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{{f5samples
{{f5samples
|id=11580
|DRA_sample_Accession=CAGE@SAMD00004917
|name=Astrocyte - cerebellum, donor2
|accession_numbers=CAGE;DRX008113;DRR008985;DRZ000410;DRZ001795;DRZ011760;DRZ013145
|sample_id=FF:11580-120F5
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0002037,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002680,UBERON:0002616,UBERON:0004733,UBERON:0004732,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001895,UBERON:0002028
|rna_tube_id=120F5
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000095,CL:0000243,CL:0000128,CL:0000126,CL:0000125,CL:0000255,CL:0000127,CL:0002603
|rna_box=120
|rna_position=F5
|sample_cell_lot=N/A
|sample_cell_catalog=lot:4862
|sample_company=Sciencell/3H
|rna_lot_number=
|rna_catalog_number=SC1815
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=cerebellum
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.6
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=astrocyte
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=10
|rna_concentration=1.38
|sample_note=
|profile_hcage=CNhs12081,LSID838,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10005,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000030,CL:0000055,CL:0000095,CL:0000123,CL:0000125,CL:0000126,CL:0000127,CL:0000128,CL:0000133,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000243,CL:0000255,CL:0000333,CL:0000339,CL:0000548,CL:0002319,CL:0002321,CL:0002371,CL:0002453,CL:0002603
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001895,UBERON:0002028,UBERON:0002037,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002680,UBERON:0003057,UBERON:0003075,UBERON:0003076,UBERON:0004121,UBERON:0004732,UBERON:0004733,UBERON:0005068,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000195
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000127;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002319;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002603;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001895;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002028;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002037
|ffid_belonging_in_development=CL:0000133,CL:0000339,CL:0000221
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Astrocyte%2520-%2520cerebellum%252c%2520donor2.CNhs12081.11580-120F5.hg38.nobarcode.ctss.bed.gz
|id=FF:11580-120F5
|is_a=EFO:0002091;;FF:0000195
|is_obsolete=
|library_id=CNhs12081
|library_id_phase_based=2:CNhs12081
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11580
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11580
|name=Astrocyte - cerebellum, donor2
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12081,LSID838,release011,COMPLETED
|profile_rnaseq=
|profile_srnaseq=SRhi10005,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=120
|rna_catalog_number=SC1815
|rna_concentration=1.38
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=F5
|rna_rin=9.6
|rna_sample_type=total RNA
|rna_tube_id=120F5
|rna_weight_ug=10
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=lot:4862
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=astrocyte
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.774011855103e-220!GO:0043226;organelle;7.06528441120609e-180!GO:0043229;intracellular organelle;1.08565276724361e-179!GO:0043231;intracellular membrane-bound organelle;4.82655923670405e-179!GO:0043227;membrane-bound organelle;9.87771496244698e-179!GO:0005737;cytoplasm;4.13633773476822e-177!GO:0044422;organelle part;3.72728649608237e-130!GO:0044446;intracellular organelle part;5.49228676962478e-129!GO:0044444;cytoplasmic part;6.22899507288814e-123!GO:0032991;macromolecular complex;3.91683051991837e-85!GO:0044237;cellular metabolic process;4.80553873365117e-75!GO:0044238;primary metabolic process;3.11131709661023e-74!GO:0030529;ribonucleoprotein complex;1.04541075378387e-73!GO:0005515;protein binding;1.98831539973395e-72!GO:0005634;nucleus;9.2339818424429e-69!GO:0043170;macromolecule metabolic process;2.06497971668182e-68!GO:0005739;mitochondrion;1.17862405183082e-67!GO:0043233;organelle lumen;7.59468485530951e-62!GO:0031974;membrane-enclosed lumen;7.59468485530951e-62!GO:0044428;nuclear part;1.3581481386523e-57!GO:0003723;RNA binding;5.67384876498905e-52!GO:0031090;organelle membrane;1.913567516246e-49!GO:0005840;ribosome;2.95745829950264e-49!GO:0016043;cellular component organization and biogenesis;4.43969656619139e-48!GO:0044429;mitochondrial part;1.40629453690289e-46!GO:0003735;structural constituent of ribosome;1.01091911423792e-44!GO:0043234;protein complex;2.85320386747664e-43!GO:0043283;biopolymer metabolic process;8.02252421932375e-41!GO:0019538;protein metabolic process;9.0719531714614e-41!GO:0006412;translation;1.8178419721178e-40!GO:0031967;organelle envelope;7.56266778901551e-40!GO:0031975;envelope;1.94214041569424e-39!GO:0033279;ribosomal subunit;1.42951949852935e-38!GO:0009058;biosynthetic process;1.7316104069843e-38!GO:0044260;cellular macromolecule metabolic process;1.58650977764861e-36!GO:0044267;cellular protein metabolic process;5.51451594638477e-36!GO:0031981;nuclear lumen;1.17571738207534e-35!GO:0044249;cellular biosynthetic process;1.22206300391839e-35!GO:0006996;organelle organization and biogenesis;1.60477977900567e-35!GO:0006396;RNA processing;1.73163341245985e-34!GO:0015031;protein transport;3.04565670224594e-34!GO:0009059;macromolecule biosynthetic process;3.54771174622384e-34!GO:0033036;macromolecule localization;1.45351961703564e-33!GO:0010467;gene expression;4.15334490506177e-33!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.05929186690972e-33!GO:0005740;mitochondrial envelope;5.90930917669116e-32!GO:0005829;cytosol;6.55714367614963e-32!GO:0008104;protein localization;2.42811670604186e-31!GO:0045184;establishment of protein localization;4.00445037099441e-31!GO:0043228;non-membrane-bound organelle;6.21783154035239e-31!GO:0043232;intracellular non-membrane-bound organelle;6.21783154035239e-31!GO:0031966;mitochondrial membrane;3.71065909335732e-30!GO:0019866;organelle inner membrane;1.50435919555661e-29!GO:0046907;intracellular transport;2.10845335712912e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.25355678246137e-28!GO:0006259;DNA metabolic process;3.8951190623147e-28!GO:0005743;mitochondrial inner membrane;5.97036318510717e-28!GO:0065003;macromolecular complex assembly;7.75702364596621e-28!GO:0016071;mRNA metabolic process;1.97464977087097e-27!GO:0008380;RNA splicing;1.15954336818092e-25!GO:0022607;cellular component assembly;2.82627390812719e-25!GO:0006886;intracellular protein transport;4.12554711040179e-24!GO:0007049;cell cycle;3.53179020019008e-23!GO:0006397;mRNA processing;7.44688386039298e-23!GO:0005654;nucleoplasm;6.29929736880935e-22!GO:0044445;cytosolic part;1.12774393559082e-21!GO:0015934;large ribosomal subunit;2.93913019552976e-21!GO:0044455;mitochondrial membrane part;1.12762217366059e-20!GO:0006119;oxidative phosphorylation;4.45531571431168e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.78043370559899e-19!GO:0044451;nucleoplasm part;1.06016366835393e-18!GO:0022402;cell cycle process;2.00187637254995e-18!GO:0015935;small ribosomal subunit;2.06871592943089e-18!GO:0012505;endomembrane system;3.09654823185089e-18!GO:0005681;spliceosome;4.55319651934678e-18!GO:0031980;mitochondrial lumen;5.21287238123758e-18!GO:0005759;mitochondrial matrix;5.21287238123758e-18!GO:0003676;nucleic acid binding;9.07898553965958e-18!GO:0051649;establishment of cellular localization;9.99265664625055e-18!GO:0051641;cellular localization;1.54520125090343e-17!GO:0000278;mitotic cell cycle;8.47686374794892e-17!GO:0005783;endoplasmic reticulum;2.30474521601675e-16!GO:0005746;mitochondrial respiratory chain;2.64697520691039e-16!GO:0000166;nucleotide binding;3.68026463143507e-16!GO:0048770;pigment granule;4.14202014864613e-16!GO:0042470;melanosome;4.14202014864613e-16!GO:0051276;chromosome organization and biogenesis;8.29935431509191e-16!GO:0008134;transcription factor binding;1.11252634119084e-15!GO:0006457;protein folding;1.73117951072349e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.02670701900926e-15!GO:0003954;NADH dehydrogenase activity;2.02670701900926e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.02670701900926e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.42132738766614e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;3.17289736324475e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.48251475018092e-15!GO:0005794;Golgi apparatus;7.08236861251416e-15!GO:0051186;cofactor metabolic process;8.41743219778362e-15!GO:0016462;pyrophosphatase activity;1.30892650910456e-14!GO:0006512;ubiquitin cycle;1.52524355145279e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.64034893212317e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.92032206346377e-14!GO:0016874;ligase activity;1.9879085686876e-14!GO:0044432;endoplasmic reticulum part;2.41888155290711e-14!GO:0006323;DNA packaging;2.65678987023876e-14!GO:0017111;nucleoside-triphosphatase activity;5.52334675487562e-14!GO:0043412;biopolymer modification;7.36386689910136e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.5897228601733e-13!GO:0042773;ATP synthesis coupled electron transport;1.5897228601733e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.85695715244106e-13!GO:0005730;nucleolus;2.08610358559387e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.43501594443193e-13!GO:0045271;respiratory chain complex I;2.43501594443193e-13!GO:0005747;mitochondrial respiratory chain complex I;2.43501594443193e-13!GO:0005694;chromosome;2.4784382858205e-13!GO:0016070;RNA metabolic process;3.04510908009136e-13!GO:0005761;mitochondrial ribosome;3.43924846777029e-13!GO:0000313;organellar ribosome;3.43924846777029e-13!GO:0044427;chromosomal part;5.85097893264299e-13!GO:0044265;cellular macromolecule catabolic process;7.87995502886495e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.11513875105327e-13!GO:0022403;cell cycle phase;9.48094581177269e-13!GO:0006605;protein targeting;1.05560793791697e-12!GO:0006464;protein modification process;1.13398721704109e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.13104408427336e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;3.33810851617638e-12!GO:0000502;proteasome complex (sensu Eukaryota);3.76324652943315e-12!GO:0019941;modification-dependent protein catabolic process;4.24169075687122e-12!GO:0043632;modification-dependent macromolecule catabolic process;4.24169075687122e-12!GO:0006511;ubiquitin-dependent protein catabolic process;6.41593925319422e-12!GO:0044257;cellular protein catabolic process;6.79429960045286e-12!GO:0043285;biopolymer catabolic process;9.13435292986476e-12!GO:0006974;response to DNA damage stimulus;9.42593293908129e-12!GO:0009057;macromolecule catabolic process;3.42583285748659e-11!GO:0051726;regulation of cell cycle;3.68833924310657e-11!GO:0006732;coenzyme metabolic process;3.69430983859436e-11!GO:0051082;unfolded protein binding;4.38319310413115e-11!GO:0048193;Golgi vesicle transport;4.8545775440335e-11!GO:0032553;ribonucleotide binding;5.93444792425119e-11!GO:0032555;purine ribonucleotide binding;5.93444792425119e-11!GO:0007067;mitosis;5.95326821849762e-11!GO:0000074;regulation of progression through cell cycle;6.38083066729762e-11!GO:0000087;M phase of mitotic cell cycle;6.44328654706491e-11!GO:0044248;cellular catabolic process;7.82284328503016e-11!GO:0022618;protein-RNA complex assembly;8.01149904746224e-11!GO:0006333;chromatin assembly or disassembly;1.12057469364682e-10!GO:0030163;protein catabolic process;1.32496344463773e-10!GO:0017076;purine nucleotide binding;1.34367055487647e-10!GO:0065004;protein-DNA complex assembly;1.55186345598413e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;1.64381318473846e-10!GO:0000375;RNA splicing, via transesterification reactions;1.64381318473846e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.64381318473846e-10!GO:0043687;post-translational protein modification;1.82766979784781e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.95050621800488e-10!GO:0005789;endoplasmic reticulum membrane;2.43219869028657e-10!GO:0003712;transcription cofactor activity;3.69124144279081e-10!GO:0009055;electron carrier activity;3.94527853287065e-10!GO:0006260;DNA replication;4.49746812158975e-10!GO:0000785;chromatin;5.2124252652635e-10!GO:0005793;ER-Golgi intermediate compartment;6.43975466189314e-10!GO:0051301;cell division;7.51836930672735e-10!GO:0006281;DNA repair;7.70715508427154e-10!GO:0016192;vesicle-mediated transport;1.05324112596266e-09!GO:0006334;nucleosome assembly;1.06982963047889e-09!GO:0031497;chromatin assembly;1.58924431659123e-09!GO:0005524;ATP binding;2.35621833223734e-09!GO:0008135;translation factor activity, nucleic acid binding;2.66611107820171e-09!GO:0005635;nuclear envelope;2.89428285942359e-09!GO:0032559;adenyl ribonucleotide binding;3.93577192087863e-09!GO:0048523;negative regulation of cellular process;4.36286341570209e-09!GO:0031965;nuclear membrane;4.8502655023044e-09!GO:0050794;regulation of cellular process;7.22787191954134e-09!GO:0000279;M phase;9.16823419690465e-09!GO:0006366;transcription from RNA polymerase II promoter;9.4474690297817e-09!GO:0030554;adenyl nucleotide binding;1.16447880952774e-08!GO:0042254;ribosome biogenesis and assembly;1.44729229969734e-08!GO:0012501;programmed cell death;1.5241522786627e-08!GO:0009719;response to endogenous stimulus;1.65691138834215e-08!GO:0006913;nucleocytoplasmic transport;2.08233419178223e-08!GO:0006461;protein complex assembly;2.13019270469563e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.57113479785793e-08!GO:0006915;apoptosis;3.62288863580146e-08!GO:0051169;nuclear transport;4.24620144441212e-08!GO:0044453;nuclear membrane part;4.41325297852356e-08!GO:0008639;small protein conjugating enzyme activity;4.80676458623563e-08!GO:0051188;cofactor biosynthetic process;5.94707743484106e-08!GO:0016604;nuclear body;6.22094029124457e-08!GO:0006399;tRNA metabolic process;6.47078268451873e-08!GO:0016740;transferase activity;7.00660747216047e-08!GO:0008565;protein transporter activity;7.6218846305008e-08!GO:0009259;ribonucleotide metabolic process;7.94609045856863e-08!GO:0007005;mitochondrion organization and biogenesis;7.94609045856863e-08!GO:0016568;chromatin modification;8.69227001225182e-08!GO:0004842;ubiquitin-protein ligase activity;9.08246318938765e-08!GO:0006163;purine nucleotide metabolic process;9.16790362786479e-08!GO:0017038;protein import;9.41484312145507e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.60588664147264e-08!GO:0009150;purine ribonucleotide metabolic process;1.23741049379872e-07!GO:0008219;cell death;1.70885424353938e-07!GO:0016265;death;1.70885424353938e-07!GO:0048519;negative regulation of biological process;2.02659449659254e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.12160584739759e-07!GO:0015630;microtubule cytoskeleton;2.26399149260903e-07!GO:0019787;small conjugating protein ligase activity;2.48963726398345e-07!GO:0051329;interphase of mitotic cell cycle;3.11315648221891e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.95956333994151e-07!GO:0065002;intracellular protein transport across a membrane;3.9670040164337e-07!GO:0009060;aerobic respiration;4.24028763563783e-07!GO:0006164;purine nucleotide biosynthetic process;5.49778561896609e-07!GO:0044431;Golgi apparatus part;6.42318924710788e-07!GO:0009141;nucleoside triphosphate metabolic process;6.53669379396959e-07!GO:0051325;interphase;6.98340893941592e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.15090479399424e-07!GO:0030120;vesicle coat;7.31390066018987e-07!GO:0030662;coated vesicle membrane;7.31390066018987e-07!GO:0009152;purine ribonucleotide biosynthetic process;7.37238318719582e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.53250632143495e-07!GO:0005667;transcription factor complex;7.53250632143495e-07!GO:0009260;ribonucleotide biosynthetic process;8.67318330157965e-07!GO:0003743;translation initiation factor activity;8.91906926145095e-07!GO:0042623;ATPase activity, coupled;9.21269381509466e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.0026979991016e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.0026979991016e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.0026979991016e-06!GO:0045786;negative regulation of progression through cell cycle;1.02140576882544e-06!GO:0050789;regulation of biological process;1.08075345983946e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.20674583322841e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.20674583322841e-06!GO:0005768;endosome;1.37333726071411e-06!GO:0045333;cellular respiration;1.47272918094806e-06!GO:0005643;nuclear pore;1.51470445840315e-06!GO:0016881;acid-amino acid ligase activity;1.90698653198012e-06!GO:0006446;regulation of translational initiation;1.90698653198012e-06!GO:0015986;ATP synthesis coupled proton transport;1.91744137237552e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.91744137237552e-06!GO:0016049;cell growth;2.00221394921551e-06!GO:0003924;GTPase activity;2.03756829313729e-06!GO:0008361;regulation of cell size;2.37619208636355e-06!GO:0016887;ATPase activity;2.37619208636355e-06!GO:0045259;proton-transporting ATP synthase complex;2.55791717942095e-06!GO:0006413;translational initiation;2.62516816325437e-06!GO:0031324;negative regulation of cellular metabolic process;2.65809676040691e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.05132285593167e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.05132285593167e-06!GO:0043038;amino acid activation;3.36974829922862e-06!GO:0006418;tRNA aminoacylation for protein translation;3.36974829922862e-06!GO:0043039;tRNA aminoacylation;3.36974829922862e-06!GO:0048475;coated membrane;3.69930941048389e-06!GO:0030117;membrane coat;3.69930941048389e-06!GO:0006793;phosphorus metabolic process;3.83739050767271e-06!GO:0006796;phosphate metabolic process;3.83739050767271e-06!GO:0006364;rRNA processing;4.19770015601586e-06!GO:0016607;nuclear speck;4.2550702696706e-06!GO:0005762;mitochondrial large ribosomal subunit;4.84861737837234e-06!GO:0000315;organellar large ribosomal subunit;4.84861737837234e-06!GO:0031252;leading edge;5.13782819791182e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.17104051316899e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.17104051316899e-06!GO:0005839;proteasome core complex (sensu Eukaryota);5.61570839145576e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.94501718878374e-06!GO:0046034;ATP metabolic process;6.08456724818644e-06!GO:0009056;catabolic process;6.16289822127575e-06!GO:0005788;endoplasmic reticulum lumen;6.85046177638113e-06!GO:0009117;nucleotide metabolic process;8.03718980205207e-06!GO:0015078;hydrogen ion transmembrane transporter activity;8.28105281930472e-06!GO:0006099;tricarboxylic acid cycle;8.75971925317607e-06!GO:0046356;acetyl-CoA catabolic process;8.75971925317607e-06!GO:0003697;single-stranded DNA binding;1.0768260022637e-05!GO:0016072;rRNA metabolic process;1.1675232840587e-05!GO:0001558;regulation of cell growth;1.18220120562911e-05!GO:0019829;cation-transporting ATPase activity;1.21082969679034e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.24862034053504e-05!GO:0009108;coenzyme biosynthetic process;1.25477312518721e-05!GO:0043067;regulation of programmed cell death;1.40205524463759e-05!GO:0016564;transcription repressor activity;1.43503722214358e-05!GO:0046930;pore complex;1.48490538441208e-05!GO:0016853;isomerase activity;1.60588490789642e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.61464595284758e-05!GO:0042981;regulation of apoptosis;1.64186939744563e-05!GO:0003714;transcription corepressor activity;1.81735117816318e-05!GO:0006084;acetyl-CoA metabolic process;1.91928281553621e-05!GO:0016779;nucleotidyltransferase activity;1.9287161593164e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.9791673882554e-05!GO:0008654;phospholipid biosynthetic process;2.01467378998088e-05!GO:0016491;oxidoreductase activity;2.05900057025866e-05!GO:0043623;cellular protein complex assembly;2.07030563059816e-05!GO:0000139;Golgi membrane;2.20003347356931e-05!GO:0005905;coated pit;2.24803480632081e-05!GO:0006754;ATP biosynthetic process;2.42738837166541e-05!GO:0006753;nucleoside phosphate metabolic process;2.42738837166541e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.92215662065741e-05!GO:0032446;protein modification by small protein conjugation;3.01279068731198e-05!GO:0016563;transcription activator activity;3.2305389035979e-05!GO:0016310;phosphorylation;3.24537126808218e-05!GO:0000786;nucleosome;3.26451212142487e-05!GO:0009892;negative regulation of metabolic process;3.28961113505269e-05!GO:0044440;endosomal part;3.71748718434396e-05!GO:0010008;endosome membrane;3.71748718434396e-05!GO:0007010;cytoskeleton organization and biogenesis;4.00940507727352e-05!GO:0003713;transcription coactivator activity;4.12281288530258e-05!GO:0016481;negative regulation of transcription;4.23370040780005e-05!GO:0004298;threonine endopeptidase activity;4.3632306821783e-05!GO:0009109;coenzyme catabolic process;4.39728742323279e-05!GO:0016567;protein ubiquitination;4.48452641686215e-05!GO:0019899;enzyme binding;4.58840904391776e-05!GO:0051427;hormone receptor binding;4.61490032495799e-05!GO:0003899;DNA-directed RNA polymerase activity;4.68472918779506e-05!GO:0016023;cytoplasmic membrane-bound vesicle;4.9613830657354e-05!GO:0004386;helicase activity;5.5629614606667e-05!GO:0000151;ubiquitin ligase complex;5.82245086166004e-05!GO:0006916;anti-apoptosis;5.82245086166004e-05!GO:0043566;structure-specific DNA binding;5.88782036482727e-05!GO:0000245;spliceosome assembly;6.50234478411565e-05!GO:0031988;membrane-bound vesicle;6.68666274722889e-05!GO:0006752;group transfer coenzyme metabolic process;6.73041034656846e-05!GO:0051187;cofactor catabolic process;6.76328769742501e-05!GO:0006606;protein import into nucleus;6.94890220068897e-05!GO:0051170;nuclear import;7.76296184417505e-05!GO:0035257;nuclear hormone receptor binding;9.41966663972848e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.45779606475438e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000104929263250075!GO:0008026;ATP-dependent helicase activity;0.000113720863640642!GO:0043069;negative regulation of programmed cell death;0.000133727723031092!GO:0006403;RNA localization;0.000160732668324591!GO:0030867;rough endoplasmic reticulum membrane;0.000163506555660512!GO:0051246;regulation of protein metabolic process;0.000163834023234342!GO:0050657;nucleic acid transport;0.000171034564330452!GO:0051236;establishment of RNA localization;0.000171034564330452!GO:0050658;RNA transport;0.000171034564330452!GO:0015980;energy derivation by oxidation of organic compounds;0.000174086969507824!GO:0005819;spindle;0.000189034584809239!GO:0045454;cell redox homeostasis;0.000192579239630259!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000193007163789561!GO:0030036;actin cytoskeleton organization and biogenesis;0.000193165710250232!GO:0043066;negative regulation of apoptosis;0.00021433962804869!GO:0033116;ER-Golgi intermediate compartment membrane;0.000223112416369608!GO:0005770;late endosome;0.000223942814060766!GO:0040008;regulation of growth;0.000256188733516829!GO:0016859;cis-trans isomerase activity;0.000284649509286527!GO:0005798;Golgi-associated vesicle;0.00029778700339184!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000303102498329032!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000352124299921072!GO:0005813;centrosome;0.00035667222464459!GO:0030133;transport vesicle;0.000364141756606536!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000369218357775626!GO:0031982;vesicle;0.000394756291124316!GO:0031410;cytoplasmic vesicle;0.000425014672085574!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000449869387573149!GO:0000314;organellar small ribosomal subunit;0.000454856049789934!GO:0005763;mitochondrial small ribosomal subunit;0.000454856049789934!GO:0005773;vacuole;0.000513020120245945!GO:0005791;rough endoplasmic reticulum;0.000515115400092374!GO:0046474;glycerophospholipid biosynthetic process;0.000521276215975667!GO:0030176;integral to endoplasmic reticulum membrane;0.000534200059454471!GO:0006091;generation of precursor metabolites and energy;0.00058068939627086!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000654832822577981!GO:0005815;microtubule organizing center;0.000654985623318994!GO:0005525;GTP binding;0.000678970888075318!GO:0005769;early endosome;0.00068605750959185!GO:0044262;cellular carbohydrate metabolic process;0.000686132878684674!GO:0048522;positive regulation of cellular process;0.000717114129843948!GO:0006839;mitochondrial transport;0.000826501828229662!GO:0006626;protein targeting to mitochondrion;0.000841961765885735!GO:0005874;microtubule;0.000852455589588799!GO:0030132;clathrin coat of coated pit;0.00085612910719928!GO:0008250;oligosaccharyl transferase complex;0.000874894929910712!GO:0030029;actin filament-based process;0.000880004980341875!GO:0007006;mitochondrial membrane organization and biogenesis;0.000910361814348103!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000930046991655366!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000957467428784629!GO:0043681;protein import into mitochondrion;0.000961293314693741!GO:0008092;cytoskeletal protein binding;0.000962561146070782!GO:0005048;signal sequence binding;0.000998571157433848!GO:0019843;rRNA binding;0.00108349800884621!GO:0046467;membrane lipid biosynthetic process;0.00118843207437033!GO:0006613;cotranslational protein targeting to membrane;0.00124690851362788!GO:0031968;organelle outer membrane;0.00129021982396051!GO:0019867;outer membrane;0.00137863894207836!GO:0006414;translational elongation;0.00139625228477032!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00143245596007766!GO:0006261;DNA-dependent DNA replication;0.0014348145464695!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00146372164511459!GO:0007264;small GTPase mediated signal transduction;0.00146372164511459!GO:0008610;lipid biosynthetic process;0.00151820868248721!GO:0003684;damaged DNA binding;0.00153261684502006!GO:0051789;response to protein stimulus;0.00160447612714138!GO:0006986;response to unfolded protein;0.00160447612714138!GO:0051028;mRNA transport;0.00166183909208398!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00167464664914102!GO:0051920;peroxiredoxin activity;0.00171173261124195!GO:0005741;mitochondrial outer membrane;0.00178084931710497!GO:0016126;sterol biosynthetic process;0.00182932246224315!GO:0048471;perinuclear region of cytoplasm;0.00186918787939084!GO:0016787;hydrolase activity;0.0019129261661996!GO:0045892;negative regulation of transcription, DNA-dependent;0.00196971418715074!GO:0030118;clathrin coat;0.00198247219491274!GO:0005885;Arp2/3 protein complex;0.00210547775044075!GO:0018196;peptidyl-asparagine modification;0.00226858667041464!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00226858667041464!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00228425615637378!GO:0008286;insulin receptor signaling pathway;0.0023133078845912!GO:0007243;protein kinase cascade;0.00239631051208631!GO:0019222;regulation of metabolic process;0.00242228980718779!GO:0065009;regulation of a molecular function;0.0024516246402159!GO:0030027;lamellipodium;0.00254035440907339!GO:0042802;identical protein binding;0.00254334923622195!GO:0016044;membrane organization and biogenesis;0.00257953640041836!GO:0008094;DNA-dependent ATPase activity;0.0025925046445503!GO:0000075;cell cycle checkpoint;0.00259532330252536!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00262044695374556!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00262044695374556!GO:0000323;lytic vacuole;0.00300683400135531!GO:0005764;lysosome;0.00300683400135531!GO:0065007;biological regulation;0.0030275802030086!GO:0032561;guanyl ribonucleotide binding;0.00310325746865677!GO:0019001;guanyl nucleotide binding;0.00310325746865677!GO:0004576;oligosaccharyl transferase activity;0.00312780914212866!GO:0046489;phosphoinositide biosynthetic process;0.0031526303584549!GO:0043284;biopolymer biosynthetic process;0.00317640494063848!GO:0007051;spindle organization and biogenesis;0.00340004417392589!GO:0045941;positive regulation of transcription;0.00341315267505691!GO:0007050;cell cycle arrest;0.00341315267505691!GO:0005684;U2-dependent spliceosome;0.00345346318304796!GO:0001726;ruffle;0.00348443380080133!GO:0043488;regulation of mRNA stability;0.00350345149746348!GO:0043487;regulation of RNA stability;0.00350345149746348!GO:0007346;regulation of progression through mitotic cell cycle;0.00355396538051723!GO:0000902;cell morphogenesis;0.00359771987207256!GO:0032989;cellular structure morphogenesis;0.00359771987207256!GO:0030880;RNA polymerase complex;0.00366576611324862!GO:0043021;ribonucleoprotein binding;0.00371071146601804!GO:0005657;replication fork;0.00379178242522355!GO:0017166;vinculin binding;0.00386202285662974!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00395499920953892!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00395499920953892!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00395499920953892!GO:0006740;NADPH regeneration;0.00413049307984683!GO:0006098;pentose-phosphate shunt;0.00413049307984683!GO:0009165;nucleotide biosynthetic process;0.00414868893984707!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00443914191803755!GO:0006595;polyamine metabolic process;0.00453420356356975!GO:0045893;positive regulation of transcription, DNA-dependent;0.00457803951423166!GO:0016363;nuclear matrix;0.004643806852167!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00466738714643146!GO:0035258;steroid hormone receptor binding;0.00468892773223036!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00476229388354976!GO:0000775;chromosome, pericentric region;0.00476788791879769!GO:0008033;tRNA processing;0.0048329344937402!GO:0000082;G1/S transition of mitotic cell cycle;0.00483377532982401!GO:0006779;porphyrin biosynthetic process;0.00484545720899164!GO:0033014;tetrapyrrole biosynthetic process;0.00484545720899164!GO:0031072;heat shock protein binding;0.00499522998472777!GO:0030658;transport vesicle membrane;0.00507984006459649!GO:0003682;chromatin binding;0.00510691905502655!GO:0048468;cell development;0.00560240437941258!GO:0051168;nuclear export;0.00561135097365421!GO:0006402;mRNA catabolic process;0.00565475215449825!GO:0003724;RNA helicase activity;0.00579271837329697!GO:0006695;cholesterol biosynthetic process;0.00594473767740424!GO:0051101;regulation of DNA binding;0.00627685168749648!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00639538494101603!GO:0015399;primary active transmembrane transporter activity;0.00639538494101603!GO:0006778;porphyrin metabolic process;0.00650347834304431!GO:0033013;tetrapyrrole metabolic process;0.00650347834304431!GO:0030119;AP-type membrane coat adaptor complex;0.00682728537918883!GO:0051252;regulation of RNA metabolic process;0.00707185927594725!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00707185927594725!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00715465733461063!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00742786976436344!GO:0040029;regulation of gene expression, epigenetic;0.00743717528793043!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00747812527064029!GO:0003678;DNA helicase activity;0.00806165472417264!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00837535290457026!GO:0000428;DNA-directed RNA polymerase complex;0.00837535290457026!GO:0016569;covalent chromatin modification;0.00845782522371854!GO:0008168;methyltransferase activity;0.00872951466332546!GO:0031902;late endosome membrane;0.00880849177100465!GO:0016741;transferase activity, transferring one-carbon groups;0.00894719097722216!GO:0000084;S phase of mitotic cell cycle;0.00912374237157465!GO:0048487;beta-tubulin binding;0.00928697616117529!GO:0032508;DNA duplex unwinding;0.00947153278419642!GO:0032392;DNA geometric change;0.00947153278419642!GO:0030663;COPI coated vesicle membrane;0.00947526157717664!GO:0030126;COPI vesicle coat;0.00947526157717664!GO:0030131;clathrin adaptor complex;0.00961874153013992!GO:0030125;clathrin vesicle coat;0.00984459659235044!GO:0030665;clathrin coated vesicle membrane;0.00984459659235044!GO:0006509;membrane protein ectodomain proteolysis;0.0102428129592379!GO:0033619;membrane protein proteolysis;0.0102428129592379!GO:0016197;endosome transport;0.0102684725247299!GO:0033673;negative regulation of kinase activity;0.0104411187483804!GO:0006469;negative regulation of protein kinase activity;0.0104411187483804!GO:0007265;Ras protein signal transduction;0.0104411187483804!GO:0003729;mRNA binding;0.0104411187483804!GO:0000059;protein import into nucleus, docking;0.0104709648806429!GO:0031301;integral to organelle membrane;0.0106085990210031!GO:0030308;negative regulation of cell growth;0.0108997241970137!GO:0016272;prefoldin complex;0.0108997241970137!GO:0006979;response to oxidative stress;0.0109194288264825!GO:0051348;negative regulation of transferase activity;0.0111866821183883!GO:0000118;histone deacetylase complex;0.0113652447977397!GO:0006383;transcription from RNA polymerase III promoter;0.011425394969833!GO:0045792;negative regulation of cell size;0.0115034572393107!GO:0030134;ER to Golgi transport vesicle;0.0115034572393107!GO:0008139;nuclear localization sequence binding;0.0115603888797846!GO:0042158;lipoprotein biosynthetic process;0.0121927156056275!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0124972628864487!GO:0045936;negative regulation of phosphate metabolic process;0.0125571171908431!GO:0030521;androgen receptor signaling pathway;0.0130782006255442!GO:0004674;protein serine/threonine kinase activity;0.0132439039089862!GO:0030137;COPI-coated vesicle;0.0132913634804277!GO:0006783;heme biosynthetic process;0.0137831944294323!GO:0006497;protein amino acid lipidation;0.0139457457462179!GO:0030660;Golgi-associated vesicle membrane;0.0139905675987115!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0139905675987115!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0140779394816099!GO:0015002;heme-copper terminal oxidase activity;0.0140779394816099!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0140779394816099!GO:0004129;cytochrome-c oxidase activity;0.0140779394816099!GO:0015631;tubulin binding;0.0141727112100444!GO:0051098;regulation of binding;0.0143251549971882!GO:0006520;amino acid metabolic process;0.0145534402728994!GO:0008047;enzyme activator activity;0.0146458174926763!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0148736913079838!GO:0005862;muscle thin filament tropomyosin;0.0154301139808975!GO:0006891;intra-Golgi vesicle-mediated transport;0.0157782992866064!GO:0006289;nucleotide-excision repair;0.0161268070723278!GO:0030659;cytoplasmic vesicle membrane;0.0161833506658302!GO:0005637;nuclear inner membrane;0.0163915637345126!GO:0006268;DNA unwinding during replication;0.0164095795432608!GO:0016570;histone modification;0.0164901821793088!GO:0005869;dynactin complex;0.0166428533324813!GO:0044452;nucleolar part;0.0166874708013982!GO:0000792;heterochromatin;0.0169027272871012!GO:0007040;lysosome organization and biogenesis;0.0174466841421246!GO:0006284;base-excision repair;0.0177325930241933!GO:0046870;cadmium ion binding;0.0177611611440381!GO:0042168;heme metabolic process;0.0179211420580085!GO:0006612;protein targeting to membrane;0.0184399996510726!GO:0008632;apoptotic program;0.0184452746239472!GO:0030127;COPII vesicle coat;0.0187021782385713!GO:0012507;ER to Golgi transport vesicle membrane;0.0187021782385713!GO:0046519;sphingoid metabolic process;0.0191291371942176!GO:0006220;pyrimidine nucleotide metabolic process;0.0193282253767065!GO:0008637;apoptotic mitochondrial changes;0.0202859564053719!GO:0003711;transcription elongation regulator activity;0.0202859564053719!GO:0006650;glycerophospholipid metabolic process;0.0205632439090417!GO:0045334;clathrin-coated endocytic vesicle;0.0209296092466782!GO:0048518;positive regulation of biological process;0.0210020905256185!GO:0043414;biopolymer methylation;0.0210020905256185!GO:0003746;translation elongation factor activity;0.0215472525302762!GO:0030041;actin filament polymerization;0.0215758760255357!GO:0006082;organic acid metabolic process;0.0217633990181488!GO:0046483;heterocycle metabolic process;0.0217732186287458!GO:0051287;NAD binding;0.0217996293936837!GO:0007088;regulation of mitosis;0.0221006525697094!GO:0006506;GPI anchor biosynthetic process;0.0221021579771709!GO:0046426;negative regulation of JAK-STAT cascade;0.0222283395607821!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0223708244366081!GO:0008186;RNA-dependent ATPase activity;0.0228949834974299!GO:0006338;chromatin remodeling;0.0236721546357162!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0236721546357162!GO:0010257;NADH dehydrogenase complex assembly;0.0236721546357162!GO:0033108;mitochondrial respiratory chain complex assembly;0.0236721546357162!GO:0019752;carboxylic acid metabolic process;0.0240846817916049!GO:0019206;nucleoside kinase activity;0.0243164697112874!GO:0007033;vacuole organization and biogenesis;0.0246758397760771!GO:0045926;negative regulation of growth;0.0252097652148164!GO:0000910;cytokinesis;0.0252417927375627!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.025247450008527!GO:0008629;induction of apoptosis by intracellular signals;0.025247450008527!GO:0016860;intramolecular oxidoreductase activity;0.0254666724237578!GO:0016311;dephosphorylation;0.0258785637416441!GO:0051087;chaperone binding;0.0259084240534969!GO:0016301;kinase activity;0.0260152157445235!GO:0051539;4 iron, 4 sulfur cluster binding;0.0260948133830223!GO:0031529;ruffle organization and biogenesis;0.0261342564403331!GO:0006611;protein export from nucleus;0.0265692245985317!GO:0015992;proton transport;0.0269134705639368!GO:0050790;regulation of catalytic activity;0.0270180834808217!GO:0006818;hydrogen transport;0.0274573496087531!GO:0008287;protein serine/threonine phosphatase complex;0.0275243960111448!GO:0000123;histone acetyltransferase complex;0.027570217634956!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0277502737020993!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0279516816741987!GO:0006739;NADP metabolic process;0.0279516816741987!GO:0030128;clathrin coat of endocytic vesicle;0.0284655203713416!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0284655203713416!GO:0030122;AP-2 adaptor complex;0.0284655203713416!GO:0006352;transcription initiation;0.0286791215109533!GO:0005774;vacuolar membrane;0.0286791215109533!GO:0033559;unsaturated fatty acid metabolic process;0.0286791215109533!GO:0006636;unsaturated fatty acid biosynthetic process;0.0286791215109533!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0289012109723268!GO:0006505;GPI anchor metabolic process;0.0293006654618098!GO:0004860;protein kinase inhibitor activity;0.0305275605916163!GO:0008538;proteasome activator activity;0.0306780775795844!GO:0042326;negative regulation of phosphorylation;0.0312619686256545!GO:0008213;protein amino acid alkylation;0.0315399756125312!GO:0006479;protein amino acid methylation;0.0315399756125312!GO:0008652;amino acid biosynthetic process;0.0315519654859779!GO:0006672;ceramide metabolic process;0.0317352855687425!GO:0006401;RNA catabolic process;0.0318903085168572!GO:0031124;mRNA 3'-end processing;0.0322169002354809!GO:0000049;tRNA binding;0.0323525912224335!GO:0004003;ATP-dependent DNA helicase activity;0.0323683753871528!GO:0044433;cytoplasmic vesicle part;0.0330293677563329!GO:0004177;aminopeptidase activity;0.0332495635871462!GO:0005096;GTPase activator activity;0.0345811430563235!GO:0009303;rRNA transcription;0.0346136934366858!GO:0030031;cell projection biogenesis;0.0349489310937693!GO:0009966;regulation of signal transduction;0.0356887158251044!GO:0030433;ER-associated protein catabolic process;0.0356934102593686!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0356934102593686!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0358383369589714!GO:0046822;regulation of nucleocytoplasmic transport;0.0360181877835649!GO:0030032;lamellipodium biogenesis;0.0361934385122864!GO:0050178;phenylpyruvate tautomerase activity;0.0361934385122864!GO:0006350;transcription;0.0363562661141869!GO:0030145;manganese ion binding;0.0365051581099424!GO:0005100;Rho GTPase activator activity;0.03690462538003!GO:0022890;inorganic cation transmembrane transporter activity;0.03690462538003!GO:0032259;methylation;0.0369899230784548!GO:0050662;coenzyme binding;0.0371901027046675!GO:0030508;thiol-disulfide exchange intermediate activity;0.0374054428321562!GO:0043189;H4/H2A histone acetyltransferase complex;0.0374320479620752!GO:0006790;sulfur metabolic process;0.0374320479620752!GO:0007021;tubulin folding;0.0378459962333724!GO:0051128;regulation of cellular component organization and biogenesis;0.0382014210231532!GO:0031323;regulation of cellular metabolic process;0.0383092367596557!GO:0030384;phosphoinositide metabolic process;0.0391551504503369!GO:0005996;monosaccharide metabolic process;0.0391551504503369!GO:0006007;glucose catabolic process;0.0391551504503369!GO:0051540;metal cluster binding;0.0393406918050235!GO:0051536;iron-sulfur cluster binding;0.0393406918050235!GO:0000086;G2/M transition of mitotic cell cycle;0.0393406918050235!GO:0019318;hexose metabolic process;0.0400957883999702!GO:0003690;double-stranded DNA binding;0.0402122138513125!GO:0031901;early endosome membrane;0.040376017062765!GO:0003756;protein disulfide isomerase activity;0.040376017062765!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.040376017062765!GO:0032906;transforming growth factor-beta2 production;0.040376017062765!GO:0032909;regulation of transforming growth factor-beta2 production;0.040376017062765!GO:0035267;NuA4 histone acetyltransferase complex;0.0405093946403624!GO:0008022;protein C-terminus binding;0.041721779803392!GO:0051338;regulation of transferase activity;0.0420160049929328!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0426310375432976!GO:0043433;negative regulation of transcription factor activity;0.0434960301290674!GO:0000096;sulfur amino acid metabolic process;0.0435720706725874!GO:0051320;S phase;0.0436639517264264!GO:0008320;protein transmembrane transporter activity;0.0443817764522495!GO:0030518;steroid hormone receptor signaling pathway;0.0444060383902132!GO:0022884;macromolecule transmembrane transporter activity;0.0444979294737101!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0444979294737101!GO:0051059;NF-kappaB binding;0.0445819173518493!GO:0007017;microtubule-based process;0.0448387190835742!GO:0009081;branched chain family amino acid metabolic process;0.0458492121277271!GO:0030911;TPR domain binding;0.0458492121277271!GO:0048500;signal recognition particle;0.0459508201874748!GO:0043492;ATPase activity, coupled to movement of substances;0.0459508201874748!GO:0018193;peptidyl-amino acid modification;0.0460442946466824!GO:0006458;'de novo' protein folding;0.0464386437830243!GO:0051084;'de novo' posttranslational protein folding;0.0464386437830243!GO:0006733;oxidoreduction coenzyme metabolic process;0.0474751416105249!GO:0004004;ATP-dependent RNA helicase activity;0.0474751416105249!GO:0016584;nucleosome positioning;0.0474751416105249!GO:0004364;glutathione transferase activity;0.0474967525493814!GO:0006643;membrane lipid metabolic process;0.0484445835828265!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0490813490325898!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0491298770788658!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0493353085945395!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0497681009979619
|sample_id=11580
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=cerebellum
|top_motifs=ZIC1..3:1.86297544115;EBF1:1.80159451945;GTF2A1,2:1.6725788926;TFAP2{A,C}:1.64571854176;XCPE1{core}:1.51902160459;GZF1:1.3728093475;RXR{A,B,G}:1.26638888065;PBX1:1.23914219453;ZNF423:1.13429881838;TFAP4:1.0854478286;TFAP2B:1.08092906378;SP1:1.0452340403;GFI1:1.03898768192;ESR1:0.957396061101;ESRRA:0.915262927967;SOX{8,9,10}:0.910221939894;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.881708671774;ZNF148:0.881384119756;MZF1:0.855997514171;PAX1,9:0.84716680372;TEAD1:0.844689322218;RXRA_VDR{dimer}:0.83820766095;LEF1_TCF7_TCF7L1,2:0.835964780369;TLX1..3_NFIC{dimer}:0.803200449351;MTF1:0.797909941234;SPZ1:0.76168256711;POU2F1..3:0.712435231569;TFCP2:0.71198338702;RREB1:0.711510074663;NR6A1:0.691507779612;ZBTB6:0.684084269195;TAL1_TCF{3,4,12}:0.641022091794;HIC1:0.640057834274;LHX3,4:0.639130050119;GTF2I:0.614634891175;NR5A1,2:0.61451682199;PATZ1:0.592689471682;HES1:0.588301588258;NFY{A,B,C}:0.57970383367;E2F1..5:0.566237656946;TFDP1:0.561383023293;HMX1:0.547439879994;PAX5:0.547213050511;HOX{A5,B5}:0.541099992012;TP53:0.508526286497;MTE{core}:0.497702992561;MAZ:0.478320708491;KLF4:0.463895837972;SMAD1..7,9:0.45108939148;HNF4A_NR2F1,2:0.435427054837;GLI1..3:0.415625019226;NR3C1:0.406968704495;PPARG:0.385092800994;SRF:0.373323500315;POU5F1:0.365711183907;NKX2-3_NKX2-5:0.353641186414;SOX17:0.351385042419;ZNF143:0.348471820079;ONECUT1,2:0.337119935512;IKZF1:0.307117421398;bHLH_family:0.301336163962;UFEwm:0.298129691477;GFI1B:0.285133930374;TOPORS:0.281184520644;BREu{core}:0.278946275296;NHLH1,2:0.258862715182;NFE2L1:0.243338039739;EN1,2:0.224059796556;TBX4,5:0.220199027598;YY1:0.220056266371;TBP:0.21873974165;REST:0.209921965221;NR1H4:0.209574804663;MED-1{core}:0.190085271271;AR:0.188715493672;GCM1,2:0.185829108205;ZNF238:0.178568430977;ZFP161:0.152478887468;NKX2-2,8:0.144140252938;EGR1..3:0.137759645757;NFE2L2:0.117288969708;SOX2:0.10270291127;NFIX:0.0802531701907;NANOG:0.0609756125862;XBP1:0.0599185888989;BACH2:0.0359036285295;FOS_FOS{B,L1}_JUN{B,D}:0.0292315156519;OCT4_SOX2{dimer}:0.029046788739;SOX5:0.0240218548129;FOXL1:0.0142700113411;ZNF384:0.0134618512308;MEF2{A,B,C,D}:0.0127200201248;HNF1A:-0.0599702175604;MYB:-0.0663445889295;ALX4:-0.0708551254911;NRF1:-0.094079207839;NANOG{mouse}:-0.110271271211;PAX3,7:-0.113528381781;PRRX1,2:-0.127502976244;RUNX1..3:-0.163819541151;POU3F1..4:-0.166324284932;NKX6-1,2:-0.179570767657;FOSL2:-0.183047735539;FOXM1:-0.18881078083;ATF6:-0.212849046815;LMO2:-0.229372577761;MYBL2:-0.231169534256;CDC5L:-0.23656296474;NFE2:-0.245024604683;JUN:-0.245270033623;PAX8:-0.263652003142;EP300:-0.264476780918;HOX{A6,A7,B6,B7}:-0.290898024273;NFKB1_REL_RELA:-0.302509886125;RFX1:-0.305201839484;ELK1,4_GABP{A,B1}:-0.314421305981;PRDM1:-0.342795361373;SNAI1..3:-0.3469310073;STAT2,4,6:-0.354232470249;HOXA9_MEIS1:-0.358605703217;VSX1,2:-0.360283042729;NKX3-1:-0.3656425779;HAND1,2:-0.376226973158;ARID5B:-0.385886734772;CRX:-0.402060202169;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.412849976701;POU1F1:-0.41458449957;CUX2:-0.444543566985;GATA4:-0.458949402361;ETS1,2:-0.460176855686;HIF1A:-0.46326592571;MYOD1:-0.463806734454;DMAP1_NCOR{1,2}_SMARC:-0.463832061626;HOX{A4,D4}:-0.467839171719;GATA6:-0.475190133064;HSF1,2:-0.477179835956;NFATC1..3:-0.490168496541;DBP:-0.500747516651;T:-0.502369966002;MYFfamily:-0.521794691698;HLF:-0.541903727318;AHR_ARNT_ARNT2:-0.543801210519;SPIB:-0.563312846397;PAX2:-0.575018673686;RORA:-0.611536917453;FOXD3:-0.619464989063;STAT1,3:-0.632814573466;NKX3-2:-0.632838926458;ADNP_IRX_SIX_ZHX:-0.695557692637;SPI1:-0.702925316971;CEBPA,B_DDIT3:-0.753403475851;TGIF1:-0.769172129782;FOXP1:-0.770059100961;PAX6:-0.793731015077;POU6F1:-0.817779459289;FOXQ1:-0.832829535752;NFIL3:-0.833320804341;EVI1:-0.841688427073;PDX1:-0.888479273;PITX1..3:-0.889252442739;FOX{D1,D2}:-0.893149172005;IRF1,2:-0.909150012116;AIRE:-0.916729322539;ELF1,2,4:-0.947762655614;ZEB1:-0.948879115382;NKX2-1,4:-0.952913460216;RBPJ:-0.959969880788;MAFB:-0.961906197757;STAT5{A,B}:-1.0014350925;RFX2..5_RFXANK_RFXAP:-1.02006411438;TEF:-1.02457665267;IKZF2:-1.03131159381;CREB1:-1.03552208915;FOXP3:-1.05246328723;FOX{F1,F2,J1}:-1.05958219604;ATF4:-1.0625273881;HMGA1,2:-1.06640811535;ATF5_CREB3:-1.09398240404;PAX4:-1.10005707389;FOXO1,3,4:-1.1239848159;IRF7:-1.12603081269;FOXA2:-1.18304072957;FOX{I1,J2}:-1.23324912694;ATF2:-1.24991695542;BPTF:-1.29156939044;TLX2:-1.36356733774;HBP1_HMGB_SSRP1_UBTF:-1.40466323994;ALX1:-1.40725499644;CDX1,2,4:-1.44437994002;SREBF1,2:-1.45140234372;FOXN1:-1.6403364944;ZBTB16:-2.09043258883
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11580-120F5;search_select_hide=table117:FF:11580-120F5
}}
}}

Latest revision as of 18:10, 4 June 2020

Name:Astrocyte - cerebellum, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12081
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuecerebellum
dev stageNA
sexNA
ageNA
cell typeastrocyte
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberSC1815
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004917
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12081 CAGE DRX008113 DRR008985
Accession ID Hg19

Library idBAMCTSS
CNhs12081 DRZ000410 DRZ001795
Accession ID Hg38

Library idBAMCTSS
CNhs12081 DRZ011760 DRZ013145
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0111
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0749
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0806
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.305
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0517
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.337
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.15
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.101
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.453
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0613
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0585
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.741
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.149
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0496
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.547
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.385
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.65
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.347
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.453
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.305
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12081

Jaspar motifP-value
MA0002.20.287
MA0003.10.347
MA0004.10.657
MA0006.10.191
MA0007.10.236
MA0009.10.105
MA0014.10.608
MA0017.10.996
MA0018.20.139
MA0019.10.1
MA0024.10.0327
MA0025.10.959
MA0027.10.504
MA0028.10.126
MA0029.10.397
MA0030.10.265
MA0031.10.0688
MA0035.20.727
MA0038.10.00273
MA0039.20.545
MA0040.10.52
MA0041.10.182
MA0042.10.62
MA0043.10.0125
MA0046.10.0575
MA0047.20.156
MA0048.10.0863
MA0050.11.40205e-6
MA0051.15.9504e-4
MA0052.10.479
MA0055.10.0146
MA0057.10.851
MA0058.10.617
MA0059.10.55
MA0060.12.11617e-7
MA0061.10.0628
MA0062.24.84277e-4
MA0065.20.211
MA0066.10.97
MA0067.10.0121
MA0068.10.147
MA0069.10.758
MA0070.10.00107
MA0071.10.904
MA0072.10.985
MA0073.10.941
MA0074.10.618
MA0076.10.0736
MA0077.10.14
MA0078.10.933
MA0079.20.395
MA0080.21.3903e-8
MA0081.10.00401
MA0083.10.0151
MA0084.10.904
MA0087.10.886
MA0088.10.313
MA0090.10.00902
MA0091.10.868
MA0092.10.429
MA0093.10.679
MA0099.20.541
MA0100.10.722
MA0101.10.072
MA0102.23.16246e-5
MA0103.10.107
MA0104.20.145
MA0105.10.0405
MA0106.10.932
MA0107.10.0762
MA0108.21.03865e-5
MA0111.10.0771
MA0112.20.747
MA0113.10.365
MA0114.10.495
MA0115.10.974
MA0116.10.0654
MA0117.10.084
MA0119.10.495
MA0122.10.672
MA0124.10.616
MA0125.10.74
MA0131.10.772
MA0135.10.0147
MA0136.15.20072e-10
MA0137.20.0918
MA0138.20.574
MA0139.10.842
MA0140.10.571
MA0141.10.558
MA0142.10.707
MA0143.10.951
MA0144.10.227
MA0145.10.935
MA0146.10.114
MA0147.10.15
MA0148.10.165
MA0149.10.143
MA0150.10.0107
MA0152.10.966
MA0153.10.312
MA0154.10.711
MA0155.10.0861
MA0156.11.08181e-5
MA0157.10.194
MA0159.10.0585
MA0160.10.813
MA0162.10.116
MA0163.10.183
MA0164.10.699
MA0258.10.534
MA0259.10.317



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12081

Novel motifP-value
10.034
100.0172
1000.808
1010.141
1020.411
1030.492
1040.494
1050.314
1060.871
1070.0729
1080.778
1090.864
110.942
1100.614
1110.0679
1120.0735
1130.419
1140.0571
1150.261
1160.382
1170.313
1180.608
1190.112
120.896
1200.338
1210.944
1220.77
1232.19386e-4
1240.739
1250.15
1260.566
1270.566
1280.872
1290.826
130.583
1300.0856
1310.268
1320.327
1330.998
1340.685
1350.74
1360.179
1370.0235
1380.178
1390.0447
140.775
1400.416
1410.364
1420.589
1430.679
1441
1450.742
1460.317
1470.635
1480.0364
1490.645
150.111
1500.178
1510.58
1520.217
1530.0253
1540.23
1550.205
1560.865
1570.642
1580.129
1590.777
160.814
1600.176
1610.907
1620.403
1630.632
1640.213
1650.0821
1660.977
1670.104
1680.56
1690.39
170.743
180.51
190.424
20.383
200.63
210.679
220.409
230.806
240.684
250.369
260.55
270.626
280.175
290.512
30.265
300.0463
310.829
321.50872e-4
330.965
340.299
350.147
360.0456
370.509
380.868
390.652
40.671
400.279
410.224
420.269
430.212
440.982
450.447
460.625
470.634
480.893
490.111
50.143
500.385
510.944
520.926
530.211
540.978
550.698
560.805
570.429
580.0587
590.121
60.417
600.452
610.234
620.0683
630.756
640.681
650.433
660.33
670.781
680.032
690.198
70.51
700.128
710.211
720.13
730.299
740.43
750.0234
760.0337
770.335
780.187
790.251
80.904
800.727
810.255
820.212
830.654
840.275
850.471
860.332
870.533
880.569
890.744
90.378
906.19139e-4
910.857
920.12
930.0727
940.383
950.962
960.164
970.828
980.697
990.0131



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12081


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000128 (oligodendrocyte)
0000126 (macroglial cell)
0000125 (glial cell)
0000255 (eukaryotic cell)
0000127 (astrocyte)
0002603 (astrocyte of the cerebellum)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0002037 (cerebellum)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002680 (regional part of metencephalon)
0002616 (regional part of brain)
0004733 (segmental subdivision of hindbrain)
0004732 (segmental subdivision of nervous system)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001895 (metencephalon)
0002028 (hindbrain)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000195 (human astrocyte of the cerebellum sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)

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