FF:11388-118C2: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004845 | |DRA_sample_Accession=CAGE@SAMD00004845 | ||
|accession_numbers=CAGE;DRX008403;DRR009275;DRZ000700;DRZ002085 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004845 | ||
|accession_numbers=CAGE;DRX008403;DRR009275;DRZ000700;DRZ002085;DRZ012050;DRZ013435 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037061;DRR041427;DRZ007069 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000178,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000178,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000226,CL:0000080,CL:0000842 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000226,CL:0000080,CL:0000842 | ||
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|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.35!224.98!PLEK;;chr1:25256756..25256774,-!p1@RUNX3!2.17!268.21!RUNX3;;chr11:47400078..47400106,-!p1@SPI1!2.17!145.36!SPI1;;chr2:157189180..157189290,-!p1@NR4A2!2.05!546.23!NR4A2;;chr16:85932760..85932775,+!p1@IRF8!1.97!92.11!IRF8;;chr12:54778471..54778528,-!p1@ZNF385A!1.93!83.99!ZNF385A;;chr19:54058073..54058088,+!p1@ZNF331!1.91!80.58!ZNF331;;chr19:54041669..54041697,+!p2@ZNF331!1.89!77.38!ZNF331;;chr7:50343634..50343717,+!p2@IKZF1!1.85!69.05!IKZF1;;chr2:192015701..192015743,-!p1@STAT4!1.83!89.44!STAT4;;chr20:50159198..50159299,-!p1@NFATC2!1.79!87.84!NFATC2;;chr17:45810594..45810608,+!p1@TBX21!1.79!61.15!TBX21;;chr5:133451294..133451310,+!p2@TCF7!1.78!58.91!TCF7;;chr9:102584262..102584276,+!p1@NR4A3!1.76!123.16!NR4A3;;chr9:117150254..117150271,-!p1@AKNA!1.69!128.07!AKNA;;chr14:35873947..35873965,-!p1@NFKBIA!1.63!2494.65!NFKBIA;;chr5:133450365..133450444,+!p1@TCF7!1.63!182.82!TCF7;;chr3:63953435..63953499,+!p1@ATXN7!1.63!41.41!ATXN7;;chr6:91006518..91006570,-!p1@BACH2!1.58!82.50!BACH2;;chr11:47400062..47400077,-!p2@SPI1!1.55!34.15!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.54!33.62!SPI1;;chr6:391743..391759,+!p1@IRF4!1.54!33.62!IRF4;;chr7:50344289..50344323,+!p1@IKZF1!1.54!33.51!IKZF1;;chrY:21906594..21906622,-!p1@KDM5D!1.53!32.98!KDM5D;;chr3:39195075..39195088,-!p1@CSRNP1!1.52!195.42!CSRNP1;;chr2:231090433..231090469,+!p1@SP140!1.52!32.45!SP140;;chr8:123793988..123794016,+!p1@ZHX2!1.50!52.94!ZHX2;;chr4:109087445..109087463,-!p1@LEF1!1.49!29.88!LEF1;;chr19:45971246..45971265,+!p1@FOSB!1.48!523.71!FOSB;;chr15:60884706..60884743,-!p1@RORA!1.48!146.86!RORA;;chr9:102584241..102584261,+!p4@NR4A3!1.47!43.65!NR4A3;;chr6:106546808..106546833,+!p3@PRDM1!1.47!35.86!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.46!6111.86!JUNB;;chr2:145277640..145277771,-!p1@ZEB2!1.45!350.39!ZEB2;;chr14:75745523..75745537,+!p1@FOS!1.44!3053.90!FOS;;chr3:101546827..101546847,+!p2@NFKBIZ!1.43!36.39!NFKBIZ;;chr12:72056800..72056834,+!p1@THAP2!1.42!34.15!THAP2;;chrX:106960285..106960299,-!p1@TSC22D3!1.40!616.78!TSC22D3;;chr10:35484053..35484076,+!p1@CREM!1.39!57.21!CREM;;chr9:102584159..102584174,+!p2@NR4A3!1.39!41.62!NR4A3;;chr19:36391434..36391450,-!p1@NFKBID!1.38!44.61!NFKBID;;chr19:16435625..16435682,+!p1@KLF2!1.37!700.77!KLF2;;chr2:61108695..61108753,+!p1@REL!1.37!149.74!REL;;chr14:35872453..35872485,-!p2@NFKBIA!1.37!53.90!NFKBIA;;chr3:71355163..71355209,-!p5@FOXP1!1.37!31.16!FOXP1;;chr19:54041645..54041661,+!p5@ZNF331!1.37!22.52!ZNF331;;chr19:50922187..50922204,+!p1@SPIB!1.36!21.88!SPIB;;chr20:56195474..56195506,-!p1@ZBP1!1.36!21.88!ZBP1;;chrX:106960180..106960197,-!p2@TSC22D3!1.34!77.48!TSC22D3;;chr14:35872962..35873025,-!p3@NFKBIA!1.34!51.98!NFKBIA;;chr12:52445218..52445237,+!p1@NR4A1!1.33!246.75!NR4A1;;chr4:103422499..103422632,+!p1@NFKB1!1.32!402.15!NFKB1;;chr20:39317868..39317884,-!p1@MAFB!1.32!226.69!MAFB;;chr3:18486354..18486377,-!p2@SATB1!1.32!24.65!SATB1;;chr7:115670804..115670825,-!p1@TFEC!1.32!19.96!TFEC;;chr11:47399996..47400014,-!p4@SPI1!1.32!19.85!SPI1;;chr2:68592394..68592405,+!p2@PLEK!1.30!19.10!PLEK;;chr3:39195037..39195069,-!p2@CSRNP1!1.29!111.32!CSRNP1;;chr2:192015750..192015793,-!p2@STAT4!1.29!24.65!STAT4;;chr2:43453734..43453751,-!p1@ZFP36L2!1.27!1837.10!ZFP36L2;;chr3:101568349..101568365,+!p1@NFKBIZ!1.27!893.52!NFKBIZ;;chr5:131826457..131826514,-!p1@IRF1!1.26!657.66!IRF1;;chr6:106534192..106534224,+!p1@PRDM1!1.26!47.92!PRDM1;;chr10:8096631..8096660,+!p1@GATA3!1.24!19.96!GATA3;;chr12:54778351..54778378,-!p6@ZNF385A!1.24!16.22!ZNF385A;;chr2:70142232..70142251,+!p1@MXD1!1.23!89.22!MXD1;;chrX:106960221..106960236,-!p3@TSC22D3!1.22!42.48!TSC22D3;;chr6:91006575..91006602,-!p2@BACH2!1.22!23.27!BACH2;;chr2:61108878..61108891,+!p5@REL!1.22!15.69!REL;;chr2:157189617..157189667,-!p4@NR4A2!1.22!15.58!NR4A2;;chr19:45252008..45252024,+!p2@BCL3!1.21!50.27!BCL3;;chr7:50344251..50344288,+!p3@IKZF1!1.21!15.16!IKZF1;;chr6:12011943..12012015,+!p2@HIVEP1!1.20!47.28!HIVEP1;;chr3:5020939..5020952,+!p2@BHLHE40!1.20!46.00!BHLHE40;;chr9:102584128..102584144,+!p3@NR4A3!1.20!28.28!NR4A3;;chr8:67525443..67525459,-!p2@MYBL1!1.20!22.20!MYBL1;;chr3:71542615..71542644,-!p12@FOXP1!1.20!14.73!FOXP1;;chr10:8096772..8096787,+!p2@GATA3!1.19!17.29!GATA3;;chr2:231090471..231090504,+!p2@SP140!1.19!14.62!SP140;;chrY:2803415..2803468,+!p1@ZFY!1.19!14.62!ZFY;;chr6:106534230..106534254,+!p2@PRDM1!1.18!35.65!PRDM1;;chr8:81397820..81397836,+!p2@ZBTB10!1.18!17.72!ZBTB10;;chr6:106546834..106546850,+!p4@PRDM1!1.18!14.19!PRDM1;;chr9:102584278..102584285,+!p5@NR4A3!1.18!14.09!NR4A3;;chr3:23986824..23986848,+!p2@NR1D2!1.17!76.20!NR1D2;;chr21:36421535..36421610,-!p2@RUNX1!1.17!48.45!RUNX1;;chr14:35872926..35872951,-!p4@NFKBIA!1.17!19.42!NFKBIA;;chr2:61108808..61108821,+!p3@REL!1.17!17.29!REL;;chr13:74707894..74707947,-!p6@KLF12!1.17!15.26!KLF12;;chr11:47400032..47400043,-!p5@SPI1!1.16!13.45!SPI1;;chr4:109090075..109090095,-!p2@LEF1!1.16!13.45!LEF1;;chr2:97202480..97202499,+!p1@ARID5A!1.15!131.92!ARID5A;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| |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.35!224.98!PLEK;;chr1:25256756..25256774,-!p1@RUNX3!2.17!268.21!RUNX3;;chr11:47400078..47400106,-!p1@SPI1!2.17!145.36!SPI1;;chr2:157189180..157189290,-!p1@NR4A2!2.05!546.23!NR4A2;;chr16:85932760..85932775,+!p1@IRF8!1.97!92.11!IRF8;;chr12:54778471..54778528,-!p1@ZNF385A!1.93!83.99!ZNF385A;;chr19:54058073..54058088,+!p1@ZNF331!1.91!80.58!ZNF331;;chr19:54041669..54041697,+!p2@ZNF331!1.89!77.38!ZNF331;;chr7:50343634..50343717,+!p2@IKZF1!1.85!69.05!IKZF1;;chr2:192015701..192015743,-!p1@STAT4!1.83!89.44!STAT4;;chr20:50159198..50159299,-!p1@NFATC2!1.79!87.84!NFATC2;;chr17:45810594..45810608,+!p1@TBX21!1.79!61.15!TBX21;;chr5:133451294..133451310,+!p2@TCF7!1.78!58.91!TCF7;;chr9:102584262..102584276,+!p1@NR4A3!1.76!123.16!NR4A3;;chr9:117150254..117150271,-!p1@AKNA!1.69!128.07!AKNA;;chr14:35873947..35873965,-!p1@NFKBIA!1.63!2494.65!NFKBIA;;chr5:133450365..133450444,+!p1@TCF7!1.63!182.82!TCF7;;chr3:63953435..63953499,+!p1@ATXN7!1.63!41.41!ATXN7;;chr6:91006518..91006570,-!p1@BACH2!1.58!82.50!BACH2;;chr11:47400062..47400077,-!p2@SPI1!1.55!34.15!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.54!33.62!SPI1;;chr6:391743..391759,+!p1@IRF4!1.54!33.62!IRF4;;chr7:50344289..50344323,+!p1@IKZF1!1.54!33.51!IKZF1;;chrY:21906594..21906622,-!p1@KDM5D!1.53!32.98!KDM5D;;chr3:39195075..39195088,-!p1@CSRNP1!1.52!195.42!CSRNP1;;chr2:231090433..231090469,+!p1@SP140!1.52!32.45!SP140;;chr8:123793988..123794016,+!p1@ZHX2!1.50!52.94!ZHX2;;chr4:109087445..109087463,-!p1@LEF1!1.49!29.88!LEF1;;chr19:45971246..45971265,+!p1@FOSB!1.48!523.71!FOSB;;chr15:60884706..60884743,-!p1@RORA!1.48!146.86!RORA;;chr9:102584241..102584261,+!p4@NR4A3!1.47!43.65!NR4A3;;chr6:106546808..106546833,+!p3@PRDM1!1.47!35.86!PRDM1;;chr19:12902289..12902307,+!p1@JUNB!1.46!6111.86!JUNB;;chr2:145277640..145277771,-!p1@ZEB2!1.45!350.39!ZEB2;;chr14:75745523..75745537,+!p1@FOS!1.44!3053.90!FOS;;chr3:101546827..101546847,+!p2@NFKBIZ!1.43!36.39!NFKBIZ;;chr12:72056800..72056834,+!p1@THAP2!1.42!34.15!THAP2;;chrX:106960285..106960299,-!p1@TSC22D3!1.40!616.78!TSC22D3;;chr10:35484053..35484076,+!p1@CREM!1.39!57.21!CREM;;chr9:102584159..102584174,+!p2@NR4A3!1.39!41.62!NR4A3;;chr19:36391434..36391450,-!p1@NFKBID!1.38!44.61!NFKBID;;chr19:16435625..16435682,+!p1@KLF2!1.37!700.77!KLF2;;chr2:61108695..61108753,+!p1@REL!1.37!149.74!REL;;chr14:35872453..35872485,-!p2@NFKBIA!1.37!53.90!NFKBIA;;chr3:71355163..71355209,-!p5@FOXP1!1.37!31.16!FOXP1;;chr19:54041645..54041661,+!p5@ZNF331!1.37!22.52!ZNF331;;chr19:50922187..50922204,+!p1@SPIB!1.36!21.88!SPIB;;chr20:56195474..56195506,-!p1@ZBP1!1.36!21.88!ZBP1;;chrX:106960180..106960197,-!p2@TSC22D3!1.34!77.48!TSC22D3;;chr14:35872962..35873025,-!p3@NFKBIA!1.34!51.98!NFKBIA;;chr12:52445218..52445237,+!p1@NR4A1!1.33!246.75!NR4A1;;chr4:103422499..103422632,+!p1@NFKB1!1.32!402.15!NFKB1;;chr20:39317868..39317884,-!p1@MAFB!1.32!226.69!MAFB;;chr3:18486354..18486377,-!p2@SATB1!1.32!24.65!SATB1;;chr7:115670804..115670825,-!p1@TFEC!1.32!19.96!TFEC;;chr11:47399996..47400014,-!p4@SPI1!1.32!19.85!SPI1;;chr2:68592394..68592405,+!p2@PLEK!1.30!19.10!PLEK;;chr3:39195037..39195069,-!p2@CSRNP1!1.29!111.32!CSRNP1;;chr2:192015750..192015793,-!p2@STAT4!1.29!24.65!STAT4;;chr2:43453734..43453751,-!p1@ZFP36L2!1.27!1837.10!ZFP36L2;;chr3:101568349..101568365,+!p1@NFKBIZ!1.27!893.52!NFKBIZ;;chr5:131826457..131826514,-!p1@IRF1!1.26!657.66!IRF1;;chr6:106534192..106534224,+!p1@PRDM1!1.26!47.92!PRDM1;;chr10:8096631..8096660,+!p1@GATA3!1.24!19.96!GATA3;;chr12:54778351..54778378,-!p6@ZNF385A!1.24!16.22!ZNF385A;;chr2:70142232..70142251,+!p1@MXD1!1.23!89.22!MXD1;;chrX:106960221..106960236,-!p3@TSC22D3!1.22!42.48!TSC22D3;;chr6:91006575..91006602,-!p2@BACH2!1.22!23.27!BACH2;;chr2:61108878..61108891,+!p5@REL!1.22!15.69!REL;;chr2:157189617..157189667,-!p4@NR4A2!1.22!15.58!NR4A2;;chr19:45252008..45252024,+!p2@BCL3!1.21!50.27!BCL3;;chr7:50344251..50344288,+!p3@IKZF1!1.21!15.16!IKZF1;;chr6:12011943..12012015,+!p2@HIVEP1!1.20!47.28!HIVEP1;;chr3:5020939..5020952,+!p2@BHLHE40!1.20!46.00!BHLHE40;;chr9:102584128..102584144,+!p3@NR4A3!1.20!28.28!NR4A3;;chr8:67525443..67525459,-!p2@MYBL1!1.20!22.20!MYBL1;;chr3:71542615..71542644,-!p12@FOXP1!1.20!14.73!FOXP1;;chr10:8096772..8096787,+!p2@GATA3!1.19!17.29!GATA3;;chr2:231090471..231090504,+!p2@SP140!1.19!14.62!SP140;;chrY:2803415..2803468,+!p1@ZFY!1.19!14.62!ZFY;;chr6:106534230..106534254,+!p2@PRDM1!1.18!35.65!PRDM1;;chr8:81397820..81397836,+!p2@ZBTB10!1.18!17.72!ZBTB10;;chr6:106546834..106546850,+!p4@PRDM1!1.18!14.19!PRDM1;;chr9:102584278..102584285,+!p5@NR4A3!1.18!14.09!NR4A3;;chr3:23986824..23986848,+!p2@NR1D2!1.17!76.20!NR1D2;;chr21:36421535..36421610,-!p2@RUNX1!1.17!48.45!RUNX1;;chr14:35872926..35872951,-!p4@NFKBIA!1.17!19.42!NFKBIA;;chr2:61108808..61108821,+!p3@REL!1.17!17.29!REL;;chr13:74707894..74707947,-!p6@KLF12!1.17!15.26!KLF12;;chr11:47400032..47400043,-!p5@SPI1!1.16!13.45!SPI1;;chr4:109090075..109090095,-!p2@LEF1!1.16!13.45!LEF1;;chr2:97202480..97202499,+!p1@ARID5A!1.15!131.92!ARID5A;;chr7:104654690..104654704,+!p2@MLL5!1.14!25.19!MLL5;;chr7:104654718..104654741,+!p3@MLL5!1.13!18.14!MLL5;;chr11:111249993..111250006,-!p1@POU2AF1!1.13!12.59!POU2AF1;;chr17:37934365..37934387,-!p2@IKZF3!1.13!12.49!IKZF3;;chr2:145271342..145271377,-!p5@ZEB2!1.13!12.38!ZEB2;;chr7:128577972..128578047,+!p1@IRF5!1.12!19.32!IRF5;;chr6:144385698..144385742,-!p2@PLAGL1!1.12!14.73!PLAGL1;;chr17:38020392..38020477,-!p1@IKZF3!1.12!12.17!IKZF3;;chr4:38665769..38665801,+!p2@KLF3!1.11!108.33!KLF3;;chr14:75746722..75746777,+!p2@FOS!1.11!15.37!FOS;;chr18:46475696..46475713,-!p1@SMAD7!1.10!13.13!SMAD7;;chr1:25291475..25291511,-!p2@RUNX3!1.10!11.63!RUNX3;;chr5:133451347..133451358,+!p3@TCF7!1.09!11.42!TCF7;;chr3:27763807..27763822,-!p1@EOMES!1.09!11.31!EOMES;;chr11:47400045..47400060,-!p6@SPI1!1.09!11.21!SPI1;;chr11:128563948..128564003,+!p1@FLI1!1.08!132.24!FLI1;;chr10:51572408..51572454,+!p3@NCOA4!1.08!65.32!NCOA4;;chr21:36421347..36421380,-!p8@RUNX1!1.08!10.99!RUNX1;;chr12:72056773..72056796,+!p3@THAP2!1.07!14.19!THAP2;;chr1:26697243..26697258,-!p1@ZNF683!1.07!10.78!ZNF683;;chr6:106546786..106546802,+!p6@PRDM1!1.06!10.46!PRDM1;;chr6:44233252..44233296,-!p1@NFKBIE!1.05!102.25!NFKBIE;;chr19:42636586..42636607,-!p1@POU2F2!1.05!28.60!POU2F2;;chr17:38497662..38497713,+!p4@RARA!1.05!11.95!RARA;;chr3:71542684..71542720,-!p18@FOXP1!1.05!10.14!FOXP1;;chr14:64971461..64971542,+!p1@ZBTB1!1.04!203.21!ZBTB1;;chr1:156470515..156470542,-!p2@MEF2D!1.04!52.94!MEF2D;;chr19:45250948..45250998,+!p3@BCL3!1.04!25.40!BCL3;;chr5:142782823..142782854,-!p3@NR3C1!1.04!14.19!NR3C1;;chr3:39195139..39195150,-!p3@CSRNP1!1.04!12.81!CSRNP1;;chr16:31885093..31885165,+!p1@ZNF267!1.03!149.63!ZNF267;;chr1:157108130..157108173,-!p1@ETV3!1.03!70.65!ETV3;;chr19:54041574..54041589,+!p6@ZNF331!1.03!9.71!ZNF331;;chr10:104154246..104154347,+!p3@NFKB2!1.02!58.70!NFKB2;;chr2:145275162..145275202,-!p2@ZEB2!1.02!56.57!ZEB2;;chr2:208394817..208394834,+!p3@CREB1!1.02!38.74!CREB1;;chr18:77155922..77155939,+!p1@NFATC1!1.02!26.47!NFATC1;;chr12:54694758..54694805,-!p1@NFE2!1.02!11.53!NFE2;;chr7:149470641..149470694,-!p1@ZNF467!1.01!42.48!ZNF467;;chr19:33793430..33793447,-!p1@CEBPA!1.01!39.81!CEBPA;;chr4:57522166..57522260,-!p2@HOPX!1.01!10.78!HOPX;;chr2:192015677..192015691,-!p3@STAT4!1.01!9.18!STAT4;;chr17:38020516..38020544,-!p5@IKZF3!1.01!9.18!IKZF3;;chr15:31619326..31619390,+!p2@KLF13!1.00!105.23!KLF13;;chr11:128392273..128392308,-!p2@ETS1!1.00!39.06!ETS1;;chr14:64971288..64971316,-!p2@ZBTB25!1.00!28.39!ZBTB25;;chr14:64970670..64970712,-!p3@ZBTB25!1.00!19.96!ZBTB25;;chr8:81397846..81397860,+!p3@ZBTB10!1.00!11.42!ZBTB10;;chr8:81397876..81397898,+!p5@ZBTB10!1.00!10.57!ZBTB10;;chr1:25256439..25256476,-!p3@RUNX3!1.00!8.97!RUNX3;;chr3:128212033..128212051,-!p1@GATA2!1.00!8.97!GATA2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.99!109.72!ZC3H12A;;chr9:73028332..73028385,-!p3@KLF9!0.99!30.95!KLF9;;chr14:64971438..64971450,+!p2@ZBTB1!0.99!20.92!ZBTB1;;chr7:50343895..50343936,+!p5@IKZF1!0.99!8.86!IKZF1;;chr9:110252035..110252057,-!p1@KLF4!0.98!140.24!KLF4;;chr19:12721790..12721810,+!p2@ZNF791!0.98!24.33!ZNF791;;chr9:110250697..110250738,-!p2@KLF4!0.98!10.14!KLF4;;chr10:104154415..104154434,+!p5@NFKB2!0.98!8.54!NFKB2;;chr3:5021113..5021180,+!p1@BHLHE40!0.96!583.16!BHLHE40;;chr4:106068026..106068084,+!p1@TET2!0.96!76.31!TET2;;chr5:172483347..172483407,+!p1@C5orf41!0.96!62.54!CREBRF;;chr7:17338324..17338341,+!p3@AHR!0.96!27.96!AHR;;chrX:106960249..106960260,-!p5@TSC22D3!0.96!13.13!TSC22D3;;chr16:89789271..89789291,+!p5@ZNF276!0.95!7.90!ZNF276;;chr14:35872542..35872553,-!p10@NFKBIA!0.95!7.90!NFKBIA;;chr11:128392085..128392232,-!p1@ETS1!0.94!271.19!ETS1;;chr6:143266297..143266356,-!p1@HIVEP2!0.94!38.96!HIVEP2;;chr19:19729477..19729542,-!p1@PBX4!0.94!17.08!PBX4;;chr2:100759010..100759035,-!p1@AFF3!0.94!7.68!AFF3;;chr10:3827371..3827386,-!p2@KLF6!0.93!65.85!KLF6;;chrX:101186981..101187030,-!p1@ZMAT1!0.93!25.19!ZMAT1;;chr10:35416142..35416169,+!p3@CREM!0.93!20.28!CREM;;chr10:35484090..35484104,+!p6@CREM!0.93!7.47!CREM;;chrX:153305787..153305807,-!p3@MECP2!0.93!7.47!MECP2;;chr2:174828545..174828644,-!p1@SP3!0.92!117.29!SP3;;chr8:60031619..60031676,-!p1@TOX!0.92!16.33!TOX;;chr2:61108771..61108789,+!p4@REL!0.92!11.21!REL;;chr4:83822199..83822239,+!p2@THAP9!0.92!8.75!THAP9;;chr14:35872414..35872425,-!p7@NFKBIA!0.92!8.22!NFKBIA;;chr3:18487057..18487105,-!p4@SATB1!0.92!7.36!SATB1;;chr14:90085458..90085557,-!p1@FOXN3!0.91!78.76!FOXN3;;chr17:40440481..40440550,+!p1@STAT5A!0.91!53.15!STAT5A;;chr1:25256175..25256228,-!p5@RUNX3!0.91!7.04!RUNX3;;chr6:106546731..106546755,+!p5@PRDM1!0.91!7.04!PRDM1;;chr19:16435423..16435484,+!p5@KLF2!0.90!6.94!KLF2;;chr4:57522598..57522664,-!p3@HOPX!0.90!6.94!HOPX;;chr15:60884747..60884774,-!p3@RORA!0.89!17.18!RORA;;chr3:150126904..150126958,+!p7@TSC22D2!0.89!12.06!TSC22D2;;chr14:35872494..35872511,-!p5@NFKBIA!0.89!9.07!NFKBIA;;chr14:69262947..69262986,-!p3@ZFP36L1!0.89!8.32!ZFP36L1;;chr17:38020557..38020572,-!p4@IKZF3!0.89!6.83!IKZF3;;chr2:28615716..28615733,+!p1@FOSL2!0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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000842;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390 | |||
|ffid_belonging_in_development=CL:0000134 | |ffid_belonging_in_development=CL:0000134 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 41: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11388-118C2 | |id=FF:11388-118C2 | ||
|is_a=EFO:0002091;;FF:0000135 | |is_a=EFO:0002091;;FF:0000135 | ||
Line 46: | Line 54: | ||
|library_id=CNhs12002 | |library_id=CNhs12002 | ||
|library_id_phase_based=2:CNhs12002 | |library_id_phase_based=2:CNhs12002 | ||
|name= | |microRNAs= | ||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11388 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10005.ACTTGA.11388 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11388 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10005.ACTTGA.11388 | |||
|name=Peripheral Blood Mononuclear Cells, donor3 | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage= | |profile_hcage=CNhs12002,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq=SRhi10005,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 67: | Line 82: | ||
|rna_tube_id=118C2 | |rna_tube_id=118C2 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10005.ACTTGA | |||
|sample_age=46 | |sample_age=46 | ||
|sample_category=primary cells | |sample_category=primary cells | ||
Line 90: | Line 106: | ||
|top_motifs=PAX3,7:3.00618570612;ETS1,2:2.83160872023;NFKB1_REL_RELA:2.80055860987;RUNX1..3:2.73121596299;SPI1:2.63976606098;SPIB:2.43342029018;PAX2:2.42596737591;ATF5_CREB3:2.34055939932;ATF4:2.23236494904;CREB1:2.15301038268;ELF1,2,4:1.96887715035;NFIL3:1.93893733008;FOS_FOS{B,L1}_JUN{B,D}:1.81147710931;BACH2:1.70619271693;RXRA_VDR{dimer}:1.70259733751;NANOG{mouse}:1.66221224243;NFATC1..3:1.6517417755;IRF1,2:1.64784583694;CEBPA,B_DDIT3:1.63692845273;MAFB:1.63458823966;HIF1A:1.62569468886;DMAP1_NCOR{1,2}_SMARC:1.59498747829;TGIF1:1.56754446028;FOSL2:1.53896413857;NFE2:1.52358226252;HLF:1.4798992947;JUN:1.41818156055;HMX1:1.40357229981;FOXN1:1.38313315983;FOX{D1,D2}:1.32416163891;T:1.28893187279;FOXO1,3,4:1.18085509366;TLX2:1.17055002923;FOXP3:1.06944152451;BREu{core}:0.97839517259;IRF7:0.953565958123;RORA:0.929059562358;EP300:0.92199758083;EGR1..3:0.80431888194;RFX2..5_RFXANK_RFXAP:0.729258518129;ATF6:0.698081389673;SREBF1,2:0.694272187959;PITX1..3:0.67613037312;BPTF:0.674626800115;NFE2L1:0.671286644759;ATF2:0.662315796579;STAT2,4,6:0.648873726716;IKZF2:0.641999374448;RBPJ:0.36947569922;PAX6:0.3323084541;SMAD1..7,9:0.318918413746;HMGA1,2:0.302278691486;FOX{F1,F2,J1}:0.283813096494;POU2F1..3:0.274685893838;NFE2L2:0.194955904162;NKX2-1,4:0.190067054353;MYFfamily:0.15294435014;SPZ1:0.122104218864;ESR1:0.0664846262652;ZBTB16:0.0112192750968;STAT1,3:0.0106563850168;FOXP1:0.00833502897151;GLI1..3:-0.0128632090486;TBX4,5:-0.0197794971486;MYB:-0.0556764119817;GATA4:-0.0965569434427;PAX8:-0.151425278354;GATA6:-0.180874237687;GCM1,2:-0.189946724384;TFAP4:-0.206372371004;SOX2:-0.215221628084;TOPORS:-0.220783517065;HSF1,2:-0.239923669553;PPARG:-0.252008863433;CDX1,2,4:-0.258621836122;PDX1:-0.26250475337;MTE{core}:-0.281531078078;POU5F1:-0.292134897475;TFCP2:-0.297637993838;ALX4:-0.312323729661;AHR_ARNT_ARNT2:-0.318821793273;PATZ1:-0.339318700086;ZEB1:-0.355102608419;XBP1:-0.37077592685;FOXM1:-0.386660761757;NANOG:-0.396463300576;MZF1:-0.398981751004;HES1:-0.416698536177;MYOD1:-0.425773964595;OCT4_SOX2{dimer}:-0.434311681523;NHLH1,2:-0.444389986374;RREB1:-0.44529927158;TFAP2B:-0.457283379197;MEF2{A,B,C,D}:-0.480854281077;TFDP1:-0.511957478123;MED-1{core}:-0.517865405336;TFAP2{A,C}:-0.528706617518;HNF4A_NR2F1,2:-0.536351502863;ZFP161:-0.547395851396;STAT5{A,B}:-0.563144041473;PAX5:-0.589212311307;NR1H4:-0.594540623394;MTF1:-0.596614783122;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.600510176565;FOXD3:-0.611546232966;SP1:-0.642238521498;HBP1_HMGB_SSRP1_UBTF:-0.650830997838;RXR{A,B,G}:-0.65623744016;HIC1:-0.694065856414;SRF:-0.699016366671;ZNF148:-0.701315399199;SNAI1..3:-0.708026832402;PAX4:-0.709600289554;HOXA9_MEIS1:-0.712718747311;AIRE:-0.713217769336;TAL1_TCF{3,4,12}:-0.713710184034;ZNF384:-0.716131620396;E2F1..5:-0.731296733495;NR5A1,2:-0.737698656501;EN1,2:-0.770507240786;FOXA2:-0.78769090005;FOXL1:-0.795977819437;REST:-0.805823338026;LEF1_TCF7_TCF7L1,2:-0.822069992141;NKX3-1:-0.836052628408;ZNF423:-0.879711998724;PRRX1,2:-0.893665167484;XCPE1{core}:-0.898820670776;CUX2:-0.903466747959;HNF1A:-0.908337611366;PRDM1:-0.913633902268;MAZ:-0.965886445104;CRX:-0.990533167169;NKX6-1,2:-0.998428608123;ESRRA:-1.0242659669;ZNF238:-1.04577366178;IKZF1:-1.05491576758;LMO2:-1.0690125674;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.06950003624;HOX{A5,B5}:-1.08592553497;FOXQ1:-1.08877104747;NFY{A,B,C}:-1.09328133579;ELK1,4_GABP{A,B1}:-1.1057410402;VSX1,2:-1.12939938738;SOX5:-1.15960972069;EBF1:-1.19933099326;bHLH_family:-1.20411793646;TBP:-1.21587135418;DBP:-1.22444640524;SOX{8,9,10}:-1.2358527416;NR6A1:-1.26924042405;NRF1:-1.2719835334;RFX1:-1.27915441604;GZF1:-1.31503903606;ZBTB6:-1.3308857103;AR:-1.3706026287;EVI1:-1.40792724549;GTF2I:-1.42597326168;ZIC1..3:-1.48074616721;ADNP_IRX_SIX_ZHX:-1.54166049411;ALX1:-1.60639174452;TLX1..3_NFIC{dimer}:-1.61855078012;GTF2A1,2:-1.62267483073;FOX{I1,J2}:-1.63879074714;NFIX:-1.64298354138;PBX1:-1.66396114964;HOX{A6,A7,B6,B7}:-1.67571376752;ZNF143:-1.67915022011;CDC5L:-1.69304696795;TP53:-1.71995741556;POU6F1:-1.72926972283;NR3C1:-1.74246764834;TEAD1:-1.75541968115;YY1:-1.76834391871;POU3F1..4:-1.80801250495;NKX2-3_NKX2-5:-1.81680469376;UFEwm:-1.87863740851;MYBL2:-1.91757145394;GFI1B:-1.93238198469;NKX2-2,8:-1.96225449219;LHX3,4:-1.96861370164;TEF:-2.02646818626;HAND1,2:-2.0713221971;KLF4:-2.11035762823;SOX17:-2.11106245363;ARID5B:-2.16219560069;NKX3-2:-2.17083933528;GFI1:-2.1818639458;PAX1,9:-2.23088776998;POU1F1:-2.24406424223;ONECUT1,2:-2.3184344461;HOX{A4,D4}:-2.56906730897 | |top_motifs=PAX3,7:3.00618570612;ETS1,2:2.83160872023;NFKB1_REL_RELA:2.80055860987;RUNX1..3:2.73121596299;SPI1:2.63976606098;SPIB:2.43342029018;PAX2:2.42596737591;ATF5_CREB3:2.34055939932;ATF4:2.23236494904;CREB1:2.15301038268;ELF1,2,4:1.96887715035;NFIL3:1.93893733008;FOS_FOS{B,L1}_JUN{B,D}:1.81147710931;BACH2:1.70619271693;RXRA_VDR{dimer}:1.70259733751;NANOG{mouse}:1.66221224243;NFATC1..3:1.6517417755;IRF1,2:1.64784583694;CEBPA,B_DDIT3:1.63692845273;MAFB:1.63458823966;HIF1A:1.62569468886;DMAP1_NCOR{1,2}_SMARC:1.59498747829;TGIF1:1.56754446028;FOSL2:1.53896413857;NFE2:1.52358226252;HLF:1.4798992947;JUN:1.41818156055;HMX1:1.40357229981;FOXN1:1.38313315983;FOX{D1,D2}:1.32416163891;T:1.28893187279;FOXO1,3,4:1.18085509366;TLX2:1.17055002923;FOXP3:1.06944152451;BREu{core}:0.97839517259;IRF7:0.953565958123;RORA:0.929059562358;EP300:0.92199758083;EGR1..3:0.80431888194;RFX2..5_RFXANK_RFXAP:0.729258518129;ATF6:0.698081389673;SREBF1,2:0.694272187959;PITX1..3:0.67613037312;BPTF:0.674626800115;NFE2L1:0.671286644759;ATF2:0.662315796579;STAT2,4,6:0.648873726716;IKZF2:0.641999374448;RBPJ:0.36947569922;PAX6:0.3323084541;SMAD1..7,9:0.318918413746;HMGA1,2:0.302278691486;FOX{F1,F2,J1}:0.283813096494;POU2F1..3:0.274685893838;NFE2L2:0.194955904162;NKX2-1,4:0.190067054353;MYFfamily:0.15294435014;SPZ1:0.122104218864;ESR1:0.0664846262652;ZBTB16:0.0112192750968;STAT1,3:0.0106563850168;FOXP1:0.00833502897151;GLI1..3:-0.0128632090486;TBX4,5:-0.0197794971486;MYB:-0.0556764119817;GATA4:-0.0965569434427;PAX8:-0.151425278354;GATA6:-0.180874237687;GCM1,2:-0.189946724384;TFAP4:-0.206372371004;SOX2:-0.215221628084;TOPORS:-0.220783517065;HSF1,2:-0.239923669553;PPARG:-0.252008863433;CDX1,2,4:-0.258621836122;PDX1:-0.26250475337;MTE{core}:-0.281531078078;POU5F1:-0.292134897475;TFCP2:-0.297637993838;ALX4:-0.312323729661;AHR_ARNT_ARNT2:-0.318821793273;PATZ1:-0.339318700086;ZEB1:-0.355102608419;XBP1:-0.37077592685;FOXM1:-0.386660761757;NANOG:-0.396463300576;MZF1:-0.398981751004;HES1:-0.416698536177;MYOD1:-0.425773964595;OCT4_SOX2{dimer}:-0.434311681523;NHLH1,2:-0.444389986374;RREB1:-0.44529927158;TFAP2B:-0.457283379197;MEF2{A,B,C,D}:-0.480854281077;TFDP1:-0.511957478123;MED-1{core}:-0.517865405336;TFAP2{A,C}:-0.528706617518;HNF4A_NR2F1,2:-0.536351502863;ZFP161:-0.547395851396;STAT5{A,B}:-0.563144041473;PAX5:-0.589212311307;NR1H4:-0.594540623394;MTF1:-0.596614783122;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.600510176565;FOXD3:-0.611546232966;SP1:-0.642238521498;HBP1_HMGB_SSRP1_UBTF:-0.650830997838;RXR{A,B,G}:-0.65623744016;HIC1:-0.694065856414;SRF:-0.699016366671;ZNF148:-0.701315399199;SNAI1..3:-0.708026832402;PAX4:-0.709600289554;HOXA9_MEIS1:-0.712718747311;AIRE:-0.713217769336;TAL1_TCF{3,4,12}:-0.713710184034;ZNF384:-0.716131620396;E2F1..5:-0.731296733495;NR5A1,2:-0.737698656501;EN1,2:-0.770507240786;FOXA2:-0.78769090005;FOXL1:-0.795977819437;REST:-0.805823338026;LEF1_TCF7_TCF7L1,2:-0.822069992141;NKX3-1:-0.836052628408;ZNF423:-0.879711998724;PRRX1,2:-0.893665167484;XCPE1{core}:-0.898820670776;CUX2:-0.903466747959;HNF1A:-0.908337611366;PRDM1:-0.913633902268;MAZ:-0.965886445104;CRX:-0.990533167169;NKX6-1,2:-0.998428608123;ESRRA:-1.0242659669;ZNF238:-1.04577366178;IKZF1:-1.05491576758;LMO2:-1.0690125674;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.06950003624;HOX{A5,B5}:-1.08592553497;FOXQ1:-1.08877104747;NFY{A,B,C}:-1.09328133579;ELK1,4_GABP{A,B1}:-1.1057410402;VSX1,2:-1.12939938738;SOX5:-1.15960972069;EBF1:-1.19933099326;bHLH_family:-1.20411793646;TBP:-1.21587135418;DBP:-1.22444640524;SOX{8,9,10}:-1.2358527416;NR6A1:-1.26924042405;NRF1:-1.2719835334;RFX1:-1.27915441604;GZF1:-1.31503903606;ZBTB6:-1.3308857103;AR:-1.3706026287;EVI1:-1.40792724549;GTF2I:-1.42597326168;ZIC1..3:-1.48074616721;ADNP_IRX_SIX_ZHX:-1.54166049411;ALX1:-1.60639174452;TLX1..3_NFIC{dimer}:-1.61855078012;GTF2A1,2:-1.62267483073;FOX{I1,J2}:-1.63879074714;NFIX:-1.64298354138;PBX1:-1.66396114964;HOX{A6,A7,B6,B7}:-1.67571376752;ZNF143:-1.67915022011;CDC5L:-1.69304696795;TP53:-1.71995741556;POU6F1:-1.72926972283;NR3C1:-1.74246764834;TEAD1:-1.75541968115;YY1:-1.76834391871;POU3F1..4:-1.80801250495;NKX2-3_NKX2-5:-1.81680469376;UFEwm:-1.87863740851;MYBL2:-1.91757145394;GFI1B:-1.93238198469;NKX2-2,8:-1.96225449219;LHX3,4:-1.96861370164;TEF:-2.02646818626;HAND1,2:-2.0713221971;KLF4:-2.11035762823;SOX17:-2.11106245363;ARID5B:-2.16219560069;NKX3-2:-2.17083933528;GFI1:-2.1818639458;PAX1,9:-2.23088776998;POU1F1:-2.24406424223;ONECUT1,2:-2.3184344461;HOX{A4,D4}:-2.56906730897 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11388-118C2;search_select_hide=table117:FF:11388-118C2 | |||
}} | }} |
Latest revision as of 17:57, 4 June 2020
Name: | Peripheral Blood Mononuclear Cells, donor3 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12002 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12002
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12002
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.471 |
10 | 10 | 0.0141 |
100 | 100 | 0.545 |
101 | 101 | 0.796 |
102 | 102 | 0.784 |
103 | 103 | 0.66 |
104 | 104 | 0.503 |
105 | 105 | 0.0937 |
106 | 106 | 5.49434e-4 |
107 | 107 | 0.959 |
108 | 108 | 0.649 |
109 | 109 | 0.26 |
11 | 11 | 0.324 |
110 | 110 | 0.913 |
111 | 111 | 0.12 |
112 | 112 | 0.508 |
113 | 113 | 0.0883 |
114 | 114 | 0.208 |
115 | 115 | 0.307 |
116 | 116 | 0.659 |
117 | 117 | 0.0171 |
118 | 118 | 0.268 |
119 | 119 | 0.624 |
12 | 12 | 0.242 |
120 | 120 | 0.749 |
121 | 121 | 0.374 |
122 | 122 | 0.281 |
123 | 123 | 0.00893 |
124 | 124 | 0.548 |
125 | 125 | 0.531 |
126 | 126 | 0.206 |
127 | 127 | 0.526 |
128 | 128 | 0.0741 |
129 | 129 | 0.886 |
13 | 13 | 0.492 |
130 | 130 | 0.338 |
131 | 131 | 0.679 |
132 | 132 | 0.103 |
133 | 133 | 0.599 |
134 | 134 | 0.809 |
135 | 135 | 0.548 |
136 | 136 | 0.945 |
137 | 137 | 0.00499 |
138 | 138 | 0.211 |
139 | 139 | 0.0359 |
14 | 14 | 0.326 |
140 | 140 | 0.3 |
141 | 141 | 0.615 |
142 | 142 | 0.359 |
143 | 143 | 0.00192 |
144 | 144 | 0.596 |
145 | 145 | 0.664 |
146 | 146 | 0.72 |
147 | 147 | 0.16 |
148 | 148 | 0.066 |
149 | 149 | 0.716 |
15 | 15 | 0.173 |
150 | 150 | 0.686 |
151 | 151 | 0.141 |
152 | 152 | 0.255 |
153 | 153 | 0.665 |
154 | 154 | 0.352 |
155 | 155 | 0.201 |
156 | 156 | 0.77 |
157 | 157 | 0.952 |
158 | 158 | 0.0308 |
159 | 159 | 0.164 |
16 | 16 | 0.982 |
160 | 160 | 0.796 |
161 | 161 | 0.499 |
162 | 162 | 0.0537 |
163 | 163 | 0.346 |
164 | 164 | 0.0632 |
165 | 165 | 0.372 |
166 | 166 | 0.547 |
167 | 167 | 0.319 |
168 | 168 | 0.0126 |
169 | 169 | 0.376 |
17 | 17 | 0.442 |
18 | 18 | 0.349 |
19 | 19 | 0.528 |
2 | 2 | 0.853 |
20 | 20 | 0.465 |
21 | 21 | 0.81 |
22 | 22 | 0.513 |
23 | 23 | 0.129 |
24 | 24 | 0.689 |
25 | 25 | 0.199 |
26 | 26 | 0.382 |
27 | 27 | 0.841 |
28 | 28 | 0.367 |
29 | 29 | 0.123 |
3 | 3 | 0.319 |
30 | 30 | 0.309 |
31 | 31 | 0.931 |
32 | 32 | 0.0195 |
33 | 33 | 0.511 |
34 | 34 | 0.697 |
35 | 35 | 0.0997 |
36 | 36 | 0.26 |
37 | 37 | 0.18 |
38 | 38 | 0.593 |
39 | 39 | 0.941 |
4 | 4 | 0.996 |
40 | 40 | 0.653 |
41 | 41 | 0.00988 |
42 | 42 | 0.372 |
43 | 43 | 0.0493 |
44 | 44 | 0.557 |
45 | 45 | 0.926 |
46 | 46 | 0.411 |
47 | 47 | 0.825 |
48 | 48 | 0.718 |
49 | 49 | 0.14 |
5 | 5 | 0.329 |
50 | 50 | 0.769 |
51 | 51 | 0.478 |
52 | 52 | 0.546 |
53 | 53 | 0.175 |
54 | 54 | 0.592 |
55 | 55 | 0.924 |
56 | 56 | 0.831 |
57 | 57 | 0.892 |
58 | 58 | 0.103 |
59 | 59 | 0.339 |
6 | 6 | 0.92 |
60 | 60 | 0.0903 |
61 | 61 | 0.183 |
62 | 62 | 0.0818 |
63 | 63 | 0.889 |
64 | 64 | 0.464 |
65 | 65 | 0.351 |
66 | 66 | 0.0404 |
67 | 67 | 0.454 |
68 | 68 | 0.208 |
69 | 69 | 0.428 |
7 | 7 | 0.343 |
70 | 70 | 0.13 |
71 | 71 | 0.0908 |
72 | 72 | 0.184 |
73 | 73 | 0.219 |
74 | 74 | 0.225 |
75 | 75 | 0.109 |
76 | 76 | 0.123 |
77 | 77 | 0.805 |
78 | 78 | 0.255 |
79 | 79 | 0.912 |
8 | 8 | 0.752 |
80 | 80 | 0.023 |
81 | 81 | 0.44 |
82 | 82 | 0.175 |
83 | 83 | 0.678 |
84 | 84 | 0.0435 |
85 | 85 | 0.0964 |
86 | 86 | 0.0158 |
87 | 87 | 0.398 |
88 | 88 | 0.712 |
89 | 89 | 0.597 |
9 | 9 | 0.318 |
90 | 90 | 0.203 |
91 | 91 | 0.484 |
92 | 92 | 0.338 |
93 | 93 | 0.753 |
94 | 94 | 0.138 |
95 | 95 | 0.14 |
96 | 96 | 0.712 |
97 | 97 | 0.966 |
98 | 98 | 0.168 |
99 | 99 | 9.43601e-4 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12002
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000135 human peripheral blood mononuclear cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000226 (single nucleate cell)
0000080 (circulating cell)
0000842 (mononuclear cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000178 (blood)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000135 (human peripheral blood mononuclear cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)