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{{f5samples
{{f5samples
|id=FF:11427-118G5
|DRA_sample_Accession=CAGE@SAMD00004672
|name=Placental Epithelial Cells, donor3
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004672
|sample_id=11427
|accession_numbers=CAGE;DRX008406;DRR009278;DRZ000703;DRZ002088;DRZ012053;DRZ013438
|rna_tube_id=118G5
|accession_numbers_RNASeq=sRNA-Seq;DRX037114;DRR041480;DRZ007122
|rna_box=118
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001987,UBERON:0005156,UBERON:0004119,UBERON:0000062,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000478,UBERON:0010317,UBERON:0003100,UBERON:0000474
|rna_position=G5
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000349,CL:0000255,CL:0002577
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Cell Applications
|rna_lot_number=2637
|rna_catalog_number=CA230-R10f
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=placenta
|sample_donor(cell lot)=
|sample_sex=unknown
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=placental epithelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs12037,LSID837,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10008,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000144,CL:0000255,CL:0000349,CL:0000548,CL:0002371,CL:0002577
|ancestors_in_anatomy_facet=
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000136
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr5:153857778..153857794,-!p1@HAND1!2.92!831.57!HAND1;;chr2:19558373..19558392,-!p1@OSR1!2.13!348.96!OSR1;;chr19:46801639..46801699,+!p1@HIF3A!2.01!101.60!HIF3A;;chr10:8096631..8096660,+!p1@GATA3!1.91!96.16!GATA3;;chr3:111314186..111314204,-!p1@ZBED2!1.87!72.88!ZBED2;;chr19:46800289..46800327,+!p2@HIF3A!1.87!72.88!HIF3A;;chr8:102504651..102504683,+!p1@GRHL2!1.71!50.80!GRHL2;;chr17:7493405..7493419,-!p1@SOX15!1.70!49.59!SOX15;;chr10:8096772..8096787,+!p2@GATA3!1.61!47.17!GATA3;;chr1:38512457..38512474,-!p1@POU3F1!1.61!42.94!POU3F1;;chr5:3595977..3595999,+!p1@IRX1!1.59!37.80!IRX1;;chr6:10412600..10412637,-!p1@TFAP2A!1.58!60.48!TFAP2A;;chr20:39317868..39317884,-!p1@MAFB!1.57!411.25!MAFB;;chr5:3595934..3595957,+!p2@IRX1!1.57!36.29!IRX1;;chr4:188916918..188916942,+!p1@ZFP42!1.56!35.08!ZFP42;;chr5:153857800..153857812,-!p2@HAND1!1.55!34.47!HAND1;;chr11:46299199..46299233,+!p1@CREB3L1!1.54!168.43!CREB3L1;;chr8:49833948..49833973,-!p2@SNAI2!1.50!185.67!SNAI2;;chr6:10415276..10415341,-!p2@TFAP2A!1.48!35.08!TFAP2A;;chr8:49833978..49833996,-!p1@SNAI2!1.45!533.11!SNAI2;;chr5:2751762..2751784,-!p1@IRX2!1.43!25.70!IRX2;;chr5:3595961..3595975,+!p3@IRX1!1.41!24.80!IRX1;;chr8:102504690..102504704,+!p3@GRHL2!1.41!24.49!GRHL2;;chr20:55204351..55204377,+!p1@TFAP2C!1.40!30.84!TFAP2C;;chr11:46299539..46299620,+!p2@CREB3L1!1.36!36.89!CREB3L1;;chr4:174451370..174451387,-!p1@HAND2!1.36!21.77!HAND2;;chr8:55370487..55370503,+!p1@SOX17!1.32!19.66!SOX17;;chr1:209979467..209979494,-!p1@IRF6!1.30!21.47!IRF6;;chr4:174450089..174450153,-!p2@HAND2!1.30!19.05!HAND2;;chr19:46806868..46806883,+!p3@HIF3A!1.29!18.45!HIF3A;;chr2:46524897..46524911,+!p2@EPAS1!1.28!50.20!EPAS1;;chr16:31076332..31076388,-!p3@ZNF668!1.22!15.42!ZNF668;;chr8:102504979..102505010,+!p2@GRHL2!1.22!15.42!GRHL2;;chr10:8095593..8095625,+!p3@GATA3!1.20!17.24!GATA3;;chr10:48355030..48355090,+!p1@ZNF488!1.19!18.75!ZNF488;;chr1:59249732..59249749,-!p2@JUN!1.17!164.80!JUN;;chr5:153857819..153857824,-!p3@HAND1!1.16!13.31!HAND1;;chr11:113930425..113930471,+!p1@ZBTB16!1.14!18.45!ZBTB16;;chr9:110251836..110251887,-!p4@KLF4!1.14!16.93!KLF4;;chr6:10415484..10415508,-!p3@TFAP2A!1.12!12.10!TFAP2A;;chr9:110252035..110252057,-!p1@KLF4!1.09!179.62!KLF4;;chr2:19558327..19558334,-!p2@OSR1!1.09!11.19!OSR1;;chr6:10412392..10412409,-!p4@TFAP2A!1.08!12.70!TFAP2A;;chr5:174151553..174151610,+!p1@MSX2!1.06!17.54!MSX2;;chr17:46132044..46132080,+!p4@NFE2L1!1.06!10.58!NFE2L1;;chr2:5832508..5832524,+!p1@SOX11!1.05!10.28!SOX11;;chr12:66218836..66218888,+!p1@HMGA2!1.04!94.65!HMGA2;;chr15:96869255..96869291,+!p6@NR2F2!1.04!18.14!NR2F2;;chr6:32095523..32095564,-!p2@ATF6B!1.04!13.61!ATF6B;;chr2:16080659..16080685,+!p1@MYCN!1.03!9.68!MYCN;;chr20:42295745..42295765,+!p1@MYBL2!1.02!156.94!MYBL2;;chr20:18038521..18038571,-!p1@OVOL2!1.02!9.37!OVOL2;;chr17:7492684..7492778,-!p2@SOX15!0.99!18.75!SOX15;;chr15:96869511..96869525,+!p16@NR2F2!0.95!8.77!NR2F2;;chr20:42295713..42295738,+!p2@MYBL2!0.94!47.48!MYBL2;;chr6:85473156..85473210,-!p2@TBX18!0.93!9.37!TBX18;;chr4:299227..299272,-!p1@ZNF732!0.93!7.56!ZNF732;;chr8:80679993..80680011,-!p1@HEY1!0.92!10.89!HEY1;;chr1:6479968..6479986,-!p1@HES2!0.92!7.26!HES2;;chr11:46333934..46333963,+!p5@CREB3L1!0.92!7.26!CREB3L1;;chr3:111314230..111314241,-!p2@ZBED2!0.92!7.26!ZBED2;;chr8:28243785..28243799,-!p6@ZNF395!0.91!8.77!ZNF395;;chr14:75988771..75988826,+!p1@BATF!0.90!9.37!BATF;;chr9:110250697..110250738,-!p2@KLF4!0.90!8.16!KLF4;;chr5:2751785..2751808,-!p2@IRX2!0.90!6.95!IRX2;;chr6:10412576..10412599,-!p5@TFAP2A!0.90!6.95!TFAP2A;;chr15:96869292..96869320,+!p15@NR2F2!0.89!9.98!NR2F2;;chr5:176738887..176738934,-!p1@MXD3!0.88!46.57!MXD3;;chr16:67881588..67881612,-!p2@CENPT!0.88!9.07!CENPT;;chr10:8100691..8100732,+!p5@GATA3!0.87!6.35!GATA3;;chr2:60780607..60780624,-!p2@BCL11A!0.85!19.66!BCL11A;;chr2:231084820..231084836,-!p5@SP110!0.83!6.65!SP110;;chr5:3596206..3596210,+!p4@IRX1!0.83!5.75!IRX1;;chr1:59249707..59249727,-!p1@JUN!0.82!252.50!JUN;;chr11:47236584..47236679,+!p1@DDB2!0.82!65.32!DDB2;;chr19:926055..926068,+!p2@ARID3A!0.81!12.70!ARID3A;;chr8:28243813..28243839,-!p4@ZNF395!0.81!10.28!ZNF395;;chr19:17356189..17356221,-!p2@NR2F6!0.81!9.37!NR2F6;;chr17:45928443..45928473,-!p2@SP6!0.81!5.44!SP6;;chr6:10413188..10413249,-!p7@TFAP2A!0.81!5.44!TFAP2A;;chr8:102504932..102504952,+!p4@GRHL2!0.81!5.44!GRHL2;;chrY:21906594..21906622,-!p1@KDM5D!0.81!5.44!KDM5D;;chrX:106960285..106960299,-!p1@TSC22D3!0.80!156.34!TSC22D3;;chr16:29817841..29817865,+!p1@MAZ!0.80!123.38!MAZ;;chr3:24536253..24536328,-!p1@THRB!0.80!10.58!THRB;;chr2:46524878..46524891,+!p3@EPAS1!0.80!9.68!EPAS1;;chr19:7580944..7581031,+!p1@ZNF358!0.79!171.15!ZNF358;;chr19:45908292..45908374,-!p1@PPP1R13L!0.79!49.89!PPP1R13L;;chr19:1592714..1592762,-!p1@MBD3!0.79!42.64!MBD3;;chr9:117150254..117150271,-!p1@AKNA!0.79!15.12!AKNA;;chr1:33721900..33721921,+!p2@ZNF362!0.79!13.31!ZNF362;;chr20:2673383..2673441,+!p1@EBF4!0.79!8.47!EBF4;;chr11:46299443..46299459,+!p4@CREB3L1!0.79!5.14!CREB3L1;;chr13:7363313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CFL5!0.21!0.60!TCFL5;;chr21:30671121..30671126,+!p14@BACH1!0.21!0.60!BACH1;;chr21:38071403..38071428,+!p2@SIM2!0.21!0.60!SIM2;;chr14:99738138..99738163,-!p1@BCL11B!0.21!0.60!BCL11B;;chr15:31618889..31618902,+!p15@KLF13!0.21!0.60!KLF13;;chr15:37391614..37391626,-!p18@MEIS2!0.21!0.60!MEIS2;;chr15:66994523..66994541,+!p5@SMAD6!0.21!0.60!SMAD6;;chr16:30102828..30102840,-!p5@TBX6!0.21!0.60!TBX6;;chr16:30102849..30102865,-!p2@TBX6!0.21!0.60!TBX6;;chr16:3185079..3185081,+!p7@ZNF213!0.21!0.60!ZNF213;;chr17:3571934..3571935,-!p3@TAX1BP3!0.21!0.60!TAX1BP3;;chr17:41623716..41623727,-!p12@ETV4!0.21!0.60!ETV4;;chr17:46622175..46622186,-!p12@HOXB2!0.21!0.60!HOXB2;;chr17:4981535..4981551,+!p2@ZFP3!0.21!0.60!ZFP3;;chr17:56565257..56565283,-!p2@HSF5!0.21!0.60!HSF5;;chr17:59529743..59529798,+!p1@TBX4!0.21!0.60!TBX4;;chr17:7382810..7382822,-!p12@ZBTB4!0.21!0.60!ZBTB4;;chr17:7492504..7492520,-!p3@SOX15!0.21!0.60!SOX15;;chr18:22932004..22932021,-!p2@ZNF521!0.21!0.60!ZNF521;;chr18:47808050..47808060,-!p4@MBD1!0.21!0.60!MBD1;;chr18:74207227..74207238,-!p5@ZNF516!0.21!0.60!ZNF516;;chr19:11998716..11998727,+!p3@ZNF69!0.21!0.60!ZNF69;;chr19:18391642..18391645,-!p10@JUND!0.21!0.60!JUND;;chr19:18391785..18391792,-!p9@JUND!0.21!0.60!JUND;;chr19:1863887..1863918,-!p6@KLF16!0.21!0.60!KLF16;;chr19:22605136..22605154,-!p1@ZNF98!0.21!0.60!ZNF98;;chr19:31840168..31840186,-!p6@TSHZ3!0.21!0.60!TSHZ3;;chr19:31840278..31840300,-!p5@TSHZ3!0.21!0.60!TSHZ3;;chr19:3574400..3574430,+!p6@HMG20B!0.21!0.60!HMG20B;;chr5:174151648..174151659,+!p3@MSX2!0.21!0.60!MSX2;;chr6:10412338..10412345,-!p17@TFAP2A!0.21!0.60!TFAP2A;;chr6:10412640..10412655,-!p14@TFAP2A!0.21!0.60!TFAP2A;;chr6:10415645..10415675,-!p19@TFAP2A!0.21!0.60!TFAP2A;;chr6:15245824..15245846,+!p13@JARID2!0.21!0.60!JARID2;;chr6:1612300..1612324,+!p3@FOXC1!0.21!0.60!FOXC1;;chr6:32158046..32158055,-!p4@PBX2!0.21!0.60!PBX2;;chr6:32158286..32158296,-!p12@PBX2!0.21!0.60!PBX2;;chr6:391743..391759,+!p1@IRF4!0.21!0.60!IRF4;;chr6:41701581..41701613,-!p2@TFEB!0.21!0.60!TFEB;;chr6:42419928..42419963,-!p6@TRERF1!0.21!0.60!TRERF1;;chr6:50786591..50786614,+!p1@TFAP2B!0.21!0.60!TFAP2B;;chr7:138665915..138665946,-!p3@KIAA1549!0.21!0.60!KIAA1549;;chr7:138666354..138666370,-!p6@KIAA1549!0.21!0.60!KIAA1549;;chr7:150102756..150102772,+!p5@ZNF775!0.21!0.60!ZNF775;;chr7:15726243..15726293,-!p2@MEOX2!0.21!0.60!MEOX2;;chr7:27190547..27190591,-!p1@HOXA6!0.21!0.60!HOXA6;;chr7:27205136..27205164,-!p1@HOXA9!0.21!0.60!HOXA9;;chr7:42276771..42276782,-!p4@GLI3!0.21!0.60!GLI3;;chr7:96654133..96654150,-!p1@DLX5!0.21!0.60!DLX5;;chr7:97840743..97840786,+!p1@BHLHA15!0.21!0.60!BHLHA15;;chr8:93074848..93074871,-!p3@RUNX1T1!0.21!0.60!RUNX1T1;;chr8:93115274..93115323,-!p4@RUNX1T1!0.21!0.60!RUNX1T1;;chr8:93115584..93115642,-!p5@RUNX1T1!0.21!0.60!RUNX1T1;;chr9:100615499..100615519,+!p1@FOXE1!0.21!0.60!FOXE1;;chr9:117139023..117139030,-!p5@AKNA!0.21!0.60!AKNA;;chr2:70314601..70314622,+!p1@PCBP1!0.20!336.56!PCBP1;;chr12:8185288..8185339,+!p1@FOXJ2!0.20!14.21!FOXJ2;;chr6:32095968..32096032,-!p1@ATF6B!0.20!11.79!ATF6B;;chr1:6640046..6640101,+!p1@ZBTB48!0.20!10.58!ZBTB48;;chr17:36861393..36861439,+!p2@MLLT6!0.20!7.86!MLLT6;;chr19:21106049..21106072,+!p1@ZNF85!0.20!7.26!ZNF85;;chr1:249132484..249132505,+!p4@ZNF672!0.20!3.63!ZNF672;;chr19:53868940..53868990,+!p1@ZNF525,p2@ZNF765!0.20!3.33!ZNF525;;chr6:41040923..41040952,+!p2@NFYA!0.20!3.02!NFYA;;chr22:46546406..46546440,+!p1@PPARA!0.20!2.72!PPARA;;chr19:33864571..33864596,+!p2@CEBPG!0.20!2.72!CEBPG;;chr6:7108855..7108903,+!p5@RREB1!0.20!2.42!RREB1;;chr19:15560730..15560772,-!p3@WIZ!0.20!2.12!WIZ;;chr7:44143978..44143989,+!p2@AEBP1!0.20!1.81!AEBP1;;chr6:122720837..122720857,+!p2@HSF2!0.20!1.21!HSF2;;chr8:145159846..145159889,+!p6@MAF1!0.20!1.21!MAF1;;chr15:57210692..57210713,-!p5@ZNF280D!0.20!1.21!ZNF280D;;chr14:62213827..62213853,+!p6@HIF1A!0.20!1.21!HIF1A;;chr9:35732514..35732530,+!p5@CREB3!0.20!1.21!CREB3;;chr12:66218003..66218018,+!p9@HMGA2!0.20!0.91!HMGA2;;chr6:28973366..28973394,-!p2@ZNF311!0.20!0.91!ZNF311;;chr7:148844205..148844236,+!p5@ZNF398!0.20!0.91!ZNF398;;chr15:37392576..37392589,-!p12@MEIS2!0.20!0.91!MEIS2;;chr19:23299814..23299844,+!p1@ZNF730!0.20!0.91!ZNF730;;chr1:41204530..41204541,+!p8@NFYC!0.20!0.91!NFYC;;chr14:62162224..62162254,+!p1@HIF1A!0.19!205.63!HIF1A;;chr22:42229100..42229146,+!p1@SREBF2!0.19!139.70!SREBF2;;chr7:100076765..100076861,-!p1@TSC22D4!0.19!48.38!TSC22D4;;chr16:88636795..88636827,+!p1@ZC3H18!0.19!33.26!ZC3H18;;chr16:3930681..3930721,-!p1@CREBBP!0.19!24.19!CREBBP;;chr16:67226019..67226127,+!p1@E2F4!0.19!17.84!E2F4;;chr11:62369108..62369183,-!p3@MTA2!0.19!17.54!MTA2;;chr20:50808290..50808328,-!p1@ZFP64!0.19!15.72!ZFP64;;chr6:33168126..33168180,-!p2@RXRB!0.19!14.21!RXRB;;chr2:217277169..217277266,+!p1@SMARCAL1!0.19!13.91!SMARCAL1;;chr12:125052112..125052172,-!p2@NCOR2!0.19!12.10!NCOR2;;chr1:27022164..27022220,+!p2@ARID1A!0.19!9.68!ARID1A;;chr18:51750888..51750920,-!p3@MBD2!0.19!9.37!MBD2;;chr6:157100031..157100112,+!p2@ARID1B!0.19!6.95!ARID1B;;chr19:35264089..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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002577;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000158;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001987;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003124;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 42:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|rna_box=118
|rna_catalog_number=CA230-R10f
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=2637
|rna_od260/230=
|rna_od260/280=
|rna_position=G5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=118G5
|rna_weight_ug=10
|rnaseq_library_id=SRhi10008.ACTTGA
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=placental epithelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Cell Applications
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.32752610250962e-225!GO:0005737;cytoplasm;6.70297797908239e-180!GO:0043226;organelle;1.44762507493866e-179!GO:0043229;intracellular organelle;4.4469068377117e-179!GO:0043231;intracellular membrane-bound organelle;7.38972005782883e-173!GO:0043227;membrane-bound organelle;2.32917232307291e-172!GO:0044422;organelle part;1.80127493844817e-135!GO:0044446;intracellular organelle part;2.69821842719866e-134!GO:0044444;cytoplasmic part;2.89286894454918e-124!GO:0032991;macromolecular complex;1.44507612619818e-84!GO:0044238;primary metabolic process;8.33321351044192e-81!GO:0044237;cellular metabolic process;9.76834171749735e-80!GO:0005515;protein binding;2.24441037947113e-78!GO:0030529;ribonucleoprotein complex;1.84429941727313e-76!GO:0043170;macromolecule metabolic process;1.52728865202405e-72!GO:0005634;nucleus;6.07635102064903e-67!GO:0043233;organelle lumen;1.61562724873329e-62!GO:0031974;membrane-enclosed lumen;1.61562724873329e-62!GO:0005739;mitochondrion;8.16153281986577e-61!GO:0044428;nuclear part;7.29330431722524e-60!GO:0003723;RNA binding;6.2016258318523e-54!GO:0005840;ribosome;7.10718588923018e-50!GO:0006412;translation;1.89417754649152e-45!GO:0016043;cellular component organization and biogenesis;3.44928049477446e-45!GO:0019538;protein metabolic process;4.86490060175911e-45!GO:0031090;organelle membrane;1.35521640374514e-44!GO:0003735;structural constituent of ribosome;3.56004425917958e-44!GO:0043234;protein complex;4.8787742701188e-42!GO:0043283;biopolymer metabolic process;3.69943728919118e-41!GO:0044260;cellular macromolecule metabolic process;2.121622490446e-39!GO:0044429;mitochondrial part;2.29599401609162e-39!GO:0009058;biosynthetic process;4.52459273677872e-39!GO:0033279;ribosomal subunit;7.2720571731904e-39!GO:0044267;cellular protein metabolic process;2.533199947803e-38!GO:0006396;RNA processing;1.08782560335691e-37!GO:0043228;non-membrane-bound organelle;1.1910305335573e-37!GO:0043232;intracellular non-membrane-bound organelle;1.1910305335573e-37!GO:0044249;cellular biosynthetic process;1.21691903758673e-36!GO:0031981;nuclear lumen;1.62508269117352e-36!GO:0009059;macromolecule biosynthetic process;9.8668541072297e-36!GO:0033036;macromolecule localization;2.62421808403174e-35!GO:0031967;organelle envelope;9.7474183553059e-35!GO:0005829;cytosol;9.99314181932525e-35!GO:0031975;envelope;2.27480676115069e-34!GO:0006996;organelle organization and biogenesis;3.6952814909611e-34!GO:0015031;protein transport;4.32646080603364e-34!GO:0010467;gene expression;1.43366775174023e-33!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.64878296727852e-33!GO:0008104;protein localization;6.68753321129463e-33!GO:0045184;establishment of protein localization;2.40745401824065e-32!GO:0065003;macromolecular complex assembly;2.7715105431056e-32!GO:0016071;mRNA metabolic process;2.91306175669725e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.00681863810457e-29!GO:0022607;cellular component assembly;1.56360105317029e-29!GO:0006259;DNA metabolic process;2.51469391339709e-29!GO:0008380;RNA splicing;8.1603401764732e-28!GO:0046907;intracellular transport;2.06276175457092e-26!GO:0006397;mRNA processing;7.81119793403255e-26!GO:0005740;mitochondrial envelope;1.13190164382521e-25!GO:0019866;organelle inner membrane;1.8037394752133e-24!GO:0007049;cell cycle;1.98354424428281e-24!GO:0031966;mitochondrial membrane;3.39286595347797e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.84121528200967e-23!GO:0006886;intracellular protein transport;9.70271404285256e-23!GO:0005743;mitochondrial inner membrane;1.00972029938209e-22!GO:0005654;nucleoplasm;6.19219769899147e-22!GO:0044445;cytosolic part;7.43785939920148e-22!GO:0005681;spliceosome;6.74540425779772e-21!GO:0015934;large ribosomal subunit;2.76150404128836e-20!GO:0022402;cell cycle process;3.90116477724688e-20!GO:0006119;oxidative phosphorylation;7.41677860794654e-20!GO:0015935;small ribosomal subunit;1.05753226049874e-19!GO:0044455;mitochondrial membrane part;1.7158879255465e-18!GO:0005783;endoplasmic reticulum;2.62383249503951e-18!GO:0044451;nucleoplasm part;3.45581728316857e-18!GO:0000278;mitotic cell cycle;4.95993894634557e-18!GO:0012505;endomembrane system;9.47430615468137e-18!GO:0048770;pigment granule;2.56196397089056e-17!GO:0042470;melanosome;2.56196397089056e-17!GO:0003676;nucleic acid binding;3.44708525104504e-17!GO:0051649;establishment of cellular localization;4.59731260725138e-17!GO:0031980;mitochondrial lumen;6.45202119213266e-17!GO:0005759;mitochondrial matrix;6.45202119213266e-17!GO:0051641;cellular localization;6.94046832553964e-17!GO:0016874;ligase activity;9.49975136342285e-17!GO:0008134;transcription factor binding;2.89673789076082e-16!GO:0000166;nucleotide binding;5.40043970352198e-16!GO:0044432;endoplasmic reticulum part;6.35641230966906e-16!GO:0005746;mitochondrial respiratory chain;6.35641230966906e-16!GO:0016462;pyrophosphatase activity;8.48197360327877e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.48768008844966e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;1.09839837797136e-15!GO:0006457;protein folding;1.68624161968609e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.0068565962946e-15!GO:0051276;chromosome organization and biogenesis;4.05845170416428e-15!GO:0005730;nucleolus;7.13776585627813e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.53546931404536e-15!GO:0005694;chromosome;8.12702992898381e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.47107375102406e-14!GO:0017111;nucleoside-triphosphatase activity;1.61167176932299e-14!GO:0044427;chromosomal part;2.61106942842143e-14!GO:0051186;cofactor metabolic process;3.20350005035385e-14!GO:0022403;cell cycle phase;4.22238854335092e-14!GO:0022618;protein-RNA complex assembly;5.50737611580099e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.93019012728659e-14!GO:0050136;NADH dehydrogenase (quinone) activity;9.21706676831028e-14!GO:0003954;NADH dehydrogenase activity;9.21706676831028e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.21706676831028e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;9.69968955799817e-14!GO:0043285;biopolymer catabolic process;1.37043570068264e-13!GO:0006974;response to DNA damage stimulus;1.37677756235551e-13!GO:0016070;RNA metabolic process;1.83417922352854e-13!GO:0005794;Golgi apparatus;2.10586107421871e-13!GO:0006323;DNA packaging;6.63423714560879e-13!GO:0043412;biopolymer modification;6.75843679847783e-13!GO:0006512;ubiquitin cycle;7.05663486583238e-13!GO:0007067;mitosis;7.68163807316613e-13!GO:0000087;M phase of mitotic cell cycle;1.02830363722805e-12!GO:0005761;mitochondrial ribosome;1.37349372179228e-12!GO:0000313;organellar ribosome;1.37349372179228e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.62147759810136e-12!GO:0044265;cellular macromolecule catabolic process;2.11092393308346e-12!GO:0009057;macromolecule catabolic process;2.29850116450488e-12!GO:0006605;protein targeting;4.49341202432249e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.5487136712226e-12!GO:0042773;ATP synthesis coupled electron transport;4.5487136712226e-12!GO:0030964;NADH dehydrogenase complex (quinone);6.46887035362454e-12!GO:0045271;respiratory chain complex I;6.46887035362454e-12!GO:0005747;mitochondrial respiratory chain complex I;6.46887035362454e-12!GO:0000074;regulation of progression through cell cycle;9.90204207773183e-12!GO:0006464;protein modification process;1.15013513457015e-11!GO:0051726;regulation of cell cycle;1.1678765847867e-11!GO:0032553;ribonucleotide binding;1.30799764705044e-11!GO:0032555;purine ribonucleotide binding;1.30799764705044e-11!GO:0006281;DNA repair;1.75961313928719e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.04428181233756e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;3.97774287009709e-11!GO:0000375;RNA splicing, via transesterification reactions;3.97774287009709e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.97774287009709e-11!GO:0044248;cellular catabolic process;4.01825713544304e-11!GO:0006333;chromatin assembly or disassembly;4.79598238467338e-11!GO:0008135;translation factor activity, nucleic acid binding;5.12347920330638e-11!GO:0006732;coenzyme metabolic process;5.75845024011424e-11!GO:0030163;protein catabolic process;5.75845024011424e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.81109104373345e-11!GO:0017076;purine nucleotide binding;5.87221460904045e-11!GO:0005789;endoplasmic reticulum membrane;8.26606954853827e-11!GO:0051082;unfolded protein binding;1.09404374183271e-10!GO:0009719;response to endogenous stimulus;1.28611246464065e-10!GO:0006260;DNA replication;1.30549399798024e-10!GO:0000785;chromatin;1.32150870295305e-10!GO:0065004;protein-DNA complex assembly;1.51168520183112e-10!GO:0000279;M phase;1.67970904883149e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;2.29804427951187e-10!GO:0005524;ATP binding;2.47177009940038e-10!GO:0006511;ubiquitin-dependent protein catabolic process;2.50989033556323e-10!GO:0019941;modification-dependent protein catabolic process;3.36625309130963e-10!GO:0043632;modification-dependent macromolecule catabolic process;3.36625309130963e-10!GO:0032559;adenyl ribonucleotide binding;4.45995049689082e-10!GO:0044257;cellular protein catabolic process;4.47055461854966e-10!GO:0012501;programmed cell death;4.67023504141866e-10!GO:0042254;ribosome biogenesis and assembly;5.68051136263434e-10!GO:0005635;nuclear envelope;5.83521191083567e-10!GO:0048193;Golgi vesicle transport;5.8971063150842e-10!GO:0006461;protein complex assembly;5.8971063150842e-10!GO:0006915;apoptosis;6.66174554733156e-10!GO:0051301;cell division;6.66174554733156e-10!GO:0006334;nucleosome assembly;7.58403998993078e-10!GO:0003712;transcription cofactor activity;8.48865564285683e-10!GO:0043687;post-translational protein modification;1.06286371383699e-09!GO:0009055;electron carrier activity;1.15953076789842e-09!GO:0031497;chromatin assembly;1.66920623045405e-09!GO:0030554;adenyl nucleotide binding;2.74101463522055e-09!GO:0031965;nuclear membrane;4.26086950535825e-09!GO:0006399;tRNA metabolic process;4.27391002578417e-09!GO:0005793;ER-Golgi intermediate compartment;4.44634616461078e-09!GO:0016604;nuclear body;6.2165681821179e-09!GO:0008219;cell death;7.25990767711245e-09!GO:0016265;death;7.25990767711245e-09!GO:0006446;regulation of translational initiation;7.94852056382449e-09!GO:0016192;vesicle-mediated transport;8.96898888402564e-09!GO:0008639;small protein conjugating enzyme activity;1.30298062266691e-08!GO:0006413;translational initiation;1.43584898287981e-08!GO:0009259;ribonucleotide metabolic process;1.75191472439107e-08!GO:0003743;translation initiation factor activity;1.78376096494652e-08!GO:0008565;protein transporter activity;2.59325255599382e-08!GO:0004842;ubiquitin-protein ligase activity;2.82490443875263e-08!GO:0006913;nucleocytoplasmic transport;3.15000506310325e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.54642231782868e-08!GO:0044453;nuclear membrane part;3.70655734700595e-08!GO:0030532;small nuclear ribonucleoprotein complex;4.17570210810353e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.30273392476196e-08!GO:0009150;purine ribonucleotide metabolic process;4.89430477806701e-08!GO:0019787;small conjugating protein ligase activity;5.15288624776809e-08!GO:0051169;nuclear transport;5.57767507507721e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.00507873765567e-08!GO:0004812;aminoacyl-tRNA ligase activity;6.00507873765567e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.00507873765567e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.24608226983011e-08!GO:0006163;purine nucleotide metabolic process;7.1023868816327e-08!GO:0009060;aerobic respiration;8.30950431929185e-08!GO:0042623;ATPase activity, coupled;9.10704132150046e-08!GO:0005768;endosome;1.31518787699098e-07!GO:0048475;coated membrane;1.41544700510048e-07!GO:0030117;membrane coat;1.41544700510048e-07!GO:0005788;endoplasmic reticulum lumen;1.47711589799757e-07!GO:0009260;ribonucleotide biosynthetic process;1.74607101217221e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.75832245089832e-07!GO:0043038;amino acid activation;1.79002933239381e-07!GO:0006418;tRNA aminoacylation for protein translation;1.79002933239381e-07!GO:0043039;tRNA aminoacylation;1.79002933239381e-07!GO:0009056;catabolic process;1.82911440897081e-07!GO:0050794;regulation of cellular process;2.1376592273557e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.17093742350744e-07!GO:0016740;transferase activity;2.29389670734422e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.66068849687764e-07!GO:0009141;nucleoside triphosphate metabolic process;2.77032527077159e-07!GO:0030120;vesicle coat;2.88797401748517e-07!GO:0030662;coated vesicle membrane;2.88797401748517e-07!GO:0015986;ATP synthesis coupled proton transport;3.08592335858093e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.08592335858093e-07!GO:0016887;ATPase activity;3.20108020202433e-07!GO:0006164;purine nucleotide biosynthetic process;3.21797320596166e-07!GO:0051188;cofactor biosynthetic process;3.34769735313383e-07!GO:0016607;nuclear speck;3.78776807071719e-07!GO:0006366;transcription from RNA polymerase II promoter;4.1669735511817e-07!GO:0017038;protein import;4.17777285970037e-07!GO:0045333;cellular respiration;4.37076055536839e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.48332491541864e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.48332491541864e-07!GO:0007005;mitochondrion organization and biogenesis;4.86200216884085e-07!GO:0048523;negative regulation of cellular process;5.63005751792188e-07!GO:0016881;acid-amino acid ligase activity;5.72640502953754e-07!GO:0006364;rRNA processing;5.85913328066596e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.9663576311456e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.9663576311456e-07!GO:0016568;chromatin modification;9.17506200562632e-07!GO:0051329;interphase of mitotic cell cycle;1.01218115904681e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.05669692657203e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.05669692657203e-06!GO:0065002;intracellular protein transport across a membrane;1.14635553846263e-06!GO:0016072;rRNA metabolic process;1.29669769036435e-06!GO:0051325;interphase;1.61150936914648e-06!GO:0003697;single-stranded DNA binding;1.75195789691012e-06!GO:0009117;nucleotide metabolic process;2.04808936610371e-06!GO:0015630;microtubule cytoskeleton;2.30428635484138e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.32195721805807e-06!GO:0031252;leading edge;2.4460650599599e-06!GO:0005643;nuclear pore;2.75833780494202e-06!GO:0046034;ATP metabolic process;2.78591089149322e-06!GO:0043623;cellular protein complex assembly;3.06386698537605e-06!GO:0004386;helicase activity;3.5590778782324e-06!GO:0016564;transcription repressor activity;3.59909188455992e-06!GO:0016491;oxidoreductase activity;3.92602838891527e-06!GO:0031988;membrane-bound vesicle;4.20754456001394e-06!GO:0019829;cation-transporting ATPase activity;4.62326012839517e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.62563358512255e-06!GO:0006099;tricarboxylic acid cycle;5.10084385528769e-06!GO:0046356;acetyl-CoA catabolic process;5.10084385528769e-06!GO:0003924;GTPase activity;5.34691628710417e-06!GO:0003714;transcription corepressor activity;5.3904877868295e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.48476799067258e-06!GO:0008026;ATP-dependent helicase activity;5.49381693464245e-06!GO:0006754;ATP biosynthetic process;5.56657804925848e-06!GO:0006753;nucleoside phosphate metabolic process;5.56657804925848e-06!GO:0005667;transcription factor complex;6.9046566583746e-06!GO:0044431;Golgi apparatus part;7.64904392078409e-06!GO:0045259;proton-transporting ATP synthase complex;7.70502277061734e-06!GO:0016469;proton-transporting two-sector ATPase complex;8.47633819672904e-06!GO:0042981;regulation of apoptosis;1.04109768412399e-05!GO:0045786;negative regulation of progression through cell cycle;1.11065762687913e-05!GO:0031324;negative regulation of cellular metabolic process;1.13019692815976e-05!GO:0043067;regulation of programmed cell death;1.19641752482061e-05!GO:0006793;phosphorus metabolic process;1.26606272717931e-05!GO:0006796;phosphate metabolic process;1.26606272717931e-05!GO:0031982;vesicle;1.28236474142652e-05!GO:0006084;acetyl-CoA metabolic process;1.32079304326698e-05!GO:0048519;negative regulation of biological process;1.40908860360725e-05!GO:0032446;protein modification by small protein conjugation;1.43583057253568e-05!GO:0043566;structure-specific DNA binding;1.51565067238269e-05!GO:0031410;cytoplasmic vesicle;1.6206306633612e-05!GO:0006916;anti-apoptosis;1.75285886326422e-05!GO:0000786;nucleosome;1.75285886326422e-05!GO:0005773;vacuole;1.83003097590892e-05!GO:0051246;regulation of protein metabolic process;1.85037351321322e-05!GO:0005762;mitochondrial large ribosomal subunit;2.02063673486512e-05!GO:0000315;organellar large ribosomal subunit;2.02063673486512e-05!GO:0016567;protein ubiquitination;2.06074011053585e-05!GO:0008361;regulation of cell size;2.28265883712138e-05!GO:0016049;cell growth;2.34832871218119e-05!GO:0050657;nucleic acid transport;2.35896544215379e-05!GO:0051236;establishment of RNA localization;2.35896544215379e-05!GO:0050658;RNA transport;2.35896544215379e-05!GO:0006752;group transfer coenzyme metabolic process;2.50680942503047e-05!GO:0009109;coenzyme catabolic process;2.58110665864435e-05!GO:0046930;pore complex;2.6066108629211e-05!GO:0016853;isomerase activity;2.82485269427071e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.84982418021483e-05!GO:0005798;Golgi-associated vesicle;3.01252278843559e-05!GO:0044440;endosomal part;3.17922540626615e-05!GO:0010008;endosome membrane;3.17922540626615e-05!GO:0016310;phosphorylation;3.310340195811e-05!GO:0009108;coenzyme biosynthetic process;3.37318345589127e-05!GO:0006403;RNA localization;3.4463189906343e-05!GO:0019843;rRNA binding;3.87843220890885e-05!GO:0050789;regulation of biological process;4.00480899707267e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.14818394167401e-05!GO:0051187;cofactor catabolic process;4.31455243599287e-05!GO:0005819;spindle;4.5860197162602e-05!GO:0016563;transcription activator activity;4.63078470433676e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.73906035428932e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.86107105441535e-05!GO:0000245;spliceosome assembly;5.04934035353949e-05!GO:0043069;negative regulation of programmed cell death;5.17894765727852e-05!GO:0008654;phospholipid biosynthetic process;5.96424633913943e-05!GO:0001558;regulation of cell growth;6.17568914150148e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.04188355139946e-05!GO:0043066;negative regulation of apoptosis;7.53539070293379e-05!GO:0006091;generation of precursor metabolites and energy;8.58820561783809e-05!GO:0016859;cis-trans isomerase activity;9.01673458527657e-05!GO:0005905;coated pit;9.40188316423963e-05!GO:0003713;transcription coactivator activity;9.59101787298178e-05!GO:0015980;energy derivation by oxidation of organic compounds;0.000107858156320985!GO:0009892;negative regulation of metabolic process;0.000119774052281369!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000122532898429686!GO:0045454;cell redox homeostasis;0.000125713898110985!GO:0033116;ER-Golgi intermediate compartment membrane;0.000128633587390734!GO:0000151;ubiquitin ligase complex;0.00013778330405356!GO:0016779;nucleotidyltransferase activity;0.000138528378620967!GO:0016126;sterol biosynthetic process;0.000138859326210115!GO:0007010;cytoskeleton organization and biogenesis;0.000140495523439908!GO:0051170;nuclear import;0.000149580880089161!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000149580880089161!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000161408738626562!GO:0000323;lytic vacuole;0.000167035953060752!GO:0005764;lysosome;0.000167035953060752!GO:0019899;enzyme binding;0.000167668920042812!GO:0005770;late endosome;0.00017196481461415!GO:0030133;transport vesicle;0.000174146194434229!GO:0005813;centrosome;0.000177833153597798!GO:0030867;rough endoplasmic reticulum membrane;0.000181323076496049!GO:0030036;actin cytoskeleton organization and biogenesis;0.000193913660804317!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000208977942066697!GO:0006261;DNA-dependent DNA replication;0.000229113333137235!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000271318942755504!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000275128007779237!GO:0006606;protein import into nucleus;0.000281792571632596!GO:0006613;cotranslational protein targeting to membrane;0.000288944438480886!GO:0065009;regulation of a molecular function;0.000289550348625299!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000289710127754215!GO:0046474;glycerophospholipid biosynthetic process;0.000289710127754215!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.000301509926375225!GO:0004298;threonine endopeptidase activity;0.000310575770257117!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000347002437726633!GO:0005815;microtubule organizing center;0.000373742831018871!GO:0051427;hormone receptor binding;0.00037466148361035!GO:0003684;damaged DNA binding;0.000419631265343566!GO:0016787;hydrolase activity;0.000419631265343566!GO:0030118;clathrin coat;0.000419906688902022!GO:0005769;early endosome;0.00043476697455222!GO:0000139;Golgi membrane;0.00044581662248853!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000469262264979107!GO:0051028;mRNA transport;0.000484743867355736!GO:0008250;oligosaccharyl transferase complex;0.000484743867355736!GO:0003724;RNA helicase activity;0.000509326990677695!GO:0042802;identical protein binding;0.000512810092495088!GO:0044262;cellular carbohydrate metabolic process;0.000522837318885815!GO:0051789;response to protein stimulus;0.00054679077227232!GO:0006986;response to unfolded protein;0.00054679077227232!GO:0005791;rough endoplasmic reticulum;0.000589924927320819!GO:0008094;DNA-dependent ATPase activity;0.000597202549798018!GO:0005525;GTP binding;0.000613333181514696!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000674678050103593!GO:0005657;replication fork;0.000718403500776579!GO:0035257;nuclear hormone receptor binding;0.000747599463821672!GO:0000314;organellar small ribosomal subunit;0.00079565093609397!GO:0005763;mitochondrial small ribosomal subunit;0.00079565093609397!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000842789459169031!GO:0007051;spindle organization and biogenesis;0.000845386083087808!GO:0003899;DNA-directed RNA polymerase activity;0.000866779614386995!GO:0004576;oligosaccharyl transferase activity;0.00090347859074947!GO:0043488;regulation of mRNA stability;0.00092638493499212!GO:0043487;regulation of RNA stability;0.00092638493499212!GO:0016481;negative regulation of transcription;0.000932831820331305!GO:0040008;regulation of growth;0.000932831820331305!GO:0030132;clathrin coat of coated pit;0.000932831820331305!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000962053249918833!GO:0007264;small GTPase mediated signal transduction;0.000983283782929076!GO:0043681;protein import into mitochondrion;0.00100182423104127!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00107435340788986!GO:0030029;actin filament-based process;0.00107910098372335!GO:0051252;regulation of RNA metabolic process;0.00110856034175003!GO:0000775;chromosome, pericentric region;0.00115662921410282!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00115662921410282!GO:0001726;ruffle;0.0011682303050102!GO:0048522;positive regulation of cellular process;0.00119102659785466!GO:0030119;AP-type membrane coat adaptor complex;0.0012784142533251!GO:0005048;signal sequence binding;0.00128499308058798!GO:0051920;peroxiredoxin activity;0.00131469053015998!GO:0030027;lamellipodium;0.00139139564397728!GO:0006695;cholesterol biosynthetic process;0.0013932971148147!GO:0043021;ribonucleoprotein binding;0.00142737851285228!GO:0008092;cytoskeletal protein binding;0.00152581432629826!GO:0018196;peptidyl-asparagine modification;0.00155629380863355!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00155629380863355!GO:0006979;response to oxidative stress;0.00158498921870956!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00169886244123261!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00169886244123261!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00169886244123261!GO:0005885;Arp2/3 protein complex;0.00176720862065646!GO:0046489;phosphoinositide biosynthetic process;0.00179585402953018!GO:0019867;outer membrane;0.00179619767406406!GO:0030131;clathrin adaptor complex;0.00185463291145326!GO:0051168;nuclear export;0.0019455934589505!GO:0007243;protein kinase cascade;0.00195760527803553!GO:0007088;regulation of mitosis;0.00196421958731808!GO:0031968;organelle outer membrane;0.00206281816002746!GO:0030663;COPI coated vesicle membrane;0.00212364024121242!GO:0030126;COPI vesicle coat;0.00212364024121242!GO:0006650;glycerophospholipid metabolic process;0.00228217775236074!GO:0009165;nucleotide biosynthetic process;0.00233471175462407!GO:0007006;mitochondrial membrane organization and biogenesis;0.00234482328631104!GO:0006839;mitochondrial transport;0.0023488627517213!GO:0006414;translational elongation;0.00238847698667396!GO:0030176;integral to endoplasmic reticulum membrane;0.00243637242168878!GO:0019222;regulation of metabolic process;0.00252377403380329!GO:0008186;RNA-dependent ATPase activity;0.00287953303737199!GO:0048471;perinuclear region of cytoplasm;0.0029267680896683!GO:0000075;cell cycle checkpoint;0.00307447410958054!GO:0005684;U2-dependent spliceosome;0.0031522410576821!GO:0003682;chromatin binding;0.00315804142646604!GO:0008033;tRNA processing;0.00321460424678813!GO:0006402;mRNA catabolic process;0.00339850922891815!GO:0006612;protein targeting to membrane;0.00357161432256044!GO:0048487;beta-tubulin binding;0.0036469797903245!GO:0030659;cytoplasmic vesicle membrane;0.00375641196572397!GO:0032561;guanyl ribonucleotide binding;0.00400447944040683!GO:0019001;guanyl nucleotide binding;0.00400447944040683!GO:0005741;mitochondrial outer membrane;0.00401766433142797!GO:0005852;eukaryotic translation initiation factor 3 complex;0.004335297531853!GO:0006626;protein targeting to mitochondrion;0.00440901086536599!GO:0006289;nucleotide-excision repair;0.00440901086536599!GO:0017166;vinculin binding;0.00440901086536599!GO:0032508;DNA duplex unwinding;0.0046078309395229!GO:0032392;DNA geometric change;0.0046078309395229!GO:0030658;transport vesicle membrane;0.00466587153215516!GO:0043284;biopolymer biosynthetic process;0.00520929493152!GO:0030137;COPI-coated vesicle;0.00535743491871269!GO:0003729;mRNA binding;0.00549440459579337!GO:0016363;nuclear matrix;0.00575014656842252!GO:0006082;organic acid metabolic process;0.00581609985093686!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00623314044238856!GO:0008610;lipid biosynthetic process;0.00628597748031025!GO:0019752;carboxylic acid metabolic process;0.00657770860143631!GO:0007050;cell cycle arrest;0.00690543826269962!GO:0004004;ATP-dependent RNA helicase activity;0.00709670037999793!GO:0051101;regulation of DNA binding;0.00742635184284294!GO:0006268;DNA unwinding during replication;0.00749025116976635!GO:0004177;aminopeptidase activity;0.00779726666907552!GO:0005874;microtubule;0.00779726666907552!GO:0007040;lysosome organization and biogenesis;0.0078918454860625!GO:0006818;hydrogen transport;0.00801586544447797!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00831685397546178!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00831685397546178!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00839707120835676!GO:0008022;protein C-terminus binding;0.00883095899996382!GO:0050790;regulation of catalytic activity;0.00904069846848617!GO:0030384;phosphoinositide metabolic process;0.00915232761095803!GO:0006509;membrane protein ectodomain proteolysis;0.00939452627847105!GO:0033619;membrane protein proteolysis;0.00939452627847105!GO:0016741;transferase activity, transferring one-carbon groups;0.00945284787667559!GO:0000049;tRNA binding;0.00960131583373052!GO:0008168;methyltransferase activity;0.00967800799004357!GO:0007265;Ras protein signal transduction;0.00967811392582458!GO:0006740;NADPH regeneration;0.00967811392582458!GO:0006098;pentose-phosphate shunt;0.00967811392582458!GO:0003690;double-stranded DNA binding;0.00969433531693717!GO:0000059;protein import into nucleus, docking;0.00971419966010606!GO:0003711;transcription elongation regulator activity;0.0100105815745427!GO:0044433;cytoplasmic vesicle part;0.0101027835459326!GO:0006284;base-excision repair;0.0102170532185128!GO:0030125;clathrin vesicle coat;0.0102779719416896!GO:0030665;clathrin coated vesicle membrane;0.0102779719416896!GO:0030660;Golgi-associated vesicle membrane;0.0105367735536883!GO:0045936;negative regulation of phosphate metabolic process;0.0105807775333394!GO:0030145;manganese ion binding;0.0106547738419716!GO:0015992;proton transport;0.0106865684058363!GO:0008637;apoptotic mitochondrial changes;0.0107134327948065!GO:0040029;regulation of gene expression, epigenetic;0.0107936171933098!GO:0006401;RNA catabolic process;0.0109578013159305!GO:0031543;peptidyl-proline dioxygenase activity;0.0113327958607341!GO:0005637;nuclear inner membrane;0.0114272996759824!GO:0015631;tubulin binding;0.0114501812111199!GO:0007033;vacuole organization and biogenesis;0.0117380151714726!GO:0007346;regulation of progression through mitotic cell cycle;0.0118924813996658!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0124204242505216!GO:0006779;porphyrin biosynthetic process;0.0124345282770308!GO:0033014;tetrapyrrole biosynthetic process;0.0124345282770308!GO:0003678;DNA helicase activity;0.0125146004391857!GO:0000082;G1/S transition of mitotic cell cycle;0.0128363744880765!GO:0006506;GPI anchor biosynthetic process;0.0131002511301728!GO:0016408;C-acyltransferase activity;0.0137994387044173!GO:0030031;cell projection biogenesis;0.0138957048447214!GO:0051098;regulation of binding;0.0141798524452976!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0147294973360151!GO:0005869;dynactin complex;0.0147596827914792!GO:0001836;release of cytochrome c from mitochondria;0.0148014109654185!GO:0006778;porphyrin metabolic process;0.014958666081409!GO:0033013;tetrapyrrole metabolic process;0.014958666081409!GO:0045892;negative regulation of transcription, DNA-dependent;0.0152875267581359!GO:0019798;procollagen-proline dioxygenase activity;0.0154164736287359!GO:0005583;fibrillar collagen;0.015474218748864!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0158010159918598!GO:0015002;heme-copper terminal oxidase activity;0.0158010159918598!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0158010159918598!GO:0004129;cytochrome-c oxidase activity;0.0158010159918598!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0158345981099979!GO:0006383;transcription from RNA polymerase III promoter;0.015841926913951!GO:0030057;desmosome;0.0159062054033953!GO:0016044;membrane organization and biogenesis;0.0162144103481389!GO:0051287;NAD binding;0.0162144103481389!GO:0006066;alcohol metabolic process;0.0168110658347531!GO:0043154;negative regulation of caspase activity;0.0169434502532463!GO:0016125;sterol metabolic process;0.0172484687691586!GO:0006405;RNA export from nucleus;0.0172484687691586!GO:0046467;membrane lipid biosynthetic process;0.0175230537924613!GO:0006520;amino acid metabolic process;0.0175360098176998!GO:0065007;biological regulation;0.0175360098176998!GO:0031902;late endosome membrane;0.0175389981947629!GO:0008629;induction of apoptosis by intracellular signals;0.0177352094289769!GO:0045893;positive regulation of transcription, DNA-dependent;0.0180288520143325!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.018166895936992!GO:0019904;protein domain specific binding;0.0183258833171428!GO:0006595;polyamine metabolic process;0.0188823928366273!GO:0003746;translation elongation factor activity;0.0190195083146363!GO:0006505;GPI anchor metabolic process;0.0197727471237695!GO:0030134;ER to Golgi transport vesicle;0.0200052124627828!GO:0031529;ruffle organization and biogenesis;0.020415943220995!GO:0008286;insulin receptor signaling pathway;0.0204965838638876!GO:0030880;RNA polymerase complex;0.0205071937480603!GO:0031124;mRNA 3'-end processing;0.0209271059652958!GO:0006891;intra-Golgi vesicle-mediated transport;0.0209965236613133!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0212161203231373!GO:0008139;nuclear localization sequence binding;0.0213192609342683!GO:0048518;positive regulation of biological process;0.0213284743789571!GO:0048500;signal recognition particle;0.0215582117574905!GO:0035035;histone acetyltransferase binding;0.0216882645972164!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0223803208238688!GO:0035258;steroid hormone receptor binding;0.0223901510538624!GO:0006338;chromatin remodeling;0.0233999623131245!GO:0004518;nuclease activity;0.0235394273120538!GO:0045941;positive regulation of transcription;0.0239077779395403!GO:0032507;maintenance of cellular protein localization;0.0242603565828756!GO:0004527;exonuclease activity;0.0242871507097024!GO:0012506;vesicle membrane;0.024404229554578!GO:0005832;chaperonin-containing T-complex;0.0247133584157227!GO:0030521;androgen receptor signaling pathway;0.025095000895025!GO:0031072;heat shock protein binding;0.0250984022169662!GO:0044452;nucleolar part;0.02517853949497!GO:0046426;negative regulation of JAK-STAT cascade;0.0257641764806181!GO:0042326;negative regulation of phosphorylation;0.025783147190516!GO:0048468;cell development;0.0259811470588632!GO:0051656;establishment of organelle localization;0.026079932165431!GO:0006354;RNA elongation;0.0262447997332024!GO:0045806;negative regulation of endocytosis;0.0263271594850991!GO:0008632;apoptotic program;0.0264317379500767!GO:0006352;transcription initiation;0.0265891614938038!GO:0006807;nitrogen compound metabolic process;0.0275035978182921!GO:0005520;insulin-like growth factor binding;0.0277654675326454!GO:0051338;regulation of transferase activity;0.0282537867598129!GO:0008180;signalosome;0.0287775733632235!GO:0030127;COPII vesicle coat;0.0293692601740783!GO:0012507;ER to Golgi transport vesicle membrane;0.0293692601740783!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0295378425250459!GO:0006497;protein amino acid lipidation;0.0301473736944431!GO:0043022;ribosome binding;0.030185221695812!GO:0000030;mannosyltransferase activity;0.0301968376602086!GO:0001527;microfibril;0.0303018285259072!GO:0007052;mitotic spindle organization and biogenesis;0.030651055121356!GO:0051235;maintenance of localization;0.0312480552659146!GO:0046483;heterocycle metabolic process;0.0312480552659146!GO:0006739;NADP metabolic process;0.031322182476233!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.031322182476233!GO:0015399;primary active transmembrane transporter activity;0.031322182476233!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0316131291489976!GO:0010257;NADH dehydrogenase complex assembly;0.0316131291489976!GO:0033108;mitochondrial respiratory chain complex assembly;0.0316131291489976!GO:0005774;vacuolar membrane;0.032545340911396!GO:0016584;nucleosome positioning;0.0327527050669792!GO:0000123;histone acetyltransferase complex;0.0327527050669792!GO:0042158;lipoprotein biosynthetic process;0.0328701646821805!GO:0006458;'de novo' protein folding;0.0329501624733755!GO:0051084;'de novo' posttranslational protein folding;0.0329501624733755!GO:0016407;acetyltransferase activity;0.0332837728713159!GO:0016301;kinase activity;0.0339854453051727!GO:0005862;muscle thin filament tropomyosin;0.0342952738731829!GO:0043414;biopolymer methylation;0.0346743650160879!GO:0008312;7S RNA binding;0.0347402996213158!GO:0050811;GABA receptor binding;0.0356696732692236!GO:0031418;L-ascorbic acid binding;0.0357637244983978!GO:0050662;coenzyme binding;0.0359089840178394!GO:0006611;protein export from nucleus;0.0359089840178394!GO:0006376;mRNA splice site selection;0.0360739834927904!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0360739834927904!GO:0022890;inorganic cation transmembrane transporter activity;0.0367925067952128!GO:0006644;phospholipid metabolic process;0.0367925067952128!GO:0051128;regulation of cellular component organization and biogenesis;0.036808671572416!GO:0051087;chaperone binding;0.0371819521993198!GO:0033673;negative regulation of kinase activity;0.0372425552627164!GO:0006469;negative regulation of protein kinase activity;0.0372425552627164!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0373137494394985!GO:0009967;positive regulation of signal transduction;0.0375318231158468!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.037818631140833!GO:0000428;DNA-directed RNA polymerase complex;0.037818631140833!GO:0006767;water-soluble vitamin metabolic process;0.0394449339969442!GO:0000776;kinetochore;0.0398748993015019!GO:0005856;cytoskeleton;0.0398768863823664!GO:0006783;heme biosynthetic process;0.0398768863823664!GO:0030128;clathrin coat of endocytic vesicle;0.0398768863823664!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0398768863823664!GO:0030122;AP-2 adaptor complex;0.0398768863823664!GO:0009308;amine metabolic process;0.040099336575419!GO:0051059;NF-kappaB binding;0.040099336575419!GO:0000086;G2/M transition of mitotic cell cycle;0.0401394475220894!GO:0004860;protein kinase inhibitor activity;0.0403260771503261!GO:0016197;endosome transport;0.0403609734881695!GO:0045737;positive regulation of cyclin-dependent protein kinase activity;0.0406402970072281!GO:0031323;regulation of cellular metabolic process;0.0409424839547116!GO:0051348;negative regulation of transferase activity;0.0410198212301705!GO:0006643;membrane lipid metabolic process;0.0410198212301705!GO:0043065;positive regulation of apoptosis;0.0410844057469986!GO:0016251;general RNA polymerase II transcription factor activity;0.0417493118344377!GO:0000096;sulfur amino acid metabolic process;0.0421860347807287!GO:0043189;H4/H2A histone acetyltransferase complex;0.0422763038412628!GO:0009303;rRNA transcription;0.0422834937645452!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0424634490202261!GO:0000209;protein polyubiquitination;0.0424872579961472!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0427529405558086!GO:0045047;protein targeting to ER;0.0427529405558086!GO:0000118;histone deacetylase complex;0.0427529405558086!GO:0006733;oxidoreduction coenzyme metabolic process;0.0427539555085351!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0433550588495462!GO:0006519;amino acid and derivative metabolic process;0.0435600463805761!GO:0008652;amino acid biosynthetic process;0.0441408475949157!GO:0042168;heme metabolic process;0.044782127940471!GO:0045334;clathrin-coated endocytic vesicle;0.044782127940471!GO:0043549;regulation of kinase activity;0.0448669544443786!GO:0005925;focal adhesion;0.0450122972925035!GO:0000792;heterochromatin;0.0450939927643455!GO:0008538;proteasome activator activity;0.0451757244386229!GO:0005876;spindle microtubule;0.0452450637402723!GO:0043068;positive regulation of programmed cell death;0.0454148651227875!GO:0003756;protein disulfide isomerase activity;0.0461972693217699!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0461972693217699!GO:0051651;maintenance of cellular localization;0.0464031051792271!GO:0005092;GDP-dissociation inhibitor activity;0.0464527096329481!GO:0030911;TPR domain binding;0.0467458189426694!GO:0050178;phenylpyruvate tautomerase activity;0.0467776487033377!GO:0006378;mRNA polyadenylation;0.0469049586668266!GO:0048144;fibroblast proliferation;0.047119360642242!GO:0048145;regulation of fibroblast proliferation;0.047119360642242!GO:0008426;protein kinase C inhibitor activity;0.0471554635496816!GO:0004674;protein serine/threonine kinase activity;0.0477913731174176!GO:0005581;collagen;0.0481540641730869!GO:0006302;double-strand break repair;0.0488746543699608!GO:0046966;thyroid hormone receptor binding;0.0489032648139045!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.048982712420437!GO:0051052;regulation of DNA metabolic process;0.048982712420437!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0494569618701953!GO:0004364;glutathione transferase activity;0.0495197298849167
|sample_id=11427
|sample_note=
|sample_sex=unknown
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=placenta
|top_motifs=PPARG:1.93393490652;XCPE1{core}:1.90928801082;ZNF148:1.73132820066;HOX{A5,B5}:1.67899270537;GLI1..3:1.65084492649;TP53:1.63293391629;GCM1,2:1.57740160343;ZIC1..3:1.5654309092;PAX5:1.55836314945;TFAP2{A,C}:1.52986420773;ZNF423:1.38690428274;TBP:1.36628093946;ESR1:1.27795907984;ZNF384:1.26871866666;TEAD1:1.26431185486;SP1:1.20136426963;RXR{A,B,G}:1.18074171227;RXRA_VDR{dimer}:1.17339010785;MAZ:1.13857973315;AR:1.04267815344;TFAP4:1.00799025091;NKX2-3_NKX2-5:0.937482935643;NKX2-1,4:0.931530425073;SPZ1:0.926256413136;TBX4,5:0.903670764053;EBF1:0.888286032654;SNAI1..3:0.886026935973;HMX1:0.878434135125;TFCP2:0.873672833819;HAND1,2:0.871209462353;FOXM1:0.869398158157;ZNF238:0.828614932393;UFEwm:0.800095004823;RORA:0.761130308023;GTF2A1,2:0.75474283757;GFI1:0.749158246521;IKZF1:0.724827190699;NFY{A,B,C}:0.71164518132;EP300:0.685314308957;NR3C1:0.671880705541;EN1,2:0.666669803522;ONECUT1,2:0.661140969583;MTF1:0.651414362695;KLF4:0.609614076585;HIC1:0.558519768649;PAX1,9:0.554607914719;E2F1..5:0.511874406012;ZEB1:0.510338703093;SOX17:0.497829537701;YY1:0.491686063558;RREB1:0.479616848557;POU2F1..3:0.452487531044;HES1:0.445193457114;PATZ1:0.392847412097;NKX2-2,8:0.390982567883;PBX1:0.389678607711;FOS_FOS{B,L1}_JUN{B,D}:0.337576420134;GTF2I:0.337421263686;TLX1..3_NFIC{dimer}:0.326117754644;ALX4:0.297386764439;BACH2:0.263930329731;SOX{8,9,10}:0.26069142372;FOXL1:0.245341806504;ZNF143:0.236063893684;ZBTB6:0.223926507603;HLF:0.218791959041;TFAP2B:0.207124994374;HIF1A:0.206909795483;XBP1:0.185268282954;TAL1_TCF{3,4,12}:0.165067364223;GZF1:0.155987925024;TOPORS:0.144177651168;TFDP1:0.136972116228;NR6A1:0.124400473388;PAX8:0.0914828643411;STAT5{A,B}:0.0884358453732;LEF1_TCF7_TCF7L1,2:0.0753071409637;POU3F1..4:0.0686806433835;bHLH_family:0.0663022108157;LHX3,4:0.0619911846921;HOX{A4,D4}:0.0576503062281;NR5A1,2:0.0399493817778;SOX5:0.0135599823365;AIRE:-0.0363454936718;NANOG{mouse}:-0.0759407695371;FOSL2:-0.0880678308746;ELK1,4_GABP{A,B1}:-0.0993442427177;REST:-0.101405680659;ATF6:-0.103065280194;NFE2:-0.129468009418;HNF4A_NR2F1,2:-0.136951521505;HNF1A:-0.153237338697;ESRRA:-0.173775349896;ARID5B:-0.194934417765;MED-1{core}:-0.205608298519;MZF1:-0.247579650418;MYB:-0.250372256846;HOXA9_MEIS1:-0.265659636322;NFIL3:-0.26725791305;HOX{A6,A7,B6,B7}:-0.267267930962;JUN:-0.280821969325;POU6F1:-0.282561033552;CDC5L:-0.292788265817;SMAD1..7,9:-0.294803438294;STAT1,3:-0.295049076666;NFE2L2:-0.295401767505;POU1F1:-0.298457355795;CEBPA,B_DDIT3:-0.308813642257;ATF2:-0.318094371195;SRF:-0.32363779077;NHLH1,2:-0.341434371843;RUNX1..3:-0.346870974533;MYBL2:-0.348340382746;PRRX1,2:-0.352166515767;NFKB1_REL_RELA:-0.353924185606;HSF1,2:-0.361897260828;ADNP_IRX_SIX_ZHX:-0.371244661245;GATA6:-0.381088803694;FOXQ1:-0.394805863252;MYOD1:-0.406622948515;GFI1B:-0.420911485923;EGR1..3:-0.423109801855;T:-0.477050020891;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.500415586836;RFX1:-0.515520921825;ATF4:-0.563926461001;NRF1:-0.581420223655;OCT4_SOX2{dimer}:-0.600895291633;MEF2{A,B,C,D}:-0.603124362825;MTE{core}:-0.619001500246;SOX2:-0.622735826173;FOXO1,3,4:-0.62803681864;PAX4:-0.629948768023;DBP:-0.697902832949;NKX3-2:-0.716484348178;PAX3,7:-0.718407556174;BREu{core}:-0.719836692664;PAX2:-0.720833744509;HMGA1,2:-0.738787642681;SPIB:-0.741429618521;RBPJ:-0.742015059177;ETS1,2:-0.745341421828;NFATC1..3:-0.754032274944;MAFB:-0.755341175907;ELF1,2,4:-0.756668138111;PRDM1:-0.757897913152;BPTF:-0.771558688044;LMO2:-0.775397989612;MYFfamily:-0.778815118372;STAT2,4,6:-0.801246655588;SPI1:-0.808196426341;SREBF1,2:-0.825147164107;CREB1:-0.843942598537;NR1H4:-0.863829345112;PITX1..3:-0.904181083115;CUX2:-0.93470817613;NKX3-1:-0.942773821195;FOX{F1,F2,J1}:-0.97240491952;TLX2:-0.993557507158;EVI1:-1.03279807611;FOXA2:-1.04003447293;NANOG:-1.05967110376;ALX1:-1.07611711488;PAX6:-1.07683521695;GATA4:-1.08533267966;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.15713918001;AHR_ARNT_ARNT2:-1.15891735791;DMAP1_NCOR{1,2}_SMARC:-1.16982835708;ZFP161:-1.17316597497;FOXN1:-1.17838078888;IRF7:-1.2061494288;ATF5_CREB3:-1.20796044623;IRF1,2:-1.21323784361;POU5F1:-1.22022971916;FOX{D1,D2}:-1.23644323069;TEF:-1.23716715898;NFE2L1:-1.27279462876;FOXP3:-1.27372316009;FOX{I1,J2}:-1.27758659401;CRX:-1.28267823459;NFIX:-1.30430129509;FOXD3:-1.31561590032;TGIF1:-1.32322135391;VSX1,2:-1.46404649777;RFX2..5_RFXANK_RFXAP:-1.46574137666;CDX1,2,4:-1.53865327074;FOXP1:-1.55026172149;PDX1:-1.76901561735;IKZF2:-1.99365917592;NKX6-1,2:-2.02902150855;ZBTB16:-2.26864875786;HBP1_HMGB_SSRP1_UBTF:-2.72336102483
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11427-118G5;search_select_hide=table117:FF:11427-118G5
}}
}}

Latest revision as of 18:00, 4 June 2020

Name:Placental Epithelial Cells, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12037
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueplacenta
dev stageNA
sexunknown
ageNA
cell typeplacental epithelial cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number2637
catalog numberCA230-R10f
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004672
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12037 CAGE DRX008406 DRR009278
Accession ID Hg19

Library idBAMCTSS
CNhs12037 DRZ000703 DRZ002088
Accession ID Hg38

Library idBAMCTSS
CNhs12037 DRZ012053 DRZ013438
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004672
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10008.ACTTGA sRNA-Seq DRX037114 DRR041480
Accession ID Hg19

Library idBAMCTSS
SRhi10008.ACTTGA DRZ007122


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0942
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.119
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.449
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes1.231
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.297
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.454
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.115
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.173
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.4
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.441
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.115
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.571
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue1.223
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.743
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.115
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0952
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.115
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.492
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.0718
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.425
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.743
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.169
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.665
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0.115
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.693
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12037

Jaspar motifP-value
MA0002.20.0944
MA0003.10.339
MA0004.10.944
MA0006.10.0993
MA0007.10.0205
MA0009.10.611
MA0014.10.589
MA0017.10.735
MA0018.20.0146
MA0019.10.0381
MA0024.10.13
MA0025.10.706
MA0027.10.402
MA0028.10.932
MA0029.10.197
MA0030.10.0951
MA0031.10.0686
MA0035.20.961
MA0038.10.00942
MA0039.20.0595
MA0040.10.701
MA0041.10.538
MA0042.10.784
MA0043.10.00664
MA0046.10.808
MA0047.20.352
MA0048.10.501
MA0050.17.24438e-8
MA0051.12.17634e-6
MA0052.10.781
MA0055.10.00467
MA0057.10.521
MA0058.10.636
MA0059.10.883
MA0060.19.90304e-5
MA0061.10.172
MA0062.20.0378
MA0065.20.219
MA0066.10.396
MA0067.10.00777
MA0068.10.985
MA0069.10.741
MA0070.10.0266
MA0071.10.871
MA0072.10.778
MA0073.10.631
MA0074.10.441
MA0076.10.347
MA0077.10.681
MA0078.10.867
MA0079.20.261
MA0080.26.89737e-10
MA0081.10.00488
MA0083.10.492
MA0084.10.966
MA0087.10.473
MA0088.10.953
MA0090.12.68668e-4
MA0091.10.271
MA0092.10.565
MA0093.10.889
MA0099.20.266
MA0100.10.213
MA0101.10.0147
MA0102.20.0162
MA0103.10.175
MA0104.20.254
MA0105.10.613
MA0106.10.113
MA0107.10.0104
MA0108.27.28833e-7
MA0111.10.574
MA0112.20.129
MA0113.10.0072
MA0114.10.824
MA0115.10.306
MA0116.10.569
MA0117.10.349
MA0119.10.974
MA0122.10.91
MA0124.10.902
MA0125.10.452
MA0131.10.426
MA0135.10.109
MA0136.11.92015e-9
MA0137.20.203
MA0138.20.248
MA0139.10.993
MA0140.10.419
MA0141.10.724
MA0142.10.577
MA0143.10.788
MA0144.10.957
MA0145.10.272
MA0146.10.019
MA0147.10.314
MA0148.10.371
MA0149.10.613
MA0150.10.0335
MA0152.10.81
MA0153.10.525
MA0154.10.391
MA0155.10.12
MA0156.18.78822e-6
MA0157.10.022
MA0159.10.558
MA0160.10.554
MA0162.10.0666
MA0163.10.252
MA0164.10.544
MA0258.10.487
MA0259.10.412



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12037

Novel motifP-value
10.208
100.3
1000.238
1010.108
1020.509
1030.908
1040.931
1050.531
1060.181
1070.251
1080.396
1090.0214
110.605
1100.222
1110.391
1120.689
1130.0836
1140.585
1150.0794
1160.182
1170.536
1180.395
1190.939
120.794
1200.0871
1210.232
1220.507
1230.00447
1240.0755
1250.247
1260.428
1270.979
1280.988
1290.689
130.27
1300.0898
1310.0294
1320.437
1330.377
1340.121
1350.93
1360.0478
1370.0185
1380.171
1390.168
140.808
1400.557
1410.984
1420.259
1430.633
1440.887
1450.836
1460.233
1470.302
1480.0123
1490.274
150.314
1500.263
1510.429
1520.0463
1530.0442
1540.254
1550.304
1560.285
1570.594
1580.528
1590.723
160.0973
1600.0751
1610.0936
1620.27
1630.895
1640.368
1650.711
1660.802
1670.12
1680.79
1690.0891
170.188
180.787
190.288
20.0739
200.847
210.925
220.0736
230.858
240.711
250.559
260.42
270.558
280.474
290.304
30.621
300.063
310.481
325.65071e-9
330.362
340.359
350.16
360.278
370.589
380.898
390.318
40.747
400.00839
410.341
420.357
430.951
440.558
450.183
460.902
470.834
480.548
490.342
50.152
500.491
510.461
520.547
530.284
540.575
550.373
560.527
570.764
580.259
590.0592
60.739
600.994
610.782
620.153
630.991
640.351
650.499
660.531
670.732
680.787
690.0147
70.989
700.518
710.602
720.728
730.028
740.0292
750.604
760.159
770.00495
780.938
790.0113
80.97
800.78
810.19
820.885
830.843
840.287
850.986
860.622
870.159
880.276
890.0996
90.338
900.0166
910.586
920.247
930.764
940.557
950.0961
960.218
970.484
980.823
990.0161



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12037


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000349 (extraembryonic cell)
0000255 (eukaryotic cell)
0002577 (placental epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001987 (placenta)
0005156 (reproductive structure)
0004119 (endoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000478 (extraembryonic structure)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000136 (human placental epithelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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