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{{f5samples
{{f5samples
|id=FF:11749-123G3
|DRA_sample_Accession=CAGE@SAMD00005254
|name=mesenchymal precursor cell - adipose, donor3
|accession_numbers=CAGE;DRX008547;DRR009419;DRZ000844;DRZ002229;DRZ012194;DRZ013579
|sample_id=11749
|ancestors_in_anatomy_facet=UBERON:0001013,UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_tube_id=123G3
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002570
|rna_box=123
|rna_position=G3
|sample_cell_lot=HSLIM-85
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=adipose tissue
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.1
|rna_od260/280=2.05
|sample_cell_type=mesenchymal precursor cell
|sample_cell_line=
|sample_collaboration=Claudio Schneider LNCIB
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=55.7025
|rna_concentration=0.7427
|sample_note=
|profile_hcage=CNhs12365,LSID914,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002570
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001013,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000270
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:19558373..19558392,-!p1@OSR1!1.69!126.50!OSR1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.68!47.16!HOXC5;;chr1:170632285..170632309,+!p1@PRRX1!1.53!37.17!PRRX1;;chr17:1959369..1959388,+!p2@HIC1!1.48!74.90!HIC1;;chr1:170633262..170633285,+!p3@PRRX1!1.44!30.51!PRRX1;;chr8:25902876..25902936,-!p1@EBF2!1.41!24.97!EBF2;;chr1:170633348..170633399,+!p2@PRRX1!1.37!30.51!PRRX1;;chr3:12330560..12330579,+!p1@PPARG!1.35!24.41!PPARG;;chr15:67430351..67430366,+!p10@SMAD3!1.35!21.64!SMAD3;;chr2:239756739..239756755,+!p2@TWIST2!1.23!27.19!TWIST2;;chr4:174451370..174451387,-!p1@HAND2!1.19!14.42!HAND2;;chr12:54402745..54402788,+!p1@HOXC8!1.17!13.87!HOXC8;;chr19:45971246..45971265,+!p1@FOSB!1.15!243.00!FOSB;;chr15:57511609..57511651,+!p2@TCF12!1.15!22.19!TCF12;;chr10:131762504..131762555,-!p1@EBF3!1.12!12.21!EBF3;;chr2:239756671..239756732,+!p1@TWIST2!1.11!38.28!TWIST2;;chr2:102091144..102091183,-!p2@RFX8!1.08!11.10!RFX8;;chr12:54380036..54380091,+!p4@HOXC10!1.08!11.10!HOXC10;;chr12:66218598..66218645,+!p2@HMGA2!1.05!48.27!HMGA2;;chr20:50179368..50179392,-!p2@NFATC2!1.05!13.32!NFATC2;;chr11:46299199..46299233,+!p1@CREB3L1!1.04!51.60!CREB3L1;;chr5:158526917..158526932,-!p1@EBF1!1.04!24.97!EBF1;;chr3:21792585..21792625,-!p2@ZNF385D!1.04!11.10!ZNF385D;;chr17:46675420..46675465,-!p3@HOXB6!1.03!11.10!HOXB6;;chr7:19157248..19157268,-!p1@TWIST1!1.02!26.63!TWIST1;;chr20:51588873..51588953,+!p1@TSHZ2!1.02!12.76!TSHZ2;;chr1:170632723..170632739,+!p8@PRRX1!1.02!9.43!PRRX1;;chr15:96874927..96874938,+!p8@NR2F2!1.00!19.42!NR2F2;;chr11:46299539..46299620,+!p2@CREB3L1!1.00!15.53!CREB3L1;;chr1:170632959..170632987,+!p4@PRRX1!1.00!9.99!PRRX1;;chr12:54393880..54393962,+!p1@HOXC9!0.99!8.88!HOXC9;;chr8:22550982..22550999,-!p1@EGR3!0.97!24.41!EGR3;;chr17:1958388..1958404,+!p1@HIC1!0.96!53.82!HIC1;;chr11:65687362..65687436,+!p3@DRAP1!0.96!37.73!DRAP1;;chr10:119303078..119303169,+!p2@EMX2!0.94!7.77!EMX2;;chr2:176994408..176994492,+!p1@HOXD8!0.94!7.77!HOXD8;;chr4:174450089..174450153,-!p2@HAND2!0.94!7.77!HAND2;;chr5:2751762..2751784,-!p1@IRX2!0.94!7.77!IRX2;;chr1:158979872..158979898,+!p3@IFI16!0.93!23.86!IFI16;;chr3:141121847..141121868,+!p5@ZBTB38!0.91!11.10!ZBTB38;;chr7:19157043..19157088,-!p2@TWIST1!0.88!17.20!TWIST1;;chr1:170632250..170632277,+!p7@PRRX1!0.88!6.66!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.88!6.66!PRRX1;;chr12:54380404..54380433,+!p3@HOXC10!0.88!6.66!HOXC10;;chr1:158979792..158979814,+!p2@IFI16!0.87!64.36!IFI16;;chr15:96874145..96874166,+!p7@NR2F2!0.87!12.76!NR2F2;;chr8:49833948..49833973,-!p2@SNAI2!0.85!41.06!SNAI2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.85!6.10!HOXC5;;chr1:170632477..170632506,+!p6@PRRX1!0.85!6.10!PRRX1;;chr10:64576105..64576133,-!p1@EGR2!0.84!12.76!EGR2;;chr11:65686802..65686818,+!p6@DRAP1!0.84!10.54!DRAP1;;chr19:50432453..50432468,+!p1@ATF5!0.83!349.53!ATF5;;chr10:31610110..31610159,+!p2@ZEB1!0.82!5.55!ZEB1;;chr12:54394309..54394336,+!p2@HOXC9!0.82!5.55!HOXC9;;chr17:46682321..46682362,-!p1@HOXB6!0.82!5.55!HOXB6;;chr17:46690839..46690884,-!p1@HOXB8!0.82!5.55!HOXB8;;chr7:27205136..27205164,-!p1@HOXA9!0.82!5.55!HOXA9;;chr2:119604456..119604501,-!p2@EN1!0.82!5.55!EN1;;chr3:21792682..21792720,-!p1@ZNF385D!0.82!5.55!ZNF385D;;chr12:53614115..53614154,-!p1@RARG!0.81!31.07!RARG;;chr15:42749722..42749739,-!p2@ZFP106!0.80!9.99!ZFP106;;chr1:158985493..158985535,+!p4@IFI16!0.80!8.32!IFI16;;chr14:75745523..75745537,+!p1@FOS!0.79!675.75!FOS;;chr21:36260773..36260804,-!p7@RUNX1!0.79!7.21!RUNX1;;chr11:65686732..65686756,+!p2@DRAP1!0.78!23.30!DRAP1;;chr1:170633245..170633256,+!p14@PRRX1!0.78!4.99!PRRX1;;chr2:102091590..102091601,-!p5@RFX8!0.78!4.99!RFX8;;chr3:141087454..141087465,+!p19@ZBTB38!0.78!4.99!ZBTB38;;chr3:141121820..141121838,+!p9@ZBTB38!0.78!4.99!ZBTB38;;chr15:96873984..96873999,+!p3@NR2F2!0.77!39.39!NR2F2;;chr7:14029283..14029311,-!p1@ETV1!0.77!28.30!ETV1;;chr9:132427972..132428056,+!p1@PRRX2!0.77!6.66!PRRX2;;chr9:16870659..16870675,-!p2@BNC2!0.77!6.10!BNC2;;chr9:110252035..110252057,-!p1@KLF4!0.76!84.33!KLF4;;chr19:31840130..31840160,-!p2@TSHZ3!0.76!7.77!TSHZ3;;chr2:74730430..74730451,-!p1@LBX2!0.74!7.77!LBX2;;chr2:102091566..102091581,-!p1@RFX8!0.74!4.44!RFX8;;chr1:170632439..170632465,+!p11@PRRX1!0.74!4.44!PRRX1;;chr20:51589133..51589159,+!p2@TSHZ2!0.74!4.44!TSHZ2;;chr8:49833978..49833996,-!p1@SNAI2!0.73!100.42!SNAI2;;chr12:66218836..66218888,+!p1@HMGA2!0.73!45.49!HMGA2;;chr8:72756267..72756296,-!p4@MSC!0.73!6.66!MSC;;chr7:113726357..113726443,+!p1@FOXP2!0.72!7.77!FOXP2;;chr21:36260295..36260310,-!p3@RUNX1!0.72!7.21!RUNX1;;chr14:62162258..62162269,+!p2@HIF1A!0.71!44.38!HIF1A;;chr14:24837368..24837401,+!p1@NFATC4!0.69!9.99!NFATC4;;chr1:158979851..158979865,+!p5@IFI16!0.69!9.43!IFI16;;chr1:170633225..170633230,+!p25@PRRX1!0.69!3.88!PRRX1;;chr19:31840168..31840186,-!p6@TSHZ3!0.69!3.88!TSHZ3;;chr2:177001290..177001315,+!p1@HOXD3!0.69!3.88!HOXD3;;chr3:141121871..141121885,+!p13@ZBTB38!0.69!3.88!ZBTB38;;chr8:93074803..93074845,-!p1@RUNX1T1!0.69!3.88!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.69!3.88!RUNX1T1;;chr9:16705069..16705086,-!p3@BNC2!0.69!3.88!BNC2;;chr11:65687222..65687240,+!p7@DRAP1!0.68!4.99!DRAP1;;chr3:114343768..114343822,-!p1@ZBTB20!0.67!18.31!ZBTB20;;chr9:14314106..14314119,-!p5@NFIB!0.67!7.21!NFIB;;chr6:144329384..144329405,-!p1@PLAGL1!0.66!48.27!PLAGL1;;chr17:46622070..46622109,-!p1@HOXB2!0.66!8.88!HOXB2;;chr3:141105705..141105770,+!p4@ZBTB38!0.66!4.44!ZBTB38;;chr1:164528384..164528409,+!p3@PBX1!0.65!12.21!PBX1;;chr18:19749517..19749531,+!p3@GATA6!0.65!6.66!GATA6;;chr18:22932080..22932170,-!p1@ZNF521!0.64!16.64!ZNF521;;chr7:44143978..44143989,+!p2@AEBP1!0.64!6.66!AEBP1;;chr8:99956662..99956684,+!p1@OSR2!0.64!5.55!OSR2;;chr6:134210243..134210257,+!p1@TCF21!0.64!3.33!TCF21;;chr7:27183291..27183324,-!p1@HOXA5!0.64!3.33!HOXA5;;chr7:27205106..27205134,-!p2@HOXA9!0.64!3.33!HOXA9;;chr8:102216978..102217003,-!p4@ZNF706!0.64!3.33!ZNF706;;chr15:67430381..67430396,+!p21@SMAD3!0.64!3.33!SMAD3;;chr19:13135386..13135435,+!p4@NFIX!0.64!3.33!NFIX;;chr1:44513995..44514031,+!p1@KLF17!0.64!3.33!KLF17;;chr2:102091478..102091490,-!p3@RFX8!0.64!3.33!RFX8;;chr2:19558327..19558334,-!p2@OSR1!0.64!3.33!OSR1;;chr2:45236540..45236577,-!p1@SIX2!0.64!3.33!SIX2;;chr12:54422217..54422239,+!p3@HOXC6!0.64!3.33!HOXC6;;chr12:85673977..85674015,+!p1@ALX1!0.64!3.33!ALX1;;chr9:16870710..16870763,-!p1@BNC2!0.63!6.10!BNC2;;chr17:46688334..46688385,-!p1@HOXB7!0.63!4.99!HOXB7;;chr7:44143925..44143970,+!p1@AEBP1!0.62!84.33!AEBP1;;chr1:158969752..158969780,+!p6@IFI16!0.62!6.10!IFI16;;chr19:13134772..13134822,+!p2@NFIX!0.62!4.99!NFIX;;chr8:128748308..128748324,+!p2@MYC!0.61!102.08!MYC;;chr12:66218255..66218304,+!p3@HMGA2!0.61!9.43!HMGA2;;chr15:37392576..37392589,-!p12@MEIS2!0.61!3.88!MEIS2;;chr15:37392724..37392757,-!p1@MEIS2!0.60!16.09!MEIS2;;chr5:133450365..133450444,+!p1@TCF7!0.60!16.09!TCF7;;chr10:114710244..114710257,+!p3@TCF7L2!0.60!9.43!TCF7L2;;chr1:23696308..23696339,-!p2@ZNF436!0.60!7.21!ZNF436;;chr19:50435736..50435781,+!p3@ATF5!0.60!4.44!ATF5;;chr2:66662281..66662308,+!p1@MEIS1!0.59!11.65!MEIS1;;chr7:137686763..137686784,-!p5@CREB3L2!0.59!5.55!CREB3L2;;chr15:37391588..37391604,-!p11@MEIS2!0.59!3.88!MEIS2;;chr1:59249732..59249749,-!p2@JUN!0.58!41.61!JUN;;chr21:36260343..36260402,-!p6@RUNX1!0.58!4.99!RUNX1;;chr19:3366625..3366629,+!p4@NFIC!0.58!4.44!NFIC;;chr14:95236440..95236465,-!p1@GSC!0.58!2.77!GSC;;chr16:31076332..31076388,-!p3@ZNF668!0.58!2.77!ZNF668;;chr17:46621146..46621180,-!p10@HOXB2!0.58!2.77!HOXB2;;chr17:46621279..46621297,-!p13@HOXB2!0.58!2.77!HOXB2;;chr19:13135582..13135600,+!p3@NFIX!0.58!2.77!NFIX;;chr2:119605214..119605230,-!p1@EN1!0.58!2.77!EN1;;chr2:8819364..8819390,+!p2@ID2!0.58!2.77!ID2;;chr11:46299443..46299459,+!p4@CREB3L1!0.58!2.77!CREB3L1;;chr12:54378923..54378966,+!p1@HOXC10!0.58!2.77!HOXC10;;chr12:54380112..54380126,+!p5@HOXC10!0.58!2.77!HOXC10;;chr1:170632115..170632136,+!p9@PRRX1!0.58!2.77!PRRX1;;chr7:27183263..27183284,-!p2@HOXA5!0.58!2.77!HOXA5;;chr7:27192185..27192209,-!p1@HOXA3!0.58!2.77!HOXA3;;chr7:27196217..27196246,-!p2@HOXA7!0.58!2.77!HOXA7;;chr8:22550530..22550609,-!p2@EGR3!0.58!2.77!EGR3;;chr1:8938709..8938720,-!p3@ENO1!0.57!165.33!ENO1;;chr11:65687158..65687216,+!p4@DRAP1!0.57!18.86!DRAP1;;chr18:19749541..19749557,+!p1@GATA6!0.57!9.99!GATA6;;chr3:107244229..107244254,+!p3@BBX!0.57!4.99!BBX;;chr17:46621101..46621143,-!p7@HOXB2!0.57!3.88!HOXB2;;chr15:96874012..96874042,+!p2@NR2F2!0.56!29.40!NR2F2;;chr14:62162285..62162296,+!p3@HIF1A!0.56!16.64!HIF1A;;chr15:96869114..96869160,+!p11@NR2F2!0.56!3.88!NR2F2;;chr6:32095523..32095564,-!p2@ATF6B!0.56!3.88!ATF6B;;chr6:85473156..85473210,-!p2@TBX18!0.56!3.33!TBX18;;chr11:120107344..120107351,+!p1@POU2F3!0.56!3.33!POU2F3;;chr9:14314566..14314618,-!p1@NFIB!0.55!38.84!NFIB;;chr17:59477233..59477263,+!p1@TBX2!0.55!9.43!TBX2;;chr12:10875351..10875422,-!p4@CSDA!0.55!5.55!CSDA;;chr7:27135591..27135658,-!p1@HOXA1!0.55!5.55!HOXA1;;chr15:37390374..37390422,-!p9@MEIS2!0.55!3.33!MEIS2;;chr7:28725740..28725778,+!p1@CREB5!0.54!27.74!CREB5;;chr12:115121962..115121987,-!p1@TBX3!0.54!26.08!TBX3;;chr14:45722287..45722308,-!p2@MIS18BP1!0.54!7.77!MIS18BP1;;chr12:80085255..80085284,-!p9@PAWR!0.54!3.88!PAWR;;chr15:96876966..96877017,+!p12@NR2F2!0.54!3.88!NR2F2;;chr18:19749386..19749404,+!p2@GATA6!0.54!3.88!GATA6;;chr10:63809106..63809127,+!p1@ARID5B!0.53!41.06!ARID5B;;chr17:46621937..46621966,-!p2@HOXB2!0.53!7.77!HOXB2;;chr1:151032782..151032801,+!p4@MLLT11!0.53!5.55!MLLT11;;chr15:96869255..96869291,+!p6@NR2F2!0.53!4.99!NR2F2;;chr18:3448455..3448480,+!p5@TGIF1!0.53!4.99!TGIF1;;chr12:66218573..66218596,+!p7@HMGA2!0.53!3.88!HMGA2;;chr14:75746722..75746777,+!p2@FOS!0.53!3.33!FOS;;chr15:96873861..96873872,+!p9@NR2F2!0.52!5.55!NR2F2;;chr17:46655704..46655718,-!p2@HOXB4!0.52!3.88!HOXB4;;chr6:42419316..42419340,-!p4@TRERF1!0.52!3.88!TRERF1;;chr7:42276787..42276815,-!p1@GLI3!0.51!7.21!GLI3;;chr3:12329397..12329433,+!p2@PPARG!0.51!6.10!PPARG;;chr16:79633894..79633954,-!p3@MAF!0.51!4.99!MAF;;chr18:52989081..52989117,-!p7@T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C2!0.19!0.55!FOXC2;;chr16:86601088..86601105,+!p5@FOXC2!0.19!0.55!FOXC2;;chr16:86612046..86612065,+!p3@FOXL1!0.19!0.55!FOXL1;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!0.19!0.55!SEBOX;;chr17:3571934..3571935,-!p3@TAX1BP3!0.19!0.55!TAX1BP3;;chr17:38244601..38244612,+!p6@THRA!0.19!0.55!THRA;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!0.19!0.55!SMARCE1;;chr17:40719286..40719299,+!p6@MLX!0.19!0.55!MLX;;chr17:42287802..42287806,-!p25@UBTF!0.19!0.55!UBTF;;chr17:46655578..46655589,-!p4@HOXB4!0.19!0.55!HOXB4;;chr17:46655672..46655697,-!p3@HOXB4!0.19!0.55!HOXB4;;chr17:46667561..46667572,-!p4@HOXB3!0.19!0.55!HOXB3;;chr17:46671504..46671541,-!p2@HOXB5!0.19!0.55!HOXB5;;chr17:46675539..46675551,-!p7@HOXB6!0.19!0.55!HOXB6;;chr17:46688310..46688323,-!p4@HOXB7!0.19!0.55!HOXB7;;chr17:46692624..46692659,-!p3@HOXB8!0.19!0.55!HOXB8;;chr17:48072574..48072597,-!p1@DLX3!0.19!0.55!DLX3;;chr17:59477266..59477273,+!p6@TBX2!0.19!0.55!TBX2;;chr17:79881318..79881331,-!p7@MAFG!0.19!0.55!MAFG;;chr18:19749353..19749367,+!p4@GATA6!0.19!0.55!GATA6;;chr18:19749504..19749515,+!p5@GATA6!0.19!0.55!GATA6;;chr18:42260861..42260882,+!p5@SETBP1!0.19!0.55!SETBP1;;chr18:46477549..46477578,-!p7@SMAD7!0.19!0.55!SMAD7;;chr18:53070846..53070902,-!p6@TCF4!0.19!0.55!TCF4;;chr18:77155942..77155951,+!p3@NFATC1!0.19!0.55!NFATC1;;chr19:12267577..12267593,-!p3@ZNF625!0.19!0.55!ZNF625;;chr19:12444399..12444415,-!p5@ZNF563!0.19!0.55!ZNF563;;chr19:12595565..12595576,-!p3@ZNF709!0.19!0.55!ZNF709;;chr19:13135566..13135577,+!p9@NFIX!0.19!0.55!NFIX;;chr19:16435705..16435726,+!p3@KLF2!0.19!0.55!KLF2;;chr19:20278043..20278054,+!p2@ZNF486!0.19!0.55!ZNF486;;chr19:22034784..22034801,-!p4@ZNF43!0.19!0.55!ZNF43;;chr19:22193731..22193751,-!p1@ZNF208!0.19!0.55!ZNF208;;chr19:31840278..31840300,-!p5@TSHZ3!0.19!0.55!TSHZ3;;chr19:3366429..3366439,+!p16@NFIC!0.19!0.55!NFIC;;chr19:3572758..3572795,+!p7@HMG20B!0.19!0.55!HMG20B;;chr19:3576938..3576962,+!p9@HMG20B!0.19!0.55!HMG20B;;chr5:121465268..121465281,+!p2@ZNF474!0.19!0.55!ZNF474;;chr5:133450506..133450513,+!p6@TCF7!0.19!0.55!TCF7;;chr5:133477905..133477956,+!p5@TCF7!0.19!0.55!TCF7;;chr5:134369222..134369237,-!p8@PITX1!0.19!0.55!PITX1;;chr5:134369683..134369708,-!p7@PITX1!0.19!0.55!PITX1;;chr5:134369879..134369898,-!p2@PITX1!0.19!0.55!PITX1;;chr5:142779999..142780026,-!p20@NR3C1!0.19!0.55!NR3C1;;chr5:142780168..142780186,-!p23@NR3C1!0.19!0.55!NR3C1;;chr5:158523357..158523390,-!p9@EBF1!0.19!0.55!EBF1;;chr5:158524563..158524578,-!p11@EBF1!0.19!0.55!EBF1;;chr5:158524951..158524969,-!p15@EBF1!0.19!0.55!EBF1;;chr5:158526693..158526706,-!p8@EBF1!0.19!0.55!EBF1;;chr5:158526862..158526869,-!p14@EBF1!0.19!0.55!EBF1;;chr5:158527139..158527161,-!p5@EBF1!0.19!0.55!EBF1;;chr5:158527253..158527264,-!p10@EBF1!0.19!0.55!EBF1;;chr5:3595934..3595957,+!p2@IRX1!0.19!0.55!IRX1;;chr5:92919452..92919496,+!p11@NR2F1!0.19!0.55!NR2F1;;chr6:106546731..106546755,+!p5@PRDM1!0.19!0.55!PRDM1;;chr6:106546786..106546802,+!p6@PRDM1!0.19!0.55!PRDM1;;chr6:126111875..126111886,+!p10@NCOA7!0.19!0.55!NCOA7;;chr6:1312753..1312800,+!p4@FOXQ1!0.19!0.55!FOXQ1;;chr6:134273300..134273320,+!p7@TBPL1!0.19!0.55!TBPL1;;chr6:1389989..1390019,+!p2@FOXF2!0.19!0.55!FOXF2;;chr6:155635647..155635658,-!p2@TFB1M!0.19!0.55!TFB1M;;chr6:1612219..1612239,+!p8@FOXC1!0.19!0.55!FOXC1;;
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002570
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=
|created_by=
|creation_date=
|def=
|has_quality=
|has_quality=
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|rna_box=123
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|rna_concentration=0.7427
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=2.1
|rna_od260/280=2.05
|rna_position=G3
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|sample_cell_lot=HSLIM-85
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
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|sample_disease=
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binding;8.25587402869489e-69!GO:0005739;mitochondrion;8.20679061461873e-68!GO:0044428;nuclear part;2.86351540723214e-62!GO:0003723;RNA binding;4.22429809852867e-60!GO:0005634;nucleus;1.09114993133813e-55!GO:0031090;organelle membrane;4.845583317618e-53!GO:0005840;ribosome;2.15482524512433e-51!GO:0019538;protein metabolic process;4.40971882492008e-49!GO:0006412;translation;4.66086840113842e-49!GO:0006396;RNA processing;4.73147377756627e-46!GO:0003735;structural constituent of ribosome;1.00297682184657e-45!GO:0043234;protein complex;1.23065885207637e-45!GO:0009058;biosynthetic process;1.87178594384097e-45!GO:0044429;mitochondrial part;7.92925308447206e-45!GO:0044260;cellular macromolecule metabolic process;3.01479639824995e-44!GO:0044267;cellular protein metabolic process;2.45002494577505e-43!GO:0016043;cellular component organization and biogenesis;4.93743979812585e-42!GO:0015031;protein transport;5.90034085037761e-42!GO:0044249;cellular biosynthetic process;1.12933317010817e-41!GO:0033036;macromolecule localization;3.09742043420369e-41!GO:0005829;cytosol;1.34323437216401e-40!GO:0033279;ribosomal subunit;2.12947067866749e-40!GO:0009059;macromolecule biosynthetic process;2.68587274130113e-40!GO:0045184;establishment of protein localization;2.88048786329017e-39!GO:0031981;nuclear lumen;2.41405239787448e-38!GO:0008104;protein localization;3.74708003857415e-38!GO:0031967;organelle envelope;7.13957809342693e-38!GO:0031975;envelope;1.64431427062887e-37!GO:0043283;biopolymer metabolic process;7.41567388689594e-36!GO:0010467;gene expression;1.23206078517256e-34!GO:0016071;mRNA metabolic process;1.8563203255051e-34!GO:0008380;RNA splicing;1.76813776545643e-32!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.12401559134326e-32!GO:0046907;intracellular transport;3.09906310155951e-32!GO:0006397;mRNA processing;1.97992694361574e-30!GO:0043228;non-membrane-bound organelle;2.70480420475199e-29!GO:0043232;intracellular non-membrane-bound organelle;2.70480420475199e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.4767338447467e-28!GO:0005740;mitochondrial envelope;1.81434822785114e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.63496587882914e-28!GO:0065003;macromolecular complex assembly;7.32416369092526e-27!GO:0006996;organelle organization and biogenesis;1.12585236015253e-26!GO:0031966;mitochondrial membrane;1.14376883921154e-26!GO:0006886;intracellular protein transport;1.23089664469836e-26!GO:0019866;organelle inner membrane;7.04271615492374e-26!GO:0022607;cellular component assembly;2.3265454166836e-24!GO:0005743;mitochondrial inner membrane;2.81549454082273e-24!GO:0005783;endoplasmic reticulum;2.29190018132656e-23!GO:0044445;cytosolic part;2.9184716328351e-23!GO:0006119;oxidative phosphorylation;3.13462651550681e-23!GO:0012505;endomembrane system;9.81125685624936e-23!GO:0005681;spliceosome;2.90059664261087e-22!GO:0005654;nucleoplasm;4.72853033892448e-22!GO:0006259;DNA metabolic process;6.42168328993563e-22!GO:0015934;large ribosomal subunit;6.96911819482241e-22!GO:0006457;protein folding;9.65269321966665e-21!GO:0016462;pyrophosphatase activity;3.83117123824886e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.93024092747512e-20!GO:0051649;establishment of cellular localization;4.64561758747859e-20!GO:0044455;mitochondrial membrane part;5.2599824369642e-20!GO:0051641;cellular localization;5.35256352476812e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;5.54215049423363e-20!GO:0044432;endoplasmic reticulum part;6.50485263245571e-20!GO:0031980;mitochondrial lumen;1.19328160158066e-19!GO:0005759;mitochondrial matrix;1.19328160158066e-19!GO:0015935;small ribosomal subunit;1.79572493121978e-19!GO:0017111;nucleoside-triphosphatase activity;2.07139781175711e-19!GO:0048770;pigment granule;2.47316830995915e-18!GO:0042470;melanosome;2.47316830995915e-18!GO:0007049;cell cycle;1.20893055023389e-17!GO:0000166;nucleotide binding;1.2788937829128e-17!GO:0005730;nucleolus;1.63988024540028e-17!GO:0044451;nucleoplasm part;1.92887122741262e-17!GO:0005746;mitochondrial respiratory chain;3.55662482351533e-17!GO:0051186;cofactor metabolic process;3.61421802748406e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.55551224959948e-17!GO:0022618;protein-RNA complex assembly;9.45055456630354e-17!GO:0003676;nucleic acid binding;2.09661925705792e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.46639149097545e-16!GO:0005794;Golgi apparatus;3.52029690492655e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.5376071108528e-15!GO:0003954;NADH dehydrogenase activity;1.5376071108528e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.5376071108528e-15!GO:0005761;mitochondrial ribosome;1.88763437913171e-15!GO:0000313;organellar ribosome;1.88763437913171e-15!GO:0016874;ligase activity;3.15100625042726e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.31576810716991e-15!GO:0044265;cellular macromolecule catabolic process;8.35897166039987e-15!GO:0048193;Golgi vesicle transport;1.13383598095616e-14!GO:0043285;biopolymer catabolic process;1.1736687948402e-14!GO:0008135;translation factor activity, nucleic acid binding;1.52848006070805e-14!GO:0008134;transcription factor binding;1.79673492882108e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.47346244149101e-14!GO:0006605;protein targeting;3.75745986145087e-14!GO:0051082;unfolded protein binding;4.52635889748029e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;5.62820833132564e-14!GO:0044248;cellular catabolic process;7.30254552886359e-14!GO:0009057;macromolecule catabolic process;9.18207309246527e-14!GO:0030964;NADH dehydrogenase complex (quinone);9.53394673843278e-14!GO:0045271;respiratory chain complex I;9.53394673843278e-14!GO:0005747;mitochondrial respiratory chain complex I;9.53394673843278e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.07249831070614e-13!GO:0005793;ER-Golgi intermediate compartment;1.08699908173666e-13!GO:0006512;ubiquitin cycle;1.09566790306854e-13!GO:0019941;modification-dependent protein catabolic process;1.09566790306854e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.09566790306854e-13!GO:0044257;cellular protein catabolic process;1.10126062056566e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.10126062056566e-13!GO:0042773;ATP synthesis coupled electron transport;1.10126062056566e-13!GO:0005789;endoplasmic reticulum membrane;1.38307338069157e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.63733490277375e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.75271976236784e-13!GO:0006732;coenzyme metabolic process;1.84029146875653e-13!GO:0022402;cell cycle process;1.94666753369522e-13!GO:0016070;RNA metabolic process;2.31137652392404e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.91366790743356e-13!GO:0006974;response to DNA damage stimulus;2.94181033037844e-13!GO:0030163;protein catabolic process;1.03451880734916e-12!GO:0042254;ribosome biogenesis and assembly;1.86617461692483e-12!GO:0017076;purine nucleotide binding;2.2265365651104e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;3.09010711433413e-12!GO:0000375;RNA splicing, via transesterification reactions;3.09010711433413e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.09010711433413e-12!GO:0032553;ribonucleotide binding;4.10723452416303e-12!GO:0032555;purine ribonucleotide binding;4.10723452416303e-12!GO:0000278;mitotic cell cycle;5.50076759230271e-12!GO:0016192;vesicle-mediated transport;1.26351649809798e-11!GO:0003743;translation initiation factor activity;2.61483384791286e-11!GO:0009259;ribonucleotide metabolic process;6.59467536108018e-11!GO:0006163;purine nucleotide metabolic process;8.58188776341144e-11!GO:0006413;translational initiation;9.15197889551724e-11!GO:0016887;ATPase activity;1.16205682921828e-10!GO:0009055;electron carrier activity;1.16205682921828e-10!GO:0006281;DNA repair;1.47134909333844e-10!GO:0006399;tRNA metabolic process;1.70209068002312e-10!GO:0009150;purine ribonucleotide metabolic process;2.18414331443944e-10!GO:0005635;nuclear envelope;3.03119385275398e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.13002975245879e-10!GO:0009719;response to endogenous stimulus;4.19304865397948e-10!GO:0005524;ATP binding;4.24377920562354e-10!GO:0006164;purine nucleotide biosynthetic process;4.78993128833631e-10!GO:0006446;regulation of translational initiation;5.22832841715368e-10!GO:0042623;ATPase activity, coupled;5.31913167672746e-10!GO:0005694;chromosome;5.82265414077051e-10!GO:0043412;biopolymer modification;6.0716552211392e-10!GO:0030554;adenyl nucleotide binding;6.15017216134657e-10!GO:0032559;adenyl ribonucleotide binding;8.37912824723705e-10!GO:0009260;ribonucleotide biosynthetic process;9.70815346597437e-10!GO:0031965;nuclear membrane;9.70972830159871e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.09446918187121e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.16943857637453e-09!GO:0003712;transcription cofactor activity;1.36659169168192e-09!GO:0016491;oxidoreductase activity;1.52825742931625e-09!GO:0016604;nuclear body;2.22822431406225e-09!GO:0000074;regulation of progression through cell cycle;2.4091353835517e-09!GO:0006913;nucleocytoplasmic transport;2.45094271894501e-09!GO:0044427;chromosomal part;2.55896634550787e-09!GO:0012501;programmed cell death;2.65778378910133e-09!GO:0051726;regulation of cell cycle;2.93330347694537e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.98836504972286e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.32305844395033e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.6501183304318e-09!GO:0009144;purine nucleoside triphosphate metabolic process;3.6501183304318e-09!GO:0009141;nucleoside triphosphate metabolic process;3.97659891855763e-09!GO:0006915;apoptosis;4.13594658645657e-09!GO:0005788;endoplasmic reticulum lumen;4.64977107905401e-09!GO:0051169;nuclear transport;4.74843712689326e-09!GO:0044453;nuclear membrane part;5.46407550123105e-09!GO:0048523;negative regulation of cellular process;7.79847784286977e-09!GO:0015986;ATP synthesis coupled proton transport;8.17665082500783e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.17665082500783e-09!GO:0009056;catabolic process;1.26055916737497e-08!GO:0006260;DNA replication;1.27314834523074e-08!GO:0006464;protein modification process;1.32656451170972e-08!GO:0008219;cell death;1.44256098069917e-08!GO:0016265;death;1.44256098069917e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.44256098069917e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.44256098069917e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.44256098069917e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.57401053336527e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.57401053336527e-08!GO:0000087;M phase of mitotic cell cycle;1.78911503066566e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.90576186387341e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.90576186387341e-08!GO:0008565;protein transporter activity;1.93238734263325e-08!GO:0051276;chromosome organization and biogenesis;1.99392907340191e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.05986859077869e-08!GO:0043038;amino acid activation;2.16356321031897e-08!GO:0006418;tRNA aminoacylation for protein translation;2.16356321031897e-08!GO:0043039;tRNA aminoacylation;2.16356321031897e-08!GO:0009060;aerobic respiration;2.16930335196098e-08!GO:0009117;nucleotide metabolic process;2.7478392048138e-08!GO:0007067;mitosis;2.7478392048138e-08!GO:0046034;ATP metabolic process;2.99701393857487e-08!GO:0051188;cofactor biosynthetic process;3.51278339230021e-08!GO:0006364;rRNA processing;4.22935688092515e-08!GO:0019829;cation-transporting ATPase activity;4.45169960897278e-08!GO:0016787;hydrolase activity;5.724892420438e-08!GO:0016072;rRNA metabolic process;5.99721082375276e-08!GO:0045333;cellular respiration;6.11312459839491e-08!GO:0030120;vesicle coat;6.33934782364963e-08!GO:0030662;coated vesicle membrane;6.33934782364963e-08!GO:0004386;helicase activity;6.36767629186861e-08!GO:0017038;protein import;1.29650822061275e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.3054889949448e-07!GO:0006754;ATP biosynthetic process;1.353664361661e-07!GO:0006753;nucleoside phosphate metabolic process;1.353664361661e-07!GO:0008639;small protein conjugating enzyme activity;1.43281101497863e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.54820393924138e-07!GO:0044431;Golgi apparatus part;1.5983798967322e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.61643806314417e-07!GO:0008026;ATP-dependent helicase activity;1.62411459747349e-07!GO:0051187;cofactor catabolic process;1.66114530616351e-07!GO:0016607;nuclear speck;1.9105872272177e-07!GO:0005768;endosome;1.97609770809473e-07!GO:0022403;cell cycle phase;2.03700499123345e-07!GO:0006461;protein complex assembly;2.17581145826427e-07!GO:0004842;ubiquitin-protein ligase activity;2.39724522969213e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.7436338568606e-07!GO:0006099;tricarboxylic acid cycle;3.0183191443055e-07!GO:0046356;acetyl-CoA catabolic process;3.0183191443055e-07!GO:0065002;intracellular protein transport across a membrane;3.13956375448243e-07!GO:0003924;GTPase activity;3.13956375448243e-07!GO:0019787;small conjugating protein ligase activity;3.42628567349173e-07!GO:0006323;DNA packaging;3.58117682050223e-07!GO:0048519;negative regulation of biological process;3.85902927808291e-07!GO:0006366;transcription from RNA polymerase II promoter;3.92068002844829e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.17205544615007e-07!GO:0043566;structure-specific DNA binding;4.26202094642747e-07!GO:0005839;proteasome core complex (sensu Eukaryota);4.852404259399e-07!GO:0051246;regulation of protein metabolic process;5.07129343576645e-07!GO:0009109;coenzyme catabolic process;6.37674982933215e-07!GO:0048475;coated membrane;7.6405464929723e-07!GO:0030117;membrane coat;7.6405464929723e-07!GO:0007005;mitochondrion organization and biogenesis;8.64627096963713e-07!GO:0005643;nuclear pore;8.83024743787101e-07!GO:0016853;isomerase activity;8.86075660417741e-07!GO:0065004;protein-DNA complex assembly;9.12485788893503e-07!GO:0003697;single-stranded DNA binding;9.24298053440623e-07!GO:0009108;coenzyme biosynthetic process;9.65368687059538e-07!GO:0051301;cell division;9.84146646919749e-07!GO:0006084;acetyl-CoA metabolic process;1.02113532370209e-06!GO:0043687;post-translational protein modification;1.09064175497468e-06!GO:0006091;generation of precursor metabolites and energy;1.40073063190507e-06!GO:0016881;acid-amino acid ligase activity;2.17751087260876e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.36140824299265e-06!GO:0004298;threonine endopeptidase activity;2.43128252521019e-06!GO:0006333;chromatin assembly or disassembly;2.67579614475695e-06!GO:0045259;proton-transporting ATP synthase complex;2.8506792957702e-06!GO:0006752;group transfer coenzyme metabolic process;2.87446687846828e-06!GO:0005762;mitochondrial large ribosomal subunit;3.29097536612669e-06!GO:0000315;organellar large ribosomal subunit;3.29097536612669e-06!GO:0000139;Golgi membrane;3.44139839643308e-06!GO:0000785;chromatin;3.83284785022583e-06!GO:0044440;endosomal part;3.85558970360768e-06!GO:0010008;endosome membrane;3.85558970360768e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.97689322152665e-06!GO:0046930;pore complex;4.34227164300791e-06!GO:0005770;late endosome;4.34957347616946e-06!GO:0003714;transcription corepressor activity;4.60809784202936e-06!GO:0042981;regulation of apoptosis;4.95955806674586e-06!GO:0045786;negative regulation of progression through cell cycle;6.18635136545935e-06!GO:0005773;vacuole;6.31341246600321e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.35797734410342e-06!GO:0016779;nucleotidyltransferase activity;6.67413926109733e-06!GO:0043067;regulation of programmed cell death;6.7429247041726e-06!GO:0000279;M phase;6.94078005993439e-06!GO:0006403;RNA localization;7.27692661116964e-06!GO:0000245;spliceosome assembly;7.61863218025595e-06!GO:0045454;cell redox homeostasis;8.49414923816194e-06!GO:0015630;microtubule cytoskeleton;8.49414923816194e-06!GO:0050657;nucleic acid transport;9.49046393953961e-06!GO:0051236;establishment of RNA localization;9.49046393953961e-06!GO:0050658;RNA transport;9.49046393953961e-06!GO:0008654;phospholipid biosynthetic process;9.83869565269332e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.1151651652334e-05!GO:0005813;centrosome;1.30222598212975e-05!GO:0043069;negative regulation of programmed cell death;1.59575327632012e-05!GO:0006613;cotranslational protein targeting to membrane;1.70476182162775e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.82168555936976e-05!GO:0043066;negative regulation of apoptosis;1.90913314041917e-05!GO:0051170;nuclear import;2.16089855136551e-05!GO:0031324;negative regulation of cellular metabolic process;2.19890151014769e-05!GO:0016859;cis-trans isomerase activity;2.26642771705893e-05!GO:0031252;leading edge;2.4796073227928e-05!GO:0031988;membrane-bound vesicle;2.60684830971664e-05!GO:0005667;transcription factor complex;2.64325475983141e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.64589935551897e-05!GO:0006916;anti-apoptosis;2.85850938741472e-05!GO:0050794;regulation of cellular process;2.88061999829862e-05!GO:0016740;transferase activity;3.21854610099189e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.54377990919361e-05!GO:0005815;microtubule organizing center;3.8039642357173e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.92342210531347e-05!GO:0016564;transcription repressor activity;4.03938632612229e-05!GO:0006606;protein import into nucleus;4.79202810658466e-05!GO:0000323;lytic vacuole;4.79202810658466e-05!GO:0005764;lysosome;4.79202810658466e-05!GO:0008361;regulation of cell size;4.81579242493016e-05!GO:0006334;nucleosome assembly;4.88930873080803e-05!GO:0016049;cell growth;5.25285191758003e-05!GO:0009165;nucleotide biosynthetic process;5.45653008476552e-05!GO:0043021;ribonucleoprotein binding;5.45653008476552e-05!GO:0033116;ER-Golgi intermediate compartment membrane;6.91050980943871e-05!GO:0001558;regulation of cell growth;6.97675173641882e-05!GO:0003899;DNA-directed RNA polymerase activity;6.97675173641882e-05!GO:0030867;rough endoplasmic reticulum membrane;7.00492383576068e-05!GO:0005525;GTP binding;7.39321977680137e-05!GO:0005798;Golgi-associated vesicle;7.39321977680137e-05!GO:0032446;protein modification by small protein conjugation;7.73282343005309e-05!GO:0031497;chromatin assembly;8.78410083281878e-05!GO:0000314;organellar small ribosomal subunit;9.89307549733078e-05!GO:0005763;mitochondrial small ribosomal subunit;9.89307549733078e-05!GO:0016567;protein ubiquitination;0.000127898549827892!GO:0006612;protein targeting to membrane;0.000127898549827892!GO:0003724;RNA helicase activity;0.000128768514208805!GO:0051028;mRNA transport;0.000134518640746821!GO:0015980;energy derivation by oxidation of organic compounds;0.000135296995711267!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000153183249847132!GO:0009892;negative regulation of metabolic process;0.00017019096745394!GO:0051789;response to protein stimulus;0.000188412439933294!GO:0006986;response to unfolded protein;0.000188412439933294!GO:0031982;vesicle;0.00019946464273303!GO:0005769;early endosome;0.000202709667418888!GO:0016568;chromatin modification;0.000208452580943304!GO:0043623;cellular protein complex assembly;0.000209673507389021!GO:0019867;outer membrane;0.000212423494424988!GO:0031410;cytoplasmic vesicle;0.000234497585845874!GO:0005048;signal sequence binding;0.000253804726226402!GO:0006793;phosphorus metabolic process;0.000275081600321266!GO:0006796;phosphate metabolic process;0.000275081600321266!GO:0016563;transcription activator activity;0.000292081009300286!GO:0031968;organelle outer membrane;0.000292425586146493!GO:0000151;ubiquitin ligase complex;0.000292425586146493!GO:0003713;transcription coactivator activity;0.000293534959840917!GO:0051427;hormone receptor binding;0.000294992325780226!GO:0046474;glycerophospholipid biosynthetic process;0.000315326442265814!GO:0005791;rough endoplasmic reticulum;0.000335922715246059!GO:0006261;DNA-dependent DNA replication;0.000350438185271873!GO:0008610;lipid biosynthetic process;0.000360757911370002!GO:0008250;oligosaccharyl transferase complex;0.000361760026157829!GO:0005905;coated pit;0.00036450493801717!GO:0032561;guanyl ribonucleotide binding;0.00039498389430955!GO:0019001;guanyl nucleotide binding;0.00039498389430955!GO:0030036;actin cytoskeleton organization and biogenesis;0.000405417328418124!GO:0004576;oligosaccharyl transferase activity;0.000430938074130206!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00044816917757375!GO:0030663;COPI coated vesicle membrane;0.00045672022315441!GO:0030126;COPI vesicle coat;0.00045672022315441!GO:0019752;carboxylic acid metabolic process;0.000474190950404836!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000497371720583303!GO:0019843;rRNA binding;0.000498142192134981!GO:0007050;cell cycle arrest;0.000508693922802109!GO:0016310;phosphorylation;0.000511861412764129!GO:0006082;organic acid metabolic process;0.000518807840931228!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000521233047279038!GO:0005885;Arp2/3 protein complex;0.00056871765341869!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000582343628632295!GO:0035257;nuclear hormone receptor binding;0.000585364460854563!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000636415360633947!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000688725281875838!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000744183077864276!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0007533748176084!GO:0006950;response to stress;0.000836149184268523!GO:0051920;peroxiredoxin activity;0.000845972534892221!GO:0016363;nuclear matrix;0.000863118438166789!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000904996649418785!GO:0018196;peptidyl-asparagine modification;0.000915313497978406!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000915313497978406!GO:0043681;protein import into mitochondrion;0.000924652887323822!GO:0006626;protein targeting to mitochondrion;0.000933596472031826!GO:0030133;transport vesicle;0.00093814608196005!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00093814608196005!GO:0008033;tRNA processing;0.00101793090059383!GO:0003690;double-stranded DNA binding;0.00102062422842911!GO:0016126;sterol biosynthetic process;0.00108847266676277!GO:0046489;phosphoinositide biosynthetic process;0.00110959183625667!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00114054894383923!GO:0015399;primary active transmembrane transporter activity;0.00114054894383923!GO:0006383;transcription from RNA polymerase III promoter;0.00118986487608503!GO:0051329;interphase of mitotic cell cycle;0.00119038626147593!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.001244999739259!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00129951622301854!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00129951622301854!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00129951622301854!GO:0048522;positive regulation of cellular process;0.00129951622301854!GO:0005741;mitochondrial outer membrane;0.00133164813509965!GO:0016481;negative regulation of transcription;0.00141631463481831!GO:0006414;translational elongation;0.00145070709381205!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00153125797587578!GO:0030137;COPI-coated vesicle;0.00169843151038972!GO:0007006;mitochondrial membrane organization and biogenesis;0.0018885749472066!GO:0019899;enzyme binding;0.00190829209817106!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00191993994459278!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00191993994459278!GO:0008186;RNA-dependent ATPase activity;0.00193426676305507!GO:0005819;spindle;0.00193426676305507!GO:0044262;cellular carbohydrate metabolic process;0.00193426676305507!GO:0007010;cytoskeleton organization and biogenesis;0.00193994762786686!GO:0043284;biopolymer biosynthetic process;0.00210882550409635!GO:0030029;actin filament-based process;0.00221292843789354!GO:0007051;spindle organization and biogenesis;0.00222566619089552!GO:0048500;signal recognition particle;0.00223337704113259!GO:0051252;regulation of RNA metabolic process;0.00237409749106076!GO:0046483;heterocycle metabolic process;0.00258887057086138!GO:0050789;regulation of biological process;0.00272198554151976!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00274221780461971!GO:0048471;perinuclear region of cytoplasm;0.00311487732797381!GO:0031072;heat shock protein binding;0.00318423869631957!GO:0006839;mitochondrial transport;0.00336659236613926!GO:0005657;replication fork;0.00341371744151333!GO:0000775;chromosome, pericentric region;0.00341634013472779!GO:0030132;clathrin coat of coated pit;0.00365654643609534!GO:0046467;membrane lipid biosynthetic process;0.00375746432281926!GO:0015992;proton transport;0.00375746432281926!GO:0003729;mRNA binding;0.00380139666690759!GO:0006979;response to oxidative stress;0.00381830797027372!GO:0000096;sulfur amino acid metabolic process;0.00381830797027372!GO:0030176;integral to endoplasmic reticulum membrane;0.00384253099111184!GO:0008180;signalosome;0.00389333466728777!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00404606357629354!GO:0006818;hydrogen transport;0.00407874026654195!GO:0030134;ER to Golgi transport vesicle;0.0042951515156536!GO:0051168;nuclear export;0.0042951515156536!GO:0006497;protein amino acid lipidation;0.00443095596733708!GO:0030658;transport vesicle membrane;0.00457662769543547!GO:0016044;membrane organization and biogenesis;0.00459646988096036!GO:0000075;cell cycle checkpoint;0.00464330832881255!GO:0016197;endosome transport;0.00465533827845482!GO:0022890;inorganic cation transmembrane transporter activity;0.00474308018101321!GO:0004004;ATP-dependent RNA helicase activity;0.00477979119851602!GO:0050662;coenzyme binding;0.00481124514927967!GO:0015631;tubulin binding;0.00481580485573444!GO:0008168;methyltransferase activity;0.00494536673950335!GO:0051325;interphase;0.00506468214232037!GO:0040008;regulation of growth;0.00506468214232037!GO:0007243;protein kinase cascade;0.00506961510338559!GO:0042802;identical protein binding;0.00506961510338559!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00510224059293938!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00510224059293938!GO:0044452;nucleolar part;0.0052228211662955!GO:0004177;aminopeptidase activity;0.00554775154966225!GO:0016741;transferase activity, transferring one-carbon groups;0.00558329868636196!GO:0008632;apoptotic program;0.00559196511042182!GO:0006891;intra-Golgi vesicle-mediated transport;0.00559196511042182!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00559196511042182!GO:0045047;protein targeting to ER;0.00559196511042182!GO:0035258;steroid hormone receptor binding;0.00560865069286909!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00560865069286909!GO:0006740;NADPH regeneration;0.0056132092516526!GO:0006098;pentose-phosphate shunt;0.0056132092516526!GO:0030127;COPII vesicle coat;0.00563801742820534!GO:0012507;ER to Golgi transport vesicle membrane;0.00563801742820534!GO:0030880;RNA polymerase complex;0.00566797051150186!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0057321518558274!GO:0031901;early endosome membrane;0.0057321518558274!GO:0000786;nucleosome;0.00592398368262057!GO:0017166;vinculin binding;0.00604261217542625!GO:0006402;mRNA catabolic process;0.00615127761395948!GO:0048144;fibroblast proliferation;0.00619590193261516!GO:0048145;regulation of fibroblast proliferation;0.00619590193261516!GO:0008312;7S RNA binding;0.00634927468309969!GO:0005684;U2-dependent spliceosome;0.0067150673229523!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00673435560181425!GO:0015002;heme-copper terminal oxidase activity;0.00673435560181425!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00673435560181425!GO:0004129;cytochrome-c oxidase activity;0.00673435560181425!GO:0030027;lamellipodium;0.00676386334072825!GO:0006595;polyamine metabolic process;0.00684138611063558!GO:0051087;chaperone binding;0.0069866789037863!GO:0006118;electron transport;0.00709579031040072!GO:0051052;regulation of DNA metabolic process;0.00709684172139263!GO:0030145;manganese ion binding;0.00752657901582057!GO:0000049;tRNA binding;0.0075571665052627!GO:0016272;prefoldin complex;0.00758605117741687!GO:0043492;ATPase activity, coupled to movement of substances;0.00758605117741687!GO:0006695;cholesterol biosynthetic process;0.00772685411133604!GO:0003711;transcription elongation regulator activity;0.00803180604349034!GO:0006892;post-Golgi vesicle-mediated transport;0.00810284795037092!GO:0006520;amino acid metabolic process;0.00817084365431426!GO:0000059;protein import into nucleus, docking;0.00827617191024308!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00848073980935355!GO:0008047;enzyme activator activity;0.00856903018606294!GO:0009116;nucleoside metabolic process;0.00862047554104368!GO:0048146;positive regulation of fibroblast proliferation;0.00866960104893713!GO:0006302;double-strand break repair;0.00873001714691516!GO:0042158;lipoprotein biosynthetic process;0.00873001714691516!GO:0006509;membrane protein ectodomain proteolysis;0.00873001714691516!GO:0033619;membrane protein proteolysis;0.00873001714691516!GO:0000339;RNA cap binding;0.00875861132448823!GO:0008094;DNA-dependent ATPase activity;0.00877318276598557!GO:0009112;nucleobase metabolic process;0.00880994698360418!GO:0051287;NAD binding;0.00896656899200911!GO:0031902;late endosome membrane;0.00902635343847116!GO:0043488;regulation of mRNA stability;0.00904041271420115!GO:0043487;regulation of RNA stability;0.00904041271420115!GO:0030659;cytoplasmic vesicle membrane;0.00961411541923964!GO:0003678;DNA helicase activity;0.00967847369555085!GO:0005869;dynactin complex;0.00991298908171257!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00991386535631403!GO:0022408;negative regulation of cell-cell adhesion;0.00993716547823101!GO:0005586;collagen type III;0.0101713544395627!GO:0003746;translation elongation factor activity;0.0102514270974127!GO:0016860;intramolecular oxidoreductase activity;0.0102550154108636!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0106499023633624!GO:0043022;ribosome binding;0.0106529482363223!GO:0006506;GPI anchor biosynthetic process;0.010659087300425!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0107838284220468!GO:0030660;Golgi-associated vesicle membrane;0.0108130877154553!GO:0019222;regulation of metabolic process;0.0109412096774781!GO:0030118;clathrin coat;0.0109438032478741!GO:0000776;kinetochore;0.0109569049600823!GO:0003684;damaged DNA binding;0.0109926558446002!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0111175773031461!GO:0008092;cytoskeletal protein binding;0.0111313638701477!GO:0001726;ruffle;0.0111805457032687!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0115869600279105!GO:0006289;nucleotide-excision repair;0.0116224040600767!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0117746897588732!GO:0000428;DNA-directed RNA polymerase complex;0.0117746897588732!GO:0030521;androgen receptor signaling pathway;0.011907358571992!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.011912713369215!GO:0065009;regulation of a molecular function;0.0119551894166131!GO:0048037;cofactor binding;0.012301284657497!GO:0016251;general RNA polymerase II transcription factor activity;0.0123933783512762!GO:0007034;vacuolar transport;0.0127574182461403!GO:0031124;mRNA 3'-end processing;0.012884286283696!GO:0050681;androgen receptor binding;0.0132121862751438!GO:0048487;beta-tubulin binding;0.0134860533995068!GO:0008243;plasminogen activator activity;0.0136200626069872!GO:0016408;C-acyltransferase activity;0.0143944618148381!GO:0006505;GPI anchor metabolic process;0.0144019187170607!GO:0048518;positive regulation of biological process;0.0147896065105351!GO:0031529;ruffle organization and biogenesis;0.0149763844993368!GO:0006401;RNA catabolic process;0.0149763844993368!GO:0008139;nuclear localization sequence binding;0.0149763844993368!GO:0008652;amino acid biosynthetic process;0.015014257512119!GO:0051128;regulation of cellular component organization and biogenesis;0.015144816619323!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0155845187686824!GO:0006275;regulation of DNA replication;0.0160389560952912!GO:0006790;sulfur metabolic process;0.016288876359057!GO:0005832;chaperonin-containing T-complex;0.0171546871951549!GO:0051539;4 iron, 4 sulfur cluster binding;0.0174496457565238!GO:0006650;glycerophospholipid metabolic process;0.0179186065876208!GO:0005637;nuclear inner membrane;0.0180237083122605!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0180237083122605!GO:0045045;secretory pathway;0.0180237083122605!GO:0006778;porphyrin metabolic process;0.0182102351156211!GO:0033013;tetrapyrrole metabolic process;0.0182102351156211!GO:0001953;negative regulation of cell-matrix adhesion;0.0182102351156211!GO:0006007;glucose catabolic process;0.0183710445086882!GO:0007021;tubulin folding;0.0184673493416091!GO:0006354;RNA elongation;0.0186914395543134!GO:0045792;negative regulation of cell size;0.0187370123909381!GO:0030308;negative regulation of cell growth;0.0188446081685123!GO:0005583;fibrillar collagen;0.0188707721636344!GO:0003682;chromatin binding;0.0189986889207087!GO:0003756;protein disulfide isomerase activity;0.0192805856371925!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0192805856371925!GO:0005862;muscle thin filament tropomyosin;0.0196428476997179!GO:0001527;microfibril;0.0199964563943578!GO:0008154;actin polymerization and/or depolymerization;0.0202587145828803!GO:0030384;phosphoinositide metabolic process;0.02037654560633!GO:0032984;macromolecular complex disassembly;0.0205793397027607!GO:0000082;G1/S transition of mitotic cell cycle;0.020857465698903!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.020857465698903!GO:0007052;mitotic spindle organization and biogenesis;0.020857465698903!GO:0044433;cytoplasmic vesicle part;0.0211012780977326!GO:0035035;histone acetyltransferase binding;0.0212234894386345!GO:0004527;exonuclease activity;0.0214502108906606!GO:0007040;lysosome organization and biogenesis;0.0220961294299889!GO:0006769;nicotinamide metabolic process;0.0222830014053862!GO:0000209;protein polyubiquitination;0.022372461573666!GO:0006352;transcription initiation;0.022372461573666!GO:0042168;heme metabolic process;0.0224089449473045!GO:0008022;protein C-terminus binding;0.0228753260362118!GO:0004287;prolyl oligopeptidase activity;0.0238112121044636!GO:0043433;negative regulation of transcription factor activity;0.0238112121044636!GO:0030125;clathrin vesicle coat;0.0240561690837008!GO:0030665;clathrin coated vesicle membrane;0.0240561690837008!GO:0030508;thiol-disulfide exchange intermediate activity;0.0240759789615102!GO:0006378;mRNA polyadenylation;0.0244562117483722!GO:0030032;lamellipodium biogenesis;0.0249918782861491!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0252417109553287!GO:0006739;NADP metabolic process;0.0253437086023039!GO:0051271;negative regulation of cell motility;0.0259153944528966!GO:0047485;protein N-terminus binding;0.0272773003101406!GO:0005669;transcription factor TFIID complex;0.0273433214858495!GO:0031371;ubiquitin conjugating enzyme complex;0.0273484674265594!GO:0009967;positive regulation of signal transduction;0.0277998277635261!GO:0051270;regulation of cell motility;0.0280245813632174!GO:0005758;mitochondrial intermembrane space;0.0295920661758863!GO:0000097;sulfur amino acid biosynthetic process;0.0296087685178765!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0301870808850379!GO:0006417;regulation of translation;0.030398645280638!GO:0033673;negative regulation of kinase activity;0.030632118497726!GO:0006469;negative regulation of protein kinase activity;0.030632118497726!GO:0001872;zymosan binding;0.0307412778001013!GO:0001878;response to yeast;0.0307412778001013!GO:0031543;peptidyl-proline dioxygenase activity;0.031058672410248!GO:0015036;disulfide oxidoreductase activity;0.0316590895567153!GO:0030041;actin filament polymerization;0.0320868198746136!GO:0043065;positive regulation of apoptosis;0.0324293825464807!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0336603733385039!GO:0046519;sphingoid metabolic process;0.0337733563512601!GO:0006144;purine base metabolic process;0.0339470897173887!GO:0005801;cis-Golgi network;0.0342050848752249!GO:0051348;negative regulation of transferase activity;0.0345490706115444!GO:0012506;vesicle membrane;0.0346201614978099!GO:0050811;GABA receptor binding;0.0349540708327307!GO:0019798;procollagen-proline dioxygenase activity;0.0355163115999047!GO:0005096;GTPase activator activity;0.0357071362127614!GO:0008147;structural constituent of bone;0.036331606243077!GO:0043241;protein complex disassembly;0.0364196923130312!GO:0006310;DNA recombination;0.0369088144500786!GO:0045941;positive regulation of transcription;0.0377359854485269!GO:0030518;steroid hormone receptor signaling pathway;0.0380722586476512!GO:0006693;prostaglandin metabolic process;0.0387998908685457!GO:0006692;prostanoid metabolic process;0.0387998908685457!GO:0003923;GPI-anchor transamidase activity;0.0389060657077823!GO:0016255;attachment of GPI anchor to protein;0.0389060657077823!GO:0042765;GPI-anchor transamidase complex;0.0389060657077823!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0399171060194733!GO:0005774;vacuolar membrane;0.0403170693492695!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0409740630901827!GO:0019206;nucleoside kinase activity;0.0410060701051547!GO:0043068;positive regulation of programmed cell death;0.0415458178920827!GO:0009081;branched chain family amino acid metabolic process;0.0419692125591977!GO:0008234;cysteine-type peptidase activity;0.042387066310414!GO:0031123;RNA 3'-end processing;0.0429117940640481!GO:0008538;proteasome activator activity;0.0429796016623077!GO:0030119;AP-type membrane coat adaptor complex;0.0437813786606575!GO:0007033;vacuole organization and biogenesis;0.0441287130827044!GO:0030911;TPR domain binding;0.0441513898419756!GO:0043414;biopolymer methylation;0.0444088791060905!GO:0016125;sterol metabolic process;0.0446462532506717!GO:0006733;oxidoreduction coenzyme metabolic process;0.0446462532506717!GO:0009119;ribonucleoside metabolic process;0.0448948342320282!GO:0009303;rRNA transcription;0.0450229910034001!GO:0043624;cellular protein complex disassembly;0.045458680669173!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0458895925449892!GO:0016407;acetyltransferase activity;0.0459348141811418!GO:0007041;lysosomal transport;0.0460591858898541!GO:0006368;RNA elongation from RNA polymerase II promoter;0.046187887839201!GO:0001952;regulation of cell-matrix adhesion;0.0463169397989812!GO:0045892;negative regulation of transcription, DNA-dependent;0.0464318252726711!GO:0007030;Golgi organization and biogenesis;0.0464862698741543!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0473541646684445!GO:0004448;isocitrate dehydrogenase activity;0.0476860830655971!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0489934329928864!GO:0042157;lipoprotein metabolic process;0.0490723658539671!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0490723658539671!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0490723658539671!GO:0006672;ceramide metabolic process;0.0490723658539671!GO:0006376;mRNA splice site selection;0.0490723658539671!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0490723658539671!GO:0009225;nucleotide-sugar metabolic process;0.0492045182079539!GO:0006767;water-soluble vitamin metabolic process;0.0492045182079539!GO:0006807;nitrogen compound metabolic process;0.049292854562061!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0493362653888786!GO:0048468;cell development;0.0497364960529473
|sample_id=11749
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=adipose tissue
|top_motifs=ALX4:1.56861303494;EN1,2:1.52438826779;HOX{A5,B5}:1.40539437554;GZF1:1.35735976835;HOX{A4,D4}:1.31045526668;PAX8:1.28347621413;TAL1_TCF{3,4,12}:1.25070304732;FOX{I1,J2}:1.21894645668;GFI1B:1.11639466296;UFEwm:1.08289891581;IKZF1:1.07651640029;XBP1:1.04472739086;ZNF238:0.994547303023;PAX4:0.990441355111;MYBL2:0.897815858827;NFE2L2:0.871131911529;KLF4:0.867112380132;FOXQ1:0.822187795301;PAX1,9:0.812250798109;NKX3-2:0.799888499641;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.7859768372;NFE2L1:0.760319266343;SPZ1:0.754741588504;GLI1..3:0.739230112117;RXR{A,B,G}:0.735810183455;GCM1,2:0.730600380934;HIF1A:0.691805410181;TLX1..3_NFIC{dimer}:0.688838308633;NR3C1:0.673012753408;RFX1:0.669027669627;RXRA_VDR{dimer}:0.646946213655;HES1:0.628648211052;NFIX:0.603243665916;ESR1:0.583994190228;PRDM1:0.582045139103;HLF:0.580238941509;ATF6:0.578674518592;POU3F1..4:0.575000927793;TEAD1:0.574389311174;AR:0.553984677217;SRF:0.54727503116;YY1:0.540739394702;EBF1:0.539479370379;CDC5L:0.538438486511;TFCP2:0.532154358653;HSF1,2:0.525411480233;SOX17:0.512878220331;ZNF423:0.491023524436;NR6A1:0.471571990132;NFATC1..3:0.4405017822;NKX3-1:0.439850962558;STAT2,4,6:0.436602666976;NKX2-2,8:0.428763730549;ARID5B:0.426277880458;GTF2I:0.411233243846;FOS_FOS{B,L1}_JUN{B,D}:0.360284984603;EVI1:0.350214397974;HAND1,2:0.340342777619;DBP:0.333712378669;GFI1:0.328470360625;ZNF384:0.315175090475;BACH2:0.308579369447;TFAP4:0.305777518921;NANOG{mouse}:0.294124574894;TBP:0.293775798971;POU6F1:0.270863360972;TP53:0.257520097461;HBP1_HMGB_SSRP1_UBTF:0.250290632092;EP300:0.234671386948;AHR_ARNT_ARNT2:0.230518276475;MYB:0.223793898763;TBX4,5:0.223531298044;bHLH_family:0.207771500699;LHX3,4:0.204103802265;ZBTB16:0.170085231166;ALX1:0.168985056357;TEF:0.161529365239;ZBTB6:0.139925301093;MZF1:0.105869627153;ZIC1..3:0.0922433612851;FOXO1,3,4:0.0702677460125;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0654054025926;GATA4:0.0638093789001;RUNX1..3:0.063769965432;ELK1,4_GABP{A,B1}:0.0619815933893;NFE2:0.0597808037382;NRF1:0.0537973328676;MAFB:0.0527858684334;AIRE:0.0431130465594;ZNF148:0.0340188028343;HMX1:0.0227578686621;FOSL2:0.00124295982003;PAX2:-0.00803149238013;NKX2-1,4:-0.012769094931;CEBPA,B_DDIT3:-0.0130518763369;MYFfamily:-0.0337670648027;ZNF143:-0.0392491745196;ATF2:-0.0396528999929;DMAP1_NCOR{1,2}_SMARC:-0.0422750429443;PATZ1:-0.0529978478559;NR5A1,2:-0.0599281303345;E2F1..5:-0.080285301045;STAT1,3:-0.10543574975;RREB1:-0.108977870626;HNF1A:-0.109610759662;HOXA9_MEIS1:-0.11081088714;ELF1,2,4:-0.122553247148;NKX6-1,2:-0.141859229208;RFX2..5_RFXANK_RFXAP:-0.159807350516;SMAD1..7,9:-0.162594961133;VSX1,2:-0.171137085484;IRF1,2:-0.176840063124;NKX2-3_NKX2-5:-0.187337478937;STAT5{A,B}:-0.205597857727;FOXM1:-0.208317383262;XCPE1{core}:-0.253271478686;MEF2{A,B,C,D}:-0.254015942053;NHLH1,2:-0.260863092975;ONECUT1,2:-0.265379427174;ESRRA:-0.26735575436;TLX2:-0.281671156419;PRRX1,2:-0.283574462363;NFIL3:-0.29824639402;CREB1:-0.30446435691;FOXN1:-0.334062518222;MTE{core}:-0.338337584463;REST:-0.33907053811;LEF1_TCF7_TCF7L1,2:-0.350179601755;TGIF1:-0.351612283965;HNF4A_NR2F1,2:-0.356386957714;ATF5_CREB3:-0.38126827069;IRF7:-0.386002292209;FOXL1:-0.390967491178;SPI1:-0.402359900506;GTF2A1,2:-0.408843770444;NANOG:-0.414949717587;NFKB1_REL_RELA:-0.417823154499;MAZ:-0.423191253248;TFAP2{A,C}:-0.462188555882;JUN:-0.464808247833;MED-1{core}:-0.477029344832;PAX3,7:-0.480539793881;ATF4:-0.487797437325;FOXD3:-0.496121320933;PAX5:-0.505684502828;HOX{A6,A7,B6,B7}:-0.512000098374;ADNP_IRX_SIX_ZHX:-0.51576230447;TOPORS:-0.520917631415;CDX1,2,4:-0.521626778359;PDX1:-0.53646106205;ZFP161:-0.539234309277;ETS1,2:-0.539426049328;NR1H4:-0.548643585996;PAX6:-0.555311191892;GATA6:-0.558919400908;SOX2:-0.564299456688;POU5F1:-0.572785160968;BPTF:-0.573871079321;POU1F1:-0.575931892362;POU2F1..3:-0.581382305276;SPIB:-0.586985607568;SOX{8,9,10}:-0.588391873021;FOXA2:-0.594820085115;FOXP3:-0.598607128331;PBX1:-0.605787082297;LMO2:-0.617449613728;EGR1..3:-0.627867186293;FOX{D1,D2}:-0.63686959748;SREBF1,2:-0.64341247161;SOX5:-0.655869292205;NFY{A,B,C}:-0.661518293745;TFAP2B:-0.675766190714;HIC1:-0.699943870561;HMGA1,2:-0.712470387881;MTF1:-0.755136240626;TFDP1:-0.76170974581;ZEB1:-0.824568438679;SNAI1..3:-0.835366898249;CUX2:-0.853512455794;CRX:-0.861226818037;RBPJ:-0.884457682095;PPARG:-0.946807195324;RORA:-0.952899131116;OCT4_SOX2{dimer}:-0.953732855089;FOXP1:-0.969732601124;SP1:-1.04093909509;T:-1.09954889372;IKZF2:-1.11276052085;MYOD1:-1.13109083758;BREu{core}:-1.17683694871;PITX1..3:-1.2126003996;FOX{F1,F2,J1}:-1.32643899451
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11749-123G3;search_select_hide=table117:FF:11749-123G3
}}
}}

Latest revision as of 18:17, 4 June 2020

Name:mesenchymal precursor cell - adipose, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12365
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueadipose tissue
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005254
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12365 CAGE DRX008547 DRR009419
Accession ID Hg19

Library idBAMCTSS
CNhs12365 DRZ000844 DRZ002229
Accession ID Hg38

Library idBAMCTSS
CNhs12365 DRZ012194 DRZ013579
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0709
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.192
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.108
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.151
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.607
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.00854
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0252
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0414
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0525
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.192
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.0579
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.192
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.181
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.192
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.324
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.577
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.192
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.324
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.577
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.884
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12365

Jaspar motifP-value
MA0002.20.655
MA0003.10.36
MA0004.10.757
MA0006.10.967
MA0007.10.36
MA0009.10.125
MA0014.10.659
MA0017.10.795
MA0018.21.01248e-5
MA0019.10.841
MA0024.10.0428
MA0025.10.00254
MA0027.10.322
MA0028.10.869
MA0029.10.255
MA0030.10.00259
MA0031.10.0163
MA0035.20.105
MA0038.10.0606
MA0039.20.169
MA0040.10.259
MA0041.10.4
MA0042.10.675
MA0043.10.00809
MA0046.10.0457
MA0047.20.477
MA0048.10.321
MA0050.10.035
MA0051.10.378
MA0052.10.269
MA0055.10.299
MA0057.10.587
MA0058.10.746
MA0059.10.0369
MA0060.19.33417e-7
MA0061.10.976
MA0062.20.0174
MA0065.20.841
MA0066.10.473
MA0067.10.0175
MA0068.10.0627
MA0069.10.226
MA0070.10.386
MA0071.10.566
MA0072.10.56
MA0073.10.904
MA0074.10.554
MA0076.10.937
MA0077.10.273
MA0078.10.747
MA0079.20.0857
MA0080.28.92513e-7
MA0081.10.034
MA0083.10.00905
MA0084.10.452
MA0087.10.804
MA0088.10.13
MA0090.10.101
MA0091.10.0067
MA0092.10.112
MA0093.10.811
MA0099.21.17139e-4
MA0100.10.848
MA0101.10.085
MA0102.20.788
MA0103.10.0015
MA0104.20.345
MA0105.10.0106
MA0106.10.00682
MA0107.10.0217
MA0108.20.863
MA0111.10.98
MA0112.20.00129
MA0113.10.185
MA0114.10.79
MA0115.10.416
MA0116.10.00194
MA0117.10.929
MA0119.10.0125
MA0122.10.477
MA0124.10.29
MA0125.10.245
MA0131.10.75
MA0135.10.0507
MA0136.19.15019e-6
MA0137.20.174
MA0138.20.803
MA0139.10.672
MA0140.10.464
MA0141.10.244
MA0142.10.767
MA0143.10.285
MA0144.10.184
MA0145.10.161
MA0146.10.957
MA0147.10.12
MA0148.10.75
MA0149.10.698
MA0150.10.225
MA0152.10.00112
MA0153.10.982
MA0154.10.0881
MA0155.10.704
MA0156.10.00202
MA0157.10.745
MA0159.10.269
MA0160.10.46
MA0162.10.204
MA0163.11.5394e-6
MA0164.10.764
MA0258.10.293
MA0259.10.266



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12365

Novel motifP-value
10.101
100.12
1000.886
1010.988
1020.0192
1030.141
1040.804
1050.225
1060.861
1070.84
1080.653
1090.378
110.143
1100.0204
1110.787
1120.0364
1130.035
1140.0638
1150.714
1160.105
1170.138
1180.806
1190.836
120.781
1200.135
1210.734
1220.0155
1230.00529
1240.407
1250.966
1260.641
1270.849
1280.757
1290.8
130.125
1300.727
1310.401
1320.941
1330.36
1340.419
1350.871
1360.457
1370.93
1380.774
1390.492
140.229
1400.846
1410.529
1420.378
1430.567
1440.625
1450.805
1460.499
1470.0367
1480.516
1490.0262
150.398
1500.563
1510.776
1520.834
1530.45
1540.873
1550.00704
1560.672
1570.855
1580.00691
1590.0865
160.00478
1600.306
1610.758
1620.787
1630.314
1640.0261
1650.622
1660.0609
1670.662
1680.667
1690.00828
170.55
180.0568
190.0334
20.394
200.266
210.187
220.213
230.272
240.705
250.817
260.213
270.267
280.254
290.0612
30.205
300.727
310.888
328.49958e-11
330.581
340.967
350.282
360.451
370.0601
380.889
390.161
40.307
400.572
410.987
420.713
430.207
440.672
450.858
460.122
470.581
480.471
490.787
50.466
500.555
510.482
520.87
530.0966
540.687
550.0748
560.999
570.741
580.728
590.117
60.146
600.733
610.922
620.3
630.319
640.657
650.501
660.721
670.598
680.644
690.532
70.569
700.228
710.00609
720.78
730.504
740.00781
750.139
760.674
770.0304
780.0915
790.0767
80.0101
800.869
810.277
820.308
830.677
840.782
850.229
860.37
870.352
880.489
890.0503
90.248
900.391
910.455
920.117
930.822
940.573
950.13
960.849
970.186
980.807
990.00827



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12365


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002570 (mesenchymal stem cell of adipose)

UBERON: Anatomy
0001013 (adipose tissue)
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000270 (mesenchymal precursor cell of adipose)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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