FF:11339-117F7: Difference between revisions

Latest revision as of 17:53, 4 June 2020

Name:	Chondrocyte - re diff, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs11373
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	cartilage
dev stage	60 years old adult
sex	male
age	60
cell type	chondrocyte
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1662
catalog number	CA402RD-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005779

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11373		CAGE		DRX008204		DRR009076

Accession ID Hg19

Library id		BAM		CTSS
CNhs11373		DRZ000501		DRZ001886

Accession ID Hg38

Library id		BAM		CTSS
CNhs11373		DRZ011851		DRZ013236

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

RNA-Seq Accession numbers

Method		Sample accession id
sRNA-Seq		SAMD00005779

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
SRhi10012.CTTGTA		sRNA-Seq		DRX037191		DRR041557

Accession ID Hg19

Library id		BAM		CTSS
SRhi10012.CTTGTA		DRZ007199

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.216
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.168
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0983
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.23
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.254
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0397
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.176
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.254
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0.413
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0869
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.867
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.254
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0458
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0608
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0548
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.575
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.254
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	1.137
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.912
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.53
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.53
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.621
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.952
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11373

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.314
MA0003.1	MA0003.1	0.216
MA0004.1	MA0004.1	0.0529
MA0006.1	MA0006.1	0.194
MA0007.1	MA0007.1	0.508
MA0009.1	MA0009.1	0.125
MA0014.1	MA0014.1	0.13
MA0017.1	MA0017.1	0.767
MA0018.2	MA0018.2	0.00229
MA0019.1	MA0019.1	0.83
MA0024.1	MA0024.1	0.166
MA0025.1	MA0025.1	0.063
MA0027.1	MA0027.1	0.715
MA0028.1	MA0028.1	0.262
MA0029.1	MA0029.1	0.105
MA0030.1	MA0030.1	0.464
MA0031.1	MA0031.1	0.554
MA0035.2	MA0035.2	0.00196
MA0038.1	MA0038.1	0.546
MA0039.2	MA0039.2	0.0466
MA0040.1	MA0040.1	0.9
MA0041.1	MA0041.1	0.449
MA0042.1	MA0042.1	0.963
MA0043.1	MA0043.1	0.0111
MA0046.1	MA0046.1	0.906
MA0047.2	MA0047.2	0.212
MA0048.1	MA0048.1	0.927
MA0050.1	MA0050.1	0.00104
MA0051.1	MA0051.1	0.0497
MA0052.1	MA0052.1	0.465
MA0055.1	MA0055.1	0.478
MA0057.1	MA0057.1	0.528
MA0058.1	MA0058.1	0.0698
MA0059.1	MA0059.1	0.687
MA0060.1	MA0060.1	0.0283
MA0061.1	MA0061.1	0.744
MA0062.2	MA0062.2	0.00101
MA0065.2	MA0065.2	0.798
MA0066.1	MA0066.1	0.876
MA0067.1	MA0067.1	0.077
MA0068.1	MA0068.1	0.14
MA0069.1	MA0069.1	0.117
MA0070.1	MA0070.1	0.587
MA0071.1	MA0071.1	0.719
MA0072.1	MA0072.1	0.96
MA0073.1	MA0073.1	0.333
MA0074.1	MA0074.1	0.954
MA0076.1	MA0076.1	0.0846
MA0077.1	MA0077.1	0.104
MA0078.1	MA0078.1	0.965
MA0079.2	MA0079.2	0.294
MA0080.2	MA0080.2	0.00805
MA0081.1	MA0081.1	0.135
MA0083.1	MA0083.1	0.768
MA0084.1	MA0084.1	0.443
MA0087.1	MA0087.1	0.476
MA0088.1	MA0088.1	0.622
MA0090.1	MA0090.1	0.369
MA0091.1	MA0091.1	0.0582
MA0092.1	MA0092.1	0.104
MA0093.1	MA0093.1	0.0904
MA0099.2	MA0099.2	8.60763e-4
MA0100.1	MA0100.1	0.888
MA0101.1	MA0101.1	0.662
MA0102.2	MA0102.2	0.0897
MA0103.1	MA0103.1	0.00288
MA0104.2	MA0104.2	0.0993
MA0105.1	MA0105.1	0.177
MA0106.1	MA0106.1	0.948
MA0107.1	MA0107.1	0.645
MA0108.2	MA0108.2	0.00632
MA0111.1	MA0111.1	0.311
MA0112.2	MA0112.2	7.03694e-4
MA0113.1	MA0113.1	0.172
MA0114.1	MA0114.1	0.671
MA0115.1	MA0115.1	0.39
MA0116.1	MA0116.1	0.0375
MA0117.1	MA0117.1	0.761
MA0119.1	MA0119.1	0.486
MA0122.1	MA0122.1	0.727
MA0124.1	MA0124.1	0.736
MA0125.1	MA0125.1	0.404
MA0131.1	MA0131.1	0.34
MA0135.1	MA0135.1	0.453
MA0136.1	MA0136.1	0.0534
MA0137.2	MA0137.2	0.109
MA0138.2	MA0138.2	0.282
MA0139.1	MA0139.1	0.644
MA0140.1	MA0140.1	0.194
MA0141.1	MA0141.1	0.674
MA0142.1	MA0142.1	0.25
MA0143.1	MA0143.1	0.905
MA0144.1	MA0144.1	0.315
MA0145.1	MA0145.1	0.03
MA0146.1	MA0146.1	0.745
MA0147.1	MA0147.1	0.21
MA0148.1	MA0148.1	0.0563
MA0149.1	MA0149.1	0.636
MA0150.1	MA0150.1	0.943
MA0152.1	MA0152.1	3.60193e-5
MA0153.1	MA0153.1	0.2
MA0154.1	MA0154.1	0.0269
MA0155.1	MA0155.1	0.268
MA0156.1	MA0156.1	0.0359
MA0157.1	MA0157.1	0.779
MA0159.1	MA0159.1	0.4
MA0160.1	MA0160.1	0.79
MA0162.1	MA0162.1	0.236
MA0163.1	MA0163.1	1.07245e-4
MA0164.1	MA0164.1	0.583
MA0258.1	MA0258.1	0.27
MA0259.1	MA0259.1	0.393

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11373

Novel motif	Logo	P-value
1	1	0.58
10	10	0.855
100	100	0.459
101	101	0.88
102	102	0.159
103	103	0.0134
104	104	0.449
105	105	0.0042
106	106	0.267
107	107	0.0195
108	108	0.975
109	109	0.675
11	11	0.379
110	110	0.641
111	111	0.826
112	112	0.34
113	113	0.495
114	114	0.23
115	115	0.859
116	116	0.119
117	117	0.396
118	118	0.238
119	119	0.867
12	12	0.944
120	120	0.886
121	121	0.412
122	122	0.2
123	123	0.121
124	124	0.59
125	125	0.815
126	126	0.892
127	127	0.959
128	128	0.0339
129	129	0.854
13	13	0.596
130	130	0.652
131	131	0.11
132	132	0.811
133	133	0.61
134	134	0.324
135	135	0.178
136	136	0.0595
137	137	0.896
138	138	0.562
139	139	0.456
14	14	0.482
140	140	0.55
141	141	0.366
142	142	0.301
143	143	0.466
144	144	0.336
145	145	0.862
146	146	0.234
147	147	0.815
148	148	0.487
149	149	0.00526
15	15	0.0848
150	150	0.57
151	151	0.415
152	152	0.277
153	153	0.819
154	154	0.776
155	155	0.223
156	156	0.985
157	157	0.755
158	158	0.053
159	159	0.292
16	16	0.0608
160	160	0.874
161	161	0.552
162	162	0.812
163	163	0.577
164	164	0.401
165	165	0.415
166	166	0.0163
167	167	0.86
168	168	0.63
169	169	0.0113
17	17	0.634
18	18	0.19
19	19	0.0294
2	2	0.156
20	20	0.0459
21	21	0.462
22	22	0.172
23	23	0.0557
24	24	0.775
25	25	0.731
26	26	0.998
27	27	0.248
28	28	0.92
29	29	0.924
3	3	0.461
30	30	0.263
31	31	0.783
32	32	1.81672e-7
33	33	0.834
34	34	0.166
35	35	0.501
36	36	0.687
37	37	0.539
38	38	0.563
39	39	0.275
4	4	0.448
40	40	0.969
41	41	0.717
42	42	0.929
43	43	0.326
44	44	0.734
45	45	0.306
46	46	0.254
47	47	0.939
48	48	0.586
49	49	0.546
5	5	0.144
50	50	0.898
51	51	0.586
52	52	0.336
53	53	0.787
54	54	0.591
55	55	0.356
56	56	0.882
57	57	0.643
58	58	0.916
59	59	0.0187
6	6	0.295
60	60	0.137
61	61	0.696
62	62	0.32
63	63	0.482
64	64	0.959
65	65	0.282
66	66	0.853
67	67	0.383
68	68	0.678
69	69	0.559
7	7	0.178
70	70	0.356
71	71	0.141
72	72	0.662
73	73	0.481
74	74	0.304
75	75	0.966
76	76	0.666
77	77	0.00168
78	78	0.714
79	79	0.00692
8	8	0.486
80	80	0.237
81	81	0.497
82	82	0.27
83	83	0.667
84	84	0.404
85	85	0.071
86	86	0.213
87	87	0.556
88	88	0.223
89	89	0.131
9	9	0.082
90	90	0.566
91	91	0.38
92	92	0.106
93	93	0.0589
94	94	0.41
95	95	0.413
96	96	0.247
97	97	0.0885
98	98	0.967
99	99	0.187

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11373

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000245 human chondrocyte re-differentiated sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000153 (GAG secreting cell)
0000667 (collagen secreting cell)
0000327 (extracellular matrix secreting cell)
0000447 (carbohydrate secreting cell)
0000255 (eukaryotic cell)
0000138 (chondrocyte)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000037 (human chondrocyte sample)
0000245 (human chondrocyte re-differentiated sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005779
+|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005779
+|accession_numbers=CAGE;DRX008204;DRR009076;DRZ000501;DRZ001886;DRZ011851;DRZ013236
+|accession_numbers_RNASeq=sRNA-Seq;DRX037191;DRR041557;DRZ007199
 |ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000055,CL:0000144,CL:0000723,CL:0000048,CL:0000548,CL:0000034,CL:0000151,CL:0000012,CL:0002320,CL:0000063,CL:0002371,CL:0000219,CL:0000499,CL:0000153,CL:0000667,CL:0000327,CL:0000447,CL:0000004,CL:0000134,CL:0000255,CL:0000058,CL:0000138
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0002320,CL:0002371,CL:0000499,CL:0000153,CL:0000667,CL:0000327,CL:0000447,CL:0000255,CL:0000138
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000037,FF:0000245
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.85!77.94!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!1.67!956.73!AEBP1;;chr12:24102576..24102623,-!p2@SOX5!1.65!43.74!SOX5;;chr7:44143978..44143989,+!p2@AEBP1!1.58!66.80!AEBP1;;chr7:44143997..44144008,+!p3@AEBP1!1.52!40.56!AEBP1;;chr1:170633348..170633399,+!p2@PRRX1!1.49!40.56!PRRX1;;chr11:125034640..125034655,+!p1@PKNOX2!1.48!29.43!PKNOX2;;chr20:39317868..39317884,-!p1@MAFB!1.40!277.55!MAFB;;chr20:6748325..6748352,+!p1@BMP2!1.37!31.81!BMP2;;chr1:170632250..170632277,+!p7@PRRX1!1.37!22.27!PRRX1;;chr1:44513995..44514031,+!p1@KLF17!1.30!19.09!KLF17;;chr12:54380404..54380433,+!p3@HOXC10!1.30!19.09!HOXC10;;chr9:96717629..96717644,-!p1@BARX1!1.25!16.70!BARX1;;chr17:48072574..48072597,-!p1@DLX3!1.21!15.11!DLX3;;chr5:134369905..134369972,-!p1@PITX1!1.18!21.47!PITX1;;chr1:170633262..170633285,+!p3@PRRX1!1.17!15.91!PRRX1;;chr3:71630980..71631110,-!p3@FOXP1!1.16!46.92!FOXP1;;chr21:36260295..36260310,-!p3@RUNX1!1.16!21.47!RUNX1;;chr5:134369879..134369898,-!p2@PITX1!1.16!13.52!PITX1;;chr7:96654133..96654150,-!p1@DLX5!1.16!13.52!DLX5;;chr17:70117153..70117174,+!p1@SOX9!1.15!133.61!SOX9;;chr2:102091566..102091581,-!p1@RFX8!1.14!12.72!RFX8;;chr3:21792682..21792720,-!p1@ZNF385D!1.14!12.72!ZNF385D;;chr8:116681409..116681431,-!p2@TRPS1!1.12!33.40!TRPS1;;chr8:116680215..116680245,-!p6@TRPS1!1.12!19.09!TRPS1;;chr12:48298765..48298783,-!p2@VDR!1.11!24.65!VDR;;chr18:22932080..22932170,-!p1@ZNF521!1.10!49.31!ZNF521;;chrY:21906594..21906622,-!p1@KDM5D!1.08!11.13!KDM5D;;chr21:40032558..40032578,-!p5@ERG!1.08!11.13!ERG;;chr11:46299199..46299233,+!p1@CREB3L1!1.04!51.69!CREB3L1;;chr18:77155922..77155939,+!p1@NFATC1!1.04!27.84!NFATC1;;chr2:102091478..102091490,-!p3@RFX8!1.02!9.54!RFX8;;chr1:170632723..170632739,+!p8@PRRX1!1.02!9.54!PRRX1;;chr21:40033695..40033712,-!p6@ERG!1.02!9.54!ERG;;chr3:21792585..21792625,-!p2@ZNF385D!1.01!10.34!ZNF385D;;chr20:30433396..30433414,-!p1@FOXS1!0.99!8.75!FOXS1;;chr21:40032581..40032605,-!p4@ERG!0.99!8.75!ERG;;chr12:24103844..24103880,-!p3@SOX5!0.99!8.75!SOX5;;chr12:54379029..54379057,+!p2@HOXC10!0.99!8.75!HOXC10;;chr7:27196267..27196311,-!p1@HOXA7!0.99!8.75!HOXA7;;chr19:13134772..13134822,+!p2@NFIX!0.98!12.72!NFIX;;chr1:170632959..170632987,+!p4@PRRX1!0.95!8.75!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.95!7.95!PRRX1;;chr21:40032884..40032915,-!p2@ERG!0.95!7.95!ERG;;chr8:116673894..116673913,-!p12@TRPS1!0.95!7.95!TRPS1;;chr12:54378923..54378966,+!p1@HOXC10!0.95!7.95!HOXC10;;chr21:36260343..36260402,-!p6@RUNX1!0.94!12.72!RUNX1;;chr9:16870659..16870675,-!p2@BNC2!0.94!9.54!BNC2;;chr3:5021268..5021282,+!p4@BHLHE40!0.93!15.91!BHLHE40;;chr11:46299539..46299620,+!p2@CREB3L1!0.92!12.72!CREB3L1;;chr21:36259445..36259519,-!p4@RUNX1!0.91!20.68!RUNX1;;chr3:21792790..21792824,-!p4@ZNF385D!0.91!7.16!ZNF385D;;chr17:59529743..59529798,+!p1@TBX4!0.91!7.16!TBX4;;chr7:27205136..27205164,-!p1@HOXA9!0.91!7.16!HOXA9;;chr7:96654026..96654061,-!p2@DLX5!0.91!7.16!DLX5;;chr15:42749722..42749739,-!p2@ZFP106!0.90!12.72!ZFP106;;chr18:53068911..53068935,-!p4@TCF4!0.90!7.95!TCF4;;chr12:66218255..66218304,+!p3@HMGA2!0.89!19.09!HMGA2;;chr12:48298785..48298828,-!p1@VDR!0.87!35.79!VDR;;chr19:13134457..13134462,+!p5@NFIX!0.87!11.93!NFIX;;chr3:21792631..21792665,-!p3@ZNF385D!0.87!6.36!ZNF385D;;chr1:2985760..2985774,+!p1@PRDM16!0.87!6.36!PRDM16;;chr11:125034605..125034636,+!p2@PKNOX2!0.87!6.36!PKNOX2;;chr7:27205106..27205134,-!p2@HOXA9!0.87!6.36!HOXA9;;chr7:27224842..27224872,-!p1@HOXA11!0.87!6.36!HOXA11;;chr8:49833948..49833973,-!p2@SNAI2!0.85!41.35!SNAI2;;chr3:71631382..71631413,-!p20@FOXP1!0.85!7.16!FOXP1;;chr8:49833978..49833996,-!p1@SNAI2!0.84!130.43!SNAI2;;chr12:96588368..96588394,+!p3@ELK3!0.84!16.70!ELK3;;chr9:132427972..132428056,+!p1@PRRX2!0.84!7.95!PRRX2;;chr3:157823517..157823562,-!p1@SHOX2!0.84!6.36!SHOX2;;chr13:45010939..45011033,-!p1@TSC22D1!0.83!406.39!TSC22D1;;chr21:36260463..36260480,-!p9@RUNX1!0.83!7.95!RUNX1;;chr5:124082322..124082364,-!p1@ZNF608!0.82!15.11!ZNF608;;chr7:77428227..77428242,+!p3@PHTF2!0.82!8.75!PHTF2;;chr3:71631151..71631194,-!p15@FOXP1!0.82!6.36!FOXP1;;chr18:46475696..46475713,-!p1@SMAD7!0.82!6.36!SMAD7;;chr19:13135386..13135435,+!p4@NFIX!0.82!5.57!NFIX;;chr7:27196217..27196246,-!p2@HOXA7!0.82!5.57!HOXA7;;chr12:54393880..54393962,+!p1@HOXC9!0.82!5.57!HOXC9;;chr14:61116183..61116208,-!p1@SIX1!0.81!22.27!SIX1;;chr7:77428149..77428220,+!p1@PHTF2!0.80!58.06!PHTF2;;chr12:66218598..66218645,+!p2@HMGA2!0.80!26.24!HMGA2;;chr21:36260980..36261011,-!p1@RUNX1!0.79!162.24!RUNX1;;chr12:53614115..53614154,-!p1@RARG!0.78!29.43!RARG;;chr6:1610293..1610310,+!p1@FOXC1!0.78!8.75!FOXC1;;chr7:101459263..101459310,+!p1@CUX1!0.77!316.52!CUX1;;chr20:48599506..48599526,+!p1@SNAI1!0.77!34.20!SNAI1;;chr7:14029283..14029311,-!p1@ETV1!0.77!28.63!ETV1;;chr7:27224795..27224840,-!p2@HOXA11!0.76!4.77!HOXA11;;chr16:31076332..31076388,-!p3@ZNF668!0.76!4.77!ZNF668;;chr18:22932004..22932021,-!p2@ZNF521!0.76!4.77!ZNF521;;chr9:132427883..132427951,+!p2@PRRX2!0.76!4.77!PRRX2;;chr1:170632683..170632696,+!p12@PRRX1!0.76!4.77!PRRX1;;chr21:40033882..40033887,-!p21@ERG!0.76!4.77!ERG;;chr10:119303078..119303169,+!p2@EMX2!0.76!4.77!EMX2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.76!4.77!HOXC5;;chr19:13136130..13136165,+!p6@NFIX!0.75!6.36!NFIX;;chr3:5021113..5021180,+!p1@BHLHE40!0.74!347.54!BHLHE40;;chr10:64134120..64134183,+!p1@ZNF365!0.74!5.57!ZNF365;;chr5:88178983..88179012,-!p1@MEF2C!0.73!37.38!MEF2C;;chr10:64576105..64576133,-!p1@EGR2!0.73!9.54!EGR2;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.73!4.77!GLIS1;;chr6:21593973..21593988,+!p1@SOX4!0.72!171.78!SOX4;;chr18:52989565..52989623,-!p9@TCF4!0.72!5.57!TCF4;;chr16:86600426..86600441,+!p1@FOXC2!0.71!11.13!FOXC2;;chr3:170076314..170076334,+!p2@SKIL!0.71!5.57!SKIL;;chr19:45908292..45908374,-!p1@PPP1R13L!0.70!40.56!PPP1R13L;;chr15:57511609..57511651,+!p2@TCF12!0.70!7.16!TCF12;;chr18:45935720..45935772,-!p1@ZBTB7C!0.70!3.98!ZBTB7C;;chr19:13136057..13136085,+!p11@NFIX!0.70!3.98!NFIX;;chr1:119530857..119530884,-!p4@TBX15!0.70!3.98!TBX15;;chr1:170632310..170632321,+!p15@PRRX1!0.70!3.98!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.70!3.98!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.70!3.98!PRRX1;;chr21:36260325..36260341,-!p14@RUNX1!0.70!3.98!RUNX1;;chr2:45236540..45236577,-!p1@SIX2!0.70!3.98!SIX2;;chr3:5022272..5022321,+!p7@BHLHE40!0.70!3.98!BHLHE40;;chr4:109088940..109089037,-!p4@LEF1!0.70!3.98!LEF1;;chr4:109089095..109089144,-!p6@LEF1!0.70!3.98!LEF1;;chr11:125034586..125034604,+!p3@PKNOX2!0.70!3.98!PKNOX2;;chr12:24103957..24103972,-!p5@SOX5!0.70!3.98!SOX5;;chr12:54402745..54402788,+!p1@HOXC8!0.70!3.98!HOXC8;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.70!3.98!HOXC5;;chrY:2803415..2803468,+!p1@ZFY!0.70!3.98!ZFY;;chr13:41240717..41240735,-!p2@FOXO1!0.69!30.22!FOXO1;;chr7:137686763..137686784,-!p5@CREB3L2!0.69!7.16!CREB3L2;;chr14:62162285..62162296,+!p3@HIF1A!0.68!22.27!HIF1A;;chr6:21597765..21597779,+!p2@SOX4!0.67!34.20!SOX4;;chr10:114710098..114710130,+!p2@TCF7L2!0.66!31.02!TCF7L2;;chr2:239756739..239756755,+!p2@TWIST2!0.65!6.36!TWIST2;;chr7:101459230..101459243,+!p2@CUX1!0.64!19.09!CUX1;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.64!7.95!ZNF395;;chr18:53257001..53257015,-!p5@TCF4!0.64!6.36!TCF4;;chr1:23885981..23886002,-!p1@ID3!0.63!681.56!ID3;;chr5:178368186..178368238,+!p1@ZNF454!0.63!6.36!ZNF454;;chr11:65667884..65667895,-!p2@FOSL1!0.62!14.32!FOSL1;;chr8:22550982..22550999,-!p1@EGR3!0.62!10.34!EGR3;;chr8:145159846..145159889,+!p6@MAF1!0.62!4.77!MAF1;;chr5:124082279..124082319,-!p3@ZNF608!0.62!3.98!ZNF608;;chr8:116681878..116681893,-!p15@TRPS1!0.62!3.18!TRPS1;;chr1:170632137..170632172,+!p10@PRRX1!0.62!3.18!PRRX1;;chr1:170632439..170632465,+!p11@PRRX1!0.62!3.18!PRRX1;;chr1:197886461..197886558,+!p1@LHX9!0.62!3.18!LHX9;;chr21:38071430..38071456,+!p1@SIM2!0.62!3.18!SIM2;;chr2:45236579..45236596,-!p2@SIX2!0.62!3.18!SIX2;;chr12:54378984..54378996,+!p7@HOXC10!0.62!3.18!HOXC10;;chr12:54380036..54380091,+!p4@HOXC10!0.62!3.18!HOXC10;;chr12:54394309..54394336,+!p2@HOXC9!0.62!3.18!HOXC9;;chr12:54402790..54402805,+!p2@HOXC8!0.62!3.18!HOXC8;;chr12:66218923..66218934,+!p14@HMGA2!0.62!3.18!HMGA2;;chr9:130966497..130966541,-!p4@CIZ1!0.62!3.18!CIZ1;;chr12:54772960..54773015,-!p3@ZNF385A!0.61!17.50!ZNF385A;;chr19:44037546..44037594,+!p1@ZNF575!0.61!7.16!ZNF575;;chr15:100106670..100106697,+!p4@MEF2A!0.61!5.57!MEF2A;;chr5:321810..321877,+!p1@AHRR!0.60!11.13!AHRR;;chr4:4861385..4861398,+!p1@MSX1!0.60!10.34!MSX1;;chr11:65430554..65430579,-!p3@RELA!0.60!8.75!RELA;;chr8:72756267..72756296,-!p4@MSC!0.60!4.77!MSC;;chr9:2158443..2158481,+!p2@SMARCA2!0.59!9.54!SMARCA2;;chr7:150946015..150946070,-!p3@SMARCD3!0.59!7.16!SMARCD3;;chr18:52989081..52989117,-!p7@TCF4!0.59!4.77!TCF4;;chr12:66218152..66218174,+!p10@HMGA2!0.59!3.18!HMGA2;;chr12:124873357..124873401,-!p1@NCOR2!0.58!39.76!NCOR2;;chr1:164528445..164528459,+!p2@PBX1!0.58!10.34!PBX1;;chr19:12203100..12203132,+!p1@ZNF788!0.58!6.36!ZNF788;;chr19:31840130..31840160,-!p2@TSHZ3!0.58!4.77!TSHZ3;;chr3:71632743..71632756,-!p16@FOXP1!0.58!4.77!FOXP1;;chr7:28725740..28725778,+!p1@CREB5!0.57!30.22!CREB5;;chr5:133450365..133450444,+!p1@TCF7!0.57!15.11!TCF7;;chr3:114343768..114343822,-!p1@ZBTB20!0.57!14.32!ZBTB20;;chr6:15246200..15246214,+!p2@JARID2!0.57!8.75!JARID2;;chr2:74229812..74229867,+!p1@TET3!0.57!7.95!TET3;;chr16:73093174..73093209,-!p3@ZFHX3!0.57!3.98!ZFHX3;;chr7:44143738..44143760,+!p4@AEBP1!0.57!3.18!AEBP1;;chr3:5022174..5022207,+!p8@BHLHE40!0.56!3.18!BHLHE40;;chr22:24093267..24093327,-!p1@ZNF70!0.55!21.47!ZNF70;;chr4:146859927..146860055,-!p1@ZNF827!0.55!19.09!ZNF827;;chrX:129402768..129402796,-!p2@ZNF280C!0.55!9.54!ZNF280C;;chr16:54964740..54964789,+!p1@IRX5!0.55!3.98!IRX5;;chr5:92919068..92919082,+!p5@NR2F1!0.55!3.18!NR2F1;;chr10:114709999..114710031,+!p1@TCF7L2!0.54!73.96!TCF7L2;;chr3:71114066..71114114,-!p1@FOXP1!0.54!63.62!FOXP1;;chr12:96588143..96588185,+!p1@ELK3!0.54!38.17!ELK3;;chr3:5021191..5021202,+!p3@BHLHE40!0.54!7.95!BHLHE40;;chr2:121493425..121493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KLF10;;chr8:106330515..106330525,+!p6@ZFPM2!0.25!0.80!ZFPM2;;chr8:106330848..106330859,+!p5@ZFPM2!0.25!0.80!ZFPM2;;chr8:22550700..22550717,-!p4@EGR3!0.25!0.80!EGR3;;chr8:65492433..65492440,+!p6@BHLHE22!0.25!0.80!BHLHE22;;chr8:65492520..65492554,+!p3@BHLHE22!0.25!0.80!BHLHE22;;chr8:72755987..72756002,-!p7@MSC!0.25!0.80!MSC;;chr8:72756251..72756262,-!p12@MSC!0.25!0.80!MSC;;chr8:72756380..72756427,-!p8@MSC!0.25!0.80!MSC;;chr8:81787006..81787031,-!p2@ZNF704!0.25!0.80!ZNF704;;chr9:115819058..115819082,-!p2@ZFP37!0.25!0.80!ZFP37;;chr14:75746705..75746720,+!p8@FOS!0.25!0.80!FOS;;chr14:75988831..75988847,+!p2@BATF!0.25!0.80!BATF;;chr15:31684663..31684717,+!p10@KLF13!0.25!0.80!KLF13;;chr15:35280823..35280852,-!p6@ZNF770!0.25!0.80!ZNF770;;chr15:57025732..57025743,-!p6@ZNF280D!0.25!0.80!ZNF280D;;chr15:57212102..57212120,+!p18@TCF12!0.25!0.80!TCF12;;chr15:66994718..66994729,+!p4@SMAD6!0.25!0.80!SMAD6;;chr15:66994885..66994904,+!p7@SMAD6!0.25!0.80!SMAD6;;chr15:67391010..67391046,+!p13@SMAD3!0.25!0.80!SMAD3;;chr15:80696666..80696700,+!p4@ARNT2!0.25!0.80!ARNT2;;chr16:1031762..1031781,+!p1@SOX8!0.25!0.80!SOX8;;chr16:29819558..29819572,+!p28@MAZ!0.25!0.80!MAZ;;chr16:30538376..30538386,-!p8@ZNF768!0.25!0.80!ZNF768;;chr16:54964899..54964914,+!p2@IRX5!0.25!0.80!IRX5;;chr16:73093210..73093223,-!p13@ZFHX3!0.25!0.80!ZFHX3;;chr16:79633883..79633892,-!p6@MAF!0.25!0.80!MAF;;chr16:79634581..79634592,-!p4@MAF!0.25!0.80!MAF;;chr16:86600458..86600461,+!p3@FOXC2!0.25!0.80!FOXC2;;chr17:40719286..40719299,+!p6@MLX!0.25!0.80!MLX;;chr17:46128217..46128243,+!p11@NFE2L1!0.25!0.80!NFE2L1;;chr17:46621146..46621180,-!p10@HOXB2!0.25!0.80!HOXB2;;chr17:48072063..48072074,-!p5@DLX3!0.25!0.80!DLX3;;chr17:48072421..48072424,-!p2@DLX3!0.25!0.80!DLX3;;chr17:5026405..5026422,-!p2@ZNF232!0.25!0.80!ZNF232;;chr17:79881433..79881452,-!p6@MAFG!0.25!0.80!MAFG;;chr18:19749504..19749515,+!p5@GATA6!0.25!0.80!GATA6;;chr18:42260840..42260860,+!p2@SETBP1!0.25!0.80!SETBP1;;chr18:42260920..42260951,+!p4@SETBP1!0.25!0.80!SETBP1;;chr18:46476499..46476507,-!p3@SMAD7!0.25!0.80!SMAD7;;chr18:52988952..52988965,-!p23@TCF4!0.25!0.80!TCF4;;chr18:52988979..52988993,-!p18@TCF4!0.25!0.80!TCF4;;chr18:52989415..52989429,-!p63@TCF4!0.25!0.80!TCF4;;chr18:53070846..53070902,-!p6@TCF4!0.25!0.80!TCF4;;chr18:53089493..53089517,-!p15@TCF4!0.25!0.80!TCF4;;chr18:53089521..53089533,-!p22@TCF4!0.25!0.80!TCF4;;chr18:53253297..53253322,-!p30@TCF4!0.25!0.80!TCF4;;chr18:53255323..53255332,-!p31@TCF4!0.25!0.80!TCF4;;chr18:53255349..53255358,-!p29@TCF4!0.25!0.80!TCF4;;chr19:12267492..12267505,-!p2@ZNF625,p3@ZNF20!0.25!0.80!ZNF625;;chr19:12595565..12595576,-!p3@ZNF709!0.25!0.80!ZNF709;;chr19:13135369..13135375,+!p21@NFIX!0.25!0.80!NFIX;;chr19:13135731..13135787,+!p10@NFIX!0.25!0.80!NFIX;;chr19:13135790..13135804,+!p26@NFIX!0.25!0.80!NFIX;;chr19:13135989..13136023,+!p18@NFIX!0.25!0.80!NFIX;;chr19:19976620..19976631,+!p4@ZNF253!0.25!0.80!ZNF253;;chr19:31840168..31840186,-!p6@TSHZ3!0.25!0.80!TSHZ3;;chr19:35454968..35454984,-!p3@ZNF792!0.25!0.80!ZNF792;;chr1:43148059..43148108,+!p1@YBX1!0.24!101.80!YBX1;;chr10:31608127..31608156,+!p1@ZEB1!0.24!28.63!ZEB1;;chr7:137686824..137686865,-!p2@CREB3L2!0.24!19.09!CREB3L2;;chr1:41157421..41157482,+!p2@NFYC!0.24!17.50!NFYC;;chr19:11708259..11708309,+!p1@ZNF627!0.24!15.11!ZNF627;;chr12:2986275..2986363,-!p1@FOXM1!0.24!15.11!FOXM1;;chr19:57901208..57901280,+!p1@ZNF548!0.24!11.93!ZNF548;;chr19:58427951..58427984,-!p1@ZNF417!0.24!10.34!ZNF417;;chr7:77428066..77428132,+!p2@PHTF2!0.24!9.54!PHTF2;;chr4:140005443..140005527,-!p2@ELF2!0.24!8.75!ELF2;;
+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000138;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000153;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000327;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000499
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 44: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Chondrocyte%2520-%2520re%2520diff%252c%2520donor2.CNhs11373.11339-117F7.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Chondrocyte%2520-%2520re%2520diff%252c%2520donor2.CNhs11373.11339-117F7.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Chondrocyte%2520-%2520re%2520diff%252c%2520donor2.CNhs11373.11339-117F7.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Chondrocyte%2520-%2520re%2520diff%252c%2520donor2.CNhs11373.11339-117F7.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Chondrocyte%2520-%2520re%2520diff%252c%2520donor2.CNhs11373.11339-117F7.hg38.nobarcode.ctss.bed.gz
 |id=FF:11339-117F7
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000245
+|is_a=EFO:0002091;;FF:0000245
+|is_obsolete=
+|library_id=CNhs11373
+|library_id_phase_based=2:CNhs11373
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11339
+|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10012.CTTGTA.11339
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11339
+|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10012.CTTGTA.11339
 |name=Chondrocyte - re diff, donor2
 |namespace=FANTOM5
@@ Line 42: / Line 65: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11373,LSID771,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=SRhi10012,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
+|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.0206996668315949,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.190887245178899,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.254133631374496,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.101557059735546,0,0,0,-0.228632216195484,-0.211197402695869,0,0,0,0,0.315360298185513,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0306932217647869,0,0,0,-0.0474795670351238,-0.151662928161655,0,0,-0.0344843450390243,0,0,0
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 |rna_box=117
 |rna_catalog_number=CA402RD-R10a
@@ Line 56: / Line 82: @@
 |rna_tube_id=117F7
 |rna_weight_ug=10
+|rnaseq_library_id=SRhi10012.CTTGTA
 |sample_age=60
+|sample_category=primary cells
 |sample_cell_catalog=N/A
 |sample_cell_line=
@@ Line 69: / Line 97: @@
 |sample_ethnicity=B
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.34148420413951e-205!GO:0005737;cytoplasm;1.51831995828624e-164!GO:0043231;intracellular membrane-bound organelle;1.31406043635286e-160!GO:0043227;membrane-bound organelle;2.50212434063038e-160!GO:0043226;organelle;2.00320308172607e-157!GO:0043229;intracellular organelle;4.11399161385065e-157!GO:0044422;organelle part;1.22865243385633e-119!GO:0044446;intracellular organelle part;2.30098698736618e-118!GO:0044444;cytoplasmic part;2.59874050949156e-115!GO:0032991;macromolecular complex;3.7814603217457e-86!GO:0005515;protein binding;6.95783188362707e-76!GO:0030529;ribonucleoprotein complex;1.67499013241496e-72!GO:0044238;primary metabolic process;3.89165286579062e-72!GO:0044237;cellular metabolic process;8.62155628692032e-72!GO:0043170;macromolecule metabolic process;6.50961213738798e-69!GO:0043233;organelle lumen;3.98340639940921e-65!GO:0031974;membrane-enclosed lumen;3.98340639940921e-65!GO:0044428;nuclear part;1.343493807585e-64!GO:0003723;RNA binding;6.43856460830283e-61!GO:0005634;nucleus;1.12741588110804e-60!GO:0005739;mitochondrion;6.09356358781102e-50!GO:0016043;cellular component organization and biogenesis;2.02060050234905e-46!GO:0006396;RNA processing;2.82593263390282e-44!GO:0043234;protein complex;9.56514932436303e-44!GO:0031090;organelle membrane;2.74353993331902e-43!GO:0015031;protein transport;8.5128644180404e-43!GO:0033036;macromolecule localization;4.82218499844507e-42!GO:0005840;ribosome;2.42416242512755e-41!GO:0019538;protein metabolic process;1.27766319162788e-40!GO:0031981;nuclear lumen;1.4219233497146e-40!GO:0006412;translation;8.15947886151325e-40!GO:0045184;establishment of protein localization;8.15947886151325e-40!GO:0008104;protein localization;7.90808208219894e-39!GO:0016071;mRNA metabolic process;1.36255435992889e-36!GO:0003735;structural constituent of ribosome;7.21104732776526e-36!GO:0044260;cellular macromolecule metabolic process;3.54589029425344e-35!GO:0043283;biopolymer metabolic process;1.79379314121283e-34!GO:0046907;intracellular transport;3.3662860842335e-34!GO:0044267;cellular protein metabolic process;3.55052838460607e-34!GO:0044429;mitochondrial part;8.33912702595636e-34!GO:0008380;RNA splicing;1.34844178603043e-33!GO:0005829;cytosol;6.6369287780628e-33!GO:0009059;macromolecule biosynthetic process;2.27556820759703e-32!GO:0010467;gene expression;2.72283313537321e-32!GO:0031967;organelle envelope;1.23096396862673e-31!GO:0006397;mRNA processing;1.36883267739367e-31!GO:0009058;biosynthetic process;1.36883267739367e-31!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.41652043185524e-31!GO:0031975;envelope;2.37534732793232e-31!GO:0033279;ribosomal subunit;1.34909044328912e-30!GO:0006886;intracellular protein transport;1.90756475315486e-30!GO:0065003;macromolecular complex assembly;6.94552924224647e-30!GO:0044249;cellular biosynthetic process;9.30920463628046e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.81268071681574e-28!GO:0022607;cellular component assembly;7.60208981611266e-26!GO:0006996;organelle organization and biogenesis;3.59840245254479e-25!GO:0043228;non-membrane-bound organelle;6.83164222535042e-25!GO:0043232;intracellular non-membrane-bound organelle;6.83164222535042e-25!GO:0005654;nucleoplasm;1.70589561136462e-24!GO:0005681;spliceosome;1.13183501197501e-23!GO:0005740;mitochondrial envelope;2.01236729545429e-22!GO:0051649;establishment of cellular localization;2.21957253054631e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.3493069902443e-22!GO:0051641;cellular localization;3.07724551217679e-22!GO:0006259;DNA metabolic process;3.45550496024414e-22!GO:0031966;mitochondrial membrane;1.84672908098902e-21!GO:0005783;endoplasmic reticulum;3.49804874152802e-21!GO:0006457;protein folding;1.06235600035133e-20!GO:0019866;organelle inner membrane;2.66601837852675e-20!GO:0044451;nucleoplasm part;1.12732809918442e-19!GO:0016462;pyrophosphatase activity;1.48254979578109e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.6296829404249e-19!GO:0005743;mitochondrial inner membrane;3.24350737594187e-19!GO:0006119;oxidative phosphorylation;3.34471315533275e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;3.67300682304785e-19!GO:0044445;cytosolic part;8.80785827086106e-19!GO:0017111;nucleoside-triphosphatase activity;2.18983801421287e-18!GO:0005730;nucleolus;5.89007804740824e-18!GO:0012505;endomembrane system;1.1357108511079e-17!GO:0007049;cell cycle;1.5786035949845e-17!GO:0003676;nucleic acid binding;2.78204537266811e-17!GO:0048770;pigment granule;3.66072528983436e-17!GO:0042470;melanosome;3.66072528983436e-17!GO:0022618;protein-RNA complex assembly;8.18236068950574e-17!GO:0000166;nucleotide binding;2.50184213008273e-16!GO:0043285;biopolymer catabolic process;3.07966628902589e-16!GO:0015935;small ribosomal subunit;3.45486188930387e-16!GO:0044455;mitochondrial membrane part;3.64028699736158e-16!GO:0044432;endoplasmic reticulum part;7.65523365299741e-16!GO:0044265;cellular macromolecule catabolic process;1.14940523280841e-15!GO:0009057;macromolecule catabolic process;1.32746403045506e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.48339870785292e-15!GO:0015934;large ribosomal subunit;2.96124174376603e-15!GO:0005794;Golgi apparatus;4.82533058366262e-15!GO:0008134;transcription factor binding;7.61218906997647e-15!GO:0016070;RNA metabolic process;1.11148871572855e-14!GO:0008135;translation factor activity, nucleic acid binding;1.13264033505237e-14!GO:0006605;protein targeting;1.16183269321031e-14!GO:0016874;ligase activity;1.29388649640897e-14!GO:0030163;protein catabolic process;3.05923169083636e-14!GO:0051082;unfolded protein binding;4.05266701054836e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.32280154974642e-14!GO:0031980;mitochondrial lumen;1.06385237950105e-13!GO:0005759;mitochondrial matrix;1.06385237950105e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;1.06395812210538e-13!GO:0000278;mitotic cell cycle;1.37392921466763e-13!GO:0005746;mitochondrial respiratory chain;1.63224276191625e-13!GO:0019941;modification-dependent protein catabolic process;2.15223061739673e-13!GO:0043632;modification-dependent macromolecule catabolic process;2.15223061739673e-13!GO:0044257;cellular protein catabolic process;2.27219672301288e-13!GO:0022402;cell cycle process;2.40728749453829e-13!GO:0048193;Golgi vesicle transport;2.7530105435476e-13!GO:0006511;ubiquitin-dependent protein catabolic process;3.66257902661172e-13!GO:0016192;vesicle-mediated transport;4.95992702288148e-13!GO:0051186;cofactor metabolic process;1.17310755448953e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.53851802998023e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.55661598627302e-12!GO:0003954;NADH dehydrogenase activity;1.55661598627302e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.55661598627302e-12!GO:0006512;ubiquitin cycle;1.67185004540474e-12!GO:0006974;response to DNA damage stimulus;2.75655119831225e-12!GO:0044248;cellular catabolic process;2.86721926271779e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;3.46873679947761e-12!GO:0000375;RNA splicing, via transesterification reactions;3.46873679947761e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.46873679947761e-12!GO:0032553;ribonucleotide binding;5.11042504011869e-12!GO:0032555;purine ribonucleotide binding;5.11042504011869e-12!GO:0005761;mitochondrial ribosome;1.12636087338826e-11!GO:0000313;organellar ribosome;1.12636087338826e-11!GO:0017076;purine nucleotide binding;1.40794175489647e-11!GO:0042254;ribosome biogenesis and assembly;1.90712511039192e-11!GO:0003743;translation initiation factor activity;2.35332862433917e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.80252222393035e-11!GO:0006913;nucleocytoplasmic transport;5.12576690970833e-11!GO:0006413;translational initiation;6.41554676066866e-11!GO:0030964;NADH dehydrogenase complex (quinone);6.74366597207029e-11!GO:0045271;respiratory chain complex I;6.74366597207029e-11!GO:0005747;mitochondrial respiratory chain complex I;6.74366597207029e-11!GO:0042775;organelle ATP synthesis coupled electron transport;7.13983237526703e-11!GO:0042773;ATP synthesis coupled electron transport;7.13983237526703e-11!GO:0051169;nuclear transport;9.55394665944808e-11!GO:0005793;ER-Golgi intermediate compartment;1.14666046037791e-10!GO:0008565;protein transporter activity;1.33585251628637e-10!GO:0031965;nuclear membrane;1.5647758956534e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.84079504948032e-10!GO:0016887;ATPase activity;1.90747374538858e-10!GO:0042623;ATPase activity, coupled;2.42779263568601e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.47690897540461e-10!GO:0048523;negative regulation of cellular process;2.71384541656298e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.94868322092164e-10!GO:0006281;DNA repair;3.64390441081094e-10!GO:0004386;helicase activity;3.77606620577278e-10!GO:0000087;M phase of mitotic cell cycle;4.31299985312347e-10!GO:0006732;coenzyme metabolic process;5.87471749144878e-10!GO:0005789;endoplasmic reticulum membrane;5.87471749144878e-10!GO:0007067;mitosis;6.90997151180444e-10!GO:0005635;nuclear envelope;7.35248760810413e-10!GO:0006446;regulation of translational initiation;9.19471953424613e-10!GO:0016604;nuclear body;1.5584124798262e-09!GO:0006888;ER to Golgi vesicle-mediated transport;2.16134996631548e-09!GO:0009719;response to endogenous stimulus;2.19109609962483e-09!GO:0009055;electron carrier activity;2.2279735995989e-09!GO:0044453;nuclear membrane part;2.46155168134716e-09!GO:0005524;ATP binding;2.51490747145525e-09!GO:0009259;ribonucleotide metabolic process;3.11392857437732e-09!GO:0005694;chromosome;3.6496944937898e-09!GO:0008026;ATP-dependent helicase activity;3.6496944937898e-09!GO:0006163;purine nucleotide metabolic process;3.70291873814763e-09!GO:0051276;chromosome organization and biogenesis;4.17030300287091e-09!GO:0005788;endoplasmic reticulum lumen;5.05194012726202e-09!GO:0017038;protein import;5.07282190033831e-09!GO:0032559;adenyl ribonucleotide binding;5.44763830887146e-09!GO:0012501;programmed cell death;8.34818150432818e-09!GO:0051726;regulation of cell cycle;8.75010817668648e-09!GO:0009056;catabolic process;8.89457267515926e-09!GO:0000074;regulation of progression through cell cycle;9.9363512966404e-09!GO:0006461;protein complex assembly;9.95099723729506e-09!GO:0065002;intracellular protein transport across a membrane;1.20651312294885e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;1.22992788783754e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.28481875186273e-08!GO:0003712;transcription cofactor activity;1.41153639922918e-08!GO:0006915;apoptosis;1.43915798185166e-08!GO:0048519;negative regulation of biological process;1.43915798185166e-08!GO:0006260;DNA replication;1.45464324666779e-08!GO:0009150;purine ribonucleotide metabolic process;1.58530206898623e-08!GO:0030554;adenyl nucleotide binding;1.71887928394514e-08!GO:0006164;purine nucleotide biosynthetic process;1.72178286666603e-08!GO:0022403;cell cycle phase;1.74026707890296e-08!GO:0051301;cell division;2.02393320033893e-08!GO:0006366;transcription from RNA polymerase II promoter;2.26728216899072e-08!GO:0005643;nuclear pore;2.39814742671424e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.89382862057075e-08!GO:0006323;DNA packaging;3.40125318521199e-08!GO:0065004;protein-DNA complex assembly;3.6121296225254e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.83584711692684e-08!GO:0009260;ribonucleotide biosynthetic process;4.28696417574997e-08!GO:0008639;small protein conjugating enzyme activity;4.47229941259361e-08!GO:0008219;cell death;6.39620081006558e-08!GO:0016265;death;6.39620081006558e-08!GO:0009152;purine ribonucleotide biosynthetic process;7.43558779698887e-08!GO:0050657;nucleic acid transport;7.43701268859552e-08!GO:0051236;establishment of RNA localization;7.43701268859552e-08!GO:0050658;RNA transport;7.43701268859552e-08!GO:0016607;nuclear speck;7.87182465118259e-08!GO:0009199;ribonucleoside triphosphate metabolic process;8.01224619374377e-08!GO:0006403;RNA localization;9.6078284561699e-08!GO:0004842;ubiquitin-protein ligase activity;1.0108814221796e-07!GO:0030120;vesicle coat;1.14505891227143e-07!GO:0030662;coated vesicle membrane;1.14505891227143e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.16170232069372e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.16170232069372e-07!GO:0015986;ATP synthesis coupled proton transport;1.16924161103864e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.16924161103864e-07!GO:0048475;coated membrane;1.21648104181362e-07!GO:0030117;membrane coat;1.21648104181362e-07!GO:0009141;nucleoside triphosphate metabolic process;1.2261763306513e-07!GO:0019787;small conjugating protein ligase activity;1.47883283973238e-07!GO:0006399;tRNA metabolic process;1.69598360012071e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.69821592610052e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.69821592610052e-07!GO:0043412;biopolymer modification;1.92406160287392e-07!GO:0044427;chromosomal part;2.06770516156127e-07!GO:0006333;chromatin assembly or disassembly;2.07505584049932e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.50423358309041e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.50423358309041e-07!GO:0006364;rRNA processing;2.84274714957548e-07!GO:0031324;negative regulation of cellular metabolic process;2.85748377935157e-07!GO:0003697;single-stranded DNA binding;3.90556881345196e-07!GO:0009060;aerobic respiration;4.01977867000876e-07!GO:0046930;pore complex;4.09004231134003e-07!GO:0005768;endosome;4.45003425824452e-07!GO:0016072;rRNA metabolic process;5.63923015757573e-07!GO:0043566;structure-specific DNA binding;5.67729298392505e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.90646485046488e-07!GO:0045333;cellular respiration;6.60789356378369e-07!GO:0046034;ATP metabolic process;7.0905276215477e-07!GO:0016881;acid-amino acid ligase activity;7.20499671396768e-07!GO:0019829;cation-transporting ATPase activity;8.51997125980264e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.04103634410469e-06!GO:0043038;amino acid activation;1.15905709741909e-06!GO:0006418;tRNA aminoacylation for protein translation;1.15905709741909e-06!GO:0043039;tRNA aminoacylation;1.15905709741909e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.18834486153074e-06!GO:0000279;M phase;1.1954053678567e-06!GO:0051170;nuclear import;1.20783907653579e-06!GO:0006754;ATP biosynthetic process;1.28101853802014e-06!GO:0006753;nucleoside phosphate metabolic process;1.28101853802014e-06!GO:0003924;GTPase activity;1.3665330051458e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.44985857919637e-06!GO:0051246;regulation of protein metabolic process;1.48114248434157e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.5036829495685e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.5036829495685e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.5036829495685e-06!GO:0043069;negative regulation of programmed cell death;1.83901736215554e-06!GO:0005773;vacuole;1.86947908512667e-06!GO:0006606;protein import into nucleus;2.07922726414491e-06!GO:0016491;oxidoreductase activity;2.07922726414491e-06!GO:0006464;protein modification process;2.12394304492259e-06!GO:0044431;Golgi apparatus part;2.17483721833721e-06!GO:0051188;cofactor biosynthetic process;2.47857800065628e-06!GO:0050794;regulation of cellular process;2.60840614272931e-06!GO:0015630;microtubule cytoskeleton;2.62859079219648e-06!GO:0051187;cofactor catabolic process;3.00713593476303e-06!GO:0016853;isomerase activity;3.40955612052478e-06!GO:0005667;transcription factor complex;3.47021480089189e-06!GO:0043066;negative regulation of apoptosis;3.63746337310378e-06!GO:0051028;mRNA transport;3.78920152368964e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.09630246392017e-06!GO:0043067;regulation of programmed cell death;4.27967051633316e-06!GO:0042981;regulation of apoptosis;4.32778467060798e-06!GO:0009892;negative regulation of metabolic process;4.45093802671224e-06!GO:0006613;cotranslational protein targeting to membrane;4.54987044913078e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.84592447583063e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.46493076784766e-06!GO:0006916;anti-apoptosis;6.08133249772488e-06!GO:0000245;spliceosome assembly;6.56675666433453e-06!GO:0006099;tricarboxylic acid cycle;7.04203121042158e-06!GO:0046356;acetyl-CoA catabolic process;7.04203121042158e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.13913727034229e-06!GO:0005798;Golgi-associated vesicle;8.76052817262229e-06!GO:0009109;coenzyme catabolic process;1.00720783532095e-05!GO:0016859;cis-trans isomerase activity;1.00720783532095e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.00988363601844e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.01069802306163e-05!GO:0005770;late endosome;1.0128177558234e-05!GO:0000785;chromatin;1.0802469204023e-05!GO:0005525;GTP binding;1.11771980955953e-05!GO:0006752;group transfer coenzyme metabolic process;1.14861478347437e-05!GO:0008361;regulation of cell size;1.18472139301827e-05!GO:0006334;nucleosome assembly;1.42900398663335e-05!GO:0031252;leading edge;1.44874825867243e-05!GO:0016787;hydrolase activity;1.4851598287884e-05!GO:0016049;cell growth;1.55033307268033e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.6508907020329e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.68417027581385e-05!GO:0004298;threonine endopeptidase activity;1.92535507688806e-05!GO:0003724;RNA helicase activity;2.13097599618068e-05!GO:0000323;lytic vacuole;2.2804867846201e-05!GO:0005764;lysosome;2.2804867846201e-05!GO:0007005;mitochondrion organization and biogenesis;2.35754285871962e-05!GO:0008654;phospholipid biosynthetic process;2.50433497516934e-05!GO:0005581;collagen;2.55739053652072e-05!GO:0051789;response to protein stimulus;2.74613266776541e-05!GO:0006986;response to unfolded protein;2.74613266776541e-05!GO:0016779;nucleotidyltransferase activity;2.78515044779677e-05!GO:0045259;proton-transporting ATP synthase complex;2.86802625409391e-05!GO:0043623;cellular protein complex assembly;2.97572514666555e-05!GO:0006084;acetyl-CoA metabolic process;3.23376634667749e-05!GO:0044440;endosomal part;3.38982556211174e-05!GO:0010008;endosome membrane;3.38982556211174e-05!GO:0009108;coenzyme biosynthetic process;3.4353471509294e-05!GO:0001558;regulation of cell growth;3.49554681608265e-05!GO:0043687;post-translational protein modification;3.91144189957468e-05!GO:0005583;fibrillar collagen;3.94549583720032e-05!GO:0005813;centrosome;4.09685406925326e-05!GO:0009117;nucleotide metabolic process;4.42869899336124e-05!GO:0045786;negative regulation of progression through cell cycle;4.45658935843302e-05!GO:0016023;cytoplasmic membrane-bound vesicle;4.71333568144208e-05!GO:0016568;chromatin modification;4.81037952867406e-05!GO:0031497;chromatin assembly;4.95718080503115e-05!GO:0031988;membrane-bound vesicle;4.99469750879632e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.99469750879632e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.69290672072359e-05!GO:0005819;spindle;6.20780063672578e-05!GO:0032446;protein modification by small protein conjugation;6.30724941909568e-05!GO:0000139;Golgi membrane;6.74132233343631e-05!GO:0016564;transcription repressor activity;6.80890910750953e-05!GO:0030867;rough endoplasmic reticulum membrane;6.97252627563084e-05!GO:0016567;protein ubiquitination;8.74698593745909e-05!GO:0005815;microtubule organizing center;8.92812768713367e-05!GO:0003714;transcription corepressor activity;9.46481178180545e-05!GO:0051427;hormone receptor binding;9.85625175463893e-05!GO:0051168;nuclear export;0.00012378337839441!GO:0005048;signal sequence binding;0.000123906648118475!GO:0044262;cellular carbohydrate metabolic process;0.000130174725796409!GO:0032561;guanyl ribonucleotide binding;0.000134640585680764!GO:0019001;guanyl nucleotide binding;0.000134640585680764!GO:0005769;early endosome;0.000141307958354191!GO:0019843;rRNA binding;0.000157075843094012!GO:0051329;interphase of mitotic cell cycle;0.000157876042619093!GO:0005762;mitochondrial large ribosomal subunit;0.000157876042619093!GO:0000315;organellar large ribosomal subunit;0.000157876042619093!GO:0000151;ubiquitin ligase complex;0.000176081296811275!GO:0016563;transcription activator activity;0.000181741177327806!GO:0016481;negative regulation of transcription;0.000182379508555121!GO:0043021;ribonucleoprotein binding;0.000206826309246978!GO:0035257;nuclear hormone receptor binding;0.000209091119742174!GO:0003899;DNA-directed RNA polymerase activity;0.000209091119742174!GO:0050789;regulation of biological process;0.00021608542641096!GO:0003713;transcription coactivator activity;0.000217372369281564!GO:0045454;cell redox homeostasis;0.000218193547154473!GO:0006091;generation of precursor metabolites and energy;0.000218960101946087!GO:0030663;COPI coated vesicle membrane;0.000228297618222135!GO:0030126;COPI vesicle coat;0.000228297618222135!GO:0033116;ER-Golgi intermediate compartment membrane;0.000238580255576656!GO:0000075;cell cycle checkpoint;0.000256448666826934!GO:0006612;protein targeting to membrane;0.000297945957181488!GO:0031982;vesicle;0.000342784113771329!GO:0005885;Arp2/3 protein complex;0.000369569368994255!GO:0031410;cytoplasmic vesicle;0.000390479858647807!GO:0015980;energy derivation by oxidation of organic compounds;0.000403863522422517!GO:0030133;transport vesicle;0.000467819515619878!GO:0051325;interphase;0.000473548792530286!GO:0046474;glycerophospholipid biosynthetic process;0.000505642272818127!GO:0019867;outer membrane;0.000529974040952074!GO:0008250;oligosaccharyl transferase complex;0.000530944780144221!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000543385552968747!GO:0006891;intra-Golgi vesicle-mediated transport;0.000634816458651767!GO:0008186;RNA-dependent ATPase activity;0.000648870953422751!GO:0030036;actin cytoskeleton organization and biogenesis;0.000662989675848473!GO:0016044;membrane organization and biogenesis;0.000691518096490133!GO:0044420;extracellular matrix part;0.000699722761926274!GO:0030880;RNA polymerase complex;0.000727534456217786!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00073501648318261!GO:0007051;spindle organization and biogenesis;0.000799220565468481!GO:0006950;response to stress;0.000816472414667113!GO:0005905;coated pit;0.000821298750550421!GO:0004576;oligosaccharyl transferase activity;0.000831383008900201!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000845142425425906!GO:0043681;protein import into mitochondrion;0.000845146871066737!GO:0030137;COPI-coated vesicle;0.000858810474248689!GO:0031968;organelle outer membrane;0.000868215761321513!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000940281056828475!GO:0005791;rough endoplasmic reticulum;0.00105659885412856!GO:0006261;DNA-dependent DNA replication;0.00105827051792436!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00117330933922479!GO:0051920;peroxiredoxin activity;0.00124803880462866!GO:0003690;double-stranded DNA binding;0.00132071754983408!GO:0006793;phosphorus metabolic process;0.00135372971488384!GO:0006796;phosphate metabolic process;0.00135372971488384!GO:0048500;signal recognition particle;0.00137593278671802!GO:0048522;positive regulation of cellular process;0.00140502649467191!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00143611709723207!GO:0005741;mitochondrial outer membrane;0.00151150875197936!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00160287263548944!GO:0040008;regulation of growth;0.00165469505281717!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00170267582537249!GO:0000428;DNA-directed RNA polymerase complex;0.00170267582537249!GO:0004004;ATP-dependent RNA helicase activity;0.00179035556577528!GO:0030027;lamellipodium;0.00183467415951964!GO:0016740;transferase activity;0.00189130234555905!GO:0007243;protein kinase cascade;0.00204320121334654!GO:0031072;heat shock protein binding;0.00204663363879138!GO:0030134;ER to Golgi transport vesicle;0.00213216263392056!GO:0000314;organellar small ribosomal subunit;0.00213216263392056!GO:0005763;mitochondrial small ribosomal subunit;0.00213216263392056!GO:0000059;protein import into nucleus, docking;0.00220768809844134!GO:0006818;hydrogen transport;0.00231536114914264!GO:0007010;cytoskeleton organization and biogenesis;0.00237693270214375!GO:0044452;nucleolar part;0.00247170802620982!GO:0030521;androgen receptor signaling pathway;0.00248276563706546!GO:0006402;mRNA catabolic process;0.00248736948675695!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00257625018328966!GO:0018196;peptidyl-asparagine modification;0.00258092065835589!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00258092065835589!GO:0007033;vacuole organization and biogenesis;0.00264155319175341!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00266816653835651!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00268331263624499!GO:0030658;transport vesicle membrane;0.0027982978891519!GO:0035258;steroid hormone receptor binding;0.00280288319597897!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00283175454388103!GO:0015992;proton transport;0.00287962246548828!GO:0003682;chromatin binding;0.00289976669809211!GO:0030127;COPII vesicle coat;0.0029472993748096!GO:0012507;ER to Golgi transport vesicle membrane;0.0029472993748096!GO:0000082;G1/S transition of mitotic cell cycle;0.00295529350558197!GO:0007006;mitochondrial membrane organization and biogenesis;0.00302652415926394!GO:0006626;protein targeting to mitochondrion;0.00314783027895879!GO:0019222;regulation of metabolic process;0.00320348943116441!GO:0046489;phosphoinositide biosynthetic process;0.00326874494968457!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00335653196904187!GO:0045047;protein targeting to ER;0.00335653196904187!GO:0030029;actin filament-based process;0.0033891613297121!GO:0016310;phosphorylation;0.00346812939588149!GO:0008094;DNA-dependent ATPase activity;0.0037591247212808!GO:0031418;L-ascorbic acid binding;0.00378031386323165!GO:0003729;mRNA binding;0.00379205309670693!GO:0006414;translational elongation;0.00398542747002952!GO:0051252;regulation of RNA metabolic process;0.00398614422310369!GO:0016363;nuclear matrix;0.00414363550812036!GO:0046483;heterocycle metabolic process;0.00431036750548718!GO:0045892;negative regulation of transcription, DNA-dependent;0.00453742749559359!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00455470745133315!GO:0007264;small GTPase mediated signal transduction;0.00455470745133315!GO:0016251;general RNA polymerase II transcription factor activity;0.00457711695878163!GO:0003684;damaged DNA binding;0.0048694997553685!GO:0008312;7S RNA binding;0.00488249881505279!GO:0048487;beta-tubulin binding;0.00491671459095009!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00494093817022297!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00494093817022297!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00494093817022297!GO:0019798;procollagen-proline dioxygenase activity;0.00500285027918827!GO:0045045;secretory pathway;0.0050684341358562!GO:0006979;response to oxidative stress;0.00509261851370794!GO:0048471;perinuclear region of cytoplasm;0.00523138552871678!GO:0043284;biopolymer biosynthetic process;0.00523138552871678!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00526134324262342!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00564449098639431!GO:0019899;enzyme binding;0.00580315159729416!GO:0030118;clathrin coat;0.00595307487288276!GO:0009165;nucleotide biosynthetic process;0.00604299590949221!GO:0045893;positive regulation of transcription, DNA-dependent;0.00607618503161075!GO:0007040;lysosome organization and biogenesis;0.00608004242073833!GO:0005869;dynactin complex;0.00638214914646756!GO:0000339;RNA cap binding;0.00647352390451449!GO:0006352;transcription initiation;0.00649259793036311!GO:0016408;C-acyltransferase activity;0.00658843029084287!GO:0046467;membrane lipid biosynthetic process;0.00671306654744989!GO:0006839;mitochondrial transport;0.00671306654744989!GO:0031543;peptidyl-proline dioxygenase activity;0.00727729648695!GO:0030660;Golgi-associated vesicle membrane;0.00727729648695!GO:0019752;carboxylic acid metabolic process;0.0072951278426122!GO:0007050;cell cycle arrest;0.007356893887717!GO:0000775;chromosome, pericentric region;0.00738997571217077!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00767062451540487!GO:0015399;primary active transmembrane transporter activity;0.00767062451540487!GO:0065009;regulation of a molecular function;0.00779660643327271!GO:0006405;RNA export from nucleus;0.00791567435323836!GO:0000786;nucleosome;0.00799516543172224!GO:0006383;transcription from RNA polymerase III promoter;0.00801346043948692!GO:0007052;mitotic spindle organization and biogenesis;0.00813267688598673!GO:0007034;vacuolar transport;0.00813781317002786!GO:0051101;regulation of DNA binding;0.00833701593178173!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00856680073077871!GO:0016126;sterol biosynthetic process;0.00865525954705972!GO:0001726;ruffle;0.00911742825975505!GO:0008092;cytoskeletal protein binding;0.00920070453108152!GO:0006082;organic acid metabolic process;0.00925543463827743!GO:0008139;nuclear localization sequence binding;0.00929725818847664!GO:0043488;regulation of mRNA stability;0.00935359845146734!GO:0043487;regulation of RNA stability;0.00935359845146734!GO:0005586;collagen type III;0.00944669679678811!GO:0048146;positive regulation of fibroblast proliferation;0.00956897519052587!GO:0003711;transcription elongation regulator activity;0.00990230698034077!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00990628261878111!GO:0050681;androgen receptor binding;0.00997548080791829!GO:0048144;fibroblast proliferation;0.00997548080791829!GO:0048145;regulation of fibroblast proliferation;0.00997548080791829!GO:0003746;translation elongation factor activity;0.0102116472659305!GO:0032508;DNA duplex unwinding;0.0106630702266546!GO:0032392;DNA geometric change;0.0106630702266546!GO:0008180;signalosome;0.0109119751966312!GO:0005862;muscle thin filament tropomyosin;0.0110075144828544!GO:0022890;inorganic cation transmembrane transporter activity;0.011203266292445!GO:0045936;negative regulation of phosphate metabolic process;0.0113565075343434!GO:0006611;protein export from nucleus;0.0113883783761144!GO:0005657;replication fork;0.0114208359964096!GO:0006650;glycerophospholipid metabolic process;0.0116544802139393!GO:0007041;lysosomal transport;0.0117233049284464!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0121129462017324!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0121129462017324!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0121129462017324!GO:0017166;vinculin binding;0.0122686963431248!GO:0030199;collagen fibril organization;0.0122801047879204!GO:0007093;mitotic cell cycle checkpoint;0.0128077917924204!GO:0051052;regulation of DNA metabolic process;0.0132423979278161!GO:0009225;nucleotide-sugar metabolic process;0.0135822920581767!GO:0003678;DNA helicase activity;0.013763067161076!GO:0006302;double-strand break repair;0.0140228847454318!GO:0045941;positive regulation of transcription;0.0140311122516865!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0144786217741806!GO:0009967;positive regulation of signal transduction;0.0147268538889223!GO:0009112;nucleobase metabolic process;0.0149085088439938!GO:0030659;cytoplasmic vesicle membrane;0.0150716927908888!GO:0006401;RNA catabolic process;0.0151997563704!GO:0006607;NLS-bearing substrate import into nucleus;0.0152126110374595!GO:0000776;kinetochore;0.0154609749713455!GO:0050811;GABA receptor binding;0.0154796096714266!GO:0008154;actin polymerization and/or depolymerization;0.0155602941084184!GO:0051087;chaperone binding;0.01582589630497!GO:0007088;regulation of mitosis;0.0160729722101654!GO:0030518;steroid hormone receptor signaling pathway;0.01620084084828!GO:0005832;chaperonin-containing T-complex;0.0165123590591819!GO:0031124;mRNA 3'-end processing;0.0169277930630203!GO:0000049;tRNA binding;0.0179657795851892!GO:0008283;cell proliferation;0.0180287412314448!GO:0030176;integral to endoplasmic reticulum membrane;0.0187640949844874!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0194962985194393!GO:0003756;protein disulfide isomerase activity;0.0195351441908594!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0195351441908594!GO:0008033;tRNA processing;0.0195351441908594!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0196060744751825!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0196060744751825!GO:0006275;regulation of DNA replication;0.0196132089497676!GO:0043022;ribosome binding;0.0197488150296143!GO:0004527;exonuclease activity;0.019819595716742!GO:0015631;tubulin binding;0.0198381843634253!GO:0006506;GPI anchor biosynthetic process;0.0204491071846419!GO:0045792;negative regulation of cell size;0.0205140631921856!GO:0006268;DNA unwinding during replication;0.0208522384480376!GO:0005801;cis-Golgi network;0.0212694605879617!GO:0043433;negative regulation of transcription factor activity;0.0218001145121734!GO:0030132;clathrin coat of coated pit;0.0228763643742797!GO:0051128;regulation of cellular component organization and biogenesis;0.0233519371947825!GO:0006595;polyamine metabolic process;0.0233519371947825!GO:0030119;AP-type membrane coat adaptor complex;0.0233888421995341!GO:0065007;biological regulation;0.0235315509878372!GO:0042326;negative regulation of phosphorylation;0.0236070520934358!GO:0006505;GPI anchor metabolic process;0.0238057464846481!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0240357219731714!GO:0009116;nucleoside metabolic process;0.0240901657084118!GO:0005975;carbohydrate metabolic process;0.0244487073921364!GO:0006497;protein amino acid lipidation;0.0244770141744674!GO:0007030;Golgi organization and biogenesis;0.0245360585012326!GO:0008047;enzyme activator activity;0.0253447461998098!GO:0005684;U2-dependent spliceosome;0.025345124801077!GO:0051098;regulation of binding;0.0257181733569858!GO:0032940;secretion by cell;0.0257864442575413!GO:0008147;structural constituent of bone;0.0259588499081449!GO:0030308;negative regulation of cell growth;0.0260666153645882!GO:0006007;glucose catabolic process;0.0272549514366162!GO:0032507;maintenance of cellular protein localization;0.0275525934571986!GO:0006897;endocytosis;0.0279556026002024!GO:0010324;membrane invagination;0.0279556026002024!GO:0022415;viral reproductive process;0.0282848014738169!GO:0035035;histone acetyltransferase binding;0.0287672882179989!GO:0005874;microtubule;0.0290960215609208!GO:0031901;early endosome membrane;0.0300443023968577!GO:0006310;DNA recombination;0.0305777728666945!GO:0005669;transcription factor TFIID complex;0.0314134450528448!GO:0044433;cytoplasmic vesicle part;0.0322398733861827!GO:0005774;vacuolar membrane;0.0326352839858486!GO:0051235;maintenance of localization;0.0326352839858486!GO:0033673;negative regulation of kinase activity;0.0327293086719119!GO:0006469;negative regulation of protein kinase activity;0.0327293086719119!GO:0030384;phosphoinositide metabolic process;0.0340322137430693!GO:0000209;protein polyubiquitination;0.034265243529047!GO:0006354;RNA elongation;0.0344187663417131!GO:0042802;identical protein binding;0.0345929302553753!GO:0051348;negative regulation of transferase activity;0.0345965366475402!GO:0030131;clathrin adaptor complex;0.0351524969278649!GO:0008538;proteasome activator activity;0.0351614595609243!GO:0048518;positive regulation of biological process;0.0352686663863464!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0360945562826934!GO:0015002;heme-copper terminal oxidase activity;0.0360945562826934!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0360945562826934!GO:0004129;cytochrome-c oxidase activity;0.0360945562826934!GO:0031123;RNA 3'-end processing;0.0361067116284862!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0361445744751083!GO:0033043;regulation of organelle organization and biogenesis;0.0361445744751083!GO:0005784;translocon complex;0.036566986499472!GO:0016860;intramolecular oxidoreductase activity;0.0375015031839187!GO:0008610;lipid biosynthetic process;0.0379450766913874!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0382548520516925!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0382548520516925!GO:0043492;ATPase activity, coupled to movement of substances;0.0386810195609386!GO:0051059;NF-kappaB binding;0.0389056933446688!GO:0030934;anchoring collagen;0.0389623596171186!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.039121220161746!GO:0006376;mRNA splice site selection;0.039121220161746!GO:0000389;nuclear mRNA 3'-splice site recognition;0.039121220161746!GO:0006509;membrane protein ectodomain proteolysis;0.0391643992667745!GO:0033619;membrane protein proteolysis;0.0391643992667745!GO:0031902;late endosome membrane;0.0393250938530076!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0400969732365322!GO:0051540;metal cluster binding;0.0402839439709252!GO:0051536;iron-sulfur cluster binding;0.0402839439709252!GO:0006984;ER-nuclear signaling pathway;0.040387234342653!GO:0000118;histone deacetylase complex;0.0404172982470178!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0404172982470178!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0408102639622202!GO:0032984;macromolecular complex disassembly;0.041048890329917!GO:0030433;ER-associated protein catabolic process;0.0412974725825973!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0412974725825973!GO:0046870;cadmium ion binding;0.0419171703272839!GO:0006289;nucleotide-excision repair;0.0420934542409838!GO:0006144;purine base metabolic process;0.042128667507468!GO:0004248;stromelysin 1 activity;0.0421579164889167!GO:0005584;collagen type I;0.042612425260046!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0430678770117874!GO:0006778;porphyrin metabolic process;0.0430678770117874!GO:0033013;tetrapyrrole metabolic process;0.0430678770117874!GO:0045185;maintenance of protein localization;0.0435391248779231!GO:0000086;G2/M transition of mitotic cell cycle;0.0437405876255393!GO:0016197;endosome transport;0.0440491077587225!GO:0004003;ATP-dependent DNA helicase activity;0.0440570218332414!GO:0043130;ubiquitin binding;0.0443734848691748!GO:0032182;small conjugating protein binding;0.0443734848691748!GO:0030149;sphingolipid catabolic process;0.0443734848691748!GO:0008320;protein transmembrane transporter activity;0.0443734848691748!GO:0043189;H4/H2A histone acetyltransferase complex;0.0453912966924952!GO:0035267;NuA4 histone acetyltransferase complex;0.0457420137891896!GO:0047485;protein N-terminus binding;0.0458109102063974!GO:0042168;heme metabolic process;0.0461838285527735!GO:0006284;base-excision repair;0.0469125240892052!GO:0008168;methyltransferase activity;0.0471703739093597!GO:0030032;lamellipodium biogenesis;0.0474512771691607!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0476763557911957!GO:0051651;maintenance of cellular localization;0.0476763557911957!GO:0006643;membrane lipid metabolic process;0.0476763557911957!GO:0006695;cholesterol biosynthetic process;0.0477471544878783!GO:0005315;inorganic phosphate transmembrane transporter activity;0.0482783065444163!GO:0006790;sulfur metabolic process;0.0483046525843317!GO:0008022;protein C-terminus binding;0.0485379391120708!GO:0006417;regulation of translation;0.0491433414884984
 |sample_id=11339
 |sample_note=
@@ Line 76: / Line 105: @@
 |sample_tissue=cartilage
 |top_motifs=SMAD1..7,9:2.33979718205;HES1:1.94936984563;ALX4:1.89657869012;ZNF238:1.73631014712;EBF1:1.71936544178;TAL1_TCF{3,4,12}:1.5895641657;NR1H4:1.40745399791;HMX1:1.34509633522;ATF6:1.30905026775;TFCP2:1.2896905626;NANOG{mouse}:1.27043069826;HOX{A4,D4}:1.25846888331;NFATC1..3:1.23706080882;MAFB:1.17414561977;AR:1.15000699314;PAX4:1.03252903134;PRDM1:1.03071045878;EN1,2:1.03042457618;HMGA1,2:1.00456047603;NR6A1:0.991954237372;TLX1..3_NFIC{dimer}:0.951018213327;TLX2:0.94365136452;TBP:0.904956761478;TFAP4:0.898202036912;RXRA_VDR{dimer}:0.897821356814;TBX4,5:0.872433030782;ONECUT1,2:0.809479755945;EVI1:0.798371863021;GLI1..3:0.751351138987;HIF1A:0.750085628574;STAT1,3:0.687985272115;POU3F1..4:0.681899924671;DBP:0.665102677158;NFE2L2:0.652025545587;NFIX:0.643464268996;XBP1:0.640803846411;MTF1:0.640451006966;HAND1,2:0.617818933065;MYFfamily:0.616077392504;ZNF423:0.591437973373;PRRX1,2:0.568810624884;YY1:0.562135466082;STAT2,4,6:0.558105838129;GTF2A1,2:0.513400399671;GFI1:0.506738869048;GTF2I:0.503864235676;NR3C1:0.487441837084;LEF1_TCF7_TCF7L1,2:0.48533276271;MYBL2:0.441885415928;ESR1:0.429509715428;HOX{A5,B5}:0.426798382043;PBX1:0.411367788385;UFEwm:0.394553459702;FOXA2:0.383591902898;MAZ:0.382294414611;HBP1_HMGB_SSRP1_UBTF:0.373929784889;AHR_ARNT_ARNT2:0.371652687461;GFI1B:0.360670255385;HLF:0.337360587642;TEAD1:0.326079815598;PAX8:0.323758132706;RXR{A,B,G}:0.314948965835;FOXN1:0.294355325392;EP300:0.291944473617;JUN:0.290058805842;KLF4:0.284105582846;MTE{core}:0.267887585327;RFX1:0.253889241096;MEF2{A,B,C,D}:0.251458178224;NKX2-1,4:0.249149655334;HSF1,2:0.247814041149;MYB:0.24203389496;FOS_FOS{B,L1}_JUN{B,D}:0.232110732271;PPARG:0.225418787932;FOSL2:0.207025369647;CDC5L:0.195491341847;HNF1A:0.188829192339;BACH2:0.161149555519;ZNF148:0.15066936022;GCM1,2:0.148280130346;RUNX1..3:0.137888819956;ALX1:0.129985673751;MZF1:0.129909113257;CEBPA,B_DDIT3:0.108189816261;MED-1{core}:0.102111673173;SOX17:0.0998612799729;ELK1,4_GABP{A,B1}:0.0843330674363;NFIL3:0.0777369055335;TP53:0.0702832504817;TFAP2{A,C}:0.0680778933681;RREB1:0.0672144261002;POU5F1:0.0612509487967;IKZF1:0.0390044076305;E2F1..5:0.0383227417446;NHLH1,2:0.0325806922894;ZNF384:0.0298055348882;REST:0.00912533413863;PAX6:-0.00207317037274;POU1F1:-0.00472016034377;LHX3,4:-0.0403040589524;HIC1:-0.0571703848168;PAX1,9:-0.0572522644248;SPZ1:-0.0748271010773;NFE2:-0.0814177651096;PAX3,7:-0.0921804949902;RORA:-0.0960877439325;POU6F1:-0.105749628674;SREBF1,2:-0.126046140902;VSX1,2:-0.148897262787;SOX2:-0.156981626339;ELF1,2,4:-0.158968159448;TFDP1:-0.168183513068;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.177374152782;NKX2-3_NKX2-5:-0.177660631364;NFKB1_REL_RELA:-0.178189760098;PAX5:-0.191752651936;ZNF143:-0.196070938094;DMAP1_NCOR{1,2}_SMARC:-0.198602508303;NFY{A,B,C}:-0.215516461266;SRF:-0.232518462379;PAX2:-0.241519468569;FOX{F1,F2,J1}:-0.248800200461;TFAP2B:-0.289963893606;ZIC1..3:-0.304129677322;ESRRA:-0.317733156144;IRF7:-0.344354933976;NKX2-2,8:-0.351740228418;NANOG:-0.36147006342;XCPE1{core}:-0.363518239761;NRF1:-0.371800928209;CUX2:-0.372993780961;GATA6:-0.383068766822;NR5A1,2:-0.395662764129;IRF1,2:-0.40396078963;ZFP161:-0.410522326996;PATZ1:-0.413794207508;NKX3-2:-0.414302500382;GATA4:-0.418393183745;ATF5_CREB3:-0.422029690005;RBPJ:-0.423357641234;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.427837100867;ETS1,2:-0.430138748805;ZBTB6:-0.430958742792;CRX:-0.437217094085;ADNP_IRX_SIX_ZHX:-0.456749923652;HOX{A6,A7,B6,B7}:-0.457662810839;BPTF:-0.465131915579;SOX{8,9,10}:-0.476000414568;TEF:-0.482153609006;STAT5{A,B}:-0.488353305365;LMO2:-0.489661173956;NFE2L1:-0.512760424625;PDX1:-0.526483338664;SPI1:-0.526744792574;FOX{D1,D2}:-0.544463574846;RFX2..5_RFXANK_RFXAP:-0.546443650932;NKX6-1,2:-0.546555689926;GZF1:-0.548788186701;TOPORS:-0.586207066889;SPIB:-0.600798910086;OCT4_SOX2{dimer}:-0.606667065236;ATF2:-0.624646001143;HNF4A_NR2F1,2:-0.642263615311;bHLH_family:-0.650515918268;T:-0.658589850925;ATF4:-0.669414322372;EGR1..3:-0.678435043956;FOXD3:-0.710006363012;TGIF1:-0.721341108035;AIRE:-0.745546158287;CREB1:-0.789306286158;FOXP3:-0.814924569275;ZEB1:-0.830999134261;SNAI1..3:-0.833397203435;FOXO1,3,4:-0.837095570003;BREu{core}:-0.858425635895;NKX3-1:-0.9361072186;SOX5:-1.03821148511;SP1:-1.07455215661;ARID5B:-1.08500381542;HOXA9_MEIS1:-1.11471247933;FOXL1:-1.16329007277;CDX1,2,4:-1.16465261769;FOX{I1,J2}:-1.19462323226;MYOD1:-1.19551236855;IKZF2:-1.22028216546;PITX1..3:-1.25717112619;POU2F1..3:-1.25996416462;FOXP1:-1.31624231409;FOXM1:-1.34949913004;ZBTB16:-1.53307924087;FOXQ1:-1.63376333752
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11339-117F7;search_select_hide=table117:FF:11339-117F7
 }}

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FF:11339-117F7: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 17:53, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0