FF:11459-119B1: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (25 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005970 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008457;DRR009329;DRZ000754;DRZ002139;DRZ012104;DRZ013489 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001134,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002036,UBERON:0002385,UBERON:0010317,UBERON:0001015,UBERON:0002204,UBERON:0000383 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000211,CL:0000255,CL:0000188 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000162 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor6.CNhs12060.11459-119B1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor6.CNhs12060.11459-119B1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor6.CNhs12060.11459-119B1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor6.CNhs12060.11459-119B1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Skeletal%2520Muscle%2520Cells%252c%2520donor6.CNhs12060.11459-119B1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11459-119B1 | |id=FF:11459-119B1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000162 | ||
|is_obsolete= | |||
|library_id=CNhs12060 | |||
|library_id_phase_based=2:CNhs12060 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11459 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11459 | |||
|name=Skeletal Muscle Cells, donor6 | |name=Skeletal Muscle Cells, donor6 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12060,LSID838,release011,COMPLETED | |profile_hcage=CNhs12060,LSID838,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.052869706502812,0,0,0.795030732710736,0,-0.104238141283076,0,-0.277362132193514,0.0408660306198036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31350192176769,0,0.095354375703341,0,0,0,0.163785270913738,0,0,-0.0272171767732378,0,0,0,0,0,0,0,0,0,0,0.150298798479565,0,-0.0225053968610167,0.0560798888033103,0,0,0,0,0,0,0,0.0038249232888208,0,0,0,0.105739413005624,0,0.00889656275587014,0.105739413005624,-0.0409124724392948,0,0,0.0933651241935852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0560798888033103,0,0,0,0,0,0.0334729289208159,0.052869706502812,0,0,-0.0289728720842894,-0.0645320381866025,0,0.190708751406682,0,0.0560798888033103,0.00770406176791805,-0.085607494298083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0212241946826785,0,0,0,-0.125263300205101,-0.514972836325234,0,0,0.0281711669255181,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.00770406176791805,0,0.0560798888033103,0.0560798888033103,0,0.0560798888033103,0.105739413005624,0,0.0560798888033103,0.190708751406682,0,0,-0.0195022086379691,0,0.270097738232394,-0.143515142523472,0,0,0.335150217375441,0,0.0560798888033103,0,0,0,0,0,0,0,0.0221789315270003,0,0.00566733721399539,0,0,0.0560798888033103,0,0.0627845397833555,0.0708064066297022,0,-0.099108661909727,-0.0683442610773682,0,0,0,0,-0.122016587128171,0,-0.0151400707881162,0.107988583083265,0.0948148245561912,0.0653377212590476,-0.055712496781182,0,0,0,0.0203510020046049,0.171191124370615,0,0,-0.0466304525120914,0.0715904923924985,0,0,0.0757803505644825,0,-0.0695575722303228,0.053813041401376,0,0.0127166052704278,0,0,0,0,0,0,0,0,0,0,0,0.109214573005173,-0.0993119300313735,-0.00237003643592335,0,0,0,-0.435898862901175,0,0.0560798888033103,0.587296761464557,0.302226338360604,-0.0378525119307865,-0.110383236895687,0,0.121517552039332,0.0669398707979358,-0.292345997279334,-0.0289728720842894,0.114341317810657,0.103349009468685,0.121343339274158,-0.0105229530869603,0.140233157372243,-0.00624877280996195,0.0486550005676325,0.017389229981282,0.182702404134592,-0.189282062252767,0,0,0.0560798888033103,-0.05459512081038,0,0,-0.339815915997209,-0.0261280378767558,-0.21008519316251,-0.0910923428514389,-0.00381042508085017,0.336210480085954,0.0662068845489537,-0.229759786248999,0.031154458627832,0.231217455755198,0.00153275747012638,0.0560798888033103,-0.0340242831586827,-0.0781200399679156,-0.124691100326086,-0.0102620722579163,0,-0.293268710404299,-0.0683442610773682,0,0.147277389872561,0.152853086387405,0,0,-0.0728970089650967,0,0,0.0946974315441427,0,0.0560798888033103,0.0973596748160386,-0.311815476382571,-0.00517889490794943,0,-0.0894023410637995,0.0154436037459169,0.0181589393441316,0,-0.182723666616889,0.0446988539492879,-0.00474342334275968,-0.0325268824057798,0,0.0323436304276096,0.152438567704297,-0.0445363330551991,-0.129064076373205,-0.0584468268118252,-0.14001264018555,-0.102816550829563,-0.00663988473044164,0.123149372431543,0.0148033066649444,0.417753389431028,0,-0.0178201526952851,-0.233602093003119,-0.0816265872240602,0.107080189357156,0.0996227738729743,-0.0606968325938697,0,-0.0935395272704034,0,-0.0394226598455428,0.170114914953809,-0.0889387755273152,0.143774193577248,0,-0.0495589453813206,-0.637832139294409,0,0,0,0.0560798888033103,0.142963645683893,0.097334766198153,-0.108461084223152,0.0975478336296759,0,-0.0913481603415504,0,0,-0.156782527922893,-0.0851772392848237,0,-0.303078480211717,-0.232924276685287,-0.3424728740135,-0.115971073434934,0,0,-0.0114168064152573,0,0.227676666647595,-0.344184896636235,0.0710238906551601,0.498468779247374,0.790510052649245,0.0280399444016552,0.117603149839983,0,0,-0.121447877161865,0,0.210686231070461,0,0,-0.0793775216557001,0.111048553657463,0,0.0280399444016552,0,-0.0071263717937095,0.0206670575351424,0,0,0,0,0,0,-0.080003430080339,0.131958120079172,0,0.105739413005624,0,0,0,0,0,0,-0.0238033223692126,0.293330729018533,0.133907705346417,0.0411804759715525,0.0676913357302619,0,0,0,0,0.0460197646283204,0.090094166923809,0,0.0588460449090504,0,0,0,0,-0.0300611009859011,0,0,0,0.052869706502812,-0.057730457053664,-0.215030536878596,0,0,0,-0.171214988596166,0,0,0,0.031000326556327,0.134490105081111,0,0,-0.186034134767974,0,-0.192211683810048,-0.0815818795468414,0,0.154547189357629,-0.0655007305899393,-0.443895742825367,0,0.105739413005624,-0.0336704651422922,0,0,0.208094891546631,-0.023820420577424,0,0,0,0,0,0,0,0,-0.158234623596445,0.0937703648670258,0,0.0154191251784444,0,0,0,0,0,0,0,0.0560798888033103,-0.175783448431778,-0.0361441678552001,0,0,0,0,0,0,0,0.0712483526244379,0.000338518940532849,0,0,0.0280399444016552,0,0,0,0,0,0.148735231505089,0,0,0,0,0,-0.0409124724392948,0,0,0,0.105739413005624,0.0256521724362968,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0672391972321374,-0.467122023270853,0,0.105739413005624,0,0,0,0,0,-0.0471566315584951,0,0.0560798888033103,0,0,-0.0578044849056669,0,0,0,0.21797939734902,0,-0.104238141283076,0.795030732710736,0,0,0,0,0.0560798888033103,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0,0,0,0,0.5024626612589,0,0.190708751406682,-0.0671229757704752,0,0,0.0574941823822138,0,0,0,0,0,0,-0.00330047962687191,0,0,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0137814717548677,0,0,0,0,0.227676666647595,0,0,0.163785270913738,0,0,-0.0391631032977139,0,0,0,0,0.083906838048077,0,0.184797897885991,0.051584283450174,0.0701794580446841,0,0,0.59045929359018,0.104525955510098,0.105739413005624,0,0.00840039830766642,0.105739413005624,0.123931363987781,0.0560798888033103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31350192176769,0,0,0,0,0,0,0,0,0,0,0,0,0.052869706502812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0560798888033103,0.0717280497302077,0.105739413005624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0560798888033103,0.0257209447369861,0,0,0,0.080244499361489,0,0,0,0,0,0,0.0560798888033103,0,0.0560798888033103,0,0,0,0,0,0,0,0,0,0,0,0.0560798888033103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0560798888033103,0,0,0,-0.214720115543712,0,0,0,0,0,0,0,0,0.150298798479565,0,0.0080482991128086,0,0,0.245108653779478,0,-0.0843766322300271,0,0,0,0,0,0.0560798888033103,0,0,0,0,0,0,0,0,0,0.105739413005624,0.214738205585632,0,0,0,0,0.0581023023447056,0,0,0,0,0,0,0.0560798888033103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213214323827612,0,0,0.0944676627691199,0,0,0,0,0,0,0,0,0,0,0,0,-0.0052402903468161,0,0,0,0,0,0,0,0,0,0,0.00764984657764161,0,0,0,0,0,0,0,0,1.08999686653634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.155004407236742,-0.514972836325234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0280399444016552,0,0,0,0.105739413005624,0,0,0,0,0,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0,0,0,0,0,0,0.211953639524623,0,-0.166584757343343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00165697797102061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.114516196843289,0,0,0,0,0,0,0,0,0.150298798479565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0560798888033103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0424483893653569,0,0,0,0.095354375703341,0,0,0.0560798888033103,0,0,0,0.105739413005624,0,0,0,0,0,0,0,0.0280399444016552,0.052869706502812,0,0,0,0,0,0,0,0,0.052869706502812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.061882038583166,0,0,0,0,0,0,0,0.104980669650594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.090098549806236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0434328131913993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0280399444016552,0,0,0.0560798888033103,-0.0236621098616678,0.0560798888033103,0,0,0,0,0,0,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0.0933651241935852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0272171767732378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0.095354375703341,0,0,0,-0.0218980381199313,0.0280399444016552,0,0,0,0,0,0,0,0,0,0.159122685738422,0.052869706502812,0,0,0,0,0,0,0.0280399444016552,0,0,0,0,0,0,0,0,0,0,0.287281407222181,0,0,0.0137924203261944,0,-0.0846663719175633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0576342222520035,0,0,0.0718542066032444,0,0,0,0,0,0,0.105739413005624,0,0,0,0,0,0,0,0,0,0,0.0560798888033103,0,0,0,0,0,0.225808126583349,0,0.0645364747608702,-0.24677589004245,0,0,0.17566799356282,0.0560798888033103,0.0631021766669422,0.0149008236033928,0,0,-0.174992895090299,-0.134501262602866,0.0560798888033103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0820886249576001,0.0560798888033103,0.0560798888033103,0,-0.000779057359288862,0.131269918937889,0,-0.0560604722122479,0,0.105739413005624,-0.319284163716071,0,0.0280399444016552,0,-0.0959594073735869 | |||
|rna_box=119 | |rna_box=119 | ||
|rna_catalog_number=SC3505 | |rna_catalog_number=SC3505 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age=fetal | |sample_age=fetal | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.44346417143176e-280!GO:0043226;organelle;1.97416649650101e-231!GO:0043229;intracellular organelle;5.22886444980157e-231!GO:0043231;intracellular membrane-bound organelle;1.05375385511109e-214!GO:0043227;membrane-bound organelle;2.72793065016237e-214!GO:0005737;cytoplasm;2.26433027824147e-205!GO:0044422;organelle part;3.63973398945715e-178!GO:0044446;intracellular organelle part;9.79784704423852e-177!GO:0044444;cytoplasmic part;1.123692579126e-146!GO:0032991;macromolecular complex;6.53916478648961e-130!GO:0030529;ribonucleoprotein complex;9.51978172707707e-105!GO:0044237;cellular metabolic process;4.83016291864653e-96!GO:0044238;primary metabolic process;2.85157363405811e-95!GO:0005634;nucleus;3.15548592528243e-95!GO:0044428;nuclear part;3.82831121103435e-88!GO:0043233;organelle lumen;4.0392151531006e-88!GO:0031974;membrane-enclosed lumen;4.0392151531006e-88!GO:0043170;macromolecule metabolic process;4.43851881770723e-88!GO:0005515;protein binding;2.71884353608959e-86!GO:0003723;RNA binding;1.18537712282808e-80!GO:0005739;mitochondrion;6.01580512501295e-79!GO:0043234;protein complex;1.58748662722544e-67!GO:0005840;ribosome;1.39808736405373e-63!GO:0006396;RNA processing;5.11431702932758e-59!GO:0016043;cellular component organization and biogenesis;2.11223100374862e-58!GO:0006412;translation;7.35451468179071e-58!GO:0043228;non-membrane-bound organelle;3.48107878350728e-56!GO:0043232;intracellular non-membrane-bound organelle;3.48107878350728e-56!GO:0003735;structural constituent of ribosome;8.91859939151e-56!GO:0044429;mitochondrial part;9.63799793571319e-54!GO:0031981;nuclear lumen;2.30134195057832e-51!GO:0043283;biopolymer metabolic process;1.21909431956771e-50!GO:0031090;organelle membrane;1.34161457914826e-49!GO:0019538;protein metabolic process;3.17676085671264e-49!GO:0031967;organelle envelope;3.94147365084547e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.06653273439236e-49!GO:0031975;envelope;7.76726762317383e-49!GO:0033279;ribosomal subunit;3.00722414683884e-48!GO:0010467;gene expression;2.3752362764745e-47!GO:0009058;biosynthetic process;3.7030786905679e-46!GO:0044249;cellular biosynthetic process;3.78421560479723e-45!GO:0006996;organelle organization and biogenesis;2.02096462924634e-44!GO:0044260;cellular macromolecule metabolic process;4.21166399266851e-43!GO:0044267;cellular protein metabolic process;6.34818126879068e-43!GO:0016071;mRNA metabolic process;8.13934680299173e-43!GO:0009059;macromolecule biosynthetic process;1.22411495680582e-42!GO:0005829;cytosol;2.0102493167381e-41!GO:0033036;macromolecule localization;4.16620284058375e-41!GO:0015031;protein transport;2.67319576045294e-40!GO:0008380;RNA splicing;3.46642758812459e-40!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.30808625353395e-39!GO:0006259;DNA metabolic process;4.34012921314027e-38!GO:0046907;intracellular transport;6.82594691257703e-38!GO:0008104;protein localization;1.68523851205307e-37!GO:0006397;mRNA processing;3.15517073411014e-37!GO:0045184;establishment of protein localization;4.95022650699983e-37!GO:0065003;macromolecular complex assembly;1.89954979439552e-35!GO:0022607;cellular component assembly;7.20574534881405e-34!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.20574534881405e-34!GO:0005740;mitochondrial envelope;9.4184342380069e-34!GO:0007049;cell cycle;9.42646650951634e-34!GO:0031966;mitochondrial membrane;1.33455876955974e-31!GO:0019866;organelle inner membrane;4.47005992811868e-31!GO:0005654;nucleoplasm;3.23252216175627e-30!GO:0006886;intracellular protein transport;5.34450978386369e-30!GO:0003676;nucleic acid binding;1.46792251026346e-29!GO:0005743;mitochondrial inner membrane;3.57993327000424e-29!GO:0005681;spliceosome;1.24599614815268e-28!GO:0000278;mitotic cell cycle;1.62714410117461e-27!GO:0000166;nucleotide binding;2.0753488142346e-27!GO:0022402;cell cycle process;5.59610814046629e-27!GO:0044445;cytosolic part;8.80238223191372e-27!GO:0015934;large ribosomal subunit;8.72762537622913e-25!GO:0006974;response to DNA damage stimulus;8.87771288552246e-25!GO:0015935;small ribosomal subunit;1.37604415388068e-24!GO:0044451;nucleoplasm part;3.22971012502363e-24!GO:0051641;cellular localization;5.9664425360027e-24!GO:0051649;establishment of cellular localization;8.19095974079636e-24!GO:0031980;mitochondrial lumen;9.16302210046046e-24!GO:0005759;mitochondrial matrix;9.16302210046046e-24!GO:0006119;oxidative phosphorylation;1.53948945126158e-23!GO:0044455;mitochondrial membrane part;1.00787297495351e-22!GO:0005730;nucleolus;2.07580356873032e-22!GO:0016462;pyrophosphatase activity;2.14425342850831e-22!GO:0005694;chromosome;2.54804569727239e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.23597640475412e-22!GO:0022403;cell cycle phase;5.18726876170697e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;5.48156377640572e-22!GO:0017111;nucleoside-triphosphatase activity;1.47434978114284e-21!GO:0006457;protein folding;2.16839928828188e-21!GO:0000087;M phase of mitotic cell cycle;4.77378597357972e-21!GO:0006281;DNA repair;1.05420599831023e-20!GO:0007067;mitosis;1.18557080616006e-20!GO:0012505;endomembrane system;4.92751553056869e-20!GO:0022618;protein-RNA complex assembly;7.88670479417415e-20!GO:0016070;RNA metabolic process;1.13805573494643e-19!GO:0042254;ribosome biogenesis and assembly;1.13805573494643e-19!GO:0044427;chromosomal part;1.38682710132463e-19!GO:0005746;mitochondrial respiratory chain;2.30756253983761e-19!GO:0032553;ribonucleotide binding;8.88294130651424e-19!GO:0032555;purine ribonucleotide binding;8.88294130651424e-19!GO:0017076;purine nucleotide binding;1.02983564709328e-18!GO:0005761;mitochondrial ribosome;1.05457788369106e-18!GO:0000313;organellar ribosome;1.05457788369106e-18!GO:0000279;M phase;5.1280533932676e-18!GO:0051301;cell division;5.2577062554474e-18!GO:0009719;response to endogenous stimulus;5.44715567707781e-18!GO:0006260;DNA replication;5.67609337562591e-18!GO:0016874;ligase activity;7.45248195144934e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.89822579201459e-18!GO:0005783;endoplasmic reticulum;1.82880034413019e-17!GO:0006512;ubiquitin cycle;1.89381724716773e-17!GO:0051186;cofactor metabolic process;2.46019667015366e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.5726226009795e-17!GO:0008135;translation factor activity, nucleic acid binding;4.26210270411125e-17!GO:0048770;pigment granule;5.78682309478021e-17!GO:0042470;melanosome;5.78682309478021e-17!GO:0050136;NADH dehydrogenase (quinone) activity;6.56367142901288e-17!GO:0003954;NADH dehydrogenase activity;6.56367142901288e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.56367142901288e-17!GO:0044265;cellular macromolecule catabolic process;7.69577025052667e-17!GO:0005524;ATP binding;9.36027620022227e-17!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.02996257018714e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.36047983541182e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.39831298519043e-16!GO:0019941;modification-dependent protein catabolic process;2.00426721574614e-16!GO:0043632;modification-dependent macromolecule catabolic process;2.00426721574614e-16!GO:0006511;ubiquitin-dependent protein catabolic process;2.17453627454182e-16!GO:0032559;adenyl ribonucleotide binding;2.79692507685842e-16!GO:0043285;biopolymer catabolic process;4.00732100134516e-16!GO:0044257;cellular protein catabolic process;4.2542841296435e-16!GO:0030554;adenyl nucleotide binding;4.89637208581647e-16!GO:0005635;nuclear envelope;5.71371648457565e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;1.4186419242459e-15!GO:0000375;RNA splicing, via transesterification reactions;1.4186419242459e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.4186419242459e-15!GO:0006605;protein targeting;1.86623695086683e-15!GO:0044432;endoplasmic reticulum part;2.57643263808227e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.92729495056756e-15!GO:0042773;ATP synthesis coupled electron transport;2.92729495056756e-15!GO:0030964;NADH dehydrogenase complex (quinone);3.63773873220026e-15!GO:0045271;respiratory chain complex I;3.63773873220026e-15!GO:0005747;mitochondrial respiratory chain complex I;3.63773873220026e-15!GO:0009057;macromolecule catabolic process;3.94484732249364e-15!GO:0051276;chromosome organization and biogenesis;7.0578071267212e-15!GO:0031965;nuclear membrane;9.51674066663192e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.09181076075229e-14!GO:0030163;protein catabolic process;1.437516071452e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.62155228136758e-14!GO:0051082;unfolded protein binding;3.1581038905789e-14!GO:0044453;nuclear membrane part;4.4280509342712e-14!GO:0008134;transcription factor binding;8.18190394779356e-14!GO:0048193;Golgi vesicle transport;9.40019041595737e-14!GO:0006399;tRNA metabolic process;1.84575368434382e-13!GO:0006364;rRNA processing;2.00566060527921e-13!GO:0044248;cellular catabolic process;2.02584755382283e-13!GO:0003743;translation initiation factor activity;2.05007148899642e-13!GO:0006732;coenzyme metabolic process;2.26687458432832e-13!GO:0000074;regulation of progression through cell cycle;4.01677276856839e-13!GO:0051726;regulation of cell cycle;5.11042155689105e-13!GO:0016072;rRNA metabolic process;9.36852556421354e-13!GO:0042623;ATPase activity, coupled;1.18310692139855e-12!GO:0006413;translational initiation;1.54816597110525e-12!GO:0005794;Golgi apparatus;1.65903152700697e-12!GO:0016604;nuclear body;1.84769081576725e-12!GO:0016887;ATPase activity;3.91370620321272e-12!GO:0043412;biopolymer modification;5.27877525263627e-12!GO:0005643;nuclear pore;6.16744045043893e-12!GO:0009055;electron carrier activity;8.22061308608599e-12!GO:0005793;ER-Golgi intermediate compartment;9.96851696025828e-12!GO:0009259;ribonucleotide metabolic process;1.27368248285678e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;2.84815116403831e-11!GO:0004386;helicase activity;3.0376471808791e-11!GO:0006913;nucleocytoplasmic transport;3.89804386140584e-11!GO:0065002;intracellular protein transport across a membrane;3.96495759257134e-11!GO:0006163;purine nucleotide metabolic process;3.9740483886385e-11!GO:0006446;regulation of translational initiation;7.04535435916746e-11!GO:0015630;microtubule cytoskeleton;8.46620659759676e-11!GO:0006323;DNA packaging;9.16121497913182e-11!GO:0051169;nuclear transport;9.58879978638411e-11!GO:0006464;protein modification process;2.27368177373132e-10!GO:0009150;purine ribonucleotide metabolic process;2.5820141245263e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.5820141245263e-10!GO:0016192;vesicle-mediated transport;3.48482072424777e-10!GO:0008026;ATP-dependent helicase activity;4.11965683848988e-10!GO:0006461;protein complex assembly;4.58762096916194e-10!GO:0006403;RNA localization;4.99131927549495e-10!GO:0006164;purine nucleotide biosynthetic process;4.99131927549495e-10!GO:0030532;small nuclear ribonucleoprotein complex;5.27701036381117e-10!GO:0000785;chromatin;5.27701036381117e-10!GO:0050657;nucleic acid transport;5.27701036381117e-10!GO:0051236;establishment of RNA localization;5.27701036381117e-10!GO:0050658;RNA transport;5.27701036381117e-10!GO:0009260;ribonucleotide biosynthetic process;5.27701036381117e-10!GO:0065004;protein-DNA complex assembly;5.76476637269035e-10!GO:0012501;programmed cell death;5.78843570123585e-10!GO:0046930;pore complex;6.61108338553568e-10!GO:0005789;endoplasmic reticulum membrane;8.02162539968777e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.60277633747558e-10!GO:0004812;aminoacyl-tRNA ligase activity;8.60277633747558e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.60277633747558e-10!GO:0006915;apoptosis;9.74951159838883e-10!GO:0006333;chromatin assembly or disassembly;1.09522127554828e-09!GO:0008565;protein transporter activity;1.18006780570156e-09!GO:0016607;nuclear speck;1.22549408276002e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.48192855751824e-09!GO:0043038;amino acid activation;1.66611285778503e-09!GO:0006418;tRNA aminoacylation for protein translation;1.66611285778503e-09!GO:0043039;tRNA aminoacylation;1.66611285778503e-09!GO:0009060;aerobic respiration;2.42608596334649e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.83369083500085e-09!GO:0043687;post-translational protein modification;2.87267001080269e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.04721784936244e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.59367629895932e-09!GO:0003712;transcription cofactor activity;5.26765636741532e-09!GO:0008639;small protein conjugating enzyme activity;5.78956408623817e-09!GO:0045333;cellular respiration;5.78956408623817e-09!GO:0009141;nucleoside triphosphate metabolic process;6.05496041331494e-09!GO:0003697;single-stranded DNA binding;6.08095065097318e-09!GO:0017038;protein import;6.58622847649256e-09!GO:0006261;DNA-dependent DNA replication;6.96532636455777e-09!GO:0005788;endoplasmic reticulum lumen;7.26898721568256e-09!GO:0051188;cofactor biosynthetic process;8.93504921390192e-09!GO:0048523;negative regulation of cellular process;9.87188843054273e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.08082371629469e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.08082371629469e-08!GO:0004842;ubiquitin-protein ligase activity;1.23617581968752e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.24985736362095e-08!GO:0000775;chromosome, pericentric region;1.2931018945585e-08!GO:0016779;nucleotidyltransferase activity;1.2933689658757e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.30765458297073e-08!GO:0007005;mitochondrion organization and biogenesis;1.32756597940365e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.56395303376594e-08!GO:0008219;cell death;1.72382135099141e-08!GO:0016265;death;1.72382135099141e-08!GO:0043566;structure-specific DNA binding;1.97292634058283e-08!GO:0006366;transcription from RNA polymerase II promoter;2.28117028271714e-08!GO:0051028;mRNA transport;2.56387728103321e-08!GO:0006334;nucleosome assembly;2.64101341629564e-08!GO:0005819;spindle;2.69865072482414e-08!GO:0007010;cytoskeleton organization and biogenesis;2.77082284253029e-08!GO:0051329;interphase of mitotic cell cycle;2.8839016913286e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.90880646116565e-08!GO:0019787;small conjugating protein ligase activity;3.00505919257097e-08!GO:0009117;nucleotide metabolic process;3.82801424012455e-08!GO:0031497;chromatin assembly;6.51285429763812e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.65296394197818e-08!GO:0016740;transferase activity;6.83534564932705e-08!GO:0009142;nucleoside triphosphate biosynthetic process;7.09802200999878e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.09802200999878e-08!GO:0005813;centrosome;7.50968814876408e-08!GO:0006099;tricarboxylic acid cycle;7.50968814876408e-08!GO:0046356;acetyl-CoA catabolic process;7.50968814876408e-08!GO:0050794;regulation of cellular process;7.53855861249335e-08!GO:0015986;ATP synthesis coupled proton transport;8.42216198862723e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.42216198862723e-08!GO:0051325;interphase;9.98896684710011e-08!GO:0046034;ATP metabolic process;1.01519421310352e-07!GO:0005667;transcription factor complex;1.20716596457583e-07!GO:0003899;DNA-directed RNA polymerase activity;1.26019295594741e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.48678112350438e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.6927494288498e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.6927494288498e-07!GO:0009056;catabolic process;1.89553124668245e-07!GO:0006084;acetyl-CoA metabolic process;1.96297635865431e-07!GO:0019829;cation-transporting ATPase activity;2.05728471312066e-07!GO:0030120;vesicle coat;2.13067415520761e-07!GO:0030662;coated vesicle membrane;2.13067415520761e-07!GO:0016881;acid-amino acid ligase activity;2.14613711089079e-07!GO:0016853;isomerase activity;2.16657264152979e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.28163795475132e-07!GO:0005815;microtubule organizing center;2.398471690206e-07!GO:0051187;cofactor catabolic process;2.42776698349418e-07!GO:0048519;negative regulation of biological process;2.87068803210538e-07!GO:0009109;coenzyme catabolic process;2.87068803210538e-07!GO:0008092;cytoskeletal protein binding;2.9157926462078e-07!GO:0005762;mitochondrial large ribosomal subunit;3.08213950203094e-07!GO:0000315;organellar large ribosomal subunit;3.08213950203094e-07!GO:0051246;regulation of protein metabolic process;3.62580142070911e-07!GO:0003924;GTPase activity;4.42512074346229e-07!GO:0009108;coenzyme biosynthetic process;4.86180145885378e-07!GO:0005657;replication fork;5.73218425365467e-07!GO:0048475;coated membrane;5.73218425365467e-07!GO:0030117;membrane coat;5.73218425365467e-07!GO:0000245;spliceosome assembly;6.65460559600939e-07!GO:0045259;proton-transporting ATP synthase complex;8.90753132410788e-07!GO:0007051;spindle organization and biogenesis;9.25832460252334e-07!GO:0008094;DNA-dependent ATPase activity;1.19247271797518e-06!GO:0016491;oxidoreductase activity;1.32055253991445e-06!GO:0006754;ATP biosynthetic process;1.5808426570203e-06!GO:0006753;nucleoside phosphate metabolic process;1.5808426570203e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.79937775638625e-06!GO:0006752;group transfer coenzyme metabolic process;1.84603456992235e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.10886750732861e-06!GO:0051170;nuclear import;3.0727402579795e-06!GO:0016859;cis-trans isomerase activity;3.31435203497864e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.06120051936673e-06!GO:0000314;organellar small ribosomal subunit;4.17998689019941e-06!GO:0005763;mitochondrial small ribosomal subunit;4.17998689019941e-06!GO:0000075;cell cycle checkpoint;4.59236746651039e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.07760715703093e-06!GO:0050789;regulation of biological process;5.46265586974133e-06!GO:0043623;cellular protein complex assembly;5.57708149337829e-06!GO:0016568;chromatin modification;5.97691873107681e-06!GO:0005768;endosome;6.15414004898034e-06!GO:0043069;negative regulation of programmed cell death;6.27651157874327e-06!GO:0006606;protein import into nucleus;6.27651157874327e-06!GO:0032446;protein modification by small protein conjugation;6.38776081106057e-06!GO:0006613;cotranslational protein targeting to membrane;6.92449481507299e-06!GO:0006916;anti-apoptosis;7.05160254178432e-06!GO:0030036;actin cytoskeleton organization and biogenesis;7.59105769450651e-06!GO:0042981;regulation of apoptosis;8.23685216170444e-06!GO:0043066;negative regulation of apoptosis;8.25912659980514e-06!GO:0004298;threonine endopeptidase activity;8.84246992700273e-06!GO:0006091;generation of precursor metabolites and energy;8.92697949853782e-06!GO:0016567;protein ubiquitination;9.17922329916854e-06!GO:0030029;actin filament-based process;9.41863070908626e-06!GO:0031252;leading edge;9.79895374047899e-06!GO:0044431;Golgi apparatus part;1.01637318024032e-05!GO:0043067;regulation of programmed cell death;1.05285344786975e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.22696967720788e-05!GO:0045786;negative regulation of progression through cell cycle;1.42400554955305e-05!GO:0044452;nucleolar part;1.54447540601398e-05!GO:0019843;rRNA binding;1.58903068074838e-05!GO:0031324;negative regulation of cellular metabolic process;1.75964682381633e-05!GO:0015980;energy derivation by oxidation of organic compounds;1.82145168591542e-05!GO:0008654;phospholipid biosynthetic process;2.09377425934355e-05!GO:0000151;ubiquitin ligase complex;2.26300206458067e-05!GO:0006793;phosphorus metabolic process;2.42212653503279e-05!GO:0006796;phosphate metabolic process;2.42212653503279e-05!GO:0008033;tRNA processing;2.42819661515137e-05!GO:0003724;RNA helicase activity;2.51609721434175e-05!GO:0045454;cell redox homeostasis;2.52265558153108e-05!GO:0051427;hormone receptor binding;2.70815295126025e-05!GO:0006302;double-strand break repair;2.91991070824785e-05!GO:0043021;ribonucleoprotein binding;3.04356776243602e-05!GO:0005798;Golgi-associated vesicle;4.06534471889367e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.12518808823911e-05!GO:0016787;hydrolase activity;4.93302988583029e-05!GO:0005525;GTP binding;5.34345087045478e-05!GO:0006626;protein targeting to mitochondrion;5.59592252183749e-05!GO:0019899;enzyme binding;5.60031108283008e-05!GO:0035257;nuclear hormone receptor binding;6.053368216654e-05!GO:0030867;rough endoplasmic reticulum membrane;6.1959833058467e-05!GO:0016564;transcription repressor activity;6.34789456592392e-05!GO:0003714;transcription corepressor activity;7.10375315358796e-05!GO:0009892;negative regulation of metabolic process;7.32786513277106e-05!GO:0005048;signal sequence binding;7.67397191793583e-05!GO:0016741;transferase activity, transferring one-carbon groups;7.79762314695377e-05!GO:0043681;protein import into mitochondrion;8.59404299420199e-05!GO:0006383;transcription from RNA polymerase III promoter;8.75377797093978e-05!GO:0044440;endosomal part;9.22550777709629e-05!GO:0010008;endosome membrane;9.22550777709629e-05!GO:0005791;rough endoplasmic reticulum;9.35336165752794e-05!GO:0016310;phosphorylation;0.00010479871697885!GO:0008168;methyltransferase activity;0.000110130354735187!GO:0016023;cytoplasmic membrane-bound vesicle;0.000110184968915249!GO:0016126;sterol biosynthetic process;0.00011275340327791!GO:0009165;nucleotide biosynthetic process;0.000116690694999176!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000117061775221131!GO:0016563;transcription activator activity;0.000117705921848808!GO:0006310;DNA recombination;0.00012085898925542!GO:0031988;membrane-bound vesicle;0.000121057936793149!GO:0051052;regulation of DNA metabolic process;0.000123795484913422!GO:0000776;kinetochore;0.000127534946034974!GO:0003684;damaged DNA binding;0.000131759999296121!GO:0003713;transcription coactivator activity;0.000145733955246363!GO:0007088;regulation of mitosis;0.000150776072260835!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000150843716385673!GO:0006612;protein targeting to membrane;0.000159666488725609!GO:0016363;nuclear matrix;0.000163064867294277!GO:0005769;early endosome;0.000167835920734302!GO:0000139;Golgi membrane;0.000171361477850003!GO:0000786;nucleosome;0.000176426033953137!GO:0004527;exonuclease activity;0.000182050672763184!GO:0003729;mRNA binding;0.000184518280542546!GO:0030880;RNA polymerase complex;0.000184629698480359!GO:0031968;organelle outer membrane;0.000203818223352181!GO:0005874;microtubule;0.000226321563669505!GO:0006839;mitochondrial transport;0.000230941175700216!GO:0000059;protein import into nucleus, docking;0.000237414946982068!GO:0019867;outer membrane;0.000238323382874073!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000242191270777139!GO:0008361;regulation of cell size;0.000269400950078675!GO:0033116;ER-Golgi intermediate compartment membrane;0.000274821108190116!GO:0030133;transport vesicle;0.000279283689632093!GO:0051789;response to protein stimulus;0.000280924535317707!GO:0006986;response to unfolded protein;0.000280924535317707!GO:0003678;DNA helicase activity;0.000282138868044723!GO:0016049;cell growth;0.000286846582484213!GO:0007059;chromosome segregation;0.000288708157529034!GO:0051168;nuclear export;0.000300770145168131!GO:0005770;late endosome;0.000306107746575177!GO:0042802;identical protein binding;0.000342134031676875!GO:0004576;oligosaccharyl transferase activity;0.000353279387184696!GO:0016481;negative regulation of transcription;0.000380666648111023!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000391785056454632!GO:0003690;double-stranded DNA binding;0.000391798357870829!GO:0032561;guanyl ribonucleotide binding;0.000397737376963954!GO:0019001;guanyl nucleotide binding;0.000397737376963954!GO:0019222;regulation of metabolic process;0.000399731521807224!GO:0007093;mitotic cell cycle checkpoint;0.000403673137645433!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000411865580974069!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000417964250788497!GO:0031982;vesicle;0.000419211981633567!GO:0008250;oligosaccharyl transferase complex;0.000430902688800281!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000460638619952936!GO:0000428;DNA-directed RNA polymerase complex;0.000460638619952936!GO:0005885;Arp2/3 protein complex;0.000471643038992634!GO:0031410;cytoplasmic vesicle;0.00050303062556422!GO:0006414;translational elongation;0.00051607522533199!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000534379136506727!GO:0046474;glycerophospholipid biosynthetic process;0.000534395861848864!GO:0001558;regulation of cell growth;0.000558464690623959!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.0005732863810051!GO:0005856;cytoskeleton;0.000575106886693922!GO:0007006;mitochondrial membrane organization and biogenesis;0.000612421891267186!GO:0005684;U2-dependent spliceosome;0.000635299751131022!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000636989168031703!GO:0051252;regulation of RNA metabolic process;0.000672436860400855!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000683220281702756!GO:0007052;mitotic spindle organization and biogenesis;0.000700872989769204!GO:0000082;G1/S transition of mitotic cell cycle;0.000735519896046089!GO:0008186;RNA-dependent ATPase activity;0.00077069787613467!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00077937500008878!GO:0005741;mitochondrial outer membrane;0.000792412644448119!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00080679771576662!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00080679771576662!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00080679771576662!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00082328585178392!GO:0051540;metal cluster binding;0.000905540333790618!GO:0051536;iron-sulfur cluster binding;0.000905540333790618!GO:0006695;cholesterol biosynthetic process;0.000913538761379243!GO:0051920;peroxiredoxin activity;0.000944171299348389!GO:0015631;tubulin binding;0.00100968328081566!GO:0030663;COPI coated vesicle membrane;0.00105897999038201!GO:0030126;COPI vesicle coat;0.00105897999038201!GO:0035258;steroid hormone receptor binding;0.00106530830644837!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00112198799209665!GO:0003779;actin binding;0.00113440109703615!GO:0031072;heat shock protein binding;0.00113467280577559!GO:0015629;actin cytoskeleton;0.00114353109783582!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00115880075807251!GO:0048500;signal recognition particle;0.00121476894522784!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00125706351528561!GO:0015002;heme-copper terminal oxidase activity;0.00125706351528561!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00125706351528561!GO:0004129;cytochrome-c oxidase activity;0.00125706351528561!GO:0018196;peptidyl-asparagine modification;0.00130367468238348!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00130367468238348!GO:0009112;nucleobase metabolic process;0.00133631414919673!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00137009739581574!GO:0005905;coated pit;0.00138179123026593!GO:0006402;mRNA catabolic process;0.00142879995574514!GO:0006950;response to stress;0.00145459122870927!GO:0006891;intra-Golgi vesicle-mediated transport;0.00153255962014742!GO:0007017;microtubule-based process;0.00153853810106887!GO:0006275;regulation of DNA replication;0.00157051970363323!GO:0008139;nuclear localization sequence binding;0.00161678581162904!GO:0046483;heterocycle metabolic process;0.00167797175493004!GO:0051287;NAD binding;0.0017171185819589!GO:0043284;biopolymer biosynthetic process;0.00174051869116261!GO:0008312;7S RNA binding;0.00186530137956555!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00198232619748752!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00200619973574412!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00200619973574412!GO:0004004;ATP-dependent RNA helicase activity;0.0020282329564102!GO:0003682;chromatin binding;0.00210793237930922!GO:0000049;tRNA binding;0.00222845713467319!GO:0031124;mRNA 3'-end processing;0.00236011795504011!GO:0008610;lipid biosynthetic process;0.00246724908049935!GO:0001726;ruffle;0.0025025039409961!GO:0043488;regulation of mRNA stability;0.0025082724269051!GO:0043487;regulation of RNA stability;0.0025082724269051!GO:0004518;nuclease activity;0.00257442733610449!GO:0006595;polyamine metabolic process;0.00261533159386379!GO:0051539;4 iron, 4 sulfur cluster binding;0.00275016879064041!GO:0000228;nuclear chromosome;0.00291171860288093!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00314846936970896!GO:0045047;protein targeting to ER;0.00314846936970896!GO:0030137;COPI-coated vesicle;0.00320880656735782!GO:0009116;nucleoside metabolic process;0.00322872073289407!GO:0008180;signalosome;0.00325793216431569!GO:0032508;DNA duplex unwinding;0.00326179614736355!GO:0032392;DNA geometric change;0.00326179614736355!GO:0051087;chaperone binding;0.00343950217697574!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00363873925499926!GO:0065007;biological regulation;0.00363873925499926!GO:0043596;nuclear replication fork;0.00365781519348743!GO:0005758;mitochondrial intermembrane space;0.00365781519348743!GO:0030658;transport vesicle membrane;0.0036764240919555!GO:0050662;coenzyme binding;0.00383453660659313!GO:0006401;RNA catabolic process;0.00386452429274135!GO:0007050;cell cycle arrest;0.00392988601104153!GO:0016272;prefoldin complex;0.00404142830075618!GO:0006144;purine base metabolic process;0.0041363203336977!GO:0005865;striated muscle thin filament;0.00419989942220384!GO:0030132;clathrin coat of coated pit;0.00423886599568231!GO:0048471;perinuclear region of cytoplasm;0.00427724708380899!GO:0006220;pyrimidine nucleotide metabolic process;0.00431816893682602!GO:0004674;protein serine/threonine kinase activity;0.00437379728547553!GO:0000922;spindle pole;0.00438719282190072!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00439904107912805!GO:0007346;regulation of progression through mitotic cell cycle;0.00442112155811754!GO:0051128;regulation of cellular component organization and biogenesis;0.004510759011149!GO:0031970;organelle envelope lumen;0.00458805246375791!GO:0005876;spindle microtubule;0.0047128548932403!GO:0042770;DNA damage response, signal transduction;0.004714003790566!GO:0046489;phosphoinositide biosynthetic process;0.00478240559273963!GO:0003746;translation elongation factor activity;0.00493459604290563!GO:0046467;membrane lipid biosynthetic process;0.00499890542652647!GO:0030134;ER to Golgi transport vesicle;0.005030871517113!GO:0000910;cytokinesis;0.00506002485565017!GO:0030118;clathrin coat;0.00549510921263231!GO:0030521;androgen receptor signaling pathway;0.00556271324655966!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00557026276859439!GO:0004003;ATP-dependent DNA helicase activity;0.00568887787737151!GO:0001725;stress fiber;0.00577356913581171!GO:0032432;actin filament bundle;0.00577356913581171!GO:0030127;COPII vesicle coat;0.00587299490502635!GO:0012507;ER to Golgi transport vesicle membrane;0.00587299490502635!GO:0016044;membrane organization and biogenesis;0.00609302419552152!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00611446841493749!GO:0000178;exosome (RNase complex);0.00617040148882995!GO:0006268;DNA unwinding during replication;0.00622664114848859!GO:0006352;transcription initiation;0.00624426633112734!GO:0017166;vinculin binding;0.00642534097265099!GO:0030176;integral to endoplasmic reticulum membrane;0.00663102547452173!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00672732027070091!GO:0030027;lamellipodium;0.00686699181298151!GO:0019752;carboxylic acid metabolic process;0.00715077112841256!GO:0005637;nuclear inner membrane;0.00715122149683852!GO:0006740;NADPH regeneration;0.00741497732241047!GO:0006098;pentose-phosphate shunt;0.00741497732241047!GO:0006082;organic acid metabolic process;0.0075327175279128!GO:0006520;amino acid metabolic process;0.0077579510506354!GO:0031570;DNA integrity checkpoint;0.00808277364197254!GO:0044262;cellular carbohydrate metabolic process;0.00819588870490246!GO:0043022;ribosome binding;0.00831518584655172!GO:0005832;chaperonin-containing T-complex;0.0083531087176061!GO:0016197;endosome transport;0.00841447142203506!GO:0008408;3'-5' exonuclease activity;0.00847667859879312!GO:0006007;glucose catabolic process;0.00848070839332478!GO:0000725;recombinational repair;0.00873046605191295!GO:0000724;double-strand break repair via homologous recombination;0.00873046605191295!GO:0048522;positive regulation of cellular process;0.00892570818082787!GO:0008243;plasminogen activator activity;0.00894346169024905!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0090556219548512!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00926796056163374!GO:0015992;proton transport;0.00960723397555355!GO:0016251;general RNA polymerase II transcription factor activity;0.00979683405961899!GO:0008047;enzyme activator activity;0.00980767149272934!GO:0022890;inorganic cation transmembrane transporter activity;0.00983446591519186!GO:0032984;macromolecular complex disassembly;0.0098381071308264!GO:0006289;nucleotide-excision repair;0.00983893652827538!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00983893652827538!GO:0009303;rRNA transcription;0.0100372243449485!GO:0009451;RNA modification;0.0101667306535503!GO:0006818;hydrogen transport;0.0101996122424925!GO:0043601;nuclear replisome;0.010398622272837!GO:0030894;replisome;0.010398622272837!GO:0048487;beta-tubulin binding;0.0105492033550931!GO:0030660;Golgi-associated vesicle membrane;0.0106517193367524!GO:0006611;protein export from nucleus;0.010738891980583!GO:0006405;RNA export from nucleus;0.010738891980583!GO:0004532;exoribonuclease activity;0.010738891980583!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.010738891980583!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0108055902484071!GO:0050681;androgen receptor binding;0.0108390506274588!GO:0031901;early endosome membrane;0.0108415835766662!GO:0031123;RNA 3'-end processing;0.0110417345515485!GO:0008022;protein C-terminus binding;0.0113272564680883!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0114578415345109!GO:0000339;RNA cap binding;0.0116674577269592!GO:0065009;regulation of a molecular function;0.0117479796816431!GO:0009124;nucleoside monophosphate biosynthetic process;0.0117479796816431!GO:0009123;nucleoside monophosphate metabolic process;0.0117479796816431!GO:0031625;ubiquitin protein ligase binding;0.0124062020425485!GO:0016408;C-acyltransferase activity;0.0124062020425485!GO:0003711;transcription elongation regulator activity;0.0125297276728249!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.012646666465228!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0127519106627115!GO:0005096;GTPase activator activity;0.0127797755132681!GO:0005869;dynactin complex;0.0132050146820716!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0132655495520793!GO:0005669;transcription factor TFIID complex;0.0133055219086177!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0136885649803313!GO:0015399;primary active transmembrane transporter activity;0.0136885649803313!GO:0005862;muscle thin filament tropomyosin;0.0138074682143276!GO:0006270;DNA replication initiation;0.0140363950343424!GO:0006541;glutamine metabolic process;0.0143494373022033!GO:0000792;heterochromatin;0.0143600443488686!GO:0043241;protein complex disassembly;0.0145679345422627!GO:0045941;positive regulation of transcription;0.014779738156787!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0147965054489333!GO:0000287;magnesium ion binding;0.0153247312962278!GO:0006284;base-excision repair;0.0153616144055916!GO:0007243;protein kinase cascade;0.0156276617513412!GO:0003756;protein disulfide isomerase activity;0.0156276617513412!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0156276617513412!GO:0030833;regulation of actin filament polymerization;0.0157279590729747!GO:0019206;nucleoside kinase activity;0.0157279590729747!GO:0007021;tubulin folding;0.0160292761960792!GO:0016860;intramolecular oxidoreductase activity;0.0161408726746245!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0162314622829195!GO:0051101;regulation of DNA binding;0.0164747804713399!GO:0043624;cellular protein complex disassembly;0.0167172931461563!GO:0006778;porphyrin metabolic process;0.0168311159336617!GO:0033013;tetrapyrrole metabolic process;0.0168311159336617!GO:0006979;response to oxidative stress;0.0175559778667158!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0175966536368014!GO:0032200;telomere organization and biogenesis;0.0175966536368014!GO:0000723;telomere maintenance;0.0175966536368014!GO:0033673;negative regulation of kinase activity;0.0176275615605125!GO:0006469;negative regulation of protein kinase activity;0.0176275615605125!GO:0031323;regulation of cellular metabolic process;0.0176275615605125!GO:0006378;mRNA polyadenylation;0.0183197907154559!GO:0048146;positive regulation of fibroblast proliferation;0.0184117048708622!GO:0048144;fibroblast proliferation;0.0184117048708622!GO:0048145;regulation of fibroblast proliferation;0.0184117048708622!GO:0030041;actin filament polymerization;0.0185790358796537!GO:0006650;glycerophospholipid metabolic process;0.0190525362160657!GO:0046112;nucleobase biosynthetic process;0.0195831506309793!GO:0006733;oxidoreduction coenzyme metabolic process;0.0196213116523514!GO:0000084;S phase of mitotic cell cycle;0.0203048440923988!GO:0051348;negative regulation of transferase activity;0.0203442284154921!GO:0040008;regulation of growth;0.0207827644721034!GO:0033559;unsaturated fatty acid metabolic process;0.0212313525271332!GO:0006636;unsaturated fatty acid biosynthetic process;0.0212313525271332!GO:0008629;induction of apoptosis by intracellular signals;0.0214158564094706!GO:0008632;apoptotic program;0.0219167402963218!GO:0048037;cofactor binding;0.0219883666614953!GO:0043189;H4/H2A histone acetyltransferase complex;0.0219902437320481!GO:0016407;acetyltransferase activity;0.0220313031808134!GO:0031529;ruffle organization and biogenesis;0.0223732957595273!GO:0016584;nucleosome positioning;0.0223732957595273!GO:0030496;midbody;0.0225498921620426!GO:0035267;NuA4 histone acetyltransferase complex;0.0225912539718429!GO:0006118;electron transport;0.0228689551077333!GO:0030032;lamellipodium biogenesis;0.0228954887541138!GO:0040029;regulation of gene expression, epigenetic;0.0233616953242704!GO:0009161;ribonucleoside monophosphate metabolic process;0.0233616953242704!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0233616953242704!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0235497090766265!GO:0045039;protein import into mitochondrial inner membrane;0.0235497090766265!GO:0051053;negative regulation of DNA metabolic process;0.0237213573450027!GO:0030031;cell projection biogenesis;0.023792220727826!GO:0006376;mRNA splice site selection;0.0241535782355689!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0241535782355689!GO:0000819;sister chromatid segregation;0.024206021478342!GO:0045892;negative regulation of transcription, DNA-dependent;0.024206021478342!GO:0000070;mitotic sister chromatid segregation;0.0243392255467914!GO:0030508;thiol-disulfide exchange intermediate activity;0.0243502775141441!GO:0000077;DNA damage checkpoint;0.0243773301398979!GO:0005663;DNA replication factor C complex;0.0248711685676919!GO:0022415;viral reproductive process;0.0251053676262922!GO:0000209;protein polyubiquitination;0.0255493591795477!GO:0006506;GPI anchor biosynthetic process;0.025804721241287!GO:0000096;sulfur amino acid metabolic process;0.0261802873574874!GO:0030119;AP-type membrane coat adaptor complex;0.0261861482441828!GO:0032981;mitochondrial respiratory chain complex I assembly;0.026259039799021!GO:0010257;NADH dehydrogenase complex assembly;0.026259039799021!GO:0033108;mitochondrial respiratory chain complex assembly;0.026259039799021!GO:0006350;transcription;0.0264104169464078!GO:0051098;regulation of binding;0.0264104169464078!GO:0007517;muscle development;0.0264512179530888!GO:0045792;negative regulation of cell size;0.0267002002968076!GO:0030308;negative regulation of cell growth;0.0271904454937989!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0272498971060845!GO:0006497;protein amino acid lipidation;0.0275857109336682!GO:0000152;nuclear ubiquitin ligase complex;0.0276491926290182!GO:0006509;membrane protein ectodomain proteolysis;0.0276593611517029!GO:0033619;membrane protein proteolysis;0.0276593611517029!GO:0048468;cell development;0.0279719227493811!GO:0004177;aminopeptidase activity;0.0283554706334883!GO:0045893;positive regulation of transcription, DNA-dependent;0.0288635292219415!GO:0005773;vacuole;0.0291436871864826!GO:0004448;isocitrate dehydrogenase activity;0.0293071548988572!GO:0006739;NADP metabolic process;0.029489163158461!GO:0030145;manganese ion binding;0.030334256415456!GO:0030125;clathrin vesicle coat;0.0304547104822354!GO:0030665;clathrin coated vesicle membrane;0.0304547104822354!GO:0046128;purine ribonucleoside metabolic process;0.0304716955892414!GO:0042278;purine nucleoside metabolic process;0.0304716955892414!GO:0006779;porphyrin biosynthetic process;0.0305712055896456!GO:0033014;tetrapyrrole biosynthetic process;0.0305712055896456!GO:0035035;histone acetyltransferase binding;0.030931384502655!GO:0031371;ubiquitin conjugating enzyme complex;0.031332144379522!GO:0005732;small nucleolar ribonucleoprotein complex;0.031612896207744!GO:0042393;histone binding;0.0322702361380772!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0325772662564323!GO:0033043;regulation of organelle organization and biogenesis;0.0325772662564323!GO:0006505;GPI anchor metabolic process;0.0332135249506122!GO:0032259;methylation;0.0333562306635464!GO:0000793;condensed chromosome;0.0334099761227547!GO:0051320;S phase;0.033476401465012!GO:0030433;ER-associated protein catabolic process;0.033615227510573!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.033615227510573!GO:0030911;TPR domain binding;0.0338596175860712!GO:0008538;proteasome activator activity;0.0344140328441986!GO:0009081;branched chain family amino acid metabolic process;0.0344583728203471!GO:0004523;ribonuclease H activity;0.034529069745344!GO:0006596;polyamine biosynthetic process;0.0347778095751794!GO:0008234;cysteine-type peptidase activity;0.0352247638122209!GO:0007264;small GTPase mediated signal transduction;0.0357417504231509!GO:0042026;protein refolding;0.0363538175164113!GO:0051537;2 iron, 2 sulfur cluster binding;0.0367534071537482!GO:0000175;3'-5'-exoribonuclease activity;0.0370488602295449!GO:0008143;poly(A) binding;0.037359326724425!GO:0030865;cortical cytoskeleton organization and biogenesis;0.037359326724425!GO:0009262;deoxyribonucleotide metabolic process;0.037359326724425!GO:0006360;transcription from RNA polymerase I promoter;0.03750554237837!GO:0009119;ribonucleoside metabolic process;0.0376308629174113!GO:0005784;translocon complex;0.0376332199867238!GO:0030518;steroid hormone receptor signaling pathway;0.0377259608379418!GO:0031577;spindle checkpoint;0.037726948461747!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0378078324494123!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0378078324494123!GO:0043414;biopolymer methylation;0.0378078324494123!GO:0006221;pyrimidine nucleotide biosynthetic process;0.0380666042935672!GO:0019783;small conjugating protein-specific protease activity;0.0383086136684457!GO:0050178;phenylpyruvate tautomerase activity;0.038556856901822!GO:0006892;post-Golgi vesicle-mediated transport;0.0393445963407626!GO:0008299;isoprenoid biosynthetic process;0.0393885676187675!GO:0042168;heme metabolic process;0.0403757322706159!GO:0006607;NLS-bearing substrate import into nucleus;0.0408540117761655!GO:0006338;chromatin remodeling;0.0408540117761655!GO:0008652;amino acid biosynthetic process;0.0413996132133216!GO:0008154;actin polymerization and/or depolymerization;0.0415463656055009!GO:0004843;ubiquitin-specific protease activity;0.0416985702048386!GO:0008017;microtubule binding;0.0416985702048386!GO:0000726;non-recombinational repair;0.0418797363658805!GO:0044430;cytoskeletal part;0.0426545076230174!GO:0030131;clathrin adaptor complex;0.0427299251266637!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0428637917843243!GO:0005100;Rho GTPase activator activity;0.0434648528110161!GO:0042158;lipoprotein biosynthetic process;0.043511840911053!GO:0007569;cell aging;0.0436000396025661!GO:0009225;nucleotide-sugar metabolic process;0.0438588211233951!GO:0022411;cellular component disassembly;0.0442863729307379!GO:0015036;disulfide oxidoreductase activity;0.044695757058673!GO:0030659;cytoplasmic vesicle membrane;0.0455109142606161!GO:0003887;DNA-directed DNA polymerase activity;0.0455109142606161!GO:0008097;5S rRNA binding;0.0465152083346611!GO:0006417;regulation of translation;0.0465152083346611!GO:0044454;nuclear chromosome part;0.0465152083346611!GO:0000781;chromosome, telomeric region;0.0469782476273577!GO:0007004;telomere maintenance via telomerase;0.0472749722974426!GO:0003702;RNA polymerase II transcription factor activity;0.0475565430587453!GO:0005680;anaphase-promoting complex;0.048141821917181!GO:0006400;tRNA modification;0.0481547666294428!GO:0005850;eukaryotic translation initiation factor 2 complex;0.048179508915046!GO:0000123;histone acetyltransferase complex;0.0483170244461438 | |||
|sample_id=11459 | |sample_id=11459 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=skeletal muscle | |sample_tissue=skeletal muscle | ||
|top_motifs=NKX3-1:1.32918982569;NR3C1:1.21715964299;TFDP1:1.21077742298;RXR{A,B,G}:1.1690623629;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15612512097;SRF:1.14437992248;E2F1..5:1.11715537782;POU3F1..4:1.07316271712;ALX4:1.06314440746;HES1:0.974545485156;POU1F1:0.947924912669;GFI1:0.947917551617;EN1,2:0.854857309452;GFI1B:0.797172530709;TEAD1:0.795231920816;UFEwm:0.794940581357;MEF2{A,B,C,D}:0.786410528187;NKX2-2,8:0.7184468274;MYB:0.695766193336;NFY{A,B,C}:0.667906682098;TBP:0.656115082885;GZF1:0.651558884071;PBX1:0.642488603243;PAX3,7:0.630265219035;YY1:0.630041766244;ZNF143:0.616183763733;MYBL2:0.614523366372;HOX{A5,B5}:0.608027712929;NANOG{mouse}:0.597658551384;ELK1,4_GABP{A,B1}:0.583710720476;ZNF238:0.566078578554;RXRA_VDR{dimer}:0.562693008617;TAL1_TCF{3,4,12}:0.558892807911;MYOD1:0.550777952311;FOXP1:0.535660486138;NKX2-1,4:0.530973951865;ESRRA:0.500815571664;TFAP4:0.49635374791;EVI1:0.489507110682;SOX17:0.487359242711;PITX1..3:0.485856375715;PAX1,9:0.480253965187;PAX8:0.476003481809;HSF1,2:0.470107510629;AIRE:0.455045513664;TLX1..3_NFIC{dimer}:0.434681940415;CDC5L:0.430441156434;TOPORS:0.429964684219;STAT5{A,B}:0.420056282565;KLF4:0.41444882431;HOX{A4,D4}:0.408646965907;PDX1:0.391725286657;FOXL1:0.387474878987;NHLH1,2:0.362043464792;GLI1..3:0.360619537002;GCM1,2:0.337537667375;ESR1:0.336010503861;PAX5:0.311164413203;NR1H4:0.30357682823;NR5A1,2:0.300575719558;GATA4:0.299680743773;TBX4,5:0.294505185148;AHR_ARNT_ARNT2:0.278451206945;GTF2A1,2:0.26906572362;PAX4:0.252080025078;NRF1:0.23195881911;LEF1_TCF7_TCF7L1,2:0.2261011916;BACH2:0.223223499025;IKZF1:0.215934850815;POU2F1..3:0.214907162759;SPZ1:0.2097419897;HOXA9_MEIS1:0.202222334855;TFCP2:0.171241294962;CREB1:0.17006658915;SOX5:0.154744399361;NFIX:0.151866874506;XCPE1{core}:0.139298550944;XBP1:0.135717700805;EBF1:0.133669680096;MZF1:0.125001270312;FOS_FOS{B,L1}_JUN{B,D}:0.103402886715;ZIC1..3:0.0946058450638;TGIF1:0.0917563954619;NKX2-3_NKX2-5:0.0872804588065;NFE2L1:0.0642728875681;PRDM1:0.0606796403654;TP53:0.059049604221;T:0.0522697657942;ZNF384:0.0487736398818;TFAP2{A,C}:0.0480590919038;ONECUT1,2:0.0295461903724;GTF2I:0.0241484936689;HIC1:0.00555246087431;PRRX1,2:-0.0086081992453;FOSL2:-0.0167588769942;FOXD3:-0.0199312576963;AR:-0.0449752284634;HIF1A:-0.0618079386335;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0810592180071;ATF6:-0.0820207866852;HLF:-0.0850064716758;HNF1A:-0.106342913028;PATZ1:-0.106584459316;ZBTB16:-0.109002584704;CDX1,2,4:-0.113248431354;NFKB1_REL_RELA:-0.113511605471;EGR1..3:-0.114896908731;ELF1,2,4:-0.115153475819;ZNF148:-0.119805994171;ZFP161:-0.120158943427;RUNX1..3:-0.131121855727;POU6F1:-0.142678784409;ALX1:-0.158990686744;CEBPA,B_DDIT3:-0.166795619574;HNF4A_NR2F1,2:-0.178244409166;TFAP2B:-0.183848290457;NR6A1:-0.184525076667;SP1:-0.193751417456;STAT1,3:-0.193925663362;SOX{8,9,10}:-0.194209067461;MTE{core}:-0.198809288094;bHLH_family:-0.199570277042;LHX3,4:-0.204575835748;BREu{core}:-0.214393823848;MAZ:-0.218168276443;NFATC1..3:-0.223597054308;NFE2:-0.233135796183;TEF:-0.241233439293;HMGA1,2:-0.25474118938;SMAD1..7,9:-0.256396681266;FOXM1:-0.258053732817;ARID5B:-0.263896939117;RFX1:-0.273368963714;STAT2,4,6:-0.288197115191;NKX6-1,2:-0.295048457775;NFE2L2:-0.29534726387;JUN:-0.309815502232;ZBTB6:-0.311297259289;REST:-0.311302881468;RBPJ:-0.312955273453;MTF1:-0.31888655756;HAND1,2:-0.32931390684;NKX3-2:-0.332243798507;PAX6:-0.344916465546;CUX2:-0.346440832577;IKZF2:-0.346841173199;DMAP1_NCOR{1,2}_SMARC:-0.386152917033;PAX2:-0.390937914185;ZNF423:-0.393032508735;CRX:-0.394795685561;OCT4_SOX2{dimer}:-0.396067840496;PPARG:-0.39984073869;ATF4:-0.410216628792;ADNP_IRX_SIX_ZHX:-0.418917965476;MAFB:-0.419609197878;RREB1:-0.444897797101;LMO2:-0.445788001247;DBP:-0.450144425922;HMX1:-0.454219076472;NFIL3:-0.455384361058;MED-1{core}:-0.456569646526;SPI1:-0.463345617493;RFX2..5_RFXANK_RFXAP:-0.467986879457;SOX2:-0.484106857401;ATF5_CREB3:-0.508446940017;FOXP3:-0.529940152625;HBP1_HMGB_SSRP1_UBTF:-0.552474874685;MYFfamily:-0.571558275212;SPIB:-0.580744819707;VSX1,2:-0.587699836689;SNAI1..3:-0.604811249411;GATA6:-0.614338568025;ATF2:-0.615629224319;ETS1,2:-0.617818481246;FOXQ1:-0.644333076828;FOX{I1,J2}:-0.64466198261;HOX{A6,A7,B6,B7}:-0.667007983174;IRF1,2:-0.707661282964;FOXA2:-0.774290543499;POU5F1:-0.804815669203;FOXO1,3,4:-0.807864133645;BPTF:-0.808019101426;NANOG:-0.857215138796;FOX{F1,F2,J1}:-0.875636086563;IRF7:-0.883047983917;RORA:-0.920575421113;ZEB1:-0.986888450743;TLX2:-0.990491566916;EP300:-1.11438322851;FOXN1:-1.11663940804;SREBF1,2:-1.14100984833;FOX{D1,D2}:-1.17562531462 | |top_motifs=NKX3-1:1.32918982569;NR3C1:1.21715964299;TFDP1:1.21077742298;RXR{A,B,G}:1.1690623629;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15612512097;SRF:1.14437992248;E2F1..5:1.11715537782;POU3F1..4:1.07316271712;ALX4:1.06314440746;HES1:0.974545485156;POU1F1:0.947924912669;GFI1:0.947917551617;EN1,2:0.854857309452;GFI1B:0.797172530709;TEAD1:0.795231920816;UFEwm:0.794940581357;MEF2{A,B,C,D}:0.786410528187;NKX2-2,8:0.7184468274;MYB:0.695766193336;NFY{A,B,C}:0.667906682098;TBP:0.656115082885;GZF1:0.651558884071;PBX1:0.642488603243;PAX3,7:0.630265219035;YY1:0.630041766244;ZNF143:0.616183763733;MYBL2:0.614523366372;HOX{A5,B5}:0.608027712929;NANOG{mouse}:0.597658551384;ELK1,4_GABP{A,B1}:0.583710720476;ZNF238:0.566078578554;RXRA_VDR{dimer}:0.562693008617;TAL1_TCF{3,4,12}:0.558892807911;MYOD1:0.550777952311;FOXP1:0.535660486138;NKX2-1,4:0.530973951865;ESRRA:0.500815571664;TFAP4:0.49635374791;EVI1:0.489507110682;SOX17:0.487359242711;PITX1..3:0.485856375715;PAX1,9:0.480253965187;PAX8:0.476003481809;HSF1,2:0.470107510629;AIRE:0.455045513664;TLX1..3_NFIC{dimer}:0.434681940415;CDC5L:0.430441156434;TOPORS:0.429964684219;STAT5{A,B}:0.420056282565;KLF4:0.41444882431;HOX{A4,D4}:0.408646965907;PDX1:0.391725286657;FOXL1:0.387474878987;NHLH1,2:0.362043464792;GLI1..3:0.360619537002;GCM1,2:0.337537667375;ESR1:0.336010503861;PAX5:0.311164413203;NR1H4:0.30357682823;NR5A1,2:0.300575719558;GATA4:0.299680743773;TBX4,5:0.294505185148;AHR_ARNT_ARNT2:0.278451206945;GTF2A1,2:0.26906572362;PAX4:0.252080025078;NRF1:0.23195881911;LEF1_TCF7_TCF7L1,2:0.2261011916;BACH2:0.223223499025;IKZF1:0.215934850815;POU2F1..3:0.214907162759;SPZ1:0.2097419897;HOXA9_MEIS1:0.202222334855;TFCP2:0.171241294962;CREB1:0.17006658915;SOX5:0.154744399361;NFIX:0.151866874506;XCPE1{core}:0.139298550944;XBP1:0.135717700805;EBF1:0.133669680096;MZF1:0.125001270312;FOS_FOS{B,L1}_JUN{B,D}:0.103402886715;ZIC1..3:0.0946058450638;TGIF1:0.0917563954619;NKX2-3_NKX2-5:0.0872804588065;NFE2L1:0.0642728875681;PRDM1:0.0606796403654;TP53:0.059049604221;T:0.0522697657942;ZNF384:0.0487736398818;TFAP2{A,C}:0.0480590919038;ONECUT1,2:0.0295461903724;GTF2I:0.0241484936689;HIC1:0.00555246087431;PRRX1,2:-0.0086081992453;FOSL2:-0.0167588769942;FOXD3:-0.0199312576963;AR:-0.0449752284634;HIF1A:-0.0618079386335;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0810592180071;ATF6:-0.0820207866852;HLF:-0.0850064716758;HNF1A:-0.106342913028;PATZ1:-0.106584459316;ZBTB16:-0.109002584704;CDX1,2,4:-0.113248431354;NFKB1_REL_RELA:-0.113511605471;EGR1..3:-0.114896908731;ELF1,2,4:-0.115153475819;ZNF148:-0.119805994171;ZFP161:-0.120158943427;RUNX1..3:-0.131121855727;POU6F1:-0.142678784409;ALX1:-0.158990686744;CEBPA,B_DDIT3:-0.166795619574;HNF4A_NR2F1,2:-0.178244409166;TFAP2B:-0.183848290457;NR6A1:-0.184525076667;SP1:-0.193751417456;STAT1,3:-0.193925663362;SOX{8,9,10}:-0.194209067461;MTE{core}:-0.198809288094;bHLH_family:-0.199570277042;LHX3,4:-0.204575835748;BREu{core}:-0.214393823848;MAZ:-0.218168276443;NFATC1..3:-0.223597054308;NFE2:-0.233135796183;TEF:-0.241233439293;HMGA1,2:-0.25474118938;SMAD1..7,9:-0.256396681266;FOXM1:-0.258053732817;ARID5B:-0.263896939117;RFX1:-0.273368963714;STAT2,4,6:-0.288197115191;NKX6-1,2:-0.295048457775;NFE2L2:-0.29534726387;JUN:-0.309815502232;ZBTB6:-0.311297259289;REST:-0.311302881468;RBPJ:-0.312955273453;MTF1:-0.31888655756;HAND1,2:-0.32931390684;NKX3-2:-0.332243798507;PAX6:-0.344916465546;CUX2:-0.346440832577;IKZF2:-0.346841173199;DMAP1_NCOR{1,2}_SMARC:-0.386152917033;PAX2:-0.390937914185;ZNF423:-0.393032508735;CRX:-0.394795685561;OCT4_SOX2{dimer}:-0.396067840496;PPARG:-0.39984073869;ATF4:-0.410216628792;ADNP_IRX_SIX_ZHX:-0.418917965476;MAFB:-0.419609197878;RREB1:-0.444897797101;LMO2:-0.445788001247;DBP:-0.450144425922;HMX1:-0.454219076472;NFIL3:-0.455384361058;MED-1{core}:-0.456569646526;SPI1:-0.463345617493;RFX2..5_RFXANK_RFXAP:-0.467986879457;SOX2:-0.484106857401;ATF5_CREB3:-0.508446940017;FOXP3:-0.529940152625;HBP1_HMGB_SSRP1_UBTF:-0.552474874685;MYFfamily:-0.571558275212;SPIB:-0.580744819707;VSX1,2:-0.587699836689;SNAI1..3:-0.604811249411;GATA6:-0.614338568025;ATF2:-0.615629224319;ETS1,2:-0.617818481246;FOXQ1:-0.644333076828;FOX{I1,J2}:-0.64466198261;HOX{A6,A7,B6,B7}:-0.667007983174;IRF1,2:-0.707661282964;FOXA2:-0.774290543499;POU5F1:-0.804815669203;FOXO1,3,4:-0.807864133645;BPTF:-0.808019101426;NANOG:-0.857215138796;FOX{F1,F2,J1}:-0.875636086563;IRF7:-0.883047983917;RORA:-0.920575421113;ZEB1:-0.986888450743;TLX2:-0.990491566916;EP300:-1.11438322851;FOXN1:-1.11663940804;SREBF1,2:-1.14100984833;FOX{D1,D2}:-1.17562531462 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11459-119B1;search_select_hide=table117:FF:11459-119B1 | |||
}} | }} | ||
Latest revision as of 18:02, 4 June 2020
| Name: | Skeletal Muscle Cells, donor6 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12060 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12060
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12060
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.528 |
| 10 | 10 | 0.0895 |
| 100 | 100 | 0.097 |
| 101 | 101 | 0.201 |
| 102 | 102 | 0.624 |
| 103 | 103 | 0.183 |
| 104 | 104 | 0.584 |
| 105 | 105 | 0.572 |
| 106 | 106 | 0.00982 |
| 107 | 107 | 0.345 |
| 108 | 108 | 0.935 |
| 109 | 109 | 0.457 |
| 11 | 11 | 0.419 |
| 110 | 110 | 0.0293 |
| 111 | 111 | 0.456 |
| 112 | 112 | 0.0254 |
| 113 | 113 | 0.42 |
| 114 | 114 | 0.425 |
| 115 | 115 | 0.956 |
| 116 | 116 | 0.139 |
| 117 | 117 | 0.262 |
| 118 | 118 | 0.987 |
| 119 | 119 | 0.941 |
| 12 | 12 | 0.671 |
| 120 | 120 | 0.102 |
| 121 | 121 | 0.599 |
| 122 | 122 | 0.00924 |
| 123 | 123 | 0.434 |
| 124 | 124 | 0.187 |
| 125 | 125 | 0.297 |
| 126 | 126 | 0.665 |
| 127 | 127 | 0.56 |
| 128 | 128 | 0.0733 |
| 129 | 129 | 0.444 |
| 13 | 13 | 0.0514 |
| 130 | 130 | 0.0931 |
| 131 | 131 | 0.613 |
| 132 | 132 | 0.9 |
| 133 | 133 | 0.79 |
| 134 | 134 | 0.474 |
| 135 | 135 | 0.0417 |
| 136 | 136 | 0.853 |
| 137 | 137 | 0.0905 |
| 138 | 138 | 0.089 |
| 139 | 139 | 0.00994 |
| 14 | 14 | 0.107 |
| 140 | 140 | 0.152 |
| 141 | 141 | 0.856 |
| 142 | 142 | 0.406 |
| 143 | 143 | 0.55 |
| 144 | 144 | 0.762 |
| 145 | 145 | 0.503 |
| 146 | 146 | 0.909 |
| 147 | 147 | 0.337 |
| 148 | 148 | 0.669 |
| 149 | 149 | 0.868 |
| 15 | 15 | 0.319 |
| 150 | 150 | 0.34 |
| 151 | 151 | 0.699 |
| 152 | 152 | 0.857 |
| 153 | 153 | 0.538 |
| 154 | 154 | 0.702 |
| 155 | 155 | 0.0143 |
| 156 | 156 | 0.368 |
| 157 | 157 | 0.185 |
| 158 | 158 | 0.0251 |
| 159 | 159 | 0.237 |
| 16 | 16 | 0.581 |
| 160 | 160 | 0.215 |
| 161 | 161 | 0.812 |
| 162 | 162 | 0.572 |
| 163 | 163 | 0.948 |
| 164 | 164 | 0.419 |
| 165 | 165 | 0.0325 |
| 166 | 166 | 0.55 |
| 167 | 167 | 0.841 |
| 168 | 168 | 0.941 |
| 169 | 169 | 0.744 |
| 17 | 17 | 0.94 |
| 18 | 18 | 0.875 |
| 19 | 19 | 0.235 |
| 2 | 2 | 0.903 |
| 20 | 20 | 0.823 |
| 21 | 21 | 0.0302 |
| 22 | 22 | 0.954 |
| 23 | 23 | 0.0771 |
| 24 | 24 | 0.699 |
| 25 | 25 | 0.541 |
| 26 | 26 | 0.0933 |
| 27 | 27 | 0.398 |
| 28 | 28 | 0.175 |
| 29 | 29 | 0.656 |
| 3 | 3 | 0.739 |
| 30 | 30 | 0.736 |
| 31 | 31 | 0.507 |
| 32 | 32 | 0.0132 |
| 33 | 33 | 0.278 |
| 34 | 34 | 0.589 |
| 35 | 35 | 0.261 |
| 36 | 36 | 0.774 |
| 37 | 37 | 0.506 |
| 38 | 38 | 0.741 |
| 39 | 39 | 0.3 |
| 4 | 4 | 0.0932 |
| 40 | 40 | 0.555 |
| 41 | 41 | 0.0185 |
| 42 | 42 | 0.974 |
| 43 | 43 | 0.515 |
| 44 | 44 | 0.356 |
| 45 | 45 | 0.0574 |
| 46 | 46 | 0.989 |
| 47 | 47 | 0.549 |
| 48 | 48 | 0.421 |
| 49 | 49 | 0.455 |
| 5 | 5 | 0.197 |
| 50 | 50 | 0.148 |
| 51 | 51 | 0.996 |
| 52 | 52 | 0.151 |
| 53 | 53 | 0.614 |
| 54 | 54 | 0.671 |
| 55 | 55 | 0.558 |
| 56 | 56 | 0.855 |
| 57 | 57 | 0.481 |
| 58 | 58 | 0.0544 |
| 59 | 59 | 0.785 |
| 6 | 6 | 0.672 |
| 60 | 60 | 0.0324 |
| 61 | 61 | 0.688 |
| 62 | 62 | 0.151 |
| 63 | 63 | 0.731 |
| 64 | 64 | 0.559 |
| 65 | 65 | 0.707 |
| 66 | 66 | 0.314 |
| 67 | 67 | 0.847 |
| 68 | 68 | 0.76 |
| 69 | 69 | 0.922 |
| 7 | 7 | 0.644 |
| 70 | 70 | 0.00336 |
| 71 | 71 | 0.379 |
| 72 | 72 | 0.0286 |
| 73 | 73 | 0.248 |
| 74 | 74 | 0.991 |
| 75 | 75 | 0.704 |
| 76 | 76 | 0.565 |
| 77 | 77 | 0.78 |
| 78 | 78 | 0.97 |
| 79 | 79 | 0.318 |
| 8 | 8 | 0.189 |
| 80 | 80 | 0.0444 |
| 81 | 81 | 0.309 |
| 82 | 82 | 0.0103 |
| 83 | 83 | 0.966 |
| 84 | 84 | 0.956 |
| 85 | 85 | 0.0497 |
| 86 | 86 | 0.306 |
| 87 | 87 | 0.15 |
| 88 | 88 | 0.718 |
| 89 | 89 | 0.383 |
| 9 | 9 | 0.926 |
| 90 | 90 | 0.176 |
| 91 | 91 | 0.452 |
| 92 | 92 | 0.491 |
| 93 | 93 | 0.75 |
| 94 | 94 | 0.647 |
| 95 | 95 | 0.0541 |
| 96 | 96 | 0.568 |
| 97 | 97 | 0.808 |
| 98 | 98 | 0.312 |
| 99 | 99 | 9.34638e-4 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12060
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000188 (cell of skeletal muscle)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001134 (skeletal muscle tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0002204 (musculoskeletal system)
0000383 (musculature of body)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000162 (human skeletal muscle cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
