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{{f5samples
{{f5samples
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|DRA_sample_Accession=CAGE@SAMD00004845
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000224,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000842,CL:0000988,CL:0002087,CL:0002320,CL:0002371
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004845
|accession_numbers=CAGE;DRX008403;DRR009275;DRZ000700;DRZ002085;DRZ012050;DRZ013435
|accession_numbers_RNASeq=sRNA-Seq;DRX037061;DRR041427;DRZ007069
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|comment=
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|data_phase=2
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|def=
|def=
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|fonse_cell_line_closure=
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|fonse_treatment_closure=
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|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor3.CNhs12002.11388-118C2.hg38.nobarcode.ctss.bed.gz
|id=FF:11388-118C2
|id=FF:11388-118C2
|is_a=EFO:0002091;;FF:0000002;;FF:0000135;;FF:0000210
|is_a=EFO:0002091;;FF:0000135
|is_obsolete=
|library_id=CNhs12002
|library_id_phase_based=2:CNhs12002
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11388
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10005.ACTTGA.11388
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11388
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10005.ACTTGA.11388
|name=Peripheral Blood Mononuclear Cells, donor3
|name=Peripheral Blood Mononuclear Cells, donor3
|namespace=FANTOM5
|namespace=FANTOM5
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|profile_cagescan=,,,
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|profile_hcage=CNhs12002,LSID837,release011,COMPLETED
|profile_hcage=CNhs12002,LSID837,release011,COMPLETED
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=118
|rna_box=118
|rna_catalog_number=3H100-10-10
|rna_catalog_number=3H100-10-10
Line 56: Line 82:
|rna_tube_id=118C2
|rna_tube_id=118C2
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10005.ACTTGA
|sample_age=46
|sample_age=46
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 69: Line 97:
|sample_ethnicity=C
|sample_ethnicity=C
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.65931183639571e-221!GO:0043227;membrane-bound organelle;2.69539927700168e-160!GO:0043231;intracellular membrane-bound organelle;4.40478100067648e-160!GO:0043226;organelle;5.06653182398363e-149!GO:0043229;intracellular organelle;2.40932637858623e-148!GO:0005737;cytoplasm;6.78631752795855e-126!GO:0005634;nucleus;3.31272925900273e-87!GO:0043170;macromolecule metabolic process;2.35114080665041e-86!GO:0044422;organelle part;7.68443857665779e-83!GO:0044237;cellular metabolic process;1.10259333487693e-81!GO:0044446;intracellular organelle part;2.12407906859786e-81!GO:0044238;primary metabolic process;5.87297132846124e-81!GO:0005515;protein binding;6.35475132537947e-78!GO:0044444;cytoplasmic part;2.41475385931045e-77!GO:0032991;macromolecular complex;1.61484087630173e-69!GO:0044428;nuclear part;1.22679549836019e-65!GO:0003723;RNA binding;7.03158894866987e-65!GO:0043283;biopolymer metabolic process;2.65555222830915e-60!GO:0030529;ribonucleoprotein complex;7.37570106831587e-56!GO:0010467;gene expression;7.31126843662836e-51!GO:0043233;organelle lumen;7.4962437941608e-51!GO:0031974;membrane-enclosed lumen;7.4962437941608e-51!GO:0019538;protein metabolic process;1.04184293223352e-48!GO:0044267;cellular protein metabolic process;5.6157074430727e-46!GO:0044260;cellular macromolecule metabolic process;2.30002441798395e-45!GO:0033036;macromolecule localization;4.11182825036562e-45!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.08833275615786e-44!GO:0015031;protein transport;9.08833275615786e-44!GO:0045184;establishment of protein localization;1.84155763749234e-42!GO:0006412;translation;6.7813697270193e-42!GO:0008104;protein localization;1.37684685533626e-41!GO:0031981;nuclear lumen;1.8321134390087e-41!GO:0016071;mRNA metabolic process;1.53890965141665e-36!GO:0006396;RNA processing;2.49064151312904e-36!GO:0043234;protein complex;3.88233253113966e-36!GO:0016043;cellular component organization and biogenesis;8.75635645777024e-33!GO:0008380;RNA splicing;1.97016935768077e-31!GO:0012501;programmed cell death;3.21026828779991e-31!GO:0006915;apoptosis;3.31746502434433e-31!GO:0003676;nucleic acid binding;3.31746502434433e-31!GO:0005829;cytosol;1.2163377523421e-30!GO:0031090;organelle membrane;1.89367480615353e-30!GO:0009059;macromolecule biosynthetic process;3.26188752331088e-30!GO:0046907;intracellular transport;3.60376186676869e-30!GO:0008219;cell death;1.15949394634787e-29!GO:0016265;death;1.15949394634787e-29!GO:0005739;mitochondrion;2.00115388225885e-29!GO:0006397;mRNA processing;2.10729436915576e-29!GO:0006886;intracellular protein transport;4.55855647242734e-29!GO:0005840;ribosome;8.09126007272866e-29!GO:0016070;RNA metabolic process;3.26522362095022e-28!GO:0031967;organelle envelope;5.16180439807211e-28!GO:0031975;envelope;8.64852373550624e-28!GO:0005654;nucleoplasm;2.8657780573619e-27!GO:0000166;nucleotide binding;1.02818044416946e-25!GO:0003735;structural constituent of ribosome;2.07823598601866e-25!GO:0065003;macromolecular complex assembly;4.30566621890281e-25!GO:0033279;ribosomal subunit;5.71505485781891e-24!GO:0050794;regulation of cellular process;1.2043625657986e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.32194768111464e-23!GO:0044249;cellular biosynthetic process;1.97678867167968e-23!GO:0005681;spliceosome;2.00323298529571e-23!GO:0043412;biopolymer modification;2.04489893857222e-23!GO:0051641;cellular localization;2.9940369499885e-23!GO:0051649;establishment of cellular localization;3.28098223406993e-23!GO:0008134;transcription factor binding;5.38876882351275e-23!GO:0009058;biosynthetic process;5.9434258991623e-23!GO:0044451;nucleoplasm part;6.39701158947727e-23!GO:0006259;DNA metabolic process;2.37133669135637e-22!GO:0022607;cellular component assembly;3.35209918558414e-22!GO:0044429;mitochondrial part;6.99586583636182e-22!GO:0006512;ubiquitin cycle;1.11997398353219e-21!GO:0042981;regulation of apoptosis;1.41998178007916e-21!GO:0044445;cytosolic part;2.69598327232704e-21!GO:0043067;regulation of programmed cell death;2.96549951017404e-21!GO:0006464;protein modification process;3.51125945825264e-21!GO:0043687;post-translational protein modification;3.91694948581247e-21!GO:0006996;organelle organization and biogenesis;1.32449307096784e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.92674342395834e-20!GO:0032553;ribonucleotide binding;2.28589155586198e-19!GO:0032555;purine ribonucleotide binding;2.28589155586198e-19!GO:0050789;regulation of biological process;1.71428973632357e-18!GO:0044265;cellular macromolecule catabolic process;2.71685318691033e-18!GO:0017076;purine nucleotide binding;3.87790400336401e-18!GO:0002376;immune system process;1.73538773972966e-17!GO:0019941;modification-dependent protein catabolic process;2.45566216731472e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.45566216731472e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.69465875641539e-17!GO:0006511;ubiquitin-dependent protein catabolic process;2.99293453506601e-17!GO:0006913;nucleocytoplasmic transport;3.40764361268027e-17!GO:0048523;negative regulation of cellular process;3.45655154905679e-17!GO:0044257;cellular protein catabolic process;6.32905151295133e-17!GO:0051169;nuclear transport;7.57510559412556e-17!GO:0017111;nucleoside-triphosphatase activity;1.09567302111856e-16!GO:0006605;protein targeting;1.36446158603484e-16!GO:0016462;pyrophosphatase activity;1.36446158603484e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.51739614705752e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;2.13756980100881e-16!GO:0016874;ligase activity;2.18886271975031e-16!GO:0016604;nuclear body;2.70875252493755e-16!GO:0005740;mitochondrial envelope;4.42847950378921e-16!GO:0007243;protein kinase cascade;7.40687612043893e-16!GO:0043285;biopolymer catabolic process;1.08061816085797e-15!GO:0019222;regulation of metabolic process;1.29289050354998e-15!GO:0031966;mitochondrial membrane;1.29289050354998e-15!GO:0022618;protein-RNA complex assembly;2.09936221541583e-15!GO:0005524;ATP binding;2.88561365207623e-15!GO:0006793;phosphorus metabolic process;3.57998369837872e-15!GO:0006796;phosphate metabolic process;3.57998369837872e-15!GO:0016192;vesicle-mediated transport;4.24166156595234e-15!GO:0019866;organelle inner membrane;4.77264966115309e-15!GO:0007242;intracellular signaling cascade;5.73624310778675e-15!GO:0048519;negative regulation of biological process;5.86817943523493e-15!GO:0032559;adenyl ribonucleotide binding;6.35201968012448e-15!GO:0003712;transcription cofactor activity;2.00028839647882e-14!GO:0006366;transcription from RNA polymerase II promoter;2.31966754765493e-14!GO:0065007;biological regulation;2.70510827763157e-14!GO:0006119;oxidative phosphorylation;4.36400024116678e-14!GO:0005730;nucleolus;8.40933537961575e-14!GO:0009057;macromolecule catabolic process;9.39345644755229e-14!GO:0048770;pigment granule;1.15196931695648e-13!GO:0042470;melanosome;1.15196931695648e-13!GO:0030554;adenyl nucleotide binding;1.22090768429499e-13!GO:0016607;nuclear speck;1.52655432473456e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;2.11929518319588e-13!GO:0016310;phosphorylation;2.46634669224083e-13!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.89441577983505e-13!GO:0008135;translation factor activity, nucleic acid binding;4.3841602011476e-13!GO:0005635;nuclear envelope;6.93659004040195e-13!GO:0007049;cell cycle;7.63179166195251e-13!GO:0051246;regulation of protein metabolic process;9.44181095793685e-13!GO:0015935;small ribosomal subunit;1.07749320430911e-12!GO:0006955;immune response;1.16851202700637e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.30777649576285e-12!GO:0006323;DNA packaging;1.34139461758704e-12!GO:0005743;mitochondrial inner membrane;1.39840699618394e-12!GO:0030163;protein catabolic process;1.59327766429631e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.82440265246839e-12!GO:0031323;regulation of cellular metabolic process;2.05488435463737e-12!GO:0015934;large ribosomal subunit;2.37040961783917e-12!GO:0051276;chromosome organization and biogenesis;2.93908002304753e-12!GO:0012505;endomembrane system;4.33531224591227e-12!GO:0065009;regulation of a molecular function;4.3942950022889e-12!GO:0043228;non-membrane-bound organelle;5.23654031400248e-12!GO:0043232;intracellular non-membrane-bound organelle;5.23654031400248e-12!GO:0043069;negative regulation of programmed cell death;5.81003584155368e-12!GO:0017038;protein import;7.67707496647682e-12!GO:0043066;negative regulation of apoptosis;8.6984043668687e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.13609289568226e-11!GO:0044248;cellular catabolic process;1.27058553305987e-11!GO:0031965;nuclear membrane;1.35754978542693e-11!GO:0005794;Golgi apparatus;2.34270073770564e-11!GO:0016568;chromatin modification;2.38360088569639e-11!GO:0008639;small protein conjugating enzyme activity;4.00912156698053e-11!GO:0005768;endosome;4.69427734470547e-11!GO:0006916;anti-apoptosis;4.85876338606771e-11!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.36826346151942e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;5.36826346151942e-11!GO:0000375;RNA splicing, via transesterification reactions;5.36826346151942e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.36826346151942e-11!GO:0004842;ubiquitin-protein ligase activity;6.33220315614759e-11!GO:0031324;negative regulation of cellular metabolic process;8.85171157787203e-11!GO:0000502;proteasome complex (sensu Eukaryota);1.21048437323478e-10!GO:0019787;small conjugating protein ligase activity;1.50330400082836e-10!GO:0044455;mitochondrial membrane part;1.92154667968724e-10!GO:0010468;regulation of gene expression;2.5299308626621e-10!GO:0006606;protein import into nucleus;2.58946054762817e-10!GO:0051170;nuclear import;2.71226471366347e-10!GO:0003743;translation initiation factor activity;2.96725805587649e-10!GO:0048522;positive regulation of cellular process;4.62495381184532e-10!GO:0045321;leukocyte activation;5.36778224390608e-10!GO:0016564;transcription repressor activity;5.93314354056718e-10!GO:0006350;transcription;6.11454356544091e-10!GO:0004386;helicase activity;6.19353709113605e-10!GO:0051726;regulation of cell cycle;6.46772893021558e-10!GO:0006413;translational initiation;6.48719337136638e-10!GO:0006457;protein folding;6.56154147617374e-10!GO:0044453;nuclear membrane part;6.56813584124022e-10!GO:0006446;regulation of translational initiation;7.60973659704491e-10!GO:0006974;response to DNA damage stimulus;8.85611935275861e-10!GO:0005773;vacuole;1.14853919998852e-09!GO:0000074;regulation of progression through cell cycle;1.19387907546224e-09!GO:0009892;negative regulation of metabolic process;1.55584030509445e-09!GO:0016887;ATPase activity;1.68895237921795e-09!GO:0043065;positive regulation of apoptosis;1.74227301688115e-09!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.94020645069669e-09!GO:0048193;Golgi vesicle transport;1.96121957329393e-09!GO:0046649;lymphocyte activation;1.96121957329393e-09!GO:0042623;ATPase activity, coupled;1.96121957329393e-09!GO:0016563;transcription activator activity;2.25102220785069e-09!GO:0043068;positive regulation of programmed cell death;2.78584432585867e-09!GO:0005746;mitochondrial respiratory chain;3.34044666548308e-09!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.44469978147691e-09!GO:0003713;transcription coactivator activity;4.45925477505849e-09!GO:0019899;enzyme binding;4.8686996304902e-09!GO:0006917;induction of apoptosis;6.86917131988024e-09!GO:0007264;small GTPase mediated signal transduction;7.1225886061538e-09!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.28561502610113e-09!GO:0000323;lytic vacuole;7.70265205237014e-09!GO:0005764;lysosome;7.70265205237014e-09!GO:0016481;negative regulation of transcription;8.42218625871928e-09!GO:0048518;positive regulation of biological process;8.79720698529366e-09!GO:0008026;ATP-dependent helicase activity;9.22708701971907e-09!GO:0012502;induction of programmed cell death;1.2901469765274e-08!GO:0050136;NADH dehydrogenase (quinone) activity;1.34099838629452e-08!GO:0003954;NADH dehydrogenase activity;1.34099838629452e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.34099838629452e-08!GO:0006417;regulation of translation;1.38400301256844e-08!GO:0050657;nucleic acid transport;1.53892765709236e-08!GO:0051236;establishment of RNA localization;1.53892765709236e-08!GO:0050658;RNA transport;1.53892765709236e-08!GO:0016881;acid-amino acid ligase activity;1.72450789613612e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.8136268079314e-08!GO:0006403;RNA localization;2.01450976431531e-08!GO:0022402;cell cycle process;2.37113879743898e-08!GO:0042110;T cell activation;2.72287854160378e-08!GO:0005643;nuclear pore;3.30228999250268e-08!GO:0009967;positive regulation of signal transduction;3.38224490025396e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.19658668191594e-08!GO:0031980;mitochondrial lumen;5.04134075766342e-08!GO:0005759;mitochondrial matrix;5.04134075766342e-08!GO:0001775;cell activation;5.18137450063785e-08!GO:0045786;negative regulation of progression through cell cycle;5.5167855784718e-08!GO:0050790;regulation of catalytic activity;5.74932858339143e-08!GO:0009966;regulation of signal transduction;7.87413105923653e-08!GO:0019829;cation-transporting ATPase activity;1.06865724357488e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.23314247520159e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.43791377374857e-07!GO:0006950;response to stress;1.7011731179008e-07!GO:0006281;DNA repair;1.77369133406257e-07!GO:0005783;endoplasmic reticulum;1.84881012811485e-07!GO:0042775;organelle ATP synthesis coupled electron transport;1.92739265678324e-07!GO:0042773;ATP synthesis coupled electron transport;1.92739265678324e-07!GO:0045449;regulation of transcription;1.93267172620877e-07!GO:0051082;unfolded protein binding;2.00972208462778e-07!GO:0051186;cofactor metabolic process;2.12566358566046e-07!GO:0032774;RNA biosynthetic process;2.24295348979879e-07!GO:0006351;transcription, DNA-dependent;2.32660887092997e-07!GO:0016787;hydrolase activity;2.59124040851238e-07!GO:0006333;chromatin assembly or disassembly;2.68701204344784e-07!GO:0031326;regulation of cellular biosynthetic process;2.74690789635298e-07!GO:0032446;protein modification by small protein conjugation;2.82452454349542e-07!GO:0030695;GTPase regulator activity;3.1152570826139e-07!GO:0008565;protein transporter activity;3.16900487031545e-07!GO:0016740;transferase activity;3.88301757165036e-07!GO:0005770;late endosome;4.00399910523557e-07!GO:0030964;NADH dehydrogenase complex (quinone);4.03800909260293e-07!GO:0045271;respiratory chain complex I;4.03800909260293e-07!GO:0005747;mitochondrial respiratory chain complex I;4.03800909260293e-07!GO:0009889;regulation of biosynthetic process;4.23251223750666e-07!GO:0016567;protein ubiquitination;5.13221351698639e-07!GO:0003924;GTPase activity;5.13221351698639e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.26571471658066e-07!GO:0051028;mRNA transport;5.31852468330887e-07!GO:0006461;protein complex assembly;6.34233346960691e-07!GO:0004674;protein serine/threonine kinase activity;7.06895269134403e-07!GO:0005694;chromosome;7.16245762198498e-07!GO:0009615;response to virus;7.70932120763583e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.97640287102012e-07!GO:0003714;transcription corepressor activity;8.54817201316411e-07!GO:0005525;GTP binding;9.57161260355764e-07!GO:0043566;structure-specific DNA binding;1.0427787847592e-06!GO:0065004;protein-DNA complex assembly;1.04675333418058e-06!GO:0008047;enzyme activator activity;1.16899588788243e-06!GO:0003697;single-stranded DNA binding;1.23634569668769e-06!GO:0060090;molecular adaptor activity;1.51967334419494e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.68674019601678e-06!GO:0046930;pore complex;1.69820401515269e-06!GO:0048468;cell development;1.77992133389553e-06!GO:0042254;ribosome biogenesis and assembly;1.78624549305309e-06!GO:0009259;ribonucleotide metabolic process;2.14008506686747e-06!GO:0005793;ER-Golgi intermediate compartment;2.23098553667958e-06!GO:0009056;catabolic process;2.59501092900005e-06!GO:0008270;zinc ion binding;2.7404835806238e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.0060133692223e-06!GO:0001772;immunological synapse;3.04616551473027e-06!GO:0065002;intracellular protein transport across a membrane;3.21102577545031e-06!GO:0015986;ATP synthesis coupled proton transport;3.38874836638992e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.38874836638992e-06!GO:0009260;ribonucleotide biosynthetic process;3.73397887518117e-06!GO:0009152;purine ribonucleotide biosynthetic process;4.14934619970096e-06!GO:0006401;RNA catabolic process;4.24024210226692e-06!GO:0044432;endoplasmic reticulum part;4.27271113068453e-06!GO:0044440;endosomal part;4.48091198889448e-06!GO:0010008;endosome membrane;4.48091198889448e-06!GO:0030532;small nuclear ribonucleoprotein complex;4.58999655833584e-06!GO:0000151;ubiquitin ligase complex;4.68664361582096e-06!GO:0006164;purine nucleotide biosynthetic process;4.78703172840097e-06!GO:0007265;Ras protein signal transduction;5.23126120002965e-06!GO:0009150;purine ribonucleotide metabolic process;5.39568046262714e-06!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.44318095231871e-06!GO:0006732;coenzyme metabolic process;5.62271380759051e-06!GO:0008632;apoptotic program;5.69564352069817e-06!GO:0006163;purine nucleotide metabolic process;5.74728082580381e-06!GO:0045892;negative regulation of transcription, DNA-dependent;6.21233104271613e-06!GO:0006355;regulation of transcription, DNA-dependent;7.28243544795539e-06!GO:0016301;kinase activity;7.61472605622163e-06!GO:0009719;response to endogenous stimulus;7.96827174673484e-06!GO:0000785;chromatin;8.41254062290489e-06!GO:0030097;hemopoiesis;9.12070934769718e-06!GO:0044427;chromosomal part;9.66572738529866e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.2127067492188e-05!GO:0051168;nuclear export;1.24726484828292e-05!GO:0003724;RNA helicase activity;1.37470134994519e-05!GO:0016773;phosphotransferase activity, alcohol group as acceptor;1.37470134994519e-05!GO:0048475;coated membrane;1.52468134952766e-05!GO:0030117;membrane coat;1.52468134952766e-05!GO:0005083;small GTPase regulator activity;1.65726397625045e-05!GO:0032561;guanyl ribonucleotide binding;1.67248922353441e-05!GO:0019001;guanyl nucleotide binding;1.67248922353441e-05!GO:0002757;immune response-activating signal transduction;1.73970933671709e-05!GO:0009060;aerobic respiration;1.90443900596712e-05!GO:0005096;GTPase activator activity;2.09508311981837e-05!GO:0030120;vesicle coat;2.14308621097322e-05!GO:0030662;coated vesicle membrane;2.14308621097322e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.29454581943911e-05!GO:0006402;mRNA catabolic process;2.41399791308925e-05!GO:0005057;receptor signaling protein activity;2.45481089688365e-05!GO:0015078;hydrogen ion transmembrane transporter activity;2.67039482516832e-05!GO:0002764;immune response-regulating signal transduction;2.81710998501729e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.9814354853161e-05!GO:0006754;ATP biosynthetic process;3.06787901287252e-05!GO:0006753;nucleoside phosphate metabolic process;3.06787901287252e-05!GO:0005070;SH3/SH2 adaptor activity;3.16871782458798e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.25737878412775e-05!GO:0016197;endosome transport;3.34624422989881e-05!GO:0009142;nucleoside triphosphate biosynthetic process;3.36027615728729e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.36027615728729e-05!GO:0051336;regulation of hydrolase activity;4.03236218406799e-05!GO:0031252;leading edge;4.04205506099496e-05!GO:0000245;spliceosome assembly;4.05372446325474e-05!GO:0009199;ribonucleoside triphosphate metabolic process;4.22210063092714e-05!GO:0006468;protein amino acid phosphorylation;4.3993607635166e-05!GO:0051251;positive regulation of lymphocyte activation;4.74689688106744e-05!GO:0004298;threonine endopeptidase activity;5.23707583015016e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;5.32830927317435e-05!GO:0046034;ATP metabolic process;5.44256226568708e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.44256226568708e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.44256226568708e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.50279148655354e-05!GO:0045259;proton-transporting ATP synthase complex;5.71139393046268e-05!GO:0009893;positive regulation of metabolic process;6.1438908716212e-05!GO:0005774;vacuolar membrane;6.2847336125578e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.63878602584384e-05!GO:0009144;purine nucleoside triphosphate metabolic process;6.63878602584384e-05!GO:0005789;endoplasmic reticulum membrane;6.88371861098799e-05!GO:0002520;immune system development;7.80538072578819e-05!GO:0002768;immune response-regulating cell surface receptor signaling pathway;8.50649151670977e-05!GO:0009141;nucleoside triphosphate metabolic process;8.70881229570563e-05!GO:0046822;regulation of nucleocytoplasmic transport;9.41694694836459e-05!GO:0008234;cysteine-type peptidase activity;0.000105139104797005!GO:0051090;regulation of transcription factor activity;0.000106457970209089!GO:0016363;nuclear matrix;0.000106937553286827!GO:0006260;DNA replication;0.00010901503572278!GO:0016044;membrane organization and biogenesis;0.000111341976420888!GO:0006613;cotranslational protein targeting to membrane;0.000113816680458791!GO:0042101;T cell receptor complex;0.000115121243783889!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000122384770444152!GO:0051188;cofactor biosynthetic process;0.000125263260305366!GO:0031982;vesicle;0.000131574243648991!GO:0016072;rRNA metabolic process;0.000133731195850861!GO:0006364;rRNA processing;0.000139581431262876!GO:0005813;centrosome;0.000166299776428424!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000178429038990874!GO:0005765;lysosomal membrane;0.00017869286424379!GO:0051223;regulation of protein transport;0.000183424031055037!GO:0008186;RNA-dependent ATPase activity;0.000196073268423664!GO:0051338;regulation of transferase activity;0.000196531777190874!GO:0001816;cytokine production;0.000208124653071586!GO:0005769;early endosome;0.000228327590693123!GO:0005761;mitochondrial ribosome;0.000228327590693123!GO:0000313;organellar ribosome;0.000228327590693123!GO:0044431;Golgi apparatus part;0.000228708310506294!GO:0022415;viral reproductive process;0.000235947873959446!GO:0045333;cellular respiration;0.000239163299087507!GO:0001819;positive regulation of cytokine production;0.000252199503709116!GO:0005885;Arp2/3 protein complex;0.000253719079676588!GO:0044437;vacuolar part;0.00025551515793901!GO:0045941;positive regulation of transcription;0.000256483259899502!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000257857078645073!GO:0004812;aminoacyl-tRNA ligase activity;0.000257857078645073!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000257857078645073!GO:0051427;hormone receptor binding;0.000257857078645073!GO:0046983;protein dimerization activity;0.000266822145735638!GO:0031902;late endosome membrane;0.000268644874234534!GO:0002521;leukocyte differentiation;0.00030325102483206!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000325939943065015!GO:0043623;cellular protein complex assembly;0.000332588985076888!GO:0043549;regulation of kinase activity;0.000333210023849924!GO:0048534;hemopoietic or lymphoid organ development;0.000336225323674959!GO:0000278;mitotic cell cycle;0.000336225323674959!GO:0007005;mitochondrion organization and biogenesis;0.000364288119853149!GO:0031497;chromatin assembly;0.000370402220049023!GO:0005667;transcription factor complex;0.000374288811229869!GO:0016779;nucleotidyltransferase activity;0.000414840339086157!GO:0045893;positive regulation of transcription, DNA-dependent;0.000443942644546117!GO:0046914;transition metal ion binding;0.000443942644546117!GO:0006399;tRNA metabolic process;0.000444888566959309!GO:0031410;cytoplasmic vesicle;0.000448928686361953!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000456102375398877!GO:0050865;regulation of cell activation;0.000456102375398877!GO:0009108;coenzyme biosynthetic process;0.000456182826739886!GO:0035257;nuclear hormone receptor binding;0.000474747915909653!GO:0007050;cell cycle arrest;0.000476319352405104!GO:0003729;mRNA binding;0.000489835860530925!GO:0043038;amino acid activation;0.000507868736376093!GO:0006418;tRNA aminoacylation for protein translation;0.000507868736376093!GO:0043039;tRNA aminoacylation;0.000507868736376093!GO:0006334;nucleosome assembly;0.000528503108797572!GO:0006099;tricarboxylic acid cycle;0.000528503108797572!GO:0046356;acetyl-CoA catabolic process;0.000528503108797572!GO:0051249;regulation of lymphocyte activation;0.00053781231349892!GO:0048471;perinuclear region of cytoplasm;0.000555034455119883!GO:0009055;electron carrier activity;0.000561164212198395!GO:0004004;ATP-dependent RNA helicase activity;0.000571755237194449!GO:0005798;Golgi-associated vesicle;0.00058818301590152!GO:0032940;secretion by cell;0.000611635555331103!GO:0006607;NLS-bearing substrate import into nucleus;0.000639666611187524!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000660579710925571!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0006984373453378!GO:0015399;primary active transmembrane transporter activity;0.0006984373453378!GO:0008654;phospholipid biosynthetic process;0.0006984373453378!GO:0018193;peptidyl-amino acid modification;0.000715492479603268!GO:0005815;microtubule organizing center;0.000722302174324506!GO:0031325;positive regulation of cellular metabolic process;0.000751575073345317!GO:0045859;regulation of protein kinase activity;0.000776407947323076!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000791124651731424!GO:0042802;identical protein binding;0.000796586756289357!GO:0006919;caspase activation;0.00082696497088608!GO:0031988;membrane-bound vesicle;0.00082696497088608!GO:0005637;nuclear inner membrane;0.000834114242995273!GO:0050851;antigen receptor-mediated signaling pathway;0.000858317469774676!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000858317469774676!GO:0009607;response to biotic stimulus;0.000865091689279484!GO:0006752;group transfer coenzyme metabolic process;0.000894853085194118!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.000919681421048173!GO:0001817;regulation of cytokine production;0.000929840217406984!GO:0003677;DNA binding;0.000970141879716101!GO:0043087;regulation of GTPase activity;0.00100776667872001!GO:0006612;protein targeting to membrane;0.00106925581635355!GO:0030099;myeloid cell differentiation;0.00114952498727057!GO:0033157;regulation of intracellular protein transport;0.00117393210522318!GO:0042306;regulation of protein import into nucleus;0.00117393210522318!GO:0050870;positive regulation of T cell activation;0.00122837005092672!GO:0006611;protein export from nucleus;0.00124743127016563!GO:0006084;acetyl-CoA metabolic process;0.00138517854574202!GO:0030036;actin cytoskeleton organization and biogenesis;0.00141315346936576!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00149328121023457!GO:0043280;positive regulation of caspase activity;0.00153182119521367!GO:0007034;vacuolar transport;0.00159913085800854!GO:0003690;double-stranded DNA binding;0.001600913899261!GO:0043281;regulation of caspase activity;0.00163072333618075!GO:0030217;T cell differentiation;0.00163072333618075!GO:0016023;cytoplasmic membrane-bound vesicle;0.00165227000851577!GO:0042113;B cell activation;0.00165227000851577!GO:0017091;AU-rich element binding;0.00169910081226139!GO:0050779;RNA destabilization;0.00169910081226139!GO:0000289;poly(A) tail shortening;0.00169910081226139!GO:0019904;protein domain specific binding;0.00169910081226139!GO:0051092;activation of NF-kappaB transcription factor;0.00175297468365568!GO:0005741;mitochondrial outer membrane;0.00180145181530574!GO:0030658;transport vesicle membrane;0.00206264158792764!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00207540244513745!GO:0030098;lymphocyte differentiation;0.00210317515680542!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00212020384290261!GO:0045637;regulation of myeloid cell differentiation;0.00219053238073308!GO:0051187;cofactor catabolic process;0.00229250786526075!GO:0050863;regulation of T cell activation;0.00237663837566124!GO:0006891;intra-Golgi vesicle-mediated transport;0.00243415784838202!GO:0004672;protein kinase activity;0.00245419495049771!GO:0015631;tubulin binding;0.00250732760187651!GO:0042287;MHC protein binding;0.00266841878543814!GO:0001726;ruffle;0.00276984971297338!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00278072829317594!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00288057969537657!GO:0051252;regulation of RNA metabolic process;0.00288057969537657!GO:0006352;transcription initiation;0.0029433349653873!GO:0043021;ribonucleoprotein binding;0.00309060508230226!GO:0043492;ATPase activity, coupled to movement of substances;0.00309060508230226!GO:0043488;regulation of mRNA stability;0.00309060508230226!GO:0043487;regulation of RNA stability;0.00309060508230226!GO:0045045;secretory pathway;0.00313917710548836!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00317047025962078!GO:0019783;small conjugating protein-specific protease activity;0.00319425679608446!GO:0019867;outer membrane;0.00319557890977738!GO:0030384;phosphoinositide metabolic process;0.00322342751931444!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00325486394180025!GO:0042990;regulation of transcription factor import into nucleus;0.00325486394180025!GO:0042991;transcription factor import into nucleus;0.00325486394180025!GO:0050871;positive regulation of B cell activation;0.0032962408551534!GO:0005099;Ras GTPase activator activity;0.00339950602024478!GO:0008287;protein serine/threonine phosphatase complex;0.0034067343043999!GO:0032318;regulation of Ras GTPase activity;0.00341679705932713!GO:0006650;glycerophospholipid metabolic process;0.00341679705932713!GO:0000139;Golgi membrane;0.00343146724610419!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00343470428639483!GO:0043433;negative regulation of transcription factor activity;0.00351328325583585!GO:0009109;coenzyme catabolic process;0.00360892396137385!GO:0008624;induction of apoptosis by extracellular signals;0.00363019299698242!GO:0031968;organelle outer membrane;0.00363461788394376!GO:0016311;dephosphorylation;0.00364028352412871!GO:0002252;immune effector process;0.00377542808766314!GO:0031625;ubiquitin protein ligase binding;0.00378615511048654!GO:0004843;ubiquitin-specific protease activity;0.00382243022506165!GO:0016791;phosphoric monoester hydrolase activity;0.00382695578694167!GO:0006261;DNA-dependent DNA replication;0.00417036490786905!GO:0042613;MHC class II protein complex;0.00417922010664547!GO:0006897;endocytosis;0.00427433819659182!GO:0010324;membrane invagination;0.00427433819659182!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0043611364342064!GO:0019843;rRNA binding;0.00452531599125385!GO:0016251;general RNA polymerase II transcription factor activity;0.00454925162225095!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00455471529379626!GO:0045058;T cell selection;0.00475008955068428!GO:0030660;Golgi-associated vesicle membrane;0.00500320025643901!GO:0004722;protein serine/threonine phosphatase activity;0.00501941248202635!GO:0005048;signal sequence binding;0.00503132492416871!GO:0030218;erythrocyte differentiation;0.00505309271530734!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00518627837933383!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00518627837933383!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00518627837933383!GO:0006338;chromatin remodeling;0.00521988760118139!GO:0016584;nucleosome positioning;0.00526580144137236!GO:0006414;translational elongation;0.00539325634060125!GO:0007041;lysosomal transport;0.00547669965177089!GO:0030258;lipid modification;0.00547669965177089!GO:0009117;nucleotide metabolic process;0.00550513393937098!GO:0051098;regulation of binding;0.00554276060584017!GO:0051049;regulation of transport;0.00568694183722045!GO:0030118;clathrin coat;0.00575076609019145!GO:0051091;positive regulation of transcription factor activity;0.0057675539334439!GO:0003725;double-stranded RNA binding;0.00588098818832649!GO:0002440;production of molecular mediator of immune response;0.00591150547160734!GO:0033116;ER-Golgi intermediate compartment membrane;0.00591537810147741!GO:0051329;interphase of mitotic cell cycle;0.00593633960986777!GO:0051235;maintenance of localization;0.0060564981908818!GO:0002274;myeloid leukocyte activation;0.00628702945291594!GO:0000118;histone deacetylase complex;0.00656682821065277!GO:0008139;nuclear localization sequence binding;0.00657564454865637!GO:0006310;DNA recombination;0.00662049232563473!GO:0046519;sphingoid metabolic process;0.00676771365134916!GO:0015630;microtubule cytoskeleton;0.0068902339815256!GO:0004221;ubiquitin thiolesterase activity;0.0068902339815256!GO:0043085;positive regulation of catalytic activity;0.00723738770913193!GO:0019901;protein kinase binding;0.00729659750255187!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0073122795407765!GO:0006672;ceramide metabolic process;0.00731911642613688!GO:0045646;regulation of erythrocyte differentiation;0.00736924136509622!GO:0046966;thyroid hormone receptor binding;0.00748462060412054!GO:0032386;regulation of intracellular transport;0.00749690091516204!GO:0008017;microtubule binding;0.007581177208649!GO:0051789;response to protein stimulus;0.00781859687511749!GO:0006986;response to unfolded protein;0.00781859687511749!GO:0030518;steroid hormone receptor signaling pathway;0.00781859687511749!GO:0019079;viral genome replication;0.00781859687511749!GO:0048487;beta-tubulin binding;0.0078455486228217!GO:0051056;regulation of small GTPase mediated signal transduction;0.0079902141700225!GO:0019058;viral infectious cycle;0.00816015571070413!GO:0004428;inositol or phosphatidylinositol kinase activity;0.00834325971648984!GO:0031072;heat shock protein binding;0.00867875132956896!GO:0051325;interphase;0.00891845864600605!GO:0008637;apoptotic mitochondrial changes;0.00895697294406815!GO:0003746;translation elongation factor activity;0.00907152946228849!GO:0019882;antigen processing and presentation;0.00917877786367115!GO:0045603;positive regulation of endothelial cell differentiation;0.00925966716258244!GO:0006818;hydrogen transport;0.00940070770479844!GO:0043621;protein self-association;0.00940070770479844!GO:0030041;actin filament polymerization;0.00941396667244266!GO:0046578;regulation of Ras protein signal transduction;0.00950401918850205!GO:0006405;RNA export from nucleus;0.00962464211137818!GO:0005684;U2-dependent spliceosome;0.00967966775431387!GO:0000082;G1/S transition of mitotic cell cycle;0.00977204662897707!GO:0008629;induction of apoptosis by intracellular signals;0.0098390268831026!GO:0002443;leukocyte mediated immunity;0.00995756236034397!GO:0007259;JAK-STAT cascade;0.0101171425072688!GO:0019220;regulation of phosphate metabolic process;0.0103647384810378!GO:0051174;regulation of phosphorus metabolic process;0.0103647384810378!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0106643079580168!GO:0002819;regulation of adaptive immune response;0.0106643079580168!GO:0045792;negative regulation of cell size;0.0109488546699865!GO:0015992;proton transport;0.0109897301858495!GO:0033673;negative regulation of kinase activity;0.0111936436038388!GO:0006469;negative regulation of protein kinase activity;0.0111936436038388!GO:0030029;actin filament-based process;0.0113663157483961!GO:0031098;stress-activated protein kinase signaling pathway;0.0114912166064887!GO:0047485;protein N-terminus binding;0.0114982964320582!GO:0016585;chromatin remodeling complex;0.0114982964320582!GO:0030521;androgen receptor signaling pathway;0.011578950384492!GO:0043300;regulation of leukocyte degranulation;0.0116329033302523!GO:0051059;NF-kappaB binding;0.0120749234673584!GO:0045576;mast cell activation;0.0125271670099802!GO:0045926;negative regulation of growth;0.0125483994626545!GO:0003702;RNA polymerase II transcription factor activity;0.0128842870635706!GO:0051345;positive regulation of hydrolase activity;0.0131540610847815!GO:0016605;PML body;0.0131671500273716!GO:0006643;membrane lipid metabolic process;0.0132576211270656!GO:0048500;signal recognition particle;0.0134502404431214!GO:0046467;membrane lipid biosynthetic process;0.0135511277533089!GO:0030127;COPII vesicle coat;0.0135986899421819!GO:0012507;ER to Golgi transport vesicle membrane;0.0135986899421819!GO:0051348;negative regulation of transferase activity;0.0136730128280527!GO:0030308;negative regulation of cell growth;0.0137316508123426!GO:0015923;mannosidase activity;0.0137965515722622!GO:0000165;MAPKKK cascade;0.0143715538758751!GO:0043299;leukocyte degranulation;0.0144311938236894!GO:0005669;transcription factor TFIID complex;0.0148055370063587!GO:0045746;negative regulation of Notch signaling pathway;0.0148325531945533!GO:0045069;regulation of viral genome replication;0.0148620913292745!GO:0030674;protein binding, bridging;0.0148671817666834!GO:0031901;early endosome membrane;0.0148799061655128!GO:0030867;rough endoplasmic reticulum membrane;0.0157066452753777!GO:0040029;regulation of gene expression, epigenetic;0.016944456707756!GO:0006984;ER-nuclear signaling pathway;0.0170116660397972!GO:0000209;protein polyubiquitination;0.017336100478515!GO:0003711;transcription elongation regulator activity;0.0173455134884365!GO:0004185;serine carboxypeptidase activity;0.0173455134884365!GO:0050900;leukocyte migration;0.0174087236491296!GO:0006595;polyamine metabolic process;0.0175981991657459!GO:0022890;inorganic cation transmembrane transporter activity;0.0179892749664739!GO:0004197;cysteine-type endopeptidase activity;0.017998940645019!GO:0019900;kinase binding;0.018490937527041!GO:0004177;aminopeptidase activity;0.0187762320037377!GO:0005521;lamin binding;0.0187762320037377!GO:0006376;mRNA splice site selection;0.0189317897456556!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0189317897456556!GO:0030134;ER to Golgi transport vesicle;0.0190195627524126!GO:0051051;negative regulation of transport;0.0191870745263217!GO:0007040;lysosome organization and biogenesis;0.0192109501058227!GO:0006968;cellular defense response;0.019273226728969!GO:0022403;cell cycle phase;0.0192870364523671!GO:0043414;biopolymer methylation;0.0193830110043816!GO:0046474;glycerophospholipid biosynthetic process;0.0198199746994732!GO:0019210;kinase inhibitor activity;0.0198638151688715!GO:0003682;chromatin binding;0.0202764312117232!GO:0004721;phosphoprotein phosphatase activity;0.0207597460475053!GO:0001516;prostaglandin biosynthetic process;0.0210701169254123!GO:0046457;prostanoid biosynthetic process;0.0210701169254123!GO:0017166;vinculin binding;0.0217779613976881!GO:0004860;protein kinase inhibitor activity;0.0217779613976881!GO:0030176;integral to endoplasmic reticulum membrane;0.0217779613976881!GO:0050811;GABA receptor binding;0.0218812972727289!GO:0007254;JNK cascade;0.0220572277636279!GO:0003899;DNA-directed RNA polymerase activity;0.0222134827769677!GO:0030522;intracellular receptor-mediated signaling pathway;0.0226329122856525!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0226560836592762!GO:0045047;protein targeting to ER;0.0226560836592762!GO:0033549;MAP kinase phosphatase activity;0.0229271186646778!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0229271186646778!GO:0045185;maintenance of protein localization;0.0229582178125877!GO:0050864;regulation of B cell activation;0.0230476781895167!GO:0046489;phosphoinositide biosynthetic process;0.0231069047328316!GO:0043022;ribosome binding;0.0239935166725623!GO:0043681;protein import into mitochondrion;0.0244774604268716!GO:0046854;phosphoinositide phosphorylation;0.0245070352653532!GO:0006470;protein amino acid dephosphorylation;0.0246933345335289!GO:0003678;DNA helicase activity;0.0250331644085003!GO:0022411;cellular component disassembly;0.0254951991552031!GO:0030119;AP-type membrane coat adaptor complex;0.0256765907745317!GO:0001667;ameboidal cell migration;0.0257289486273556!GO:0032027;myosin light chain binding;0.0257289486273556!GO:0005791;rough endoplasmic reticulum;0.0257374867518418!GO:0019883;antigen processing and presentation of endogenous antigen;0.0260387995284826!GO:0006383;transcription from RNA polymerase III promoter;0.0260710668879896!GO:0051052;regulation of DNA metabolic process;0.0264092060602095!GO:0030027;lamellipodium;0.0268878403808291!GO:0002467;germinal center formation;0.0270484487317834!GO:0016790;thiolester hydrolase activity;0.0272302392539267!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0280548978038902!GO:0000060;protein import into nucleus, translocation;0.0280737521052334!GO:0008312;7S RNA binding;0.0281524749494451!GO:0006367;transcription initiation from RNA polymerase II promoter;0.028478856115887!GO:0016788;hydrolase activity, acting on ester bonds;0.0285434559894069!GO:0032763;regulation of mast cell cytokine production;0.0286908345974115!GO:0032762;mast cell cytokine production;0.0286908345974115!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0300629241341014!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0300629241341014!GO:0007006;mitochondrial membrane organization and biogenesis;0.0300719024911111!GO:0000303;response to superoxide;0.0301086076936576!GO:0032507;maintenance of cellular protein localization;0.0304282175353354!GO:0002444;myeloid leukocyte mediated immunity;0.0305505259386485!GO:0009299;mRNA transcription;0.0306289705657867!GO:0032200;telomere organization and biogenesis;0.0315332110455098!GO:0000723;telomere maintenance;0.0315332110455098!GO:0045454;cell redox homeostasis;0.0319267163679459!GO:0006354;RNA elongation;0.0319267163679459!GO:0033367;protein localization in mast cell secretory granule;0.0319267163679459!GO:0033365;protein localization in organelle;0.0319267163679459!GO:0033371;T cell secretory granule organization and biogenesis;0.0319267163679459!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0319267163679459!GO:0033375;protease localization in T cell secretory granule;0.0319267163679459!GO:0042629;mast cell granule;0.0319267163679459!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0319267163679459!GO:0033364;mast cell secretory granule organization and biogenesis;0.0319267163679459!GO:0033380;granzyme B localization in T cell secretory granule;0.0319267163679459!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0319267163679459!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0319267163679459!GO:0033368;protease localization in mast cell secretory granule;0.0319267163679459!GO:0033366;protein localization in secretory granule;0.0319267163679459!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0319267163679459!GO:0033374;protein localization in T cell secretory granule;0.0319267163679459!GO:0008154;actin polymerization and/or depolymerization;0.0321585422984338!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.03216203041628!GO:0006914;autophagy;0.032358520832977!GO:0042108;positive regulation of cytokine biosynthetic process;0.0328801581437299!GO:0045086;positive regulation of interleukin-2 biosynthetic process;0.0329251390107439!GO:0046426;negative regulation of JAK-STAT cascade;0.0334936362237105!GO:0043304;regulation of mast cell degranulation;0.0334936362237105!GO:0030131;clathrin adaptor complex;0.0336152207973058!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0337823689250528!GO:0007033;vacuole organization and biogenesis;0.0337984755559857!GO:0001836;release of cytochrome c from mitochondria;0.0342008170067874!GO:0000287;magnesium ion binding;0.0342008170067874!GO:0030833;regulation of actin filament polymerization;0.0343547732551464!GO:0050671;positive regulation of lymphocyte proliferation;0.0354845028039364!GO:0032946;positive regulation of mononuclear cell proliferation;0.0354845028039364!GO:0002218;activation of innate immune response;0.0354845028039364!GO:0002758;innate immune response-activating signal transduction;0.0354845028039364!GO:0005762;mitochondrial large ribosomal subunit;0.0354845028039364!GO:0000315;organellar large ribosomal subunit;0.0354845028039364!GO:0051087;chaperone binding;0.0359441500542857!GO:0032623;interleukin-2 production;0.0361017544502265!GO:0030125;clathrin vesicle coat;0.0362216727721751!GO:0030665;clathrin coated vesicle membrane;0.0362216727721751!GO:0030149;sphingolipid catabolic process;0.0362433559604298!GO:0030133;transport vesicle;0.0363956817802468!GO:0046834;lipid phosphorylation;0.0366249551540262!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0366893715897112!GO:0008276;protein methyltransferase activity;0.0367579531522849!GO:0008286;insulin receptor signaling pathway;0.0369787119697403!GO:0043506;regulation of JNK activity;0.0369787119697403!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0370979118473023!GO:0002448;mast cell mediated immunity;0.037569327398964!GO:0043303;mast cell degranulation;0.037569327398964!GO:0046979;TAP2 binding;0.0376472573229935!GO:0046977;TAP binding;0.0376472573229935!GO:0046978;TAP1 binding;0.0376472573229935!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0378494693898739!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.038016147896641!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0380545595121017!GO:0042608;T cell receptor binding;0.0383244684313851!GO:0045309;protein phosphorylated amino acid binding;0.0387501523243491!GO:0050792;regulation of viral reproduction;0.0387877666380258!GO:0048872;homeostasis of number of cells;0.039186155183526!GO:0051101;regulation of DNA binding;0.0392654905132856!GO:0033239;negative regulation of amine metabolic process;0.0392654905132856!GO:0045763;negative regulation of amino acid metabolic process;0.0392654905132856!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0392654905132856!GO:0005869;dynactin complex;0.0393963554788488!GO:0035258;steroid hormone receptor binding;0.0396358311281936!GO:0045647;negative regulation of erythrocyte differentiation;0.0397434917204454!GO:0042348;NF-kappaB import into nucleus;0.0403651590425461!GO:0042345;regulation of NF-kappaB import into nucleus;0.0403651590425461!GO:0002250;adaptive immune response;0.040519030632691!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.040519030632691!GO:0048002;antigen processing and presentation of peptide antigen;0.0406983740155863!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0419722140849001!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0423059250601048!GO:0006302;double-strand break repair;0.0430341783250729!GO:0006213;pyrimidine nucleoside metabolic process;0.043346925063328!GO:0000781;chromosome, telomeric region;0.0438862492672312!GO:0051050;positive regulation of transport;0.0439187794160805!GO:0015980;energy derivation by oxidation of organic compounds;0.0442247248431147!GO:0016569;covalent chromatin modification;0.0442247248431147!GO:0031461;cullin-RING ubiquitin ligase complex;0.0442627621157891!GO:0043407;negative regulation of MAP kinase activity;0.0448068229415175!GO:0044262;cellular carbohydrate metabolic process;0.0454204175134942!GO:0050852;T cell receptor signaling pathway;0.0457104342891651!GO:0006013;mannose metabolic process;0.0457104342891651!GO:0001562;response to protozoan;0.0462189931568721!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0463692751287139!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0463692751287139!GO:0000339;RNA cap binding;0.0465191790033148!GO:0032508;DNA duplex unwinding;0.0466179429185264!GO:0032392;DNA geometric change;0.0466179429185264!GO:0016505;apoptotic protease activator activity;0.0467431551837839!GO:0005085;guanyl-nucleotide exchange factor activity;0.047885914177099!GO:0051539;4 iron, 4 sulfur cluster binding;0.047885914177099!GO:0008383;manganese superoxide dismutase activity;0.047885914177099!GO:0001315;age-dependent response to reactive oxygen species;0.047885914177099!GO:0051707;response to other organism;0.0482730719660269!GO:0002718;regulation of cytokine production during immune response;0.0484315471619686!GO:0002367;cytokine production during immune response;0.0484315471619686!GO:0002700;regulation of production of molecular mediator of immune response;0.0484315471619686!GO:0045947;negative regulation of translational initiation;0.048445561590847!GO:0045621;positive regulation of lymphocyte differentiation;0.0484783175547351!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0486525848416412!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0486525848416412!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0486525848416412!GO:0000049;tRNA binding;0.0486838213247134!GO:0006661;phosphatidylinositol biosynthetic process;0.0488604867465852!GO:0002449;lymphocyte mediated immunity;0.048923443040112!GO:0001776;leukocyte homeostasis;0.0494764023538784!GO:0001784;phosphotyrosine binding;0.0495139924844702
|sample_id=11388
|sample_id=11388
|sample_note=
|sample_note=
Line 76: Line 105:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=PAX3,7:3.00618570612;ETS1,2:2.83160872023;NFKB1_REL_RELA:2.80055860987;RUNX1..3:2.73121596299;SPI1:2.63976606098;SPIB:2.43342029018;PAX2:2.42596737591;ATF5_CREB3:2.34055939932;ATF4:2.23236494904;CREB1:2.15301038268;ELF1,2,4:1.96887715035;NFIL3:1.93893733008;FOS_FOS{B,L1}_JUN{B,D}:1.81147710931;BACH2:1.70619271693;RXRA_VDR{dimer}:1.70259733751;NANOG{mouse}:1.66221224243;NFATC1..3:1.6517417755;IRF1,2:1.64784583694;CEBPA,B_DDIT3:1.63692845273;MAFB:1.63458823966;HIF1A:1.62569468886;DMAP1_NCOR{1,2}_SMARC:1.59498747829;TGIF1:1.56754446028;FOSL2:1.53896413857;NFE2:1.52358226252;HLF:1.4798992947;JUN:1.41818156055;HMX1:1.40357229981;FOXN1:1.38313315983;FOX{D1,D2}:1.32416163891;T:1.28893187279;FOXO1,3,4:1.18085509366;TLX2:1.17055002923;FOXP3:1.06944152451;BREu{core}:0.97839517259;IRF7:0.953565958123;RORA:0.929059562358;EP300:0.92199758083;EGR1..3:0.80431888194;RFX2..5_RFXANK_RFXAP:0.729258518129;ATF6:0.698081389673;SREBF1,2:0.694272187959;PITX1..3:0.67613037312;BPTF:0.674626800115;NFE2L1:0.671286644759;ATF2:0.662315796579;STAT2,4,6:0.648873726716;IKZF2:0.641999374448;RBPJ:0.36947569922;PAX6:0.3323084541;SMAD1..7,9:0.318918413746;HMGA1,2:0.302278691486;FOX{F1,F2,J1}:0.283813096494;POU2F1..3:0.274685893838;NFE2L2:0.194955904162;NKX2-1,4:0.190067054353;MYFfamily:0.15294435014;SPZ1:0.122104218864;ESR1:0.0664846262652;ZBTB16:0.0112192750968;STAT1,3:0.0106563850168;FOXP1:0.00833502897151;GLI1..3:-0.0128632090486;TBX4,5:-0.0197794971486;MYB:-0.0556764119817;GATA4:-0.0965569434427;PAX8:-0.151425278354;GATA6:-0.180874237687;GCM1,2:-0.189946724384;TFAP4:-0.206372371004;SOX2:-0.215221628084;TOPORS:-0.220783517065;HSF1,2:-0.239923669553;PPARG:-0.252008863433;CDX1,2,4:-0.258621836122;PDX1:-0.26250475337;MTE{core}:-0.281531078078;POU5F1:-0.292134897475;TFCP2:-0.297637993838;ALX4:-0.312323729661;AHR_ARNT_ARNT2:-0.318821793273;PATZ1:-0.339318700086;ZEB1:-0.355102608419;XBP1:-0.37077592685;FOXM1:-0.386660761757;NANOG:-0.396463300576;MZF1:-0.398981751004;HES1:-0.416698536177;MYOD1:-0.425773964595;OCT4_SOX2{dimer}:-0.434311681523;NHLH1,2:-0.444389986374;RREB1:-0.44529927158;TFAP2B:-0.457283379197;MEF2{A,B,C,D}:-0.480854281077;TFDP1:-0.511957478123;MED-1{core}:-0.517865405336;TFAP2{A,C}:-0.528706617518;HNF4A_NR2F1,2:-0.536351502863;ZFP161:-0.547395851396;STAT5{A,B}:-0.563144041473;PAX5:-0.589212311307;NR1H4:-0.594540623394;MTF1:-0.596614783122;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.600510176565;FOXD3:-0.611546232966;SP1:-0.642238521498;HBP1_HMGB_SSRP1_UBTF:-0.650830997838;RXR{A,B,G}:-0.65623744016;HIC1:-0.694065856414;SRF:-0.699016366671;ZNF148:-0.701315399199;SNAI1..3:-0.708026832402;PAX4:-0.709600289554;HOXA9_MEIS1:-0.712718747311;AIRE:-0.713217769336;TAL1_TCF{3,4,12}:-0.713710184034;ZNF384:-0.716131620396;E2F1..5:-0.731296733495;NR5A1,2:-0.737698656501;EN1,2:-0.770507240786;FOXA2:-0.78769090005;FOXL1:-0.795977819437;REST:-0.805823338026;LEF1_TCF7_TCF7L1,2:-0.822069992141;NKX3-1:-0.836052628408;ZNF423:-0.879711998724;PRRX1,2:-0.893665167484;XCPE1{core}:-0.898820670776;CUX2:-0.903466747959;HNF1A:-0.908337611366;PRDM1:-0.913633902268;MAZ:-0.965886445104;CRX:-0.990533167169;NKX6-1,2:-0.998428608123;ESRRA:-1.0242659669;ZNF238:-1.04577366178;IKZF1:-1.05491576758;LMO2:-1.0690125674;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.06950003624;HOX{A5,B5}:-1.08592553497;FOXQ1:-1.08877104747;NFY{A,B,C}:-1.09328133579;ELK1,4_GABP{A,B1}:-1.1057410402;VSX1,2:-1.12939938738;SOX5:-1.15960972069;EBF1:-1.19933099326;bHLH_family:-1.20411793646;TBP:-1.21587135418;DBP:-1.22444640524;SOX{8,9,10}:-1.2358527416;NR6A1:-1.26924042405;NRF1:-1.2719835334;RFX1:-1.27915441604;GZF1:-1.31503903606;ZBTB6:-1.3308857103;AR:-1.3706026287;EVI1:-1.40792724549;GTF2I:-1.42597326168;ZIC1..3:-1.48074616721;ADNP_IRX_SIX_ZHX:-1.54166049411;ALX1:-1.60639174452;TLX1..3_NFIC{dimer}:-1.61855078012;GTF2A1,2:-1.62267483073;FOX{I1,J2}:-1.63879074714;NFIX:-1.64298354138;PBX1:-1.66396114964;HOX{A6,A7,B6,B7}:-1.67571376752;ZNF143:-1.67915022011;CDC5L:-1.69304696795;TP53:-1.71995741556;POU6F1:-1.72926972283;NR3C1:-1.74246764834;TEAD1:-1.75541968115;YY1:-1.76834391871;POU3F1..4:-1.80801250495;NKX2-3_NKX2-5:-1.81680469376;UFEwm:-1.87863740851;MYBL2:-1.91757145394;GFI1B:-1.93238198469;NKX2-2,8:-1.96225449219;LHX3,4:-1.96861370164;TEF:-2.02646818626;HAND1,2:-2.0713221971;KLF4:-2.11035762823;SOX17:-2.11106245363;ARID5B:-2.16219560069;NKX3-2:-2.17083933528;GFI1:-2.1818639458;PAX1,9:-2.23088776998;POU1F1:-2.24406424223;ONECUT1,2:-2.3184344461;HOX{A4,D4}:-2.56906730897
|top_motifs=PAX3,7:3.00618570612;ETS1,2:2.83160872023;NFKB1_REL_RELA:2.80055860987;RUNX1..3:2.73121596299;SPI1:2.63976606098;SPIB:2.43342029018;PAX2:2.42596737591;ATF5_CREB3:2.34055939932;ATF4:2.23236494904;CREB1:2.15301038268;ELF1,2,4:1.96887715035;NFIL3:1.93893733008;FOS_FOS{B,L1}_JUN{B,D}:1.81147710931;BACH2:1.70619271693;RXRA_VDR{dimer}:1.70259733751;NANOG{mouse}:1.66221224243;NFATC1..3:1.6517417755;IRF1,2:1.64784583694;CEBPA,B_DDIT3:1.63692845273;MAFB:1.63458823966;HIF1A:1.62569468886;DMAP1_NCOR{1,2}_SMARC:1.59498747829;TGIF1:1.56754446028;FOSL2:1.53896413857;NFE2:1.52358226252;HLF:1.4798992947;JUN:1.41818156055;HMX1:1.40357229981;FOXN1:1.38313315983;FOX{D1,D2}:1.32416163891;T:1.28893187279;FOXO1,3,4:1.18085509366;TLX2:1.17055002923;FOXP3:1.06944152451;BREu{core}:0.97839517259;IRF7:0.953565958123;RORA:0.929059562358;EP300:0.92199758083;EGR1..3:0.80431888194;RFX2..5_RFXANK_RFXAP:0.729258518129;ATF6:0.698081389673;SREBF1,2:0.694272187959;PITX1..3:0.67613037312;BPTF:0.674626800115;NFE2L1:0.671286644759;ATF2:0.662315796579;STAT2,4,6:0.648873726716;IKZF2:0.641999374448;RBPJ:0.36947569922;PAX6:0.3323084541;SMAD1..7,9:0.318918413746;HMGA1,2:0.302278691486;FOX{F1,F2,J1}:0.283813096494;POU2F1..3:0.274685893838;NFE2L2:0.194955904162;NKX2-1,4:0.190067054353;MYFfamily:0.15294435014;SPZ1:0.122104218864;ESR1:0.0664846262652;ZBTB16:0.0112192750968;STAT1,3:0.0106563850168;FOXP1:0.00833502897151;GLI1..3:-0.0128632090486;TBX4,5:-0.0197794971486;MYB:-0.0556764119817;GATA4:-0.0965569434427;PAX8:-0.151425278354;GATA6:-0.180874237687;GCM1,2:-0.189946724384;TFAP4:-0.206372371004;SOX2:-0.215221628084;TOPORS:-0.220783517065;HSF1,2:-0.239923669553;PPARG:-0.252008863433;CDX1,2,4:-0.258621836122;PDX1:-0.26250475337;MTE{core}:-0.281531078078;POU5F1:-0.292134897475;TFCP2:-0.297637993838;ALX4:-0.312323729661;AHR_ARNT_ARNT2:-0.318821793273;PATZ1:-0.339318700086;ZEB1:-0.355102608419;XBP1:-0.37077592685;FOXM1:-0.386660761757;NANOG:-0.396463300576;MZF1:-0.398981751004;HES1:-0.416698536177;MYOD1:-0.425773964595;OCT4_SOX2{dimer}:-0.434311681523;NHLH1,2:-0.444389986374;RREB1:-0.44529927158;TFAP2B:-0.457283379197;MEF2{A,B,C,D}:-0.480854281077;TFDP1:-0.511957478123;MED-1{core}:-0.517865405336;TFAP2{A,C}:-0.528706617518;HNF4A_NR2F1,2:-0.536351502863;ZFP161:-0.547395851396;STAT5{A,B}:-0.563144041473;PAX5:-0.589212311307;NR1H4:-0.594540623394;MTF1:-0.596614783122;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.600510176565;FOXD3:-0.611546232966;SP1:-0.642238521498;HBP1_HMGB_SSRP1_UBTF:-0.650830997838;RXR{A,B,G}:-0.65623744016;HIC1:-0.694065856414;SRF:-0.699016366671;ZNF148:-0.701315399199;SNAI1..3:-0.708026832402;PAX4:-0.709600289554;HOXA9_MEIS1:-0.712718747311;AIRE:-0.713217769336;TAL1_TCF{3,4,12}:-0.713710184034;ZNF384:-0.716131620396;E2F1..5:-0.731296733495;NR5A1,2:-0.737698656501;EN1,2:-0.770507240786;FOXA2:-0.78769090005;FOXL1:-0.795977819437;REST:-0.805823338026;LEF1_TCF7_TCF7L1,2:-0.822069992141;NKX3-1:-0.836052628408;ZNF423:-0.879711998724;PRRX1,2:-0.893665167484;XCPE1{core}:-0.898820670776;CUX2:-0.903466747959;HNF1A:-0.908337611366;PRDM1:-0.913633902268;MAZ:-0.965886445104;CRX:-0.990533167169;NKX6-1,2:-0.998428608123;ESRRA:-1.0242659669;ZNF238:-1.04577366178;IKZF1:-1.05491576758;LMO2:-1.0690125674;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.06950003624;HOX{A5,B5}:-1.08592553497;FOXQ1:-1.08877104747;NFY{A,B,C}:-1.09328133579;ELK1,4_GABP{A,B1}:-1.1057410402;VSX1,2:-1.12939938738;SOX5:-1.15960972069;EBF1:-1.19933099326;bHLH_family:-1.20411793646;TBP:-1.21587135418;DBP:-1.22444640524;SOX{8,9,10}:-1.2358527416;NR6A1:-1.26924042405;NRF1:-1.2719835334;RFX1:-1.27915441604;GZF1:-1.31503903606;ZBTB6:-1.3308857103;AR:-1.3706026287;EVI1:-1.40792724549;GTF2I:-1.42597326168;ZIC1..3:-1.48074616721;ADNP_IRX_SIX_ZHX:-1.54166049411;ALX1:-1.60639174452;TLX1..3_NFIC{dimer}:-1.61855078012;GTF2A1,2:-1.62267483073;FOX{I1,J2}:-1.63879074714;NFIX:-1.64298354138;PBX1:-1.66396114964;HOX{A6,A7,B6,B7}:-1.67571376752;ZNF143:-1.67915022011;CDC5L:-1.69304696795;TP53:-1.71995741556;POU6F1:-1.72926972283;NR3C1:-1.74246764834;TEAD1:-1.75541968115;YY1:-1.76834391871;POU3F1..4:-1.80801250495;NKX2-3_NKX2-5:-1.81680469376;UFEwm:-1.87863740851;MYBL2:-1.91757145394;GFI1B:-1.93238198469;NKX2-2,8:-1.96225449219;LHX3,4:-1.96861370164;TEF:-2.02646818626;HAND1,2:-2.0713221971;KLF4:-2.11035762823;SOX17:-2.11106245363;ARID5B:-2.16219560069;NKX3-2:-2.17083933528;GFI1:-2.1818639458;PAX1,9:-2.23088776998;POU1F1:-2.24406424223;ONECUT1,2:-2.3184344461;HOX{A4,D4}:-2.56906730897
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11388-118C2;search_select_hide=table117:FF:11388-118C2
}}
}}

Latest revision as of 17:57, 4 June 2020

Name:Peripheral Blood Mononuclear Cells, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12002
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage46 years old adult
sexmale
age46
cell typemononuclear cell
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberPBMC724
catalog number3H100-10-10
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004845
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12002 CAGE DRX008403 DRR009275
Accession ID Hg19

Library idBAMCTSS
CNhs12002 DRZ000700 DRZ002085
Accession ID Hg38

Library idBAMCTSS
CNhs12002 DRZ012050 DRZ013435
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004845
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10005.ACTTGA sRNA-Seq DRX037061 DRR041427
Accession ID Hg19

Library idBAMCTSS
SRhi10005.ACTTGA DRZ007069


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.154
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.154
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0482
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.154
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.299
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.292
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.358
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.186
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.044
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.215
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.329
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.397
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40.044
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.154
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.583
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.479
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.154
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.511
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.054
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.481
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.215
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.268
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.102
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.397
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.279
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.215
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.152
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.044
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.242
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.044
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.242
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.146
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0.00559
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.645
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.641
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.466
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.418
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.268
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.511
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.186
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.396
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.524
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.482
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.292
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.538
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0569
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.371
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.432
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.154
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.215
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0.084
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.121
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.837
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.358
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.084
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.044
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.292
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340.154
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.154
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.186
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.525
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12002

Jaspar motifP-value
MA0002.27.7141e-12
MA0003.10.508
MA0004.10.79
MA0006.10.594
MA0007.10.505
MA0009.10.0269
MA0014.10.616
MA0017.10.461
MA0018.21.39792e-4
MA0019.10.466
MA0024.10.0201
MA0025.16.51828e-5
MA0027.10.655
MA0028.10.351
MA0029.10.441
MA0030.10.165
MA0031.10.126
MA0035.20.736
MA0038.10.0946
MA0039.20.733
MA0040.10.565
MA0041.10.805
MA0042.10.859
MA0043.11.7298e-8
MA0046.10.0375
MA0047.20.794
MA0048.10.567
MA0050.14.14919e-9
MA0051.10.00114
MA0052.10.127
MA0055.10.283
MA0057.10.246
MA0058.10.708
MA0059.10.849
MA0060.13.74263e-7
MA0061.13.58033e-24
MA0062.25.95825e-5
MA0065.20.417
MA0066.10.0715
MA0067.15.16598e-5
MA0068.10.377
MA0069.10.741
MA0070.10.0407
MA0071.10.461
MA0072.10.506
MA0073.10.0872
MA0074.10.203
MA0076.10.681
MA0077.10.111
MA0078.10.66
MA0079.20.627
MA0080.21.84477e-15
MA0081.12.15211e-4
MA0083.10.131
MA0084.10.727
MA0087.10.797
MA0088.10.354
MA0090.10.00808
MA0091.10.504
MA0092.10.997
MA0093.10.939
MA0099.21.13561e-29
MA0100.10.473
MA0101.12.5533e-21
MA0102.26.20072e-11
MA0103.10.236
MA0104.20.539
MA0105.12.76981e-15
MA0106.10.0854
MA0107.11.79788e-25
MA0108.20.00531
MA0111.10.483
MA0112.20.112
MA0113.10.294
MA0114.10.861
MA0115.10.204
MA0116.10.00297
MA0117.10.00605
MA0119.10.698
MA0122.10.974
MA0124.10.79
MA0125.10.0854
MA0131.10.794
MA0135.10.419
MA0136.11.09924e-19
MA0137.20.557
MA0138.20.166
MA0139.10.897
MA0140.10.72
MA0141.10.62
MA0142.10.38
MA0143.10.149
MA0144.10.196
MA0145.10.575
MA0146.10.171
MA0147.10.689
MA0148.10.847
MA0149.10.748
MA0150.13.79299e-11
MA0152.10.0662
MA0153.10.00287
MA0154.19.45647e-4
MA0155.10.821
MA0156.14.3765e-18
MA0157.10.188
MA0159.10.191
MA0160.10.168
MA0162.10.332
MA0163.12.68095e-4
MA0164.10.615
MA0258.10.0741
MA0259.10.613



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12002

Novel motifP-value
10.471
100.0141
1000.545
1010.796
1020.784
1030.66
1040.503
1050.0937
1065.49434e-4
1070.959
1080.649
1090.26
110.324
1100.913
1110.12
1120.508
1130.0883
1140.208
1150.307
1160.659
1170.0171
1180.268
1190.624
120.242
1200.749
1210.374
1220.281
1230.00893
1240.548
1250.531
1260.206
1270.526
1280.0741
1290.886
130.492
1300.338
1310.679
1320.103
1330.599
1340.809
1350.548
1360.945
1370.00499
1380.211
1390.0359
140.326
1400.3
1410.615
1420.359
1430.00192
1440.596
1450.664
1460.72
1470.16
1480.066
1490.716
150.173
1500.686
1510.141
1520.255
1530.665
1540.352
1550.201
1560.77
1570.952
1580.0308
1590.164
160.982
1600.796
1610.499
1620.0537
1630.346
1640.0632
1650.372
1660.547
1670.319
1680.0126
1690.376
170.442
180.349
190.528
20.853
200.465
210.81
220.513
230.129
240.689
250.199
260.382
270.841
280.367
290.123
30.319
300.309
310.931
320.0195
330.511
340.697
350.0997
360.26
370.18
380.593
390.941
40.996
400.653
410.00988
420.372
430.0493
440.557
450.926
460.411
470.825
480.718
490.14
50.329
500.769
510.478
520.546
530.175
540.592
550.924
560.831
570.892
580.103
590.339
60.92
600.0903
610.183
620.0818
630.889
640.464
650.351
660.0404
670.454
680.208
690.428
70.343
700.13
710.0908
720.184
730.219
740.225
750.109
760.123
770.805
780.255
790.912
80.752
800.023
810.44
820.175
830.678
840.0435
850.0964
860.0158
870.398
880.712
890.597
90.318
900.203
910.484
920.338
930.753
940.138
950.14
960.712
970.966
980.168
999.43601e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12002


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000226 (single nucleate cell)
0000080 (circulating cell)
0000842 (mononuclear cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000178 (blood)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000135 (human peripheral blood mononuclear cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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