!p1@ZNF491!0.21!2.22!ZNF491;;chr20:42143077..42143126,+!p1@L3MBTL1!0.21!2.22!L3MBTL;;chr12:46123273..46123329,+!p3@ARID2!0.21!1.72!ARID2;;chr12:498671..498693,-!p4@KDM5A!0.21!1.72!KDM5A;;chr15:77713299..77713316,+!p3@HMG20A!0.21!1.48!HMG20A;;chr15:74833547..74833567,+!p2@ARID3B!0.21!1.23!ARID3B;;chr8:135725369..135725388,-!p3@ZFAT!0.21!1.23!ZFAT;;chr7:92076714..92076729,+!p2@GATAD1!0.21!0.98!GATAD1;;chr3:114343195..114343206,-!p11@ZBTB20!0.21!0.98!ZBTB20;;chr3:170075080..170075089,+!p7@SKIL!0.21!0.98!SKIL;;chr17:40719165..40719168,+!p4@MLX!0.21!0.98!MLX;;chr12:53835508..53835533,+!p1@PRR13,p2@PCBP2!0.20!109.57!PCBP2;;chr1:14075903..14075940,+!p1@PRDM2!0.20!30.04!PRDM2;;chr19:9731872..9731915,-!p1@ZNF561!0.20!18.22!ZNF561;;chr22:30162924..30163005,-!p1@ZMAT5!0.20!17.24!ZMAT5;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.20!13.05!ZNF595;;chr12:56512026..56512064,+!p1@ZC3H10,p2@ESYT1!0.20!12.56!ZC3H10;;chr19:53141584..53141625,-!p2@ZNF83!0.20!10.83!ZNF83;;chr19:11925071..11925113,+!p1@ZNF440!0.20!9.60!ZNF440;;chr6:108880956..108881011,+!p1@FOXO3!0.20!8.86!FOXO3;;chr12:133614062..133614117,+!p1@ZNF84!0.20!8.62!ZNF84;;chr10:104154246..104154347,+!p3@NFKB2!0.20!8.13!NFKB2;;chr4:140005341..140005411,-!p3@ELF2!0.20!6.89!ELF2;;chr9:125667618..125667678,-!p2@RC3H2!0.20!5.66!RC3H2;;chrX:134477924..134477988,-!p1@ZNF75D!0.20!4.68!ZNF75D;;chr14:35872453..35872485,-!p2@NFKBIA!0.20!2.71!NFKBIA;;chr3:12329358..12329393,+!p3@PPARG!0.20!2.71!PPARG;;chr19:44645700..44645725,+!p3@ZNF226,p3@ZNF234!0.20!2.46!ZNF234;;chr19:21950332..21950356,-!p2@ZNF100!0.20!2.22!ZNF100;;chr10:43932296..43932360,+!p1@ZNF487P!0.20!2.22!ZNF487P;;chr22:46546494..46546525,+!p2@PPARA!0.20!1.97!PPARA;;chr17:61920116..61920131,-!p5@SMARCD2!0.20!1.97!SMARCD2;;chr9:116638634..116638664,+!p2@ZNF618!0.20!1.97!ZNF618;;chr1:249132608..249132628,+!p5@ZNF672!0.20!1.72!ZNF672;;chr7:86781858..86781879,+!p3@DMTF1!0.20!1.48!DMTF1;;chr9:2015275..2015287,+!p8@SMARCA2!0.20!1.48!SMARCA2;;chr20:48807648..48807671,+!p9@CEBPB!0.20!1.23!CEBPB;;chr3:141087144..141087170,+!p11@ZBTB38!0.20!0.98!ZBTB38;;chr19:45579762..45579772,-!p2@ZNF296!0.20!0.74!ZNF296;;chr18:3448314..3448333,+!p18@TGIF1!0.20!0.74!TGIF1;;chr4:144434814..144434932,+!p1@SMARCA5!0.19!69.19!SMARCA5;;chr2:27357479..27357524,-!p1@PREB!0.19!39.64!PREB;;chr14:75894714..75894733,+!p1@JDP2!0.19!39.15!JDP2;;chr10:51565239..51565263,+!p2@NCOA4!0.19!32.01!NCOA4;;chr12:51157837..51157892,+!p1@ATF1!0.19!30.04!ATF1;;chr3:170075436..170075520,+!p1@SKIL!0.19!30.04!SKIL;;chr1:161015706..161015747,-!p1@USF1!0.19!16.00!USF1;;chr3:141747459..141747475,-!p1@TFDP2!0.19!11.08!TFDP2;;chr12:133562959..133563013,+!p1@ZNF26!0.19!8.62!ZNF26;;chr19:52408257..52408278,-!p1@ZNF649!0.19!8.37!ZNF649;;chr16:30537839..30537929,-!p1@ZNF768!0.19!8.13!ZNF768;;chr1:14026671..14026705,+!p2@PRDM2!0.19!7.88!PRDM2;;chr4:2263861..2263883,-!p2@MXD4!0.19!7.63!MXD4;;chr15:43663214..43663261,-!p@chr15:43663214..43663261,-!0.19!7.39!ZSCAN29;;chr12:46123464..46123512,+!p1@ARID2!0.19!7.39!ARID2;;chr19:59084647..59084721,-!p1@MZF1!0.19!6.16!MZF1;;chr19:40596828..40596855,-!p1@ZNF780A!0.19!5.17!ZNF780A;;chr19:44617538..44617598,+!p1@ZNF225!0.19!4.68!ZNF225;;chr19:56915668..56915732,+!p1@ZNF583!0.19!4.43!ZNF583;;chr9:32552552..32552576,-!p2@TOPORS!0.19!4.43!TOPORS;;chr19:44455368..44455396,+!p1@ZNF221!0.19!3.94!ZNF221;;chr19:44598498..44598529,+!p1@ZNF224!0.19!3.69!ZNF224;;chr14:65569101..65569119,-!p3@M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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000235;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000049,CL:0000134
|fonse_cell_line=
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|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
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|fonse_treatment_closure=
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|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor1.CNhs10861.11232-116C8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Macrophage%2520-%2520monocyte%2520derived%252c%2520donor1.CNhs10861.11232-116C8.hg38.nobarcode.ctss.bed.gz
|id=FF:11232-116C8
|is_a=EFO:0002091;;FF:0000086
|is_obsolete=
|library_id=CNhs10861
|library_id_phase_based=2:CNhs10861
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11232
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10006.GCCAAT.11232
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11232
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10006.GCCAAT.11232
|name=Macrophage - monocyte derived, donor1
|namespace=FANTOM5
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|rna_box=116
|rna_catalog_number=3H100-80-10
|rna_concentration=0.283
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=Mac722
|rna_od260/230=
|rna_od260/280=
|rna_position=C8
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=116C8
|rna_weight_ug=10
|rnaseq_library_id=SRhi10006.GCCAAT
|sample_age=65
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=macrophage
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=3HBiomedical
|sample_description=
|sample_dev_stage=65 years old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.25816756650092e-231!GO:0005737;cytoplasm;7.83840710958623e-169!GO:0043227;membrane-bound organelle;3.61594488804103e-148!GO:0043231;intracellular membrane-bound organelle;8.82441533700959e-148!GO:0043226;organelle;1.01904984978917e-133!GO:0043229;intracellular organelle;5.07241520299579e-133!GO:0044444;cytoplasmic part;7.05781297634615e-132!GO:0044422;organelle part;6.65499758596987e-106!GO:0044446;intracellular organelle part;5.9550122634883e-104!GO:0044237;cellular metabolic process;8.59390484713633e-74!GO:0032991;macromolecular complex;8.83318378026807e-73!GO:0044238;primary metabolic process;8.3482120832916e-72!GO:0043170;macromolecule metabolic process;9.944733930007e-62!GO:0005739;mitochondrion;5.55194191959868e-58!GO:0030529;ribonucleoprotein complex;7.26799763021312e-58!GO:0031090;organelle membrane;8.70978669608743e-56!GO:0003723;RNA binding;4.08399391207374e-54!GO:0005515;protein binding;3.79122485323568e-50!GO:0043233;organelle lumen;5.52179052443234e-50!GO:0031974;membrane-enclosed lumen;5.52179052443234e-50!GO:0033036;macromolecule localization;2.79664770768713e-49!GO:0044428;nuclear part;1.04810148210355e-48!GO:0019538;protein metabolic process;8.27712931219533e-48!GO:0015031;protein transport;2.57805538912556e-47!GO:0045184;establishment of protein localization;5.58871242987294e-47!GO:0008104;protein localization;4.51237988966012e-46!GO:0044260;cellular macromolecule metabolic process;1.05845034867606e-43!GO:0044267;cellular protein metabolic process;5.4739365364413e-43!GO:0044429;mitochondrial part;1.07305646143787e-41!GO:0005634;nucleus;5.00832788885835e-41!GO:0006412;translation;9.34941463578215e-41!GO:0009058;biosynthetic process;2.64012243614769e-40!GO:0043234;protein complex;1.54634998810188e-38!GO:0031967;organelle envelope;2.65813235920813e-38!GO:0031975;envelope;5.94625674276638e-38!GO:0005829;cytosol;5.67766104543636e-37!GO:0009059;macromolecule biosynthetic process;5.44221378868635e-36!GO:0006396;RNA processing;3.65200036346791e-35!GO:0044249;cellular biosynthetic process;4.81921647214739e-34!GO:0005840;ribosome;1.23688561823703e-32!GO:0046907;intracellular transport;1.50036240034654e-32!GO:0016071;mRNA metabolic process;2.15609128789431e-31!GO:0006886;intracellular protein transport;5.58738028094186e-30!GO:0016043;cellular component organization and biogenesis;2.68095921158138e-29!GO:0005740;mitochondrial envelope;3.1300194015484e-29!GO:0031981;nuclear lumen;3.92986467880956e-28!GO:0003735;structural constituent of ribosome;4.1232892174472e-28!GO:0008380;RNA splicing;5.77367010076782e-28!GO:0043283;biopolymer metabolic process;1.15313259859478e-27!GO:0031966;mitochondrial membrane;1.42512087586013e-27!GO:0006397;mRNA processing;5.28253842046335e-27!GO:0051649;establishment of cellular localization;3.98562685795137e-26!GO:0006119;oxidative phosphorylation;9.14907684780255e-26!GO:0033279;ribosomal subunit;2.07848381279016e-25!GO:0019866;organelle inner membrane;2.10043230655847e-25!GO:0051641;cellular localization;2.15807889204883e-25!GO:0065003;macromolecular complex assembly;3.78086285736528e-25!GO:0005743;mitochondrial inner membrane;6.9399139431975e-24!GO:0005773;vacuole;2.20227032952854e-22!GO:0012505;endomembrane system;1.74072908563469e-21!GO:0022607;cellular component assembly;1.74943311665277e-21!GO:0010467;gene expression;2.30475231149349e-21!GO:0000323;lytic vacuole;7.13975483679001e-21!GO:0005764;lysosome;7.13975483679001e-21!GO:0005681;spliceosome;1.43483399982153e-20!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.7346584825299e-20!GO:0044248;cellular catabolic process;4.21513076578219e-20!GO:0044265;cellular macromolecule catabolic process;4.54033529388181e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.10776581341619e-19!GO:0005654;nucleoplasm;1.10776581341619e-19!GO:0048770;pigment granule;1.85539149192035e-19!GO:0042470;melanosome;1.85539149192035e-19!GO:0051186;cofactor metabolic process;4.22898726386667e-19!GO:0016192;vesicle-mediated transport;4.46302167727001e-19!GO:0000166;nucleotide binding;5.23342257849896e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.3083301184437e-19!GO:0044455;mitochondrial membrane part;1.7980419435531e-18!GO:0006996;organelle organization and biogenesis;4.76886589521432e-18!GO:0044445;cytosolic part;1.08262331448797e-17!GO:0043285;biopolymer catabolic process;1.09475954648747e-17!GO:0005794;Golgi apparatus;1.30079110689594e-17!GO:0009057;macromolecule catabolic process;1.44051023436974e-17!GO:0016462;pyrophosphatase activity;2.09313732122209e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.11346158250833e-17!GO:0006915;apoptosis;2.4947797655125e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;2.69752873619586e-17!GO:0012501;programmed cell death;2.85039964018993e-17!GO:0005746;mitochondrial respiratory chain;4.3773408243436e-17!GO:0006512;ubiquitin cycle;1.08548414998804e-16!GO:0005783;endoplasmic reticulum;1.15265379914182e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.48344580842049e-16!GO:0017111;nucleoside-triphosphatase activity;1.70980308431698e-16!GO:0006259;DNA metabolic process;3.67697972420741e-16!GO:0008219;cell death;5.40688973396818e-16!GO:0016265;death;5.40688973396818e-16!GO:0006732;coenzyme metabolic process;7.69243269145016e-16!GO:0006605;protein targeting;1.1156100134811e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.17206244174246e-15!GO:0044257;cellular protein catabolic process;1.73078814042397e-15!GO:0019941;modification-dependent protein catabolic process;1.97313801350398e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.97313801350398e-15!GO:0006457;protein folding;2.47131268455119e-15!GO:0016874;ligase activity;2.82420827852804e-15!GO:0044432;endoplasmic reticulum part;3.01321469389805e-15!GO:0050136;NADH dehydrogenase (quinone) activity;3.15347672098349e-15!GO:0003954;NADH dehydrogenase activity;3.15347672098349e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.15347672098349e-15!GO:0006511;ubiquitin-dependent protein catabolic process;3.60360059150321e-15!GO:0044451;nucleoplasm part;3.75607894034318e-15!GO:0022618;protein-RNA complex assembly;3.97570700936531e-15!GO:0031980;mitochondrial lumen;5.9968221025518e-15!GO:0005759;mitochondrial matrix;5.9968221025518e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.69277338336375e-14!GO:0017076;purine nucleotide binding;1.72028178791266e-14!GO:0032553;ribonucleotide binding;2.29144555556751e-14!GO:0032555;purine ribonucleotide binding;2.29144555556751e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.54030270456212e-14!GO:0015935;small ribosomal subunit;4.93254844682211e-14!GO:0030163;protein catabolic process;6.82785015458965e-14!GO:0042775;organelle ATP synthesis coupled electron transport;8.15691880025524e-14!GO:0042773;ATP synthesis coupled electron transport;8.15691880025524e-14!GO:0043412;biopolymer modification;1.02487361284097e-13!GO:0009056;catabolic process;1.13201814413192e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.56831740211549e-13!GO:0045271;respiratory chain complex I;1.56831740211549e-13!GO:0005747;mitochondrial respiratory chain complex I;1.56831740211549e-13!GO:0008134;transcription factor binding;1.88081674136367e-13!GO:0005768;endosome;3.35549971780228e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.80049265649121e-13!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.96875206249422e-13!GO:0016787;hydrolase activity;2.22619325469952e-12!GO:0015934;large ribosomal subunit;2.26007828368352e-12!GO:0006464;protein modification process;2.35854754946426e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.75805323516596e-12!GO:0005789;endoplasmic reticulum membrane;4.32439402593881e-12!GO:0048193;Golgi vesicle transport;7.79986850283489e-12!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.17172366942259e-11!GO:0016604;nuclear body;1.20471216936467e-11!GO:0006163;purine nucleotide metabolic process;1.30920877180267e-11!GO:0006913;nucleocytoplasmic transport;1.33083597857059e-11!GO:0009150;purine ribonucleotide metabolic process;1.70537086063896e-11!GO:0009259;ribonucleotide metabolic process;1.88307072364343e-11!GO:0042623;ATPase activity, coupled;1.88307072364343e-11!GO:0016887;ATPase activity;2.08840719962131e-11!GO:0051169;nuclear transport;2.69649927183616e-11!GO:0019829;cation-transporting ATPase activity;3.05255965162698e-11!GO:0051188;cofactor biosynthetic process;3.43378890596321e-11!GO:0015986;ATP synthesis coupled proton transport;3.71078959440837e-11!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.71078959440837e-11!GO:0009055;electron carrier activity;3.76484585254769e-11!GO:0005524;ATP binding;3.81151461686746e-11!GO:0006164;purine nucleotide biosynthetic process;5.01276207483296e-11!GO:0032559;adenyl ribonucleotide binding;5.38551689545042e-11!GO:0030554;adenyl nucleotide binding;5.42060450778307e-11!GO:0015078;hydrogen ion transmembrane transporter activity;5.84354633251058e-11!GO:0009152;purine ribonucleotide biosynthetic process;6.0286504830478e-11!GO:0042981;regulation of apoptosis;7.05387429444409e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.06279391753844e-11!GO:0008135;translation factor activity, nucleic acid binding;7.50211057728059e-11!GO:0006974;response to DNA damage stimulus;8.08806355102586e-11!GO:0051082;unfolded protein binding;1.02639611859513e-10!GO:0043067;regulation of programmed cell death;1.15911062313127e-10!GO:0005774;vacuolar membrane;1.8382697749453e-10!GO:0009260;ribonucleotide biosynthetic process;1.89281137517269e-10!GO:0043687;post-translational protein modification;2.49344886630452e-10!GO:0005770;late endosome;3.24790900996707e-10!GO:0043228;non-membrane-bound organelle;3.64318426220625e-10!GO:0043232;intracellular non-membrane-bound organelle;3.64318426220625e-10!GO:0005635;nuclear envelope;4.47605222300074e-10!GO:0005761;mitochondrial ribosome;4.71740909533374e-10!GO:0000313;organellar ribosome;4.71740909533374e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.02446851356947e-10!GO:0009144;purine nucleoside triphosphate metabolic process;5.02446851356947e-10!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.27291295040349e-10!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.27291295040349e-10!GO:0006950;response to stress;6.74785186241563e-10!GO:0009199;ribonucleoside triphosphate metabolic process;7.05952851250812e-10!GO:0006754;ATP biosynthetic process;8.08170055582397e-10!GO:0006753;nucleoside phosphate metabolic process;8.08170055582397e-10!GO:0051246;regulation of protein metabolic process;8.08170055582397e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;8.26793330386135e-10!GO:0009142;nucleoside triphosphate biosynthetic process;9.37867251251976e-10!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.37867251251976e-10!GO:0016607;nuclear speck;9.62068045282031e-10!GO:0006413;translational initiation;9.90763594377051e-10!GO:0006461;protein complex assembly;9.93917689838816e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;1.01845428772717e-09!GO:0000375;RNA splicing, via transesterification reactions;1.01845428772717e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.01845428772717e-09!GO:0008639;small protein conjugating enzyme activity;1.03814115642347e-09!GO:0046034;ATP metabolic process;1.0543960831054e-09!GO:0005765;lysosomal membrane;1.31075584308775e-09!GO:0044437;vacuolar part;1.31075584308775e-09!GO:0016469;proton-transporting two-sector ATPase complex;1.47584918320156e-09!GO:0009141;nucleoside triphosphate metabolic process;1.48638275065639e-09!GO:0007049;cell cycle;1.49581456358261e-09!GO:0009108;coenzyme biosynthetic process;1.59247890201809e-09!GO:0005730;nucleolus;1.84182063702025e-09!GO:0003743;translation initiation factor activity;1.88398100691261e-09!GO:0006446;regulation of translational initiation;2.11336902209925e-09!GO:0004842;ubiquitin-protein ligase activity;2.44444016792293e-09!GO:0003676;nucleic acid binding;3.69380406415924e-09!GO:0019787;small conjugating protein ligase activity;3.83034575978302e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.22050460004569e-09!GO:0008565;protein transporter activity;4.85358907382213e-09!GO:0009060;aerobic respiration;5.14992820775464e-09!GO:0017038;protein import;6.62231823475378e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.98980324848046e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.50410316605507e-09!GO:0044440;endosomal part;7.8588853204159e-09!GO:0010008;endosome membrane;7.8588853204159e-09!GO:0006281;DNA repair;8.89848812160128e-09!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.04733160900369e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.88925189928028e-09!GO:0016491;oxidoreductase activity;1.33724116379506e-08!GO:0007243;protein kinase cascade;1.60779234035439e-08!GO:0005793;ER-Golgi intermediate compartment;1.82776042436347e-08!GO:0043069;negative regulation of programmed cell death;4.90127040959259e-08!GO:0045333;cellular respiration;5.51867697552073e-08!GO:0016881;acid-amino acid ligase activity;6.40787281546573e-08!GO:0043066;negative regulation of apoptosis;6.40787281546573e-08!GO:0008047;enzyme activator activity;6.42408012286624e-08!GO:0004386;helicase activity;1.09354067311882e-07!GO:0044453;nuclear membrane part;1.22020311760383e-07!GO:0031965;nuclear membrane;1.27580420185266e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.27580420185266e-07!GO:0006099;tricarboxylic acid cycle;1.306738132558e-07!GO:0046356;acetyl-CoA catabolic process;1.306738132558e-07!GO:0009117;nucleotide metabolic process;1.46561731941948e-07!GO:0006752;group transfer coenzyme metabolic process;1.63969723751923e-07!GO:0009719;response to endogenous stimulus;1.74470838879146e-07!GO:0044262;cellular carbohydrate metabolic process;1.76508015822745e-07!GO:0003712;transcription cofactor activity;1.77093418255649e-07!GO:0006793;phosphorus metabolic process;2.14421070699707e-07!GO:0006796;phosphate metabolic process;2.14421070699707e-07!GO:0009615;response to virus;2.54363947659213e-07!GO:0006916;anti-apoptosis;2.63087888788526e-07!GO:0051187;cofactor catabolic process;2.89114542205894e-07!GO:0044431;Golgi apparatus part;3.27024816683877e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.37858480748095e-07!GO:0005839;proteasome core complex (sensu Eukaryota);4.09232143567709e-07!GO:0006091;generation of precursor metabolites and energy;4.66539756059623e-07!GO:0031982;vesicle;5.01974724180988e-07!GO:0006084;acetyl-CoA metabolic process;5.22410490442942e-07!GO:0051170;nuclear import;5.49246078477405e-07!GO:0031252;leading edge;5.54260572683718e-07!GO:0016310;phosphorylation;5.63253345474796e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.55271770035442e-07!GO:0050657;nucleic acid transport;6.55271770035442e-07!GO:0051236;establishment of RNA localization;6.55271770035442e-07!GO:0050658;RNA transport;6.55271770035442e-07!GO:0005096;GTPase activator activity;6.89728408108741e-07!GO:0008654;phospholipid biosynthetic process;7.67317550727075e-07!GO:0008026;ATP-dependent helicase activity;8.30113368780825e-07!GO:0016070;RNA metabolic process;8.31898593156264e-07!GO:0006403;RNA localization;9.29346270290562e-07!GO:0006606;protein import into nucleus;1.0216731457968e-06!GO:0006818;hydrogen transport;1.15909866979385e-06!GO:0022402;cell cycle process;1.22646487170932e-06!GO:0048475;coated membrane;1.33228141383536e-06!GO:0030117;membrane coat;1.33228141383536e-06!GO:0009109;coenzyme catabolic process;1.35638648866648e-06!GO:0065009;regulation of a molecular function;1.47696985379144e-06!GO:0032446;protein modification by small protein conjugation;1.66006829750973e-06!GO:0005643;nuclear pore;1.77350831468792e-06!GO:0015992;proton transport;2.05491398400227e-06!GO:0007242;intracellular signaling cascade;2.0656130074529e-06!GO:0006417;regulation of translation;2.19561845808329e-06!GO:0016044;membrane organization and biogenesis;2.31992834875814e-06!GO:0004298;threonine endopeptidase activity;2.50064656268707e-06!GO:0016567;protein ubiquitination;2.51719511989652e-06!GO:0031410;cytoplasmic vesicle;2.79852946097423e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.83721226934024e-06!GO:0015399;primary active transmembrane transporter activity;2.83721226934024e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.96859301671641e-06!GO:0022890;inorganic cation transmembrane transporter activity;3.03295306539927e-06!GO:0016740;transferase activity;3.08044114951811e-06!GO:0065002;intracellular protein transport across a membrane;3.32888217197538e-06!GO:0031988;membrane-bound vesicle;3.33586579984821e-06!GO:0030120;vesicle coat;3.44351170475359e-06!GO:0030662;coated vesicle membrane;3.44351170475359e-06!GO:0031902;late endosome membrane;3.56026108250467e-06!GO:0045259;proton-transporting ATP synthase complex;3.78629893871016e-06!GO:0007040;lysosome organization and biogenesis;4.39741947166061e-06!GO:0042254;ribosome biogenesis and assembly;4.47866034443918e-06!GO:0051726;regulation of cell cycle;4.64530969948233e-06!GO:0000074;regulation of progression through cell cycle;4.77848598041986e-06!GO:0007264;small GTPase mediated signal transduction;5.44324345570608e-06!GO:0046930;pore complex;5.50482965283747e-06!GO:0003697;single-stranded DNA binding;5.9665248692708e-06!GO:0007033;vacuole organization and biogenesis;5.9665248692708e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.40029316259536e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;6.72506911512338e-06!GO:0044255;cellular lipid metabolic process;7.07291893543624e-06!GO:0000151;ubiquitin ligase complex;7.94721942057961e-06!GO:0005525;GTP binding;8.57188268381692e-06!GO:0030695;GTPase regulator activity;9.55887665476277e-06!GO:0005694;chromosome;1.15425434769888e-05!GO:0051276;chromosome organization and biogenesis;1.16806460215657e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.21564237616027e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.24219063361297e-05!GO:0006643;membrane lipid metabolic process;1.28509549298169e-05!GO:0043566;structure-specific DNA binding;1.34528469523402e-05!GO:0051028;mRNA transport;1.35233571996441e-05!GO:0048523;negative regulation of cellular process;1.3642011923151e-05!GO:0006399;tRNA metabolic process;1.37800055257072e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;1.48215584365559e-05!GO:0019899;enzyme binding;1.62452455403977e-05!GO:0006323;DNA packaging;1.79480699419866e-05!GO:0005975;carbohydrate metabolic process;1.82692668931687e-05!GO:0001726;ruffle;1.84005254567221e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.11338972829971e-05!GO:0007005;mitochondrion organization and biogenesis;2.26817224456095e-05!GO:0006613;cotranslational protein targeting to membrane;2.34522856056707e-05!GO:0000139;Golgi membrane;2.58104445566971e-05!GO:0005769;early endosome;2.84272757943073e-05!GO:0005798;Golgi-associated vesicle;2.92695722371442e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.99919630127212e-05!GO:0032940;secretion by cell;3.00337711210803e-05!GO:0031326;regulation of cellular biosynthetic process;3.70889285472209e-05!GO:0016568;chromatin modification;4.87467262308533e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.17782502988198e-05!GO:0004812;aminoacyl-tRNA ligase activity;5.17782502988198e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.17782502988198e-05!GO:0009165;nucleotide biosynthetic process;5.24078367893821e-05!GO:0003713;transcription coactivator activity;6.28154574087356e-05!GO:0043038;amino acid activation;6.2870564547394e-05!GO:0006418;tRNA aminoacylation for protein translation;6.2870564547394e-05!GO:0043039;tRNA aminoacylation;6.2870564547394e-05!GO:0044427;chromosomal part;6.6561879402121e-05!GO:0000245;spliceosome assembly;6.85114800141006e-05!GO:0006650;glycerophospholipid metabolic process;7.30082470299176e-05!GO:0007034;vacuolar transport;7.71658092503847e-05!GO:0048519;negative regulation of biological process;7.8081070849054e-05!GO:0008610;lipid biosynthetic process;8.23344479429922e-05!GO:0009967;positive regulation of signal transduction;8.32127833418264e-05!GO:0006672;ceramide metabolic process;9.17256008385286e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.41793581666872e-05!GO:0006612;protein targeting to membrane;9.43002468157231e-05!GO:0016197;endosome transport;9.55641462447726e-05!GO:0016779;nucleotidyltransferase activity;0.000101811233296422!GO:0009889;regulation of biosynthetic process;0.000108007089147594!GO:0043065;positive regulation of apoptosis;0.000120659594513704!GO:0046519;sphingoid metabolic process;0.000142806629940678!GO:0032561;guanyl ribonucleotide binding;0.000146270167818214!GO:0019001;guanyl nucleotide binding;0.000146270167818214!GO:0005885;Arp2/3 protein complex;0.000147085247750729!GO:0045786;negative regulation of progression through cell cycle;0.00015486361736172!GO:0005741;mitochondrial outer membrane;0.000160963279742385!GO:0003924;GTPase activity;0.000166040055361491!GO:0005083;small GTPase regulator activity;0.000167543161893813!GO:0043068;positive regulation of programmed cell death;0.000173460550790314!GO:0016853;isomerase activity;0.000176023411202097!GO:0000278;mitotic cell cycle;0.000184679676323875!GO:0006260;DNA replication;0.000184679676323875!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000188478493336433!GO:0019867;outer membrane;0.000192035654454596!GO:0046467;membrane lipid biosynthetic process;0.000201645911882631!GO:0045454;cell redox homeostasis;0.000217660585948987!GO:0050790;regulation of catalytic activity;0.000217749934737979!GO:0031968;organelle outer membrane;0.000243879515595585!GO:0050794;regulation of cellular process;0.000252872755244653!GO:0007265;Ras protein signal transduction;0.00025666200294528!GO:0045045;secretory pathway;0.00026101040076185!GO:0006364;rRNA processing;0.000267049926432229!GO:0016072;rRNA metabolic process;0.000270815199685937!GO:0005813;centrosome;0.000276903512398573!GO:0003724;RNA helicase activity;0.000280337298503802!GO:0046474;glycerophospholipid biosynthetic process;0.00028098500419953!GO:0006629;lipid metabolic process;0.000282572303702497!GO:0043087;regulation of GTPase activity;0.000301914389026868!GO:0043623;cellular protein complex assembly;0.000308973520064205!GO:0015980;energy derivation by oxidation of organic compounds;0.000326776017264442!GO:0019752;carboxylic acid metabolic process;0.000339144612759154!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000340111086815643!GO:0006644;phospholipid metabolic process;0.000357511263019659!GO:0005788;endoplasmic reticulum lumen;0.000381059161611724!GO:0006082;organic acid metabolic process;0.000403669178374877!GO:0008234;cysteine-type peptidase activity;0.000408428232476746!GO:0051168;nuclear export;0.000408428232476746!GO:0005099;Ras GTPase activator activity;0.000408428232476746!GO:0051336;regulation of hydrolase activity;0.00045479260755436!GO:0006897;endocytosis;0.000460870036200536!GO:0010324;membrane invagination;0.000460870036200536!GO:0030384;phosphoinositide metabolic process;0.000542253236803458!GO:0033116;ER-Golgi intermediate compartment membrane;0.00057130246871425!GO:0007041;lysosomal transport;0.000716343213202554!GO:0046489;phosphoinositide biosynthetic process;0.000741997006225713!GO:0030149;sphingolipid catabolic process;0.000760922832922623!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000785950872495947!GO:0005815;microtubule organizing center;0.000853877614059861!GO:0006333;chromatin assembly or disassembly;0.000953598437875461!GO:0005762;mitochondrial large ribosomal subunit;0.000965339349306663!GO:0000315;organellar large ribosomal subunit;0.000965339349306663!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000976457846221849!GO:0046483;heterocycle metabolic process;0.0010019721174576!GO:0006401;RNA catabolic process;0.0010333840707047!GO:0030867;rough endoplasmic reticulum membrane;0.00107397357340469!GO:0006917;induction of apoptosis;0.00108399304936814!GO:0000785;chromatin;0.00123096373392967!GO:0043021;ribonucleoprotein binding;0.00127910956243203!GO:0006366;transcription from RNA polymerase II promoter;0.00136656195996038!GO:0003729;mRNA binding;0.00138867488598606!GO:0065004;protein-DNA complex assembly;0.0014255503428899!GO:0030036;actin cytoskeleton organization and biogenesis;0.00144854313984401!GO:0012502;induction of programmed cell death;0.00150041840502704!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00157179835582664!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00157179835582664!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00157179835582664!GO:0030027;lamellipodium;0.00165835847821485!GO:0019377;glycolipid catabolic process;0.00166672658058324!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00170940152388294!GO:0051427;hormone receptor binding;0.00177764907556977!GO:0019318;hexose metabolic process;0.0018932092113654!GO:0009607;response to biotic stimulus;0.00189411926235647!GO:0051301;cell division;0.00196170272229516!GO:0008632;apoptotic program;0.00196170272229516!GO:0048522;positive regulation of cellular process;0.00206961474749545!GO:0016564;transcription repressor activity;0.00215257190917451!GO:0030176;integral to endoplasmic reticulum membrane;0.00222438153213298!GO:0005996;monosaccharide metabolic process;0.00223538124625876!GO:0006607;NLS-bearing substrate import into nucleus;0.00232359326185881!GO:0032318;regulation of Ras GTPase activity;0.00232738254111252!GO:0016563;transcription activator activity;0.0024533670306799!GO:0051789;response to protein stimulus;0.00259364585655866!GO:0006986;response to unfolded protein;0.00259364585655866!GO:0000287;magnesium ion binding;0.00259856549706323!GO:0006402;mRNA catabolic process;0.00268181700111021!GO:0008186;RNA-dependent ATPase activity;0.00271984939436336!GO:0031072;heat shock protein binding;0.00271984939436336!GO:0004197;cysteine-type endopeptidase activity;0.00275825596925656!GO:0030118;clathrin coat;0.0029278487924151!GO:0003690;double-stranded DNA binding;0.00309133547914974!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00312192967094347!GO:0035257;nuclear hormone receptor binding;0.00317726802983664!GO:0007006;mitochondrial membrane organization and biogenesis;0.00335103449867198!GO:0030984;kininogen binding;0.00345048361873293!GO:0004213;cathepsin B activity;0.00345048361873293!GO:0050662;coenzyme binding;0.00346473939528599!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00347266205344846!GO:0006310;DNA recombination;0.00354477939801919!GO:0022415;viral reproductive process;0.00363137678281647!GO:0048471;perinuclear region of cytoplasm;0.00364380870068058!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00367777001589568!GO:0042802;identical protein binding;0.00372472563458129!GO:0006891;intra-Golgi vesicle-mediated transport;0.00373924070444767!GO:0000087;M phase of mitotic cell cycle;0.00396867406771151!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00401430359311843!GO:0030041;actin filament polymerization;0.00407443248938374!GO:0002376;immune system process;0.00415314600300391!GO:0003714;transcription corepressor activity;0.00416613944048287!GO:0000314;organellar small ribosomal subunit;0.00420112442956793!GO:0005763;mitochondrial small ribosomal subunit;0.00420112442956793!GO:0004177;aminopeptidase activity;0.0042694871764889!GO:0006066;alcohol metabolic process;0.00430310449661926!GO:0022403;cell cycle phase;0.00435872298539103!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00458569901440875!GO:0016126;sterol biosynthetic process;0.00459167302076115!GO:0051252;regulation of RNA metabolic process;0.00512570974940513!GO:0046479;glycosphingolipid catabolic process;0.00516423918733907!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00519370063307927!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00519370063307927!GO:0030658;transport vesicle membrane;0.00520679902664113!GO:0022406;membrane docking;0.00525434487250264!GO:0048278;vesicle docking;0.00525434487250264!GO:0007067;mitosis;0.00526914612256413!GO:0015036;disulfide oxidoreductase activity;0.00528646533423802!GO:0043681;protein import into mitochondrion;0.00537130315168791!GO:0046822;regulation of nucleocytoplasmic transport;0.0055247484062457!GO:0019843;rRNA binding;0.00553882121965758!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00568757938832866!GO:0030029;actin filament-based process;0.00568757938832866!GO:0005905;coated pit;0.00574792515751061!GO:0048487;beta-tubulin binding;0.00585271911849783!GO:0030133;transport vesicle;0.00585992337662669!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00587760231430182!GO:0015002;heme-copper terminal oxidase activity;0.00587760231430182!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00587760231430182!GO:0004129;cytochrome-c oxidase activity;0.00587760231430182!GO:0006302;double-strand break repair;0.0060016808565205!GO:0050789;regulation of biological process;0.00601603522140884!GO:0016859;cis-trans isomerase activity;0.00603361497147907!GO:0005791;rough endoplasmic reticulum;0.00612978503116708!GO:0015631;tubulin binding;0.00623670081573701!GO:0004229;gelatinase B activity;0.0062416391574532!GO:0046466;membrane lipid catabolic process;0.00630111057445108!GO:0005048;signal sequence binding;0.00636228045247915!GO:0042158;lipoprotein biosynthetic process;0.00645505636947644!GO:0006497;protein amino acid lipidation;0.00647239288748519!GO:0006118;electron transport;0.00647239288748519!GO:0006914;autophagy;0.00655875553596896!GO:0048518;positive regulation of biological process;0.00657416512974277!GO:0031901;early endosome membrane;0.00659141830554599!GO:0009966;regulation of signal transduction;0.00659347403431204!GO:0004004;ATP-dependent RNA helicase activity;0.0066359637751029!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0066359637751029!GO:0006767;water-soluble vitamin metabolic process;0.00666593508629419!GO:0048500;signal recognition particle;0.00689777627590626!GO:0006516;glycoprotein catabolic process;0.00746314643595697!GO:0051920;peroxiredoxin activity;0.00761594108376551!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00769110793310779!GO:0006904;vesicle docking during exocytosis;0.00807307409910781!GO:0006733;oxidoreduction coenzyme metabolic process;0.00813283757455717!GO:0030663;COPI coated vesicle membrane;0.00831815478356397!GO:0030126;COPI vesicle coat;0.00831815478356397!GO:0004674;protein serine/threonine kinase activity;0.00841583375695137!GO:0015630;microtubule cytoskeleton;0.00853811777936341!GO:0005667;transcription factor complex;0.0089636946150264!GO:0006778;porphyrin metabolic process;0.00898429899064752!GO:0033013;tetrapyrrole metabolic process;0.00898429899064752!GO:0017166;vinculin binding;0.00900452994237126!GO:0006383;transcription from RNA polymerase III promoter;0.00912147775700189!GO:0016363;nuclear matrix;0.00998816899723535!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.010171059554289!GO:0000096;sulfur amino acid metabolic process;0.010302956149324!GO:0006611;protein export from nucleus;0.0103431125960314!GO:0004185;serine carboxypeptidase activity;0.0103933730467203!GO:0003725;double-stranded RNA binding;0.0108077726752778!GO:0006414;translational elongation;0.0108656099763211!GO:0048002;antigen processing and presentation of peptide antigen;0.0108656099763211!GO:0043488;regulation of mRNA stability;0.0110564471518491!GO:0043487;regulation of RNA stability;0.0110564471518491!GO:0006007;glucose catabolic process;0.0113951296571078!GO:0042168;heme metabolic process;0.0115713644887973!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0117027308184845!GO:0045047;protein targeting to ER;0.0117027308184845!GO:0000209;protein polyubiquitination;0.0123992906979146!GO:0030660;Golgi-associated vesicle membrane;0.0124409712930924!GO:0030134;ER to Golgi transport vesicle;0.0129161251942798!GO:0051235;maintenance of localization;0.0129493702518117!GO:0051287;NAD binding;0.0130112146733403!GO:0019079;viral genome replication;0.0131904666284528!GO:0006665;sphingolipid metabolic process;0.0133681661382981!GO:0030137;COPI-coated vesicle;0.0133681661382981!GO:0006769;nicotinamide metabolic process;0.0137015866053282!GO:0042613;MHC class II protein complex;0.0139049096685687!GO:0008139;nuclear localization sequence binding;0.0151486690474391!GO:0004192;cathepsin D activity;0.0151735794269731!GO:0006839;mitochondrial transport;0.015202581494524!GO:0006740;NADPH regeneration;0.0156035827582054!GO:0006098;pentose-phosphate shunt;0.0156035827582054!GO:0005869;dynactin complex;0.0158465708384344!GO:0030119;AP-type membrane coat adaptor complex;0.0159801316778086!GO:0005777;peroxisome;0.0159801316778086!GO:0042579;microbody;0.0159801316778086!GO:0044275;cellular carbohydrate catabolic process;0.0163652296691301!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0163681350086903!GO:0031625;ubiquitin protein ligase binding;0.0163681350086903!GO:0016125;sterol metabolic process;0.0165387801356956!GO:0006689;ganglioside catabolic process;0.0168138037377508!GO:0019904;protein domain specific binding;0.0168152352459154!GO:0006626;protein targeting to mitochondrion;0.0170075584506135!GO:0031324;negative regulation of cellular metabolic process;0.0175084516565473!GO:0030127;COPII vesicle coat;0.0175684115252352!GO:0012507;ER to Golgi transport vesicle membrane;0.0175684115252352!GO:0000118;histone deacetylase complex;0.0175684115252352!GO:0004518;nuclease activity;0.0175916675597714!GO:0004563;beta-N-acetylhexosaminidase activity;0.0176025938160987!GO:0044438;microbody part;0.0177390430750351!GO:0044439;peroxisomal part;0.0177390430750351!GO:0035035;histone acetyltransferase binding;0.0178023918473559!GO:0016860;intramolecular oxidoreductase activity;0.0179249490046561!GO:0006635;fatty acid beta-oxidation;0.0179788081749452!GO:0000059;protein import into nucleus, docking;0.0180172438295714!GO:0006006;glucose metabolic process;0.0180355895610939!GO:0016798;hydrolase activity, acting on glycosyl bonds;0.0181016158586674!GO:0006955;immune response;0.0187630674746495!GO:0006509;membrane protein ectodomain proteolysis;0.0187630674746495!GO:0033619;membrane protein proteolysis;0.0187630674746495!GO:0019058;viral infectious cycle;0.0189369479990033!GO:0051540;metal cluster binding;0.0189815329997767!GO:0051536;iron-sulfur cluster binding;0.0189815329997767!GO:0006695;cholesterol biosynthetic process;0.0190751669533634!GO:0003711;transcription elongation regulator activity;0.0190751669533634!GO:0030132;clathrin coat of coated pit;0.0193166330256729!GO:0051539;4 iron, 4 sulfur cluster binding;0.0204301622116762!GO:0006749;glutathione metabolic process;0.0204964937866913!GO:0007050;cell cycle arrest;0.0204964937866913!GO:0051219;phosphoprotein binding;0.0204964937866913!GO:0006506;GPI anchor biosynthetic process;0.0205850530583179!GO:0051452;cellular pH reduction;0.0208401889672885!GO:0051453;regulation of cellular pH;0.0208401889672885!GO:0045851;pH reduction;0.0208401889672885!GO:0008312;7S RNA binding;0.0216664806395326!GO:0051090;regulation of transcription factor activity;0.0218226907222236!GO:0004553;hydrolase activity, hydrolyzing O-glycosyl compounds;0.0218226907222236!GO:0005637;nuclear inner membrane;0.0218226907222236!GO:0030131;clathrin adaptor complex;0.0218226907222236!GO:0015923;mannosidase activity;0.0219199692287903!GO:0009112;nucleobase metabolic process;0.0220972860192709!GO:0019362;pyridine nucleotide metabolic process;0.0224071039875035!GO:0000339;RNA cap binding;0.0224071039875035!GO:0016408;C-acyltransferase activity;0.0224071039875035!GO:0033033;negative regulation of myeloid cell apoptosis;0.0224071039875035!GO:0001803;regulation of type III hypersensitivity;0.0224071039875035!GO:0032733;positive regulation of interleukin-10 production;0.0224071039875035!GO:0033025;regulation of mast cell apoptosis;0.0224071039875035!GO:0001805;positive regulation of type III hypersensitivity;0.0224071039875035!GO:0033023;mast cell homeostasis;0.0224071039875035!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0224071039875035!GO:0033032;regulation of myeloid cell apoptosis;0.0224071039875035!GO:0001802;type III hypersensitivity;0.0224071039875035!GO:0033028;myeloid cell apoptosis;0.0224071039875035!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0224071039875035!GO:0033026;negative regulation of mast cell apoptosis;0.0224071039875035!GO:0033024;mast cell apoptosis;0.0224071039875035!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0224742244594302!GO:0051098;regulation of binding;0.0233673907383467!GO:0050749;apolipoprotein E receptor binding;0.0234396882123779!GO:0045309;protein phosphorylated amino acid binding;0.0237422388285058!GO:0004576;oligosaccharyl transferase activity;0.0238083574261217!GO:0030518;steroid hormone receptor signaling pathway;0.0247042914904452!GO:0031903;microbody membrane;0.0253106517087103!GO:0005778;peroxisomal membrane;0.0253106517087103!GO:0006807;nitrogen compound metabolic process;0.0256593897912785!GO:0008250;oligosaccharyl transferase complex;0.0258597024722214!GO:0005684;U2-dependent spliceosome;0.0262478033448672!GO:0032787;monocarboxylic acid metabolic process;0.0262836935690129!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0264470637350416!GO:0006458;'de novo' protein folding;0.0265814920878639!GO:0051084;'de novo' posttranslational protein folding;0.0265814920878639!GO:0006661;phosphatidylinositol biosynthetic process;0.0271201582000576!GO:0008017;microtubule binding;0.0273273925146362!GO:0045185;maintenance of protein localization;0.0273273925146362!GO:0006505;GPI anchor metabolic process;0.0279705279961704!GO:0016251;general RNA polymerase II transcription factor activity;0.0281806471352148!GO:0003899;DNA-directed RNA polymerase activity;0.0284437428550229!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0289973984931291!GO:0016584;nucleosome positioning;0.0290282902686469!GO:0000279;M phase;0.0292260893722693!GO:0005758;mitochondrial intermembrane space;0.0293070285797193!GO:0030145;manganese ion binding;0.0295903598412251!GO:0006979;response to oxidative stress;0.0296197690785895!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0297117187169699!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0302812203376274!GO:0031497;chromatin assembly;0.030298506377297!GO:0008637;apoptotic mitochondrial changes;0.0304216117224905!GO:0006739;NADP metabolic process;0.0307588761165537!GO:0004218;cathepsin S activity;0.0314082483243639!GO:0051881;regulation of mitochondrial membrane potential;0.0314589641852114!GO:0006013;mannose metabolic process;0.0314589641852114!GO:0006954;inflammatory response;0.0314589641852114!GO:0006334;nucleosome assembly;0.0317357943853728!GO:0051087;chaperone binding;0.0318790464178257!GO:0006289;nucleotide-excision repair;0.0318884037707399!GO:0051223;regulation of protein transport;0.0319254829974844!GO:0030503;regulation of cell redox homeostasis;0.0322121905971132!GO:0006261;DNA-dependent DNA replication;0.0325598412336811!GO:0031301;integral to organelle membrane;0.032748751700361!GO:0006352;transcription initiation;0.0328981055403635!GO:0019747;regulation of isoprenoid metabolic process;0.0331368739317682!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0333093664830247!GO:0000303;response to superoxide;0.0342744255731168!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0343531610257779!GO:0006631;fatty acid metabolic process;0.034364318974827!GO:0050811;GABA receptor binding;0.0346168163897538!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0351853434912277!GO:0046983;protein dimerization activity;0.0355586669069564!GO:0035258;steroid hormone receptor binding;0.0357980449300533!GO:0042157;lipoprotein metabolic process;0.0360882572094481!GO:0030880;RNA polymerase complex;0.0364083743021944!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0369804061068191!GO:0046456;icosanoid biosynthetic process;0.0373180136580565!GO:0006779;porphyrin biosynthetic process;0.0373466029735421!GO:0033014;tetrapyrrole biosynthetic process;0.0373466029735421!GO:0032428;beta-N-acetylgalactosaminidase activity;0.0378738403550903!GO:0030290;sphingolipid activator protein activity;0.0378738403550903!GO:0030125;clathrin vesicle coat;0.0386671239802386!GO:0030665;clathrin coated vesicle membrane;0.0386671239802386!GO:0005784;translocon complex;0.038834506303983!GO:0006622;protein targeting to lysosome;0.0388692849013678!GO:0001784;phosphotyrosine binding;0.0392268955917074!GO:0006405;RNA export from nucleus;0.0392846121203376!GO:0000305;response to oxygen radical;0.0395958091487052!GO:0048037;cofactor binding;0.0399845575779408!GO:0001573;ganglioside metabolic process;0.0403709791737151!GO:0009892;negative regulation of metabolic process;0.0408166160809185!GO:0016788;hydrolase activity, acting on ester bonds;0.0410287960366074!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0410395219829604!GO:0065007;biological regulation;0.0410395219829604!GO:0032507;maintenance of cellular protein localization;0.0410664678309168!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0411481633417563!GO:0010257;NADH dehydrogenase complex assembly;0.0411481633417563!GO:0033108;mitochondrial respiratory chain complex assembly;0.0411481633417563!GO:0006213;pyrimidine nucleoside metabolic process;0.0415890232470804!GO:0051092;activation of NF-kappaB transcription factor;0.0416787833781729!GO:0043022;ribosome binding;0.0418064776274111!GO:0051329;interphase of mitotic cell cycle;0.0419857441548942!GO:0012506;vesicle membrane;0.0423028492593253!GO:0007021;tubulin folding;0.0425195196808043!GO:0051348;negative regulation of transferase activity;0.0425501499495961!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0429140000228148!GO:0006790;sulfur metabolic process;0.0429140000228148!GO:0006595;polyamine metabolic process;0.0429140000228148!GO:0004214;dipeptidyl-peptidase I activity;0.0439385731151862!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0442494359369581!GO:0033673;negative regulation of kinase activity;0.0446350811374809!GO:0006469;negative regulation of protein kinase activity;0.0446350811374809!GO:0000776;kinetochore;0.0457254341326302!GO:0004448;isocitrate dehydrogenase activity;0.0459587015618139!GO:0032763;regulation of mast cell cytokine production;0.0461752432255219!GO:0032762;mast cell cytokine production;0.0461752432255219!GO:0006487;protein amino acid N-linked glycosylation;0.0465062300790032!GO:0031970;organelle envelope lumen;0.0468429457128413!GO:0031124;mRNA 3'-end processing;0.0472656138971902!GO:0005832;chaperonin-containing T-complex;0.047362873238186!GO:0048468;cell development;0.0474776773570617!GO:0005819;spindle;0.0479206178407897!GO:0046578;regulation of Ras protein signal transduction;0.0480777059490156!GO:0006633;fatty acid biosynthetic process;0.0483054069242396!GO:0009116;nucleoside metabolic process;0.0483318185866533!GO:0016581;NuRD complex;0.0484657697841076!GO:0051101;regulation of DNA binding;0.04860131473429!GO:0006783;heme biosynthetic process;0.04860131473429!GO:0006376;mRNA splice site selection;0.04860131473429!GO:0000389;nuclear mRNA 3'-splice site recognition;0.04860131473429!GO:0005484;SNAP receptor activity;0.0491436949239079!GO:0046365;monosaccharide catabolic process;0.0491436949239079
|sample_id=11232
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=SREBF1,2:3.09831561731;TLX2:2.48189132438;EN1,2:1.55078913761;DMAP1_NCOR{1,2}_SMARC:1.45664623848;IRF7:1.38963132374;NANOG{mouse}:1.37278052407;NFIL3:1.32344214389;IKZF2:1.20435257384;IRF1,2:1.18864103593;SPI1:1.17170892253;RXRA_VDR{dimer}:1.16680821388;SPIB:1.16001521488;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.14202058528;FOXP3:1.0201396426;NFE2L2:1.01385546955;ELF1,2,4:0.99880034751;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.958708833325;ETS1,2:0.885785038505;MTF1:0.7126040269;TGIF1:0.696383442865;NR6A1:0.657724417338;ARID5B:0.65639988131;TFCP2:0.630222322841;FOXP1:0.614770323863;STAT1,3:0.612062174828;TFAP4:0.585194408586;PDX1:0.576098402944;FOXO1,3,4:0.557294064147;HMGA1,2:0.534335201292;AR:0.504804935629;HMX1:0.497970578835;HLF:0.490530555866;ZBTB16:0.489646688398;PAX8:0.479360585032;HNF4A_NR2F1,2:0.46181450088;ESRRA:0.45208630115;NKX2-2,8:0.409213398721;STAT2,4,6:0.399699083469;HBP1_HMGB_SSRP1_UBTF:0.362480744557;ALX1:0.349819722471;NKX3-2:0.339404922809;PAX2:0.317815212075;RUNX1..3:0.308604469194;CDX1,2,4:0.293456731439;FOXD3:0.287955564441;FOXA2:0.251086505275;PAX1,9:0.24062209068;EBF1:0.215940242108;VSX1,2:0.207716096998;MAFB:0.186326323105;POU5F1:0.179644324175;FOX{F1,F2,J1}:0.134082498478;HES1:0.131439220691;OCT4_SOX2{dimer}:0.126233192768;FOSL2:0.111084715487;PAX4:0.0856691544223;EP300:0.0836355320324;NKX2-3_NKX2-5:0.0783259623016;ESR1:0.0759532636382;CEBPA,B_DDIT3:0.0711432806756;FOX{D1,D2}:0.066167491975;NHLH1,2:0.0586211902062;CUX2:0.0345917545554;NFE2:0.0327028171116;PRRX1,2:0.0234312005202;HAND1,2:-0.0193495148705;HOXA9_MEIS1:-0.0295858654038;PRDM1:-0.0351714022794;GATA6:-0.0364943164442;GZF1:-0.0517457410192;GLI1..3:-0.059052308626;NRF1:-0.0624124897641;SMAD1..7,9:-0.0802589675067;LHX3,4:-0.0941576894117;ELK1,4_GABP{A,B1}:-0.0997459703344;FOXN1:-0.10131338893;NFKB1_REL_RELA:-0.106985523684;YY1:-0.108361985207;PITX1..3:-0.112310861187;NFIX:-0.116166372819;MYB:-0.166715247681;ZNF143:-0.172381343075;RFX2..5_RFXANK_RFXAP:-0.173679721982;STAT5{A,B}:-0.184423901167;KLF4:-0.190685529834;MYOD1:-0.191525874757;TAL1_TCF{3,4,12}:-0.194602271194;ADNP_IRX_SIX_ZHX:-0.211628491703;MYFfamily:-0.221315750291;XCPE1{core}:-0.235026145706;ZFP161:-0.242416217098;NKX6-1,2:-0.257782649903;SP1:-0.271035747038;HSF1,2:-0.275195871677;GATA4:-0.295022895747;SOX2:-0.305916405087;FOS_FOS{B,L1}_JUN{B,D}:-0.325685313978;DBP:-0.330177962546;ALX4:-0.343591801078;PPARG:-0.352200327412;TOPORS:-0.363012488564;POU1F1:-0.364898463669;CRX:-0.37071308231;BACH2:-0.372968446677;RXR{A,B,G}:-0.379419884232;HIF1A:-0.388772518683;HNF1A:-0.389584524697;PAX6:-0.390429570394;RORA:-0.390779683639;FOX{I1,J2}:-0.422954017388;GFI1B:-0.429523691067;NR3C1:-0.434330293779;ATF2:-0.438910358107;NR5A1,2:-0.441976351814;REST:-0.443288040306;TBP:-0.455029649919;BPTF:-0.471335293083;NFY{A,B,C}:-0.491318355897;ATF5_CREB3:-0.497070432106;FOXQ1:-0.503688822868;TEF:-0.525235730946;SOX{8,9,10}:-0.525852194361;SPZ1:-0.527953103298;HOX{A4,D4}:-0.53183823312;LMO2:-0.554729601735;POU3F1..4:-0.567977338934;ZNF148:-0.573698259256;MYBL2:-0.582046251488;E2F1..5:-0.583030176135;ZEB1:-0.592729355468;bHLH_family:-0.607575384784;PAX5:-0.613904756291;ZNF238:-0.618800749178;NANOG:-0.636605365167;NFE2L1:-0.659627051641;AIRE:-0.664656446074;T:-0.6674846198;NKX3-1:-0.671341374696;MAZ:-0.68054873382;ATF4:-0.691064860088;MEF2{A,B,C,D}:-0.697569948914;CREB1:-0.698854773611;PAX3,7:-0.716158703061;GFI1:-0.716179871816;EGR1..3:-0.745691456262;GTF2I:-0.750405989317;MZF1:-0.786367328602;TLX1..3_NFIC{dimer}:-0.795348149604;FOXM1:-0.813841553804;HOX{A5,B5}:-0.822087743823;TFAP2{A,C}:-0.82812447156;MED-1{core}:-0.831650307352;UFEwm:-0.83229389269;AHR_ARNT_ARNT2:-0.838568012562;SOX5:-0.846973184041;GCM1,2:-0.848467134397;SNAI1..3:-0.86080512263;GTF2A1,2:-0.862461848941;IKZF1:-0.86770233158;TFDP1:-0.870625512459;ZNF423:-0.899977163532;NFATC1..3:-0.926465083972;SOX17:-0.965016713303;RREB1:-0.98500236034;HIC1:-0.987872617537;TP53:-0.991760303258;NR1H4:-0.995127233286;CDC5L:-1.00891968862;TEAD1:-1.0141512199;TFAP2B:-1.03130282713;ONECUT1,2:-1.03882335821;BREu{core}:-1.06044457172;ZBTB6:-1.06936636519;HOX{A6,A7,B6,B7}:-1.09807847233;SRF:-1.12095581557;MTE{core}:-1.12222444646;PATZ1:-1.13251730147;EVI1:-1.20917756269;RFX1:-1.21649880544;ZNF384:-1.24116759761;POU6F1:-1.25556593739;XBP1:-1.3765358254;ATF6:-1.3924984309;JUN:-1.39494138147;PBX1:-1.40478574177;POU2F1..3:-1.46767627996;RBPJ:-1.48493116813;ZIC1..3:-1.50733258449;FOXL1:-1.56845920767;TBX4,5:-1.60113337623;LEF1_TCF7_TCF7L1,2:-1.61273751071;NKX2-1,4:-2.48286086686
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11232-116C8;search_select_hide=table117:FF:11232-116C8
}}
}}

Latest revision as of 16:26, 3 June 2020

Name:Macrophage - monocyte derived, donor1
Species:Human (Homo sapiens)
Library ID:CNhs10861
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage65 years old adult
sexmale
age65
cell typemacrophage
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberMac722
catalog number3H100-80-10
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005865
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10861 CAGE DRX008322 DRR009194
Accession ID Hg19

Library idBAMCTSS
CNhs10861 DRZ000619 DRZ002004
Accession ID Hg38

Library idBAMCTSS
CNhs10861 DRZ011969 DRZ013354
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005865
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10006.GCCAAT sRNA-Seq DRX037073 DRR041439
Accession ID Hg19

Library idBAMCTSS
SRhi10006.GCCAAT DRZ007081


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.148
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.136
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.754
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0472
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0.24
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0956
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.142
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.328
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.715
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0515
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.148
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.197
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.274
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.534
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.349
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0602
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0811
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.296
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.174
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral1.205
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.351
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.371
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.24
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.0956
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.648
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.674
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10861

Jaspar motifP-value
MA0002.25.99139e-4
MA0003.10.149
MA0004.10.168
MA0006.10.597
MA0007.10.0916
MA0009.10.453
MA0014.10.115
MA0017.10.00118
MA0018.29.25952e-4
MA0019.10.502
MA0024.10.025
MA0025.10.834
MA0027.10.607
MA0028.10.661
MA0029.10.597
MA0030.10.0612
MA0031.10.423
MA0035.20.576
MA0038.10.261
MA0039.20.106
MA0040.10.91
MA0041.10.294
MA0042.10.798
MA0043.10.0542
MA0046.10.186
MA0047.20.186
MA0048.10.386
MA0050.11.42958e-7
MA0051.10.00144
MA0052.10.038
MA0055.10.976
MA0057.10.751
MA0058.10.0124
MA0059.10.207
MA0060.13.1392e-5
MA0061.10.201
MA0062.20.00104
MA0065.20.0182
MA0066.10.173
MA0067.10.345
MA0068.10.00387
MA0069.10.376
MA0070.10.499
MA0071.10.212
MA0072.10.947
MA0073.10.43
MA0074.10.1
MA0076.10.589
MA0077.10.332
MA0078.10.409
MA0079.20.327
MA0080.21.01114e-17
MA0081.11.66935e-4
MA0083.10.00703
MA0084.10.0928
MA0087.10.722
MA0088.10.0949
MA0090.10.0345
MA0091.10.17
MA0092.10.277
MA0093.10.123
MA0099.20.446
MA0100.10.892
MA0101.10.983
MA0102.20.0118
MA0103.10.86
MA0104.20.579
MA0105.10.0101
MA0106.10.968
MA0107.10.813
MA0108.23.00047e-7
MA0111.10.403
MA0112.21.43695e-4
MA0113.10.234
MA0114.10.0196
MA0115.10.592
MA0116.11.88741e-4
MA0117.10.861
MA0119.10.526
MA0122.10.571
MA0124.10.0563
MA0125.10.877
MA0131.10.397
MA0135.10.683
MA0136.13.62102e-14
MA0137.20.044
MA0138.20.873
MA0139.10.391
MA0140.10.859
MA0141.10.0229
MA0142.10.507
MA0143.10.467
MA0144.10.0218
MA0145.10.0811
MA0146.10.0361
MA0147.10.915
MA0148.10.972
MA0149.10.0692
MA0150.10.046
MA0152.10.548
MA0153.10.0449
MA0154.10.00475
MA0155.10.983
MA0156.19.32344e-8
MA0157.10.75
MA0159.10.0556
MA0160.10.0293
MA0162.10.552
MA0163.14.29282e-6
MA0164.10.437
MA0258.10.0049
MA0259.10.676



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10861

Novel motifP-value
10.134
100.0209
1000.946
1010.254
1020.791
1030.198
1040.972
1050.486
1060.207
1070.453
1080.732
1090.0212
110.0613
1100.186
1110.0258
1120.094
1130.706
1140.03
1150.309
1160.736
1170.0233
1180.213
1190.123
120.513
1200.391
1210.568
1220.879
1230.271
1240.346
1250.363
1260.194
1270.19
1280.105
1290.639
130.036
1300.577
1310.884
1320.533
1330.842
1340.675
1350.0792
1360.749
1370.0173
1380.073
1390.0825
140.267
1400.417
1410.618
1420.183
1430.289
1440.46
1450.356
1460.834
1470.316
1480.0815
1490.516
150.178
1500.467
1510.782
1520.258
1530.886
1540.884
1550.182
1560.899
1570.773
1580.677
1590.229
160.232
1600.535
1610.658
1620.625
1630.71
1640.186
1650.268
1660.752
1670.558
1680.722
1690.0052
170.238
180.375
190.159
20.944
200.831
210.433
220.18
230.336
240.069
250.521
260.0847
270.197
280.641
290.226
30.0191
300.605
310.581
320.658
330.446
340.24
350.397
360.14
370.112
380.0635
390.772
40.995
400.147
410.286
420.414
430.0845
440.0923
450.71
460.193
470.265
480.196
490.205
50.289
500.792
510.565
520.366
530.226
540.417
550.0584
560.558
570.562
580.141
590.179
60.208
600.118
610.153
620.134
630.286
640.279
650.0823
660.981
670.338
680.946
690.582
70.202
700.0194
710.0582
720.189
730.0376
740.878
750.0168
760.216
770.224
780.0604
790.255
80.134
800.408
810.253
820.142
830.974
840.465
850.0604
860.0546
870.0929
880.244
890.152
90.412
900.0228
910.749
920.0962
930.859
940.0949
950.149
960.243
970.867
980.463
990.746



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10861


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000235 (macrophage)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000086 (human macrophage sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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