FF:11385-118B8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005406 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008074;DRR008946;DRZ000371;DRZ001756;DRZ011721;DRZ013106 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000255,CL:0000451,CL:0000784 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000045 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor3.CNhs12200.11385-118B8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor3.CNhs12200.11385-118B8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor3.CNhs12200.11385-118B8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor3.CNhs12200.11385-118B8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Dendritic%2520Cells%2520-%2520plasmacytoid%252c%2520donor3.CNhs12200.11385-118B8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11385-118B8 | |id=FF:11385-118B8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000045 | ||
|is_obsolete= | |||
|library_id=CNhs12200 | |||
|library_id_phase_based=2:CNhs12200 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11385 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11385 | |||
|name=Dendritic Cells - plasmacytoid, donor3 | |name=Dendritic Cells - plasmacytoid, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12200,LSID976,release010,COMPLETED | |profile_hcage=CNhs12200,LSID976,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0.13718235424895,-0.27483329820609,-0.282403560576942,0,0,0,0,0,0,0,0,0,0.598972064137486,0,0,0,-0.153323010348428,0,0,0,0.068591177124475,0,-0.0979578962680575,0,0,0.00422576447008796,0,0,0,0,0,0,0,0,0,0,0,0,-0.0867721325172529,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0435542576184565,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0.841567182579038,0,0,0.50903374771113,0,0,0,0,0,0,0,0,0,0,-0.552571649267773,0,0,0,-0.0584468268118252,-0.211197402695869,0.120638104118337,0,0.120638104118337,0,0.227146151211132,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13718235424895,0,-0.096373593922461,0,0,0,-0.214455838206723,-0.866389966485779,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0.13718235424895,0.227146151211132,0,0,0,0,0,0,0,0,0,0,0,-0.247178875285564,0,0.470426434865938,-0.143515142523472,0,0,-0.127793054840827,0,0.455953942261803,0,0,0,0,0,0.241276208236673,0,-0.128119866952565,0,-0.0504125515893149,0,0.50903374771113,0,0,-0.0186252810838506,0.536094951680631,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,-0.201649492209849,0,-0.120879483793741,-0.0827201683234173,-0.221611588102807,-0.54046380892504,0.500614433486373,0,0,0,-0.204271823232506,-0.462051983125333,0,0,0.231409714378468,-0.112758441436184,0,0,-0.391044581551635,0,-0.0371709619295173,-0.208891172072454,0,-0.143468965211502,0,0,0,0,0,0,0,0,0,0,0,0.0796888874275135,-0.189806242430019,0,0,0,-0.076274512968765,-0.302720702777548,0,0,-0.373286155956567,-0.350736013296859,0.0818647934322795,-0.367868250379245,0,0.371052823149507,-0.0126132719091237,0.465233775330985,-0.171694176476016,-0.147401849371139,-0.189981719549847,0,-0.191601630113596,-0.229945698846456,0.102418584881549,-0.099185278239134,-0.0176861423167826,-1.2314085082871,0.130376956705143,0,0,-0.0775089264793031,-0.76514378723743,0,0,0.0662122157907817,0.0536827112711505,-0.53380508222676,-0.485290954308519,-0.482637040182754,0.176736140890864,-0.0395325284566706,-0.457436452896595,-0.0823744178953206,-0.352981147779225,-0.0483935221743862,0,-0.050826643960624,0.0187604812765927,0.696177075662796,0.269887486683757,-0.0270248130898286,-0.088506035927136,-0.0683442610773682,0.420783591289519,-0.504571548950368,0.0376471542689607,0,-0.0154900312121568,-0.337501022634739,0,0,0,0,0,-0.0750548276710812,0.197500806844421,0.0923259408932933,0,0.045644420249485,0,0.277437593310707,0,0.240407251901324,0.0391054466258672,0.0973972735225523,0.345167775654318,0,-0.298491739401217,-0.0976898048106268,-0.164990696339003,-0.422394805391737,-0.0584468268118252,1.02325376167969,0.287911192152546,-0.174232778919457,-0.463758362341388,0,-0.0881268324752877,-0.137469551293738,-0.642268542281707,-0.354316629172686,-0.172885600846097,-0.583529904229572,0,-0.413358790766317,0,0.128852913457955,0,0.0645465229510761,-0.215252249024402,0.198512205669868,-0.0183878771703521,0,0.252847510335997,-0.788130937773974,0,-0.190355180802361,-0.054305735800297,0,0.245104342549205,-0.697695966512583,0.0715784274781662,-0.138989456679195,0,-0.790080158389657,0,0,-0.324248180631776,-0.235476037764389,0,-0.432035078618461,-0.609202914213396,-0.604216041195295,-0.115971073434934,0,0,-0.645700337992725,0,0,0.131064886056557,-0.114297634767858,0.490356373751906,0.588240841092283,-0.114094543224401,-0.108622809454255,0,0,-0.177527765965176,0.556326930267555,-0.091169372502753,0,0,-0.181290119474349,-0.116628112990133,0,0,0,-0.126674513433289,0,0,0,0,0,0,0,-0.342109976860847,0.101120612045355,0,0.17409671147539,0,0,0,0,0,0,0,0,-1.351054630583,-0.221439452671813,-0.12301741567642,0,0,0.068591177124475,0,-0.0785410483045244,0.192234863789121,0,-0.131862706497632,0,0,0,0,0.0510413644597389,0,0,0,0.120638104118337,-0.057730457053664,-0.52308379245695,0,0,0,-0.27695440160179,0,0,0,0,0.293116322256933,0.241276208236673,0,-0.63193017338638,0,-0.376891242410607,0.159694328689831,0,0.290649934183614,-0.364096994037162,-1.17243798639951,0,0,-0.261347131789888,0,0,0.230252144546035,-0.0823702229656663,0,-0.00436557288505635,0,0,0.068591177124475,0,0,0.241276208236673,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,0.097972668732836,-0.0922240566585104,0,0,0,0,0,0,0,-0.0241060230789031,-0.336426027490733,0,0,0,0,0,0,0,0,-0.334243585414292,0,0,0,0,0,-0.0969923612426051,0,0,0,0,-0.564807121153884,0,0.241276208236673,-0.140179777944564,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.82873287655449,0,0,0,0,0,0.13718235424895,0,-0.27483329820609,0,0,0,0,1.58213049800258,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.068591177124475,0,0,0,-0.586972110453566,-0.0247755787802223,-0.0650953499482991,-0.0452527058611816,0,0,0.600245680008858,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0.241276208236673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106116145837915,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.643951828846596,0,0,0,0,0,0,-0.287976840656709,-0.283220399823148,-0.139531375381895,0,0,0,0.108205178741964,0,0,0,0,-0.0667773874189013,0,0,0.13718235424895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0.068591177124475,0,0,0,0,0,0,0.068591177124475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241276208236673,0,0,0.068591177124475,0,0,0,0,0.08662674084292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241276208236673,0,0,0,0,0,0.13718235424895,0,-0.0802473645015565,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0.13718235424895,0,0,0,0,0.41196308266828,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0.138778726099831,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.253610608288505,0,0,-0.24943730159848,0,0,0,0,0,0,0,0,0,0,0,0,-0.0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| |||
|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=3H100-72-5 | |rna_catalog_number=3H100-72-5 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=1 | |rna_weight_ug=1 | ||
|sample_age=24 | |sample_age=24 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.48688021041969e-213!GO:0043227;membrane-bound organelle;4.10222973482016e-192!GO:0043231;intracellular membrane-bound organelle;6.94154224478376e-192!GO:0043226;organelle;4.44280215473706e-178!GO:0043229;intracellular organelle;1.84714479877725e-177!GO:0005737;cytoplasm;1.16606910000455e-132!GO:0044422;organelle part;3.99552422278217e-116!GO:0044446;intracellular organelle part;1.68840167598237e-114!GO:0044444;cytoplasmic part;9.3320405715196e-99!GO:0043170;macromolecule metabolic process;3.10659960321609e-94!GO:0005634;nucleus;8.76764414507126e-94!GO:0044237;cellular metabolic process;6.29741792846688e-93!GO:0044238;primary metabolic process;1.5489124553837e-90!GO:0032991;macromolecular complex;1.61618677600182e-90!GO:0044428;nuclear part;6.96665347457522e-80!GO:0003723;RNA binding;3.98864558939047e-76!GO:0030529;ribonucleoprotein complex;1.44270382508667e-74!GO:0043283;biopolymer metabolic process;1.84356154355688e-66!GO:0043233;organelle lumen;6.10262595709049e-66!GO:0031974;membrane-enclosed lumen;6.10262595709049e-66!GO:0005515;protein binding;3.05052494086579e-57!GO:0010467;gene expression;6.69673737215278e-57!GO:0006396;RNA processing;1.39591467660641e-52!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.44602106507774e-52!GO:0019538;protein metabolic process;1.23072784544124e-48!GO:0031981;nuclear lumen;2.55025751765573e-48!GO:0044267;cellular protein metabolic process;1.15027561686326e-46!GO:0043234;protein complex;6.40308215538406e-46!GO:0006412;translation;1.26138816000287e-45!GO:0044260;cellular macromolecule metabolic process;2.35082007999863e-45!GO:0005739;mitochondrion;2.60177958209924e-45!GO:0016071;mRNA metabolic process;4.37039126224114e-45!GO:0033036;macromolecule localization;2.81543504298445e-43!GO:0031090;organelle membrane;3.94355380900061e-43!GO:0015031;protein transport;3.1301516532493e-42!GO:0045184;establishment of protein localization;4.45594607976206e-40!GO:0008380;RNA splicing;6.94269281653835e-40!GO:0008104;protein localization;5.52226487875125e-39!GO:0006397;mRNA processing;6.80751358503784e-39!GO:0005840;ribosome;8.46878512188552e-39!GO:0003676;nucleic acid binding;2.21775688567862e-37!GO:0009059;macromolecule biosynthetic process;1.35869106854076e-36!GO:0031967;organelle envelope;2.48377710839167e-35!GO:0031975;envelope;5.35529634294511e-35!GO:0003735;structural constituent of ribosome;4.70143889241266e-33!GO:0044429;mitochondrial part;9.24069379687689e-33!GO:0005654;nucleoplasm;2.36386787651129e-31!GO:0016070;RNA metabolic process;2.59698766449402e-31!GO:0033279;ribosomal subunit;2.59698766449402e-31!GO:0005829;cytosol;6.22793641594257e-31!GO:0016043;cellular component organization and biogenesis;3.10931104941188e-30!GO:0005681;spliceosome;2.46439431251585e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.1201264194615e-28!GO:0009058;biosynthetic process;3.98325033423595e-28!GO:0046907;intracellular transport;6.35494246653929e-28!GO:0044249;cellular biosynthetic process;1.57505392578072e-27!GO:0006886;intracellular protein transport;2.77768634805871e-27!GO:0006259;DNA metabolic process;5.31582627091339e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.79298131483845e-26!GO:0065003;macromolecular complex assembly;2.19982203935265e-26!GO:0044451;nucleoplasm part;2.74269794620147e-25!GO:0006512;ubiquitin cycle;2.17978015881948e-24!GO:0044445;cytosolic part;2.99109365016714e-23!GO:0019866;organelle inner membrane;6.95641236433146e-23!GO:0022607;cellular component assembly;2.92386894805141e-22!GO:0006996;organelle organization and biogenesis;6.24458242147476e-22!GO:0005740;mitochondrial envelope;9.39266763877666e-22!GO:0043412;biopolymer modification;1.94629121313979e-21!GO:0031966;mitochondrial membrane;4.08142498116995e-21!GO:0005743;mitochondrial inner membrane;2.70002835943354e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;2.70002835943354e-20!GO:0044257;cellular protein catabolic process;2.70002835943354e-20!GO:0000166;nucleotide binding;3.27338922384607e-20!GO:0006511;ubiquitin-dependent protein catabolic process;3.53206239524836e-20!GO:0019941;modification-dependent protein catabolic process;3.62543144692654e-20!GO:0043632;modification-dependent macromolecule catabolic process;3.62543144692654e-20!GO:0006119;oxidative phosphorylation;3.66179533309047e-20!GO:0051649;establishment of cellular localization;9.87380966931833e-20!GO:0051641;cellular localization;1.55059067972881e-19!GO:0044265;cellular macromolecule catabolic process;1.90826545028081e-19!GO:0012501;programmed cell death;2.97800777584166e-19!GO:0006915;apoptosis;3.39749450600959e-19!GO:0043285;biopolymer catabolic process;6.17386269997099e-19!GO:0006464;protein modification process;7.05879441719878e-19!GO:0044455;mitochondrial membrane part;2.0435926766962e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.05028716450417e-18!GO:0016462;pyrophosphatase activity;2.33320383183265e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.52710196191191e-18!GO:0022618;protein-RNA complex assembly;7.06336233582933e-18!GO:0008219;cell death;7.1356278457162e-18!GO:0016265;death;7.1356278457162e-18!GO:0017111;nucleoside-triphosphatase activity;7.73076942686513e-18!GO:0008134;transcription factor binding;8.95263157825782e-18!GO:0016604;nuclear body;1.4836345571593e-17!GO:0043687;post-translational protein modification;4.29900793410852e-17!GO:0012505;endomembrane system;4.45551379017422e-17!GO:0005730;nucleolus;7.1364828464791e-17!GO:0015934;large ribosomal subunit;7.45589024095829e-17!GO:0016874;ligase activity;2.30515430396224e-16!GO:0009057;macromolecule catabolic process;1.3349721709287e-15!GO:0015935;small ribosomal subunit;2.01237817314565e-15!GO:0030163;protein catabolic process;3.16096283751216e-15!GO:0016607;nuclear speck;4.33317742318216e-15!GO:0000502;proteasome complex (sensu Eukaryota);5.23260581219581e-15!GO:0050794;regulation of cellular process;1.0021043828021e-14!GO:0006974;response to DNA damage stimulus;1.09190180683883e-14!GO:0006457;protein folding;1.85930005493908e-14!GO:0005746;mitochondrial respiratory chain;2.3324824348165e-14!GO:0043228;non-membrane-bound organelle;3.23349944101928e-14!GO:0043232;intracellular non-membrane-bound organelle;3.23349944101928e-14!GO:0016887;ATPase activity;4.10055761519808e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;5.65311996925639e-14!GO:0048770;pigment granule;6.06432638537202e-14!GO:0042470;melanosome;6.06432638537202e-14!GO:0006605;protein targeting;7.16598811910554e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;7.3635753821587e-14!GO:0000375;RNA splicing, via transesterification reactions;7.3635753821587e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.3635753821587e-14!GO:0042623;ATPase activity, coupled;9.17699450863087e-14!GO:0005635;nuclear envelope;1.17334788923639e-13!GO:0007049;cell cycle;1.53885978772854e-13!GO:0032553;ribonucleotide binding;1.62936656997017e-13!GO:0032555;purine ribonucleotide binding;1.62936656997017e-13!GO:0008135;translation factor activity, nucleic acid binding;1.63676984775622e-13!GO:0044248;cellular catabolic process;1.88624077513207e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.05671454417683e-13!GO:0051276;chromosome organization and biogenesis;2.15649776437158e-13!GO:0006323;DNA packaging;2.55188549050605e-13!GO:0031980;mitochondrial lumen;3.04064303865208e-13!GO:0005759;mitochondrial matrix;3.04064303865208e-13!GO:0031965;nuclear membrane;3.08109299980362e-13!GO:0017076;purine nucleotide binding;3.84088958070432e-13!GO:0005524;ATP binding;5.15717401346059e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.87057960891403e-13!GO:0016192;vesicle-mediated transport;7.20685245049815e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.02966343822783e-12!GO:0003954;NADH dehydrogenase activity;1.02966343822783e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.02966343822783e-12!GO:0032559;adenyl ribonucleotide binding;1.13988274056026e-12!GO:0044453;nuclear membrane part;1.24635569722421e-12!GO:0006281;DNA repair;1.88616916007913e-12!GO:0005794;Golgi apparatus;1.88616916007913e-12!GO:0006913;nucleocytoplasmic transport;3.3344977989095e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.2108132121576e-12!GO:0019222;regulation of metabolic process;4.25619503293586e-12!GO:0030554;adenyl nucleotide binding;4.54443570495544e-12!GO:0051169;nuclear transport;5.88287019727826e-12!GO:0042981;regulation of apoptosis;1.84353332672666e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.06346684909536e-11!GO:0042773;ATP synthesis coupled electron transport;2.06346684909536e-11!GO:0006413;translational initiation;2.06346684909536e-11!GO:0004386;helicase activity;2.12003208219313e-11!GO:0043067;regulation of programmed cell death;2.37851602611003e-11!GO:0006446;regulation of translational initiation;2.42759831764029e-11!GO:0003712;transcription cofactor activity;2.49143099772894e-11!GO:0006793;phosphorus metabolic process;2.52235077767384e-11!GO:0006796;phosphate metabolic process;2.52235077767384e-11!GO:0042254;ribosome biogenesis and assembly;2.52235077767384e-11!GO:0006403;RNA localization;4.37014316676194e-11!GO:0030964;NADH dehydrogenase complex (quinone);4.9779395215214e-11!GO:0045271;respiratory chain complex I;4.9779395215214e-11!GO:0005747;mitochondrial respiratory chain complex I;4.9779395215214e-11!GO:0016568;chromatin modification;5.6249312429515e-11!GO:0050657;nucleic acid transport;5.9155201853971e-11!GO:0051236;establishment of RNA localization;5.9155201853971e-11!GO:0050658;RNA transport;5.9155201853971e-11!GO:0048193;Golgi vesicle transport;7.24033501815711e-11!GO:0008639;small protein conjugating enzyme activity;7.69024640533687e-11!GO:0004842;ubiquitin-protein ligase activity;1.09131104204487e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.16198701451334e-10!GO:0005694;chromosome;1.34826993862323e-10!GO:0008026;ATP-dependent helicase activity;1.43276506095176e-10!GO:0051082;unfolded protein binding;1.87869482427131e-10!GO:0031323;regulation of cellular metabolic process;2.23707826229295e-10!GO:0005783;endoplasmic reticulum;3.49276940512148e-10!GO:0005773;vacuole;4.49014950241291e-10!GO:0050789;regulation of biological process;4.61432292905243e-10!GO:0003743;translation initiation factor activity;4.736450622957e-10!GO:0005643;nuclear pore;5.39203882767855e-10!GO:0019787;small conjugating protein ligase activity;1.11239258535568e-09!GO:0019829;cation-transporting ATPase activity;1.36335497481442e-09!GO:0044432;endoplasmic reticulum part;1.36335497481442e-09!GO:0016787;hydrolase activity;1.45527901441763e-09!GO:0016310;phosphorylation;1.48398702485653e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.80761818581771e-09!GO:0048523;negative regulation of cellular process;1.80898151231525e-09!GO:0051028;mRNA transport;2.37340973317871e-09!GO:0008565;protein transporter activity;2.56279390524596e-09!GO:0005768;endosome;3.84905005810962e-09!GO:0000323;lytic vacuole;3.88996421817651e-09!GO:0005764;lysosome;3.88996421817651e-09!GO:0009259;ribonucleotide metabolic process;4.30239576581559e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.42331935900095e-09!GO:0022402;cell cycle process;5.09544921941638e-09!GO:0051246;regulation of protein metabolic process;5.44954696691264e-09!GO:0003713;transcription coactivator activity;5.62648916371092e-09!GO:0065002;intracellular protein transport across a membrane;5.76305438104457e-09!GO:0006366;transcription from RNA polymerase II promoter;5.91713884735371e-09!GO:0065004;protein-DNA complex assembly;6.22593508930601e-09!GO:0005761;mitochondrial ribosome;6.67525735155009e-09!GO:0000313;organellar ribosome;6.67525735155009e-09!GO:0051186;cofactor metabolic process;7.33959977985743e-09!GO:0051726;regulation of cell cycle;8.47810293636515e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.08397241234421e-09!GO:0015078;hydrogen ion transmembrane transporter activity;1.10188915488007e-08!GO:0000074;regulation of progression through cell cycle;1.13383103796981e-08!GO:0009719;response to endogenous stimulus;1.21449057523774e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.57275440715709e-08!GO:0017038;protein import;1.58601855859185e-08!GO:0044427;chromosomal part;1.62928265326805e-08!GO:0006333;chromatin assembly or disassembly;1.65360915660366e-08!GO:0010468;regulation of gene expression;1.67975010900379e-08!GO:0046930;pore complex;1.89473521701511e-08!GO:0007243;protein kinase cascade;2.06212742371872e-08!GO:0006163;purine nucleotide metabolic process;2.56314970311534e-08!GO:0006350;transcription;3.17896567028625e-08!GO:0015986;ATP synthesis coupled proton transport;3.36460845144958e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.36460845144958e-08!GO:0009260;ribonucleotide biosynthetic process;3.424442292294e-08!GO:0009150;purine ribonucleotide metabolic process;3.46497255023905e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.12303680595201e-08!GO:0016072;rRNA metabolic process;4.4822096035465e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.031713191348e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.63696112957629e-08!GO:0030532;small nuclear ribonucleoprotein complex;6.03236490890139e-08!GO:0006164;purine nucleotide biosynthetic process;6.03236490890139e-08!GO:0065009;regulation of a molecular function;6.23553077405114e-08!GO:0006364;rRNA processing;6.8712264151164e-08!GO:0009152;purine ribonucleotide biosynthetic process;7.74010177659744e-08!GO:0016881;acid-amino acid ligase activity;8.98047295207836e-08!GO:0043069;negative regulation of programmed cell death;9.27386405618809e-08!GO:0048519;negative regulation of biological process;9.75853322060189e-08!GO:0006732;coenzyme metabolic process;1.01251093559034e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.3200460882612e-07!GO:0009141;nucleoside triphosphate metabolic process;1.38453768320252e-07!GO:0005789;endoplasmic reticulum membrane;1.40340580930338e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.4307856679106e-07!GO:0004298;threonine endopeptidase activity;1.55549518144559e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.6385939741883e-07!GO:0043066;negative regulation of apoptosis;1.64139041676505e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.64418841118407e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.72705390753751e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.82298500324774e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.82298500324774e-07!GO:0031324;negative regulation of cellular metabolic process;1.87965440259884e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.11525758997417e-07!GO:0000785;chromatin;2.18950725528279e-07!GO:0009056;catabolic process;2.24691303838206e-07!GO:0016563;transcription activator activity;2.95406629138502e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.09967182905572e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.09967182905572e-07!GO:0006754;ATP biosynthetic process;3.26670815309436e-07!GO:0006753;nucleoside phosphate metabolic process;3.26670815309436e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.5297316688153e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.5297316688153e-07!GO:0046034;ATP metabolic process;4.30873387144073e-07!GO:0043566;structure-specific DNA binding;4.3275102530597e-07!GO:0009060;aerobic respiration;5.0420027992536e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.54334860014809e-07!GO:0065007;biological regulation;5.66398286387852e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.61474531290849e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.03243502591831e-07!GO:0005793;ER-Golgi intermediate compartment;7.93647007195185e-07!GO:0006399;tRNA metabolic process;8.1185003705019e-07!GO:0006417;regulation of translation;8.71125202077581e-07!GO:0032446;protein modification by small protein conjugation;8.71604109622831e-07!GO:0000151;ubiquitin ligase complex;8.91907301608102e-07!GO:0045786;negative regulation of progression through cell cycle;9.8454033508537e-07!GO:0016740;transferase activity;1.02560360009037e-06!GO:0044440;endosomal part;1.39036299436265e-06!GO:0010008;endosome membrane;1.39036299436265e-06!GO:0016567;protein ubiquitination;1.67177508395079e-06!GO:0003697;single-stranded DNA binding;2.00447797030622e-06!GO:0045259;proton-transporting ATP synthase complex;2.07253663035012e-06!GO:0006260;DNA replication;2.43488479763431e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.67601344045667e-06!GO:0032774;RNA biosynthetic process;2.69879223444818e-06!GO:0005770;late endosome;3.15180087390072e-06!GO:0006351;transcription, DNA-dependent;3.317762715936e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.73838057413178e-06!GO:0015399;primary active transmembrane transporter activity;3.73838057413178e-06!GO:0006916;anti-apoptosis;3.99490601812017e-06!GO:0051170;nuclear import;3.99540753978567e-06!GO:0007242;intracellular signaling cascade;4.15448745944549e-06!GO:0003724;RNA helicase activity;4.2262208941832e-06!GO:0045333;cellular respiration;4.23136354057672e-06!GO:0006606;protein import into nucleus;4.86386380097764e-06!GO:0000245;spliceosome assembly;5.7102069326787e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.89964032009415e-06!GO:0005774;vacuolar membrane;5.94820253372562e-06!GO:0051168;nuclear export;6.89345650893346e-06!GO:0006613;cotranslational protein targeting to membrane;6.96790401036246e-06!GO:0009055;electron carrier activity;7.81247776404734e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.01138668270821e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;9.25161238224206e-06!GO:0007005;mitochondrion organization and biogenesis;9.65034984705114e-06!GO:0045449;regulation of transcription;9.75951465846682e-06!GO:0016481;negative regulation of transcription;1.0843594354274e-05!GO:0031326;regulation of cellular biosynthetic process;1.11587789260121e-05!GO:0050790;regulation of catalytic activity;1.11587789260121e-05!GO:0044431;Golgi apparatus part;1.16027202824519e-05!GO:0008234;cysteine-type peptidase activity;1.30639615670401e-05!GO:0016779;nucleotidyltransferase activity;1.34308560590324e-05!GO:0019899;enzyme binding;1.34308560590324e-05!GO:0009892;negative regulation of metabolic process;1.38508234513813e-05!GO:0006461;protein complex assembly;1.4746966268646e-05!GO:0016564;transcription repressor activity;1.53780113411863e-05!GO:0051188;cofactor biosynthetic process;1.67064139392144e-05!GO:0048475;coated membrane;1.6867103046488e-05!GO:0030117;membrane coat;1.6867103046488e-05!GO:0006099;tricarboxylic acid cycle;1.87127478330627e-05!GO:0046356;acetyl-CoA catabolic process;1.87127478330627e-05!GO:0006401;RNA catabolic process;1.93185274646432e-05!GO:0005765;lysosomal membrane;1.95298449051691e-05!GO:0044437;vacuolar part;2.17228483032977e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.30150229843275e-05!GO:0030120;vesicle coat;3.00335015439149e-05!GO:0030662;coated vesicle membrane;3.00335015439149e-05!GO:0005813;centrosome;3.97426495981019e-05!GO:0016363;nuclear matrix;4.14010714467419e-05!GO:0006084;acetyl-CoA metabolic process;4.59023017644751e-05!GO:0009108;coenzyme biosynthetic process;4.59023017644751e-05!GO:0009615;response to virus;5.10524709176222e-05!GO:0006261;DNA-dependent DNA replication;5.23294309504273e-05!GO:0009889;regulation of biosynthetic process;5.26576760950012e-05!GO:0008654;phospholipid biosynthetic process;5.31315394368209e-05!GO:0008270;zinc ion binding;6.31322248725012e-05!GO:0006402;mRNA catabolic process;7.02636422745038e-05!GO:0006752;group transfer coenzyme metabolic process;7.81495187428235e-05!GO:0031497;chromatin assembly;8.47964906282049e-05!GO:0000278;mitotic cell cycle;8.99475925755489e-05!GO:0006352;transcription initiation;9.34428004185959e-05!GO:0005815;microtubule organizing center;9.86569233726775e-05!GO:0008186;RNA-dependent ATPase activity;0.000110596118620202!GO:0006334;nucleosome assembly;0.000115553020025424!GO:0006355;regulation of transcription, DNA-dependent;0.000115995652800549!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000120941493167875!GO:0004812;aminoacyl-tRNA ligase activity;0.000120941493167875!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000120941493167875!GO:0043492;ATPase activity, coupled to movement of substances;0.000133633609436141!GO:0009109;coenzyme catabolic process;0.000136608544567427!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000143747253920511!GO:0006612;protein targeting to membrane;0.000144897407953655!GO:0006818;hydrogen transport;0.000145996033215355!GO:0043065;positive regulation of apoptosis;0.000154603669955213!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000182266415090305!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000185536540222983!GO:0003729;mRNA binding;0.000200258406807307!GO:0009117;nucleotide metabolic process;0.000202419195325459!GO:0015992;proton transport;0.000208178262580983!GO:0043068;positive regulation of programmed cell death;0.000221100131261773!GO:0016197;endosome transport;0.000233492302246958!GO:0043038;amino acid activation;0.000240887896907757!GO:0006418;tRNA aminoacylation for protein translation;0.000240887896907757!GO:0043039;tRNA aminoacylation;0.000240887896907757!GO:0031982;vesicle;0.00024276662184487!GO:0008047;enzyme activator activity;0.000259956883131224!GO:0031072;heat shock protein binding;0.000268600961482316!GO:0005885;Arp2/3 protein complex;0.000294449300618029!GO:0004004;ATP-dependent RNA helicase activity;0.000336471782229315!GO:0005667;transcription factor complex;0.000338542467714426!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000367626531494301!GO:0051427;hormone receptor binding;0.000390371394270854!GO:0007264;small GTPase mediated signal transduction;0.000417162386871783!GO:0051187;cofactor catabolic process;0.000419517294445353!GO:0003899;DNA-directed RNA polymerase activity;0.000432365231025955!GO:0003677;DNA binding;0.000456087170161542!GO:0005798;Golgi-associated vesicle;0.000460222623616205!GO:0022890;inorganic cation transmembrane transporter activity;0.000474502850300138!GO:0006950;response to stress;0.000507275621151917!GO:0016251;general RNA polymerase II transcription factor activity;0.000533827937140437!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000545850130231556!GO:0006917;induction of apoptosis;0.000606095922119691!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000613286820359104!GO:0030384;phosphoinositide metabolic process;0.000613638321740209!GO:0043021;ribonucleoprotein binding;0.000661026626695287!GO:0000139;Golgi membrane;0.000672458595759423!GO:0031410;cytoplasmic vesicle;0.000694647740615898!GO:0035257;nuclear hormone receptor binding;0.000714171568580848!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00073213994231884!GO:0008632;apoptotic program;0.000813190298440161!GO:0033116;ER-Golgi intermediate compartment membrane;0.000813190298440161!GO:0003690;double-stranded DNA binding;0.000813190298440161!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000833511429600581!GO:0012502;induction of programmed cell death;0.000841162097406947!GO:0009967;positive regulation of signal transduction;0.000843178005832166!GO:0031902;late endosome membrane;0.000885333779502299!GO:0046914;transition metal ion binding;0.00106639822851384!GO:0005762;mitochondrial large ribosomal subunit;0.00109780913333181!GO:0000315;organellar large ribosomal subunit;0.00109780913333181!GO:0046489;phosphoinositide biosynthetic process;0.00111717971545997!GO:0006414;translational elongation;0.00116421301080663!GO:0030176;integral to endoplasmic reticulum membrane;0.00121779310953291!GO:0004674;protein serine/threonine kinase activity;0.00121779310953291!GO:0003924;GTPase activity;0.00123802951965463!GO:0046474;glycerophospholipid biosynthetic process;0.00125501936758077!GO:0007050;cell cycle arrest;0.00125630589206664!GO:0006310;DNA recombination;0.00134894425664794!GO:0043087;regulation of GTPase activity;0.00136241793055226!GO:0004518;nuclease activity;0.00136740042597653!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00136740042597653!GO:0019783;small conjugating protein-specific protease activity;0.00146011227849019!GO:0006650;glycerophospholipid metabolic process;0.00150721309558509!GO:0006405;RNA export from nucleus;0.00151861899945437!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0015310045052742!GO:0009165;nucleotide biosynthetic process;0.00159724331472597!GO:0045454;cell redox homeostasis;0.00160370832839721!GO:0003714;transcription corepressor activity;0.00166905197415468!GO:0051336;regulation of hydrolase activity;0.00184990482594719!GO:0030695;GTPase regulator activity;0.00193857532690073!GO:0003725;double-stranded RNA binding;0.00194136279485003!GO:0030433;ER-associated protein catabolic process;0.00194664473246083!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00194664473246083!GO:0043623;cellular protein complex assembly;0.00195259948421472!GO:0003711;transcription elongation regulator activity;0.00200996278290599!GO:0005769;early endosome;0.00202854864369207!GO:0004843;ubiquitin-specific protease activity;0.0020955512032368!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00220610803431536!GO:0007034;vacuolar transport;0.00223629189461796!GO:0046467;membrane lipid biosynthetic process;0.00223629189461796!GO:0005637;nuclear inner membrane;0.00227651061537405!GO:0006672;ceramide metabolic process;0.00236411421048099!GO:0004527;exonuclease activity;0.00237811262697604!GO:0006611;protein export from nucleus;0.00247624489344392!GO:0006891;intra-Golgi vesicle-mediated transport;0.00254845088995967!GO:0016044;membrane organization and biogenesis;0.00254845088995967!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00262128101559911!GO:0003678;DNA helicase activity;0.00268498316776373!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00292487424692383!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00292487424692383!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00292487424692383!GO:0006383;transcription from RNA polymerase III promoter;0.00306081997117287!GO:0048500;signal recognition particle;0.00308704778249502!GO:0008168;methyltransferase activity;0.00319355331989141!GO:0016741;transferase activity, transferring one-carbon groups;0.00319837372383464!GO:0008287;protein serine/threonine phosphatase complex;0.00332703162017397!GO:0046519;sphingoid metabolic process;0.00332839322423111!GO:0046966;thyroid hormone receptor binding;0.00342650972385997!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00352615392016141!GO:0005048;signal sequence binding;0.00353759779846618!GO:0005096;GTPase activator activity;0.00358647575971629!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00380021038450913!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00380021038450913!GO:0007265;Ras protein signal transduction;0.00384807573338281!GO:0051252;regulation of RNA metabolic process;0.00385651733645365!GO:0008033;tRNA processing;0.00394362057200015!GO:0015631;tubulin binding;0.00395216997708661!GO:0005684;U2-dependent spliceosome;0.00412528626080813!GO:0004221;ubiquitin thiolesterase activity;0.00421707456293621!GO:0003682;chromatin binding;0.00421813548781383!GO:0060090;molecular adaptor activity;0.00447052736767878!GO:0048522;positive regulation of cellular process;0.0045489542954465!GO:0031252;leading edge;0.00456319518431616!GO:0048471;perinuclear region of cytoplasm;0.00456319518431616!GO:0051789;response to protein stimulus;0.00458525900069058!GO:0006986;response to unfolded protein;0.00458525900069058!GO:0045892;negative regulation of transcription, DNA-dependent;0.00495325308078829!GO:0051301;cell division;0.00495707372281329!GO:0043681;protein import into mitochondrion;0.00510343117614456!GO:0031988;membrane-bound vesicle;0.00520415880181112!GO:0044452;nucleolar part;0.00520984563665712!GO:0022403;cell cycle phase;0.00521941139160529!GO:0031625;ubiquitin protein ligase binding;0.00521941139160529!GO:0006607;NLS-bearing substrate import into nucleus;0.00521941139160529!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00534032651190175!GO:0045047;protein targeting to ER;0.00534032651190175!GO:0043488;regulation of mRNA stability;0.0053890619457025!GO:0043487;regulation of RNA stability;0.0053890619457025!GO:0005669;transcription factor TFIID complex;0.00552962031190805!GO:0006338;chromatin remodeling;0.00553693592746873!GO:0042613;MHC class II protein complex;0.00563310968987381!GO:0004722;protein serine/threonine phosphatase activity;0.00571611725815484!GO:0009966;regulation of signal transduction;0.00580582054287998!GO:0016853;isomerase activity;0.00586578151802361!GO:0005788;endoplasmic reticulum lumen;0.00620088180502944!GO:0032318;regulation of Ras GTPase activity;0.00625679340812557!GO:0008312;7S RNA binding;0.00635526732328998!GO:0015923;mannosidase activity;0.00646261555903629!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00646261555903629!GO:0045045;secretory pathway;0.00649225322994369!GO:0030658;transport vesicle membrane;0.00658635917310763!GO:0030880;RNA polymerase complex;0.00660008401787158!GO:0051338;regulation of transferase activity;0.00684311001500776!GO:0005525;GTP binding;0.00684311001500776!GO:0016859;cis-trans isomerase activity;0.00684311001500776!GO:0000314;organellar small ribosomal subunit;0.00692302201087783!GO:0005763;mitochondrial small ribosomal subunit;0.00692302201087783!GO:0006302;double-strand break repair;0.00711105982274743!GO:0004197;cysteine-type endopeptidase activity;0.00719503216898841!GO:0051329;interphase of mitotic cell cycle;0.00723759921779714!GO:0022415;viral reproductive process;0.00756101393119115!GO:0032940;secretion by cell;0.00776736293276312!GO:0030258;lipid modification;0.00796741571147632!GO:0005083;small GTPase regulator activity;0.00796741571147632!GO:0031968;organelle outer membrane;0.00815117447224209!GO:0016272;prefoldin complex;0.00816438127024402!GO:0006368;RNA elongation from RNA polymerase II promoter;0.00844008543868015!GO:0030521;androgen receptor signaling pathway;0.00865300493855521!GO:0006516;glycoprotein catabolic process;0.00866845857037849!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00929587585325328!GO:0016311;dephosphorylation;0.00955947408071704!GO:0016023;cytoplasmic membrane-bound vesicle;0.0095782117017619!GO:0006354;RNA elongation;0.00970710101164843!GO:0007006;mitochondrial membrane organization and biogenesis;0.00983387767238724!GO:0000082;G1/S transition of mitotic cell cycle;0.00985909912430281!GO:0043549;regulation of kinase activity;0.0099916514813928!GO:0051052;regulation of DNA metabolic process;0.0102605922037789!GO:0043022;ribosome binding;0.0102862087143947!GO:0008017;microtubule binding;0.0102862087143947!GO:0005819;spindle;0.0102862087143947!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0102862087143947!GO:0000428;DNA-directed RNA polymerase complex;0.0102862087143947!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0102862087143947!GO:0019867;outer membrane;0.0105360019987278!GO:0008139;nuclear localization sequence binding;0.010602349066595!GO:0018193;peptidyl-amino acid modification;0.0106400036364097!GO:0006595;polyamine metabolic process;0.0106518708161513!GO:0032200;telomere organization and biogenesis;0.0106586057018161!GO:0000723;telomere maintenance;0.0106586057018161!GO:0008320;protein transmembrane transporter activity;0.0107424397554358!GO:0004576;oligosaccharyl transferase activity;0.0108405757799841!GO:0017091;AU-rich element binding;0.010912442624946!GO:0050779;RNA destabilization;0.010912442624946!GO:0000289;poly(A) tail shortening;0.010912442624946!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0109861960180119!GO:0015002;heme-copper terminal oxidase activity;0.0109861960180119!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0109861960180119!GO:0004129;cytochrome-c oxidase activity;0.0109861960180119!GO:0016790;thiolester hydrolase activity;0.0119421506480515!GO:0047485;protein N-terminus binding;0.0120328678581292!GO:0045947;negative regulation of translational initiation;0.0121111359536256!GO:0005070;SH3/SH2 adaptor activity;0.012145770423501!GO:0000118;histone deacetylase complex;0.0123996545170647!GO:0043506;regulation of JNK activity;0.0130769241881894!GO:0030127;COPII vesicle coat;0.0132230274541681!GO:0012507;ER to Golgi transport vesicle membrane;0.0132230274541681!GO:0051325;interphase;0.0133489340522844!GO:0003684;damaged DNA binding;0.013449258395589!GO:0016584;nucleosome positioning;0.013449258395589!GO:0007041;lysosomal transport;0.0136627325617594!GO:0005869;dynactin complex;0.0136627325617594!GO:0046822;regulation of nucleocytoplasmic transport;0.0139219996787392!GO:0000287;magnesium ion binding;0.0140845532549096!GO:0030518;steroid hormone receptor signaling pathway;0.0141648819639528!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0142780663866961!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0143414126611009!GO:0016788;hydrolase activity, acting on ester bonds;0.0145628555638884!GO:0030660;Golgi-associated vesicle membrane;0.0147478186299565!GO:0022884;macromolecule transmembrane transporter activity;0.0150454075314662!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0150454075314662!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0153755859997932!GO:0004667;prostaglandin-D synthase activity;0.0153755859997932!GO:0050802;circadian sleep/wake cycle, sleep;0.0153755859997932!GO:0022410;circadian sleep/wake cycle process;0.0153755859997932!GO:0042749;regulation of circadian sleep/wake cycle;0.0153755859997932!GO:0006497;protein amino acid lipidation;0.0154779978569707!GO:0006626;protein targeting to mitochondrion;0.0159784740281565!GO:0003746;translation elongation factor activity;0.0159808851339508!GO:0051348;negative regulation of transferase activity;0.0163729386143351!GO:0008276;protein methyltransferase activity;0.016474457480869!GO:0006376;mRNA splice site selection;0.0174557537560515!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0174557537560515!GO:0031901;early endosome membrane;0.0179763631532365!GO:0045859;regulation of protein kinase activity;0.0179903718862786!GO:0006506;GPI anchor biosynthetic process;0.018214807689023!GO:0004402;histone acetyltransferase activity;0.0184003922164115!GO:0004468;lysine N-acetyltransferase activity;0.0184003922164115!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0186303188996057!GO:0001667;ameboidal cell migration;0.0187106163643105!GO:0032027;myosin light chain binding;0.0187106163643105!GO:0031124;mRNA 3'-end processing;0.0192201236018154!GO:0030134;ER to Golgi transport vesicle;0.019308533362932!GO:0051920;peroxiredoxin activity;0.0198304924848361!GO:0006643;membrane lipid metabolic process;0.0198803742989813!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0202397691659898!GO:0008250;oligosaccharyl transferase complex;0.0204956134440772!GO:0019843;rRNA binding;0.0208725899487583!GO:0007040;lysosome organization and biogenesis;0.0208725899487583!GO:0030867;rough endoplasmic reticulum membrane;0.0215692091409325!GO:0030663;COPI coated vesicle membrane;0.0215692091409325!GO:0030126;COPI vesicle coat;0.0215692091409325!GO:0051090;regulation of transcription factor activity;0.0216827746513723!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0218271458898432!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0220860016708107!GO:0030118;clathrin coat;0.0221056254775017!GO:0000087;M phase of mitotic cell cycle;0.022255617586533!GO:0016301;kinase activity;0.022255617586533!GO:0015980;energy derivation by oxidation of organic compounds;0.022255617586533!GO:0033673;negative regulation of kinase activity;0.022255617586533!GO:0006469;negative regulation of protein kinase activity;0.022255617586533!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.022255617586533!GO:0005657;replication fork;0.022346776782942!GO:0005791;rough endoplasmic reticulum;0.0224648223681901!GO:0051087;chaperone binding;0.0232221636877815!GO:0048487;beta-tubulin binding;0.023262716700554!GO:0005741;mitochondrial outer membrane;0.0238645787331347!GO:0030041;actin filament polymerization;0.0239976633022335!GO:0007067;mitosis;0.0247512809102789!GO:0005099;Ras GTPase activator activity;0.0250042204027517!GO:0043414;biopolymer methylation;0.0250724412854657!GO:0015630;microtubule cytoskeleton;0.0251365244487595!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.025153465804578!GO:0006984;ER-nuclear signaling pathway;0.0254569920748812!GO:0006406;mRNA export from nucleus;0.0254575222144325!GO:0008097;5S rRNA binding;0.025837274268748!GO:0008408;3'-5' exonuclease activity;0.026041700621406!GO:0031647;regulation of protein stability;0.0264608175866246!GO:0051059;NF-kappaB binding;0.0269575508194764!GO:0022411;cellular component disassembly;0.0270159287953205!GO:0030522;intracellular receptor-mediated signaling pathway;0.0277102771940683!GO:0045368;positive regulation of interleukin-13 biosynthetic process;0.0278655169967816!GO:0045366;regulation of interleukin-13 biosynthetic process;0.0278655169967816!GO:0006505;GPI anchor metabolic process;0.0280073237098509!GO:0006839;mitochondrial transport;0.0281252608947944!GO:0005057;receptor signaling protein activity;0.0282699754847499!GO:0000049;tRNA binding;0.0285940940200471!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0286040849942775!GO:0000786;nucleosome;0.0287031888784705!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0291796410395667!GO:0042802;identical protein binding;0.0294943849356359!GO:0030119;AP-type membrane coat adaptor complex;0.0297090575136479!GO:0030968;unfolded protein response;0.0297090575136479!GO:0006914;autophagy;0.0297298191529328!GO:0040029;regulation of gene expression, epigenetic;0.0297759438861076!GO:0022406;membrane docking;0.0306324926261963!GO:0048278;vesicle docking;0.0306324926261963!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.031632981822281!GO:0007021;tubulin folding;0.0317310361606076!GO:0016605;PML body;0.031826693539394!GO:0005784;translocon complex;0.0319235866072613!GO:0007033;vacuole organization and biogenesis;0.0319235866072613!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.032084896903345!GO:0032561;guanyl ribonucleotide binding;0.0324569274768329!GO:0019001;guanyl nucleotide binding;0.0324569274768329!GO:0019747;regulation of isoprenoid metabolic process;0.0325597881346064!GO:0006468;protein amino acid phosphorylation;0.0325606396417791!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0325606396417791!GO:0004278;granzyme B activity;0.0333766126607682!GO:0031301;integral to organelle membrane;0.0335279727734403!GO:0004177;aminopeptidase activity;0.0339794610948896!GO:0005095;GTPase inhibitor activity;0.0344741422449585!GO:0048468;cell development;0.0347428044182164!GO:0006904;vesicle docking during exocytosis;0.0348566517471009!GO:0006091;generation of precursor metabolites and energy;0.0349620838085115!GO:0007259;JAK-STAT cascade;0.0360255609221373!GO:0051235;maintenance of localization;0.0362063825022868!GO:0002757;immune response-activating signal transduction;0.0362274205619383!GO:0030137;COPI-coated vesicle;0.0368708303639985!GO:0008637;apoptotic mitochondrial changes;0.0368876592863817!GO:0018196;peptidyl-asparagine modification;0.0370455848031208!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0370455848031208!GO:0043306;positive regulation of mast cell degranulation;0.0370613004901049!GO:0045921;positive regulation of exocytosis;0.0370613004901049!GO:0043302;positive regulation of leukocyte degranulation;0.0370613004901049!GO:0016279;protein-lysine N-methyltransferase activity;0.0381314391496357!GO:0018024;histone-lysine N-methyltransferase activity;0.0381314391496357!GO:0016278;lysine N-methyltransferase activity;0.0381314391496357!GO:0016791;phosphoric monoester hydrolase activity;0.0383775288362943!GO:0004003;ATP-dependent DNA helicase activity;0.0383775288362943!GO:0048518;positive regulation of biological process;0.0383775288362943!GO:0000119;mediator complex;0.0384862409581784!GO:0008094;DNA-dependent ATPase activity;0.0387589517286784!GO:0006596;polyamine biosynthetic process;0.0391663344728723!GO:0006275;regulation of DNA replication;0.0397559243580495!GO:0042158;lipoprotein biosynthetic process;0.0397970654560464!GO:0016601;Rac protein signal transduction;0.0398050423443463!GO:0000781;chromosome, telomeric region;0.0398860224324105!GO:0000339;RNA cap binding;0.0399073487800992!GO:0019210;kinase inhibitor activity;0.0400413281444732!GO:0051092;activation of NF-kappaB transcription factor;0.0402090070884792!GO:0030133;transport vesicle;0.0402100864011285!GO:0000776;kinetochore;0.0403633213842329!GO:0007004;telomere maintenance via telomerase;0.0403633213842329!GO:0006897;endocytosis;0.0403633213842329!GO:0010324;membrane invagination;0.0403633213842329!GO:0016585;chromatin remodeling complex;0.0404553101927522!GO:0008180;signalosome;0.0404553101927522!GO:0004532;exoribonuclease activity;0.0406576322286567!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0406576322286567!GO:0008159;positive transcription elongation factor activity;0.0407291286228827!GO:0051539;4 iron, 4 sulfur cluster binding;0.0407291286228827!GO:0051223;regulation of protein transport;0.0408981942335791!GO:0003756;protein disulfide isomerase activity;0.0409275050695943!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0409275050695943!GO:0006644;phospholipid metabolic process;0.041102823364412!GO:0019058;viral infectious cycle;0.041102823364412!GO:0033033;negative regulation of myeloid cell apoptosis;0.0418863962224002!GO:0001803;regulation of type III hypersensitivity;0.0418863962224002!GO:0032733;positive regulation of interleukin-10 production;0.0418863962224002!GO:0033025;regulation of mast cell apoptosis;0.0418863962224002!GO:0001805;positive regulation of type III hypersensitivity;0.0418863962224002!GO:0033023;mast cell homeostasis;0.0418863962224002!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0418863962224002!GO:0033032;regulation of myeloid cell apoptosis;0.0418863962224002!GO:0001802;type III hypersensitivity;0.0418863962224002!GO:0033028;myeloid cell apoptosis;0.0418863962224002!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0418863962224002!GO:0033026;negative regulation of mast cell apoptosis;0.0418863962224002!GO:0033024;mast cell apoptosis;0.0418863962224002!GO:0043507;positive regulation of JNK activity;0.0428045188526981!GO:0032507;maintenance of cellular protein localization;0.0432763350831229!GO:0031123;RNA 3'-end processing;0.043516868797181!GO:0046854;phosphoinositide phosphorylation;0.0439475346744043!GO:0000303;response to superoxide;0.0440171814873909!GO:0043621;protein self-association;0.0441327156111623!GO:0044438;microbody part;0.0449896325386795!GO:0044439;peroxisomal part;0.0449896325386795!GO:0033130;acetylcholine receptor binding;0.0462994227558823!GO:0042054;histone methyltransferase activity;0.0465745601088643!GO:0008022;protein C-terminus binding;0.0481708871252641!GO:0016407;acetyltransferase activity;0.0486059973472425!GO:0004860;protein kinase inhibitor activity;0.048701239558575!GO:0044262;cellular carbohydrate metabolic process;0.0489508851204457!GO:0032259;methylation;0.0490786450844683!GO:0000726;non-recombinational repair;0.0490786450844683!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0493869631762556!GO:0002819;regulation of adaptive immune response;0.0493869631762556!GO:0030145;manganese ion binding;0.0494084203769828 | |||
|sample_id=11385 | |sample_id=11385 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=NANOG{mouse}:2.41180922733;LMO2:2.10762416144;ELF1,2,4:1.79895356081;CREB1:1.63985312305;PAX2:1.59799504592;PAX6:1.58628183383;SPI1:1.56811327435;ATF5_CREB3:1.55339792126;RUNX1..3:1.52442424666;NANOG:1.52280938185;NFKB1_REL_RELA:1.50442318965;NFIL3:1.41512526839;FOXN1:1.34587585484;DMAP1_NCOR{1,2}_SMARC:1.33135834747;RFX2..5_RFXANK_RFXAP:1.33034862454;TGIF1:1.32570674494;SPIB:1.30780362217;EN1,2:1.29857451045;HMX1:1.23000136013;FOXQ1:1.21136900652;ETS1,2:1.20832828161;TLX2:1.17376880174;ELK1,4_GABP{A,B1}:1.1212073221;NHLH1,2:1.05674178052;ATF4:1.04825428739;MYB:0.996268088753;AIRE:0.987668484787;FOX{F1,F2,J1}:0.958747553881;HIF1A:0.958462890387;BREu{core}:0.898852644092;MYOD1:0.868925250884;RORA:0.847216473155;PDX1:0.835584921581;CRX:0.826645070106;MYFfamily:0.773379288669;IRF1,2:0.68237321812;ZEB1:0.632495815521;FOXA2:0.629683803488;POU2F1..3:0.566172469098;BPTF:0.553741803833;TFAP4:0.516025158357;RXRA_VDR{dimer}:0.515533028735;SMAD1..7,9:0.512495556253;ALX1:0.509739620319;NR5A1,2:0.492358619109;FOX{D1,D2}:0.474530280154;SREBF1,2:0.464065146458;PAX3,7:0.455789306487;XBP1:0.439843520816;ESR1:0.436414478634;ESRRA:0.399455387541;EP300:0.378071075664;OCT4_SOX2{dimer}:0.352442235464;ATF6:0.338494593117;ZNF148:0.323225102364;TAL1_TCF{3,4,12}:0.320966316765;MEF2{A,B,C,D}:0.317441970159;PAX8:0.297580174103;FOXD3:0.294027647678;RBPJ:0.26767292937;IRF7:0.264043863668;GATA6:0.257112851364;PPARG:0.254111588869;FOX{I1,J2}:0.247404096628;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.241982906479;FOXO1,3,4:0.241266246074;NR6A1:0.218611414018;JUN:0.193088847805;ATF2:0.147485115797;LEF1_TCF7_TCF7L1,2:0.115944975175;MAFB:0.115193171475;SNAI1..3:0.113841119692;ZNF238:0.11186173267;CUX2:0.104791425782;HBP1_HMGB_SSRP1_UBTF:0.10198165223;BACH2:0.0973081545076;YY1:0.0954145198789;HMGA1,2:0.0952664817989;FOSL2:0.0639095619535;SOX2:0.0501435224496;POU5F1:0.0235507338428;HAND1,2:0.0189049558198;CDX1,2,4:0.00746169897165;FOS_FOS{B,L1}_JUN{B,D}:-0.018217850043;STAT1,3:-0.0307135586947;EGR1..3:-0.106261811653;AR:-0.108379213416;PRRX1,2:-0.110170586371;CEBPA,B_DDIT3:-0.116170131369;ZFP161:-0.125399107176;HNF4A_NR2F1,2:-0.147787003571;SOX{8,9,10}:-0.1501123314;NFE2:-0.15151924647;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.158963745692;HLF:-0.16010017759;CDC5L:-0.225144355278;NFATC1..3:-0.230265232724;NRF1:-0.231549254906;DBP:-0.233489682462;T:-0.233752943822;EVI1:-0.248085692704;NFY{A,B,C}:-0.256494430086;HOXA9_MEIS1:-0.266033310931;HNF1A:-0.287141151135;SOX5:-0.29029688353;HSF1,2:-0.308891925771;TFAP2{A,C}:-0.309798832;MED-1{core}:-0.316968763223;NFIX:-0.324949468307;E2F1..5:-0.334668048645;FOXP3:-0.339925678352;POU1F1:-0.351929364271;ALX4:-0.353661620351;SOX17:-0.379063925905;ZBTB6:-0.379886686347;PAX4:-0.390047205019;NKX2-2,8:-0.397625724955;bHLH_family:-0.411358121535;STAT5{A,B}:-0.414109550213;ZBTB16:-0.436179354001;NKX3-2:-0.439088964409;RFX1:-0.445556263445;NFE2L2:-0.466704333582;FOXP1:-0.474094396429;ZNF143:-0.478236960646;REST:-0.503072108745;STAT2,4,6:-0.515949621627;TFCP2:-0.51612692468;FOXL1:-0.516762854377;NKX2-3_NKX2-5:-0.553952163231;AHR_ARNT_ARNT2:-0.554214245046;PATZ1:-0.555705272393;MZF1:-0.581227095152;HES1:-0.600666911003;HOX{A4,D4}:-0.610720666718;GLI1..3:-0.628053549961;PRDM1:-0.633134102932;PAX5:-0.636321373486;GATA4:-0.638238275302;NR3C1:-0.647481934971;NKX3-1:-0.713400774831;GZF1:-0.714640283921;MTF1:-0.722280842845;PBX1:-0.732116420749;MAZ:-0.760171964046;SPZ1:-0.781276537055;HOX{A6,A7,B6,B7}:-0.786154674971;NKX2-1,4:-0.788135186749;ARID5B:-0.800987849333;HOX{A5,B5}:-0.803506868874;SP1:-0.810239477118;NR1H4:-0.811815744518;RREB1:-0.824269349493;RXR{A,B,G}:-0.827658020507;MTE{core}:-0.831153115363;TP53:-0.838794819237;TBP:-0.867218379889;SRF:-0.877325080015;GTF2A1,2:-0.889841184344;ZNF384:-0.910913527061;LHX3,4:-0.922350152463;HIC1:-0.932613297592;GCM1,2:-0.946801105353;IKZF2:-0.947412652906;TEF:-0.968065871032;MYBL2:-0.969079910674;TFAP2B:-0.977090382798;GFI1:-1.00181465941;POU3F1..4:-1.14773621119;VSX1,2:-1.19964361573;EBF1:-1.20147359058;NKX6-1,2:-1.20530876198;TBX4,5:-1.21809883655;ADNP_IRX_SIX_ZHX:-1.30418788038;NFE2L1:-1.34860658828;TFDP1:-1.36988778508;ONECUT1,2:-1.37420230539;GFI1B:-1.41517358813;TEAD1:-1.43267973393;GTF2I:-1.45859109241;POU6F1:-1.46739940265;UFEwm:-1.47718114504;TOPORS:-1.53113681252;KLF4:-1.55579258653;PITX1..3:-1.60810805939;XCPE1{core}:-1.61039480615;ZIC1..3:-1.63084051036;ZNF423:-1.6819076308;IKZF1:-1.69088130414;TLX1..3_NFIC{dimer}:-1.90133033868;PAX1,9:-2.02954694869;FOXM1:-2.37362433497 | |top_motifs=NANOG{mouse}:2.41180922733;LMO2:2.10762416144;ELF1,2,4:1.79895356081;CREB1:1.63985312305;PAX2:1.59799504592;PAX6:1.58628183383;SPI1:1.56811327435;ATF5_CREB3:1.55339792126;RUNX1..3:1.52442424666;NANOG:1.52280938185;NFKB1_REL_RELA:1.50442318965;NFIL3:1.41512526839;FOXN1:1.34587585484;DMAP1_NCOR{1,2}_SMARC:1.33135834747;RFX2..5_RFXANK_RFXAP:1.33034862454;TGIF1:1.32570674494;SPIB:1.30780362217;EN1,2:1.29857451045;HMX1:1.23000136013;FOXQ1:1.21136900652;ETS1,2:1.20832828161;TLX2:1.17376880174;ELK1,4_GABP{A,B1}:1.1212073221;NHLH1,2:1.05674178052;ATF4:1.04825428739;MYB:0.996268088753;AIRE:0.987668484787;FOX{F1,F2,J1}:0.958747553881;HIF1A:0.958462890387;BREu{core}:0.898852644092;MYOD1:0.868925250884;RORA:0.847216473155;PDX1:0.835584921581;CRX:0.826645070106;MYFfamily:0.773379288669;IRF1,2:0.68237321812;ZEB1:0.632495815521;FOXA2:0.629683803488;POU2F1..3:0.566172469098;BPTF:0.553741803833;TFAP4:0.516025158357;RXRA_VDR{dimer}:0.515533028735;SMAD1..7,9:0.512495556253;ALX1:0.509739620319;NR5A1,2:0.492358619109;FOX{D1,D2}:0.474530280154;SREBF1,2:0.464065146458;PAX3,7:0.455789306487;XBP1:0.439843520816;ESR1:0.436414478634;ESRRA:0.399455387541;EP300:0.378071075664;OCT4_SOX2{dimer}:0.352442235464;ATF6:0.338494593117;ZNF148:0.323225102364;TAL1_TCF{3,4,12}:0.320966316765;MEF2{A,B,C,D}:0.317441970159;PAX8:0.297580174103;FOXD3:0.294027647678;RBPJ:0.26767292937;IRF7:0.264043863668;GATA6:0.257112851364;PPARG:0.254111588869;FOX{I1,J2}:0.247404096628;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.241982906479;FOXO1,3,4:0.241266246074;NR6A1:0.218611414018;JUN:0.193088847805;ATF2:0.147485115797;LEF1_TCF7_TCF7L1,2:0.115944975175;MAFB:0.115193171475;SNAI1..3:0.113841119692;ZNF238:0.11186173267;CUX2:0.104791425782;HBP1_HMGB_SSRP1_UBTF:0.10198165223;BACH2:0.0973081545076;YY1:0.0954145198789;HMGA1,2:0.0952664817989;FOSL2:0.0639095619535;SOX2:0.0501435224496;POU5F1:0.0235507338428;HAND1,2:0.0189049558198;CDX1,2,4:0.00746169897165;FOS_FOS{B,L1}_JUN{B,D}:-0.018217850043;STAT1,3:-0.0307135586947;EGR1..3:-0.106261811653;AR:-0.108379213416;PRRX1,2:-0.110170586371;CEBPA,B_DDIT3:-0.116170131369;ZFP161:-0.125399107176;HNF4A_NR2F1,2:-0.147787003571;SOX{8,9,10}:-0.1501123314;NFE2:-0.15151924647;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.158963745692;HLF:-0.16010017759;CDC5L:-0.225144355278;NFATC1..3:-0.230265232724;NRF1:-0.231549254906;DBP:-0.233489682462;T:-0.233752943822;EVI1:-0.248085692704;NFY{A,B,C}:-0.256494430086;HOXA9_MEIS1:-0.266033310931;HNF1A:-0.287141151135;SOX5:-0.29029688353;HSF1,2:-0.308891925771;TFAP2{A,C}:-0.309798832;MED-1{core}:-0.316968763223;NFIX:-0.324949468307;E2F1..5:-0.334668048645;FOXP3:-0.339925678352;POU1F1:-0.351929364271;ALX4:-0.353661620351;SOX17:-0.379063925905;ZBTB6:-0.379886686347;PAX4:-0.390047205019;NKX2-2,8:-0.397625724955;bHLH_family:-0.411358121535;STAT5{A,B}:-0.414109550213;ZBTB16:-0.436179354001;NKX3-2:-0.439088964409;RFX1:-0.445556263445;NFE2L2:-0.466704333582;FOXP1:-0.474094396429;ZNF143:-0.478236960646;REST:-0.503072108745;STAT2,4,6:-0.515949621627;TFCP2:-0.51612692468;FOXL1:-0.516762854377;NKX2-3_NKX2-5:-0.553952163231;AHR_ARNT_ARNT2:-0.554214245046;PATZ1:-0.555705272393;MZF1:-0.581227095152;HES1:-0.600666911003;HOX{A4,D4}:-0.610720666718;GLI1..3:-0.628053549961;PRDM1:-0.633134102932;PAX5:-0.636321373486;GATA4:-0.638238275302;NR3C1:-0.647481934971;NKX3-1:-0.713400774831;GZF1:-0.714640283921;MTF1:-0.722280842845;PBX1:-0.732116420749;MAZ:-0.760171964046;SPZ1:-0.781276537055;HOX{A6,A7,B6,B7}:-0.786154674971;NKX2-1,4:-0.788135186749;ARID5B:-0.800987849333;HOX{A5,B5}:-0.803506868874;SP1:-0.810239477118;NR1H4:-0.811815744518;RREB1:-0.824269349493;RXR{A,B,G}:-0.827658020507;MTE{core}:-0.831153115363;TP53:-0.838794819237;TBP:-0.867218379889;SRF:-0.877325080015;GTF2A1,2:-0.889841184344;ZNF384:-0.910913527061;LHX3,4:-0.922350152463;HIC1:-0.932613297592;GCM1,2:-0.946801105353;IKZF2:-0.947412652906;TEF:-0.968065871032;MYBL2:-0.969079910674;TFAP2B:-0.977090382798;GFI1:-1.00181465941;POU3F1..4:-1.14773621119;VSX1,2:-1.19964361573;EBF1:-1.20147359058;NKX6-1,2:-1.20530876198;TBX4,5:-1.21809883655;ADNP_IRX_SIX_ZHX:-1.30418788038;NFE2L1:-1.34860658828;TFDP1:-1.36988778508;ONECUT1,2:-1.37420230539;GFI1B:-1.41517358813;TEAD1:-1.43267973393;GTF2I:-1.45859109241;POU6F1:-1.46739940265;UFEwm:-1.47718114504;TOPORS:-1.53113681252;KLF4:-1.55579258653;PITX1..3:-1.60810805939;XCPE1{core}:-1.61039480615;ZIC1..3:-1.63084051036;ZNF423:-1.6819076308;IKZF1:-1.69088130414;TLX1..3_NFIC{dimer}:-1.90133033868;PAX1,9:-2.02954694869;FOXM1:-2.37362433497 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11385-118B8;search_select_hide=table117:FF:11385-118B8 | |||
}} | }} | ||
Latest revision as of 17:56, 4 June 2020
| Name: | Dendritic Cells - plasmacytoid, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12200 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12200
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12200
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.759 |
| 10 | 10 | 0.0483 |
| 100 | 100 | 0.572 |
| 101 | 101 | 0.68 |
| 102 | 102 | 0.679 |
| 103 | 103 | 0.0697 |
| 104 | 104 | 0.459 |
| 105 | 105 | 0.501 |
| 106 | 106 | 0.062 |
| 107 | 107 | 0.4 |
| 108 | 108 | 0.116 |
| 109 | 109 | 0.141 |
| 11 | 11 | 0.369 |
| 110 | 110 | 0.907 |
| 111 | 111 | 0.55 |
| 112 | 112 | 0.881 |
| 113 | 113 | 0.596 |
| 114 | 114 | 0.384 |
| 115 | 115 | 0.494 |
| 116 | 116 | 0.308 |
| 117 | 117 | 0.0064 |
| 118 | 118 | 0.43 |
| 119 | 119 | 0.702 |
| 12 | 12 | 0.407 |
| 120 | 120 | 0.593 |
| 121 | 121 | 0.539 |
| 122 | 122 | 0.156 |
| 123 | 123 | 0.96 |
| 124 | 124 | 0.148 |
| 125 | 125 | 0.252 |
| 126 | 126 | 0.17 |
| 127 | 127 | 0.329 |
| 128 | 128 | 0.368 |
| 129 | 129 | 0.314 |
| 13 | 13 | 0.104 |
| 130 | 130 | 0.675 |
| 131 | 131 | 0.645 |
| 132 | 132 | 0.0322 |
| 133 | 133 | 0.238 |
| 134 | 134 | 0.573 |
| 135 | 135 | 0.689 |
| 136 | 136 | 0.771 |
| 137 | 137 | 0.00188 |
| 138 | 138 | 0.761 |
| 139 | 139 | 0.116 |
| 14 | 14 | 0.254 |
| 140 | 140 | 0.844 |
| 141 | 141 | 0.438 |
| 142 | 142 | 0.793 |
| 143 | 143 | 0.00939 |
| 144 | 144 | 0.5 |
| 145 | 145 | 0.539 |
| 146 | 146 | 0.478 |
| 147 | 147 | 0.134 |
| 148 | 148 | 0.121 |
| 149 | 149 | 0.357 |
| 15 | 15 | 0.1 |
| 150 | 150 | 0.532 |
| 151 | 151 | 0.446 |
| 152 | 152 | 0.787 |
| 153 | 153 | 0.435 |
| 154 | 154 | 0.955 |
| 155 | 155 | 0.0354 |
| 156 | 156 | 0.916 |
| 157 | 157 | 0.545 |
| 158 | 158 | 0.323 |
| 159 | 159 | 0.248 |
| 16 | 16 | 0.466 |
| 160 | 160 | 0.309 |
| 161 | 161 | 0.397 |
| 162 | 162 | 0.194 |
| 163 | 163 | 0.712 |
| 164 | 164 | 0.576 |
| 165 | 165 | 0.32 |
| 166 | 166 | 0.281 |
| 167 | 167 | 0.74 |
| 168 | 168 | 0.76 |
| 169 | 169 | 0.701 |
| 17 | 17 | 0.849 |
| 18 | 18 | 0.739 |
| 19 | 19 | 0.229 |
| 2 | 2 | 0.877 |
| 20 | 20 | 0.403 |
| 21 | 21 | 0.983 |
| 22 | 22 | 0.723 |
| 23 | 23 | 0.678 |
| 24 | 24 | 0.229 |
| 25 | 25 | 0.0907 |
| 26 | 26 | 0.989 |
| 27 | 27 | 0.0973 |
| 28 | 28 | 0.286 |
| 29 | 29 | 0.0275 |
| 3 | 3 | 0.323 |
| 30 | 30 | 0.448 |
| 31 | 31 | 0.786 |
| 32 | 32 | 0.0494 |
| 33 | 33 | 0.292 |
| 34 | 34 | 0.906 |
| 35 | 35 | 0.0977 |
| 36 | 36 | 0.187 |
| 37 | 37 | 0.131 |
| 38 | 38 | 0.436 |
| 39 | 39 | 0.414 |
| 4 | 4 | 0.109 |
| 40 | 40 | 0.975 |
| 41 | 41 | 0.0279 |
| 42 | 42 | 0.101 |
| 43 | 43 | 0.286 |
| 44 | 44 | 0.672 |
| 45 | 45 | 0.78 |
| 46 | 46 | 0.578 |
| 47 | 47 | 0.602 |
| 48 | 48 | 0.786 |
| 49 | 49 | 0.292 |
| 5 | 5 | 0.437 |
| 50 | 50 | 0.672 |
| 51 | 51 | 0.339 |
| 52 | 52 | 0.893 |
| 53 | 53 | 0.697 |
| 54 | 54 | 0.997 |
| 55 | 55 | 0.671 |
| 56 | 56 | 0.764 |
| 57 | 57 | 0.858 |
| 58 | 58 | 0.038 |
| 59 | 59 | 0.797 |
| 6 | 6 | 0.796 |
| 60 | 60 | 0.274 |
| 61 | 61 | 0.0772 |
| 62 | 62 | 0.0255 |
| 63 | 63 | 0.956 |
| 64 | 64 | 0.659 |
| 65 | 65 | 0.833 |
| 66 | 66 | 0.577 |
| 67 | 67 | 0.138 |
| 68 | 68 | 0.57 |
| 69 | 69 | 0.539 |
| 7 | 7 | 0.0859 |
| 70 | 70 | 0.0855 |
| 71 | 71 | 0.139 |
| 72 | 72 | 0.154 |
| 73 | 73 | 0.717 |
| 74 | 74 | 0.316 |
| 75 | 75 | 0.154 |
| 76 | 76 | 0.505 |
| 77 | 77 | 0.455 |
| 78 | 78 | 0.018 |
| 79 | 79 | 0.589 |
| 8 | 8 | 0.458 |
| 80 | 80 | 0.00836 |
| 81 | 81 | 0.534 |
| 82 | 82 | 0.277 |
| 83 | 83 | 0.218 |
| 84 | 84 | 0.367 |
| 85 | 85 | 0.543 |
| 86 | 86 | 0.0819 |
| 87 | 87 | 0.0622 |
| 88 | 88 | 0.313 |
| 89 | 89 | 0.63 |
| 9 | 9 | 0.375 |
| 90 | 90 | 0.086 |
| 91 | 91 | 0.982 |
| 92 | 92 | 0.734 |
| 93 | 93 | 0.598 |
| 94 | 94 | 0.255 |
| 95 | 95 | 0.0125 |
| 96 | 96 | 0.932 |
| 97 | 97 | 0.849 |
| 98 | 98 | 0.228 |
| 99 | 99 | 3.77779e-4 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12200
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000045 human plasmacytoid dendritic cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000784 (plasmacytoid dendritic cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000045 (human plasmacytoid dendritic cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
