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(Created page with "{{f5samples |id=FF:11753-123G7 |name=mesenchymal precursor cell - cardiac, donor2 |sample_id=11753 |rna_tube_id=123G7 |rna_box=123 |rna_position=G7 |sample_cell_lot=HH-...")
 
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{{f5samples
{{f5samples
|id=FF:11753-123G7
|DRA_sample_Accession=CAGE@SAMD00005181
|name=mesenchymal precursor cell - cardiac, donor2
|accession_numbers=CAGE;DRX008552;DRR009424;DRZ000849;DRZ002234;DRZ012199;DRZ013584
|sample_id=11753
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009
|rna_tube_id=123G7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0002494,CL:0000034,CL:0000569
|rna_box=123
|rna_position=G7
|sample_cell_lot=HH-354-AD
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=heart
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.14000
|rna_od260/280=2.07000
|sample_cell_type=mesenchymal precursor cell
|sample_cell_line=
|sample_collaboration=Claudio Schneider LNCIB
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=41.62425
|rna_concentration=0.55499
|sample_note=
|profile_hcage=CNhs12369,LSID914,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000011,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000133,CL:0000134,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000333,CL:0000548,CL:0000569,CL:0000723,CL:0002320,CL:0002321,CL:0002371,CL:0002494
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000061,UBERON:0000062,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000948,UBERON:0001009,UBERON:0001048,UBERON:0001062,UBERON:0002050,UBERON:0002384,UBERON:0002532,UBERON:0003081,UBERON:0003084,UBERON:0003914,UBERON:0004120,UBERON:0004140,UBERON:0004141,UBERON:0004291,UBERON:0004535,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0005498,UBERON:0007005,UBERON:0007100
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000271
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:19558373..19558392,-!p1@OSR1!1.86!186.62!OSR1;;chr1:170632285..170632309,+!p1@PRRX1!1.71!56.71!PRRX1;;chr20:50179368..50179392,-!p2@NFATC2!1.50!39.47!NFATC2;;chr8:11561684..11561751,+!p1@GATA4!1.50!30.85!GATA4;;chr6:134210243..134210257,+!p1@TCF21!1.50!30.70!TCF21;;chr8:25902876..25902936,-!p1@EBF2!1.42!25.56!EBF2;;chr19:45971246..45971265,+!p1@FOSB!1.36!388.97!FOSB;;chr1:170633348..170633399,+!p2@PRRX1!1.36!29.34!PRRX1;;chr8:22550982..22550999,-!p1@EGR3!1.35!59.43!EGR3;;chr11:46299199..46299233,+!p1@CREB3L1!1.30!95.88!CREB3L1;;chr1:170633262..170633285,+!p3@PRRX1!1.29!21.02!PRRX1;;chr4:174451370..174451387,-!p1@HAND2!1.29!18.60!HAND2;;chr3:141105705..141105770,+!p4@ZBTB38!1.28!21.93!ZBTB38;;chr19:54041669..54041697,+!p2@ZNF331!1.25!16.94!ZNF331;;chr21:36260773..36260804,-!p7@RUNX1!1.21!20.26!RUNX1;;chr7:35293685..35293718,-!p1@TBX20!1.20!14.82!TBX20;;chr4:174450089..174450153,-!p2@HAND2!1.17!13.76!HAND2;;chr12:52445218..52445237,+!p1@NR4A1!1.16!168.62!NR4A1;;chr9:102584159..102584174,+!p2@NR4A3!1.15!23.44!NR4A3;;chr19:13134772..13134822,+!p2@NFIX!1.12!18.15!NFIX;;chr10:64576105..64576133,-!p1@EGR2!1.10!23.74!EGR2;;chr14:75745523..75745537,+!p1@FOS!1.06!1255.37!FOS;;chr3:5021268..5021282,+!p4@BHLHE40!1.06!21.47!BHLHE40;;chr19:54058073..54058088,+!p1@ZNF331!1.06!10.59!ZNF331;;chr15:67430351..67430366,+!p10@SMAD3!1.04!9.98!SMAD3;;chr2:45236540..45236577,-!p1@SIX2!1.02!9.38!SIX2;;chr9:110252035..110252057,-!p1@KLF4!1.01!149.11!KLF4;;chr7:19157248..19157268,-!p1@TWIST1!1.00!25.41!TWIST1;;chr11:46299539..46299620,+!p2@CREB3L1!0.97!14.37!CREB3L1;;chr2:157189180..157189290,-!p1@NR4A2!0.96!43.40!NR4A2;;chr14:75746722..75746777,+!p2@FOS!0.96!10.59!FOS;;chr10:131762504..131762555,-!p1@EBF3!0.96!8.17!EBF3;;chr12:66218598..66218645,+!p2@HMGA2!0.95!38.11!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!0.95!25.56!GATA6;;chr18:19749386..19749404,+!p2@GATA6!0.92!10.59!GATA6;;chr20:51588873..51588953,+!p1@TSHZ2!0.92!9.83!TSHZ2;;chr19:50432453..50432468,+!p1@ATF5!0.91!419.21!ATF5;;chr8:49833948..49833973,-!p2@SNAI2!0.91!47.03!SNAI2;;chr15:42749722..42749739,-!p2@ZFP106!0.89!12.55!ZFP106;;chr2:239756671..239756732,+!p1@TWIST2!0.88!21.93!TWIST2;;chr16:31076332..31076388,-!p3@ZNF668!0.88!6.65!ZNF668;;chr17:1959369..1959388,+!p2@HIC1!0.86!17.39!HIC1;;chr19:16435523..16435619,+!p2@KLF2!0.86!8.77!KLF2;;chr1:170632959..170632987,+!p4@PRRX1!0.84!6.50!PRRX1;;chr15:67418177..67418204,+!p9@SMAD3!0.84!5.90!SMAD3;;chr10:63809106..63809127,+!p1@ARID5B!0.83!83.03!ARID5B;;chr11:65687362..65687436,+!p3@DRAP1!0.83!27.98!DRAP1;;chr8:49833978..49833996,-!p1@SNAI2!0.82!123.25!SNAI2;;chr5:92918919..92918942,+!p1@NR2F1!0.80!25.26!NR2F1;;chr12:66218255..66218304,+!p3@HMGA2!0.80!15.12!HMGA2;;chr9:102584262..102584276,+!p1@NR4A3!0.80!12.40!NR4A3;;chr9:16870710..16870763,-!p1@BNC2!0.80!9.53!BNC2;;chr1:158979872..158979898,+!p3@IFI16!0.79!17.24!IFI16;;chr9:16870659..16870675,-!p2@BNC2!0.79!6.50!BNC2;;chr1:170632477..170632506,+!p6@PRRX1!0.79!5.14!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.79!5.14!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.79!5.14!PRRX1;;chr12:72056800..72056834,+!p1@THAP2!0.78!6.96!THAP2;;chr19:13135386..13135435,+!p4@NFIX!0.77!4.84!NFIX;;chr2:19558327..19558334,-!p2@OSR1!0.77!4.84!OSR1;;chr17:1958388..1958404,+!p1@HIC1!0.76!33.12!HIC1;;chr1:59249688..59249703,-!p3@JUN!0.76!31.46!JUN;;chr5:137804484..137804498,+!p2@EGR1!0.76!20.72!EGR1;;chr1:158985493..158985535,+!p4@IFI16!0.75!7.41!IFI16;;chr7:19157043..19157088,-!p2@TWIST1!0.74!12.10!TWIST1;;chr1:164528911..164528940,+!p7@PBX1!0.74!6.96!PBX1;;chr3:157823517..157823562,-!p1@SHOX2!0.74!4.84!SHOX2;;chr2:102091144..102091183,-!p2@RFX8!0.74!4.54!RFX8;;chr1:170632250..170632277,+!p7@PRRX1!0.74!4.54!PRRX1;;chr11:65686732..65686756,+!p2@DRAP1!0.73!20.42!DRAP1;;chr19:50435736..50435781,+!p3@ATF5!0.73!6.20!ATF5;;chr1:170632647..170632659,+!p17@PRRX1!0.73!4.39!PRRX1;;chr2:102091566..102091581,-!p1@RFX8!0.73!4.39!RFX8;;chr15:67458491..67458505,+!p18@SMAD3!0.72!4.23!SMAD3;;chr1:170632137..170632172,+!p10@PRRX1!0.72!4.23!PRRX1;;chr3:141087393..141087426,+!p3@ZBTB38!0.71!18.15!ZBTB38;;chr3:12329397..12329433,+!p2@PPARG!0.71!10.28!PPARG;;chr3:25470156..25470227,+!p2@RARB!0.71!4.08!RARB;;chr1:170633058..170633084,+!p5@PRRX1!0.71!4.08!PRRX1;;chr11:46299443..46299459,+!p4@CREB3L1!0.71!4.08!CREB3L1;;chr14:62162258..62162269,+!p2@HIF1A!0.70!44.01!HIF1A;;chr2:145275162..145275202,-!p2@ZEB2!0.70!26.62!ZEB2;;chr12:53614115..53614154,-!p1@RARG!0.70!24.05!RARG;;chr17:46655704..46655718,-!p2@HOXB4!0.70!6.35!HOXB4;;chr8:106330656..106330684,+!p1@ZFPM2!0.69!11.34!ZFPM2;;chr15:67418047..67418093,+!p4@SMAD3!0.69!5.14!SMAD3;;chr15:67418119..67418162,+!p5@SMAD3!0.69!4.39!SMAD3;;chr1:170633245..170633256,+!p14@PRRX1!0.69!3.93!PRRX1;;chr10:63809077..63809089,+!p5@ARID5B!0.68!8.92!ARID5B;;chr6:85474299..85474324,-!p1@TBX18!0.68!7.26!TBX18;;chr15:67430381..67430396,+!p21@SMAD3!0.68!3.78!SMAD3;;chr3:141087454..141087465,+!p19@ZBTB38!0.68!3.78!ZBTB38;;chr1:158979792..158979814,+!p2@IFI1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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000569;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002494;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000948
|ffid_belonging_in_development=CL:0000133,CL:0000134,CL:0000011,CL:0000221
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor2.CNhs12369.11753-123G7.hg38.nobarcode.ctss.bed.gz
|id=FF:11753-123G7
|is_a=EFO:0002091;;FF:0000271
|is_obsolete=
|library_id=CNhs12369
|library_id_phase_based=2:CNhs12369
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11753
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11753
|name=mesenchymal precursor cell - cardiac, donor2
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12369,LSID914,release011,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
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|rna_box=123
|rna_catalog_number=
|rna_concentration=0.55499
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=2.14
|rna_od260/280=2.07
|rna_position=G7
|rna_rin=
|rna_sample_type=
|rna_tube_id=123G7
|rna_weight_ug=41.62425
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=HH-354-AD
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.2747982029032e-210!GO:0005737;cytoplasm;2.94371211673375e-193!GO:0043226;organelle;1.79333682069663e-160!GO:0043229;intracellular organelle;5.02123329967362e-160!GO:0043231;intracellular membrane-bound organelle;7.28969524951563e-160!GO:0043227;membrane-bound organelle;1.31721496836009e-159!GO:0044444;cytoplasmic part;3.16401871846098e-144!GO:0044422;organelle part;3.83937591780451e-117!GO:0044446;intracellular organelle part;9.50883812078124e-116!GO:0032991;macromolecular complex;8.44766696240737e-79!GO:0005515;protein binding;1.53000804493647e-78!GO:0044238;primary metabolic process;1.12449633087245e-75!GO:0044237;cellular metabolic process;1.74506474471119e-75!GO:0030529;ribonucleoprotein complex;5.38189737440661e-75!GO:0043170;macromolecule metabolic process;7.14792374014925e-68!GO:0005739;mitochondrion;1.24098511860668e-61!GO:0043233;organelle lumen;2.4660150539616e-61!GO:0031974;membrane-enclosed lumen;2.4660150539616e-61!GO:0003723;RNA binding;5.70219401303251e-58!GO:0044428;nuclear part;4.93843875497862e-55!GO:0031090;organelle membrane;1.78458253243525e-53!GO:0005634;nucleus;1.61261909012866e-49!GO:0019538;protein metabolic process;1.80654826019698e-49!GO:0005840;ribosome;7.6387197705409e-47!GO:0015031;protein transport;1.25993309125826e-44!GO:0006412;translation;1.7880012334524e-44!GO:0044260;cellular macromolecule metabolic process;2.43628394460136e-44!GO:0044267;cellular protein metabolic process;2.04274124927785e-43!GO:0033036;macromolecule localization;3.03109881428232e-43!GO:0045184;establishment of protein localization;1.40980485339206e-41!GO:0016043;cellular component organization and biogenesis;1.50212503566808e-41!GO:0009058;biosynthetic process;4.77536065761329e-41!GO:0044429;mitochondrial part;4.77536065761329e-41!GO:0003735;structural constituent of ribosome;8.24618195166948e-41!GO:0005829;cytosol;1.0331677434861e-40!GO:0008104;protein localization;1.3630822899034e-40!GO:0006396;RNA processing;1.42836405940998e-38!GO:0043234;protein complex;6.21256945534733e-38!GO:0031967;organelle envelope;6.55737803529807e-37!GO:0031975;envelope;1.14278711278008e-36!GO:0033279;ribosomal subunit;1.88695146033511e-36!GO:0044249;cellular biosynthetic process;2.9405530542208e-36!GO:0009059;macromolecule biosynthetic process;2.9405530542208e-36!GO:0046907;intracellular transport;3.45745431969773e-35!GO:0031981;nuclear lumen;7.46464196155127e-34!GO:0043283;biopolymer metabolic process;1.1474969339767e-32!GO:0016071;mRNA metabolic process;9.27240410291505e-32!GO:0010467;gene expression;3.33939763098074e-31!GO:0006886;intracellular protein transport;1.01739392953717e-29!GO:0008380;RNA splicing;1.89730984875568e-29!GO:0005740;mitochondrial envelope;1.64570363877211e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.11256402230205e-27!GO:0006397;mRNA processing;6.1594526570823e-27!GO:0031966;mitochondrial membrane;6.53622084687563e-26!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.42077477496683e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.86437892030819e-25!GO:0019866;organelle inner membrane;2.27688022322406e-24!GO:0005783;endoplasmic reticulum;4.45894815297116e-24!GO:0065003;macromolecular complex assembly;2.00515935773453e-23!GO:0012505;endomembrane system;4.56966359507741e-23!GO:0005743;mitochondrial inner membrane;5.81045815561408e-23!GO:0006996;organelle organization and biogenesis;1.10409590701911e-22!GO:0006119;oxidative phosphorylation;8.16218478453062e-22!GO:0044445;cytosolic part;1.29384527223654e-21!GO:0051641;cellular localization;1.58343220938311e-21!GO:0051649;establishment of cellular localization;1.76108551231e-21!GO:0022607;cellular component assembly;4.12857484311871e-21!GO:0005654;nucleoplasm;1.44053629844394e-20!GO:0043228;non-membrane-bound organelle;2.10967392388492e-20!GO:0043232;intracellular non-membrane-bound organelle;2.10967392388492e-20!GO:0006457;protein folding;3.60326309095393e-20!GO:0005681;spliceosome;4.07229970806814e-20!GO:0044432;endoplasmic reticulum part;9.58308931834234e-20!GO:0015934;large ribosomal subunit;2.30147896316883e-19!GO:0048770;pigment granule;4.95315539295811e-19!GO:0042470;melanosome;4.95315539295811e-19!GO:0000166;nucleotide binding;5.39376851668449e-19!GO:0044455;mitochondrial membrane part;1.62145745935909e-18!GO:0016462;pyrophosphatase activity;2.55021688081078e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.87269339692688e-18!GO:0005794;Golgi apparatus;3.09393291540556e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;4.28562450288938e-18!GO:0015935;small ribosomal subunit;4.68327563698367e-18!GO:0008134;transcription factor binding;6.60761162817481e-18!GO:0017111;nucleoside-triphosphatase activity;1.35786262736073e-17!GO:0044451;nucleoplasm part;6.45713482253604e-17!GO:0031980;mitochondrial lumen;2.08901660778693e-16!GO:0005759;mitochondrial matrix;2.08901660778693e-16!GO:0051186;cofactor metabolic process;4.61545291241833e-16!GO:0005746;mitochondrial respiratory chain;5.48990312733402e-16!GO:0022618;protein-RNA complex assembly;9.55465782746137e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.17838669631912e-15!GO:0044265;cellular macromolecule catabolic process;2.05912844411129e-15!GO:0006605;protein targeting;3.43852757284909e-15!GO:0006259;DNA metabolic process;4.65901395771577e-15!GO:0048193;Golgi vesicle transport;5.85239807921449e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.60279619987025e-15!GO:0005730;nucleolus;8.63974724782507e-15!GO:0016874;ligase activity;1.11043424082126e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.2648401597564e-14!GO:0043285;biopolymer catabolic process;1.69674749009527e-14!GO:0019941;modification-dependent protein catabolic process;2.55472098434068e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.55472098434068e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.93146932970475e-14!GO:0044257;cellular protein catabolic process;3.09878555390121e-14!GO:0006511;ubiquitin-dependent protein catabolic process;3.40374911023822e-14!GO:0006512;ubiquitin cycle;3.79560035029738e-14!GO:0016192;vesicle-mediated transport;3.83432415146597e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.47873352354394e-14!GO:0050136;NADH dehydrogenase (quinone) activity;4.51514932148666e-14!GO:0003954;NADH dehydrogenase activity;4.51514932148666e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.51514932148666e-14!GO:0044248;cellular catabolic process;6.3521678342417e-14!GO:0051082;unfolded protein binding;7.079468447503e-14!GO:0008135;translation factor activity, nucleic acid binding;7.48160932154494e-14!GO:0009057;macromolecule catabolic process;8.90532089771501e-14!GO:0017076;purine nucleotide binding;1.21306995641191e-13!GO:0032553;ribonucleotide binding;1.35409179748481e-13!GO:0032555;purine ribonucleotide binding;1.35409179748481e-13!GO:0005789;endoplasmic reticulum membrane;1.63506014760481e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.09087792892751e-13!GO:0005793;ER-Golgi intermediate compartment;2.38443125837334e-13!GO:0003676;nucleic acid binding;7.87221475402463e-13!GO:0030163;protein catabolic process;8.70728318633282e-13!GO:0005761;mitochondrial ribosome;1.25619691679897e-12!GO:0000313;organellar ribosome;1.25619691679897e-12!GO:0007049;cell cycle;1.60907149277561e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.09592236899489e-12!GO:0042773;ATP synthesis coupled electron transport;2.09592236899489e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.4161874976705e-12!GO:0045271;respiratory chain complex I;2.4161874976705e-12!GO:0005747;mitochondrial respiratory chain complex I;2.4161874976705e-12!GO:0043412;biopolymer modification;2.48509382608324e-12!GO:0006732;coenzyme metabolic process;2.60443934315002e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.33573622138894e-12!GO:0048523;negative regulation of cellular process;4.33573622138894e-12!GO:0016070;RNA metabolic process;5.73018330557107e-12!GO:0012501;programmed cell death;6.64683961969125e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.30889947269781e-12!GO:0006915;apoptosis;1.4903459444479e-11!GO:0003712;transcription cofactor activity;4.38878548722421e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;4.46925649238016e-11!GO:0000375;RNA splicing, via transesterification reactions;4.46925649238016e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.46925649238016e-11!GO:0009055;electron carrier activity;5.48010503512544e-11!GO:0006464;protein modification process;5.69300190708753e-11!GO:0008219;cell death;7.16311238731936e-11!GO:0016265;death;7.16311238731936e-11!GO:0009259;ribonucleotide metabolic process;1.11358852681611e-10!GO:0006163;purine nucleotide metabolic process;1.36310612772958e-10!GO:0003743;translation initiation factor activity;1.55955266642124e-10!GO:0005635;nuclear envelope;1.79031509365259e-10!GO:0009150;purine ribonucleotide metabolic process;1.87435234398894e-10!GO:0005524;ATP binding;4.38928882460686e-10!GO:0006413;translational initiation;4.90440497387974e-10!GO:0048519;negative regulation of biological process;5.66626189550658e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.82718908678599e-10!GO:0042254;ribosome biogenesis and assembly;5.82718908678599e-10!GO:0032559;adenyl ribonucleotide binding;5.82718908678599e-10!GO:0030554;adenyl nucleotide binding;6.48701240616013e-10!GO:0005768;endosome;9.32105002126709e-10!GO:0006164;purine nucleotide biosynthetic process;1.22998167816381e-09!GO:0031965;nuclear membrane;1.45133692209166e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.52532438596716e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.67321088712275e-09!GO:0006913;nucleocytoplasmic transport;1.71309366776709e-09!GO:0016604;nuclear body;1.71309366776709e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.88423437977769e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.88423437977769e-09!GO:0008565;protein transporter activity;2.06113190255228e-09!GO:0016491;oxidoreductase activity;2.36235299793182e-09!GO:0009260;ribonucleotide biosynthetic process;3.05408587363595e-09!GO:0009141;nucleoside triphosphate metabolic process;3.1668199881798e-09!GO:0006446;regulation of translational initiation;3.36126781173511e-09!GO:0051169;nuclear transport;3.53370613385721e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.0477299912517e-09!GO:0043687;post-translational protein modification;4.06104600213677e-09!GO:0006974;response to DNA damage stimulus;5.29860396174519e-09!GO:0022402;cell cycle process;5.43022579493533e-09!GO:0005788;endoplasmic reticulum lumen;8.03208954563955e-09!GO:0030120;vesicle coat;8.54757770041183e-09!GO:0030662;coated vesicle membrane;8.54757770041183e-09!GO:0015986;ATP synthesis coupled proton transport;9.5348690023748e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.5348690023748e-09!GO:0009056;catabolic process;1.2230991152608e-08!GO:0006366;transcription from RNA polymerase II promoter;1.23867539389913e-08!GO:0046034;ATP metabolic process;1.44791673087891e-08!GO:0044431;Golgi apparatus part;1.64323383669532e-08!GO:0003924;GTPase activity;1.8448446078945e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.87095399582275e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.87095399582275e-08!GO:0044453;nuclear membrane part;1.87969539287845e-08!GO:0000074;regulation of progression through cell cycle;1.98453101049545e-08!GO:0051726;regulation of cell cycle;1.98459168445889e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.31688716525968e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.31688716525968e-08!GO:0009060;aerobic respiration;2.51819050774201e-08!GO:0016887;ATPase activity;2.62573886897047e-08!GO:0019829;cation-transporting ATPase activity;3.60271846783674e-08!GO:0006399;tRNA metabolic process;3.60271846783674e-08!GO:0017038;protein import;3.80021985787771e-08!GO:0045333;cellular respiration;3.96014588965872e-08!GO:0042623;ATPase activity, coupled;5.39976672232189e-08!GO:0006888;ER to Golgi vesicle-mediated transport;5.83338340060717e-08!GO:0005773;vacuole;6.41729644469416e-08!GO:0048475;coated membrane;8.55256528794684e-08!GO:0030117;membrane coat;8.55256528794684e-08!GO:0016607;nuclear speck;9.1007943361006e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.92806834152459e-08!GO:0006461;protein complex assembly;1.20325903858215e-07!GO:0045786;negative regulation of progression through cell cycle;1.45540741992131e-07!GO:0051188;cofactor biosynthetic process;1.60745435494918e-07!GO:0006754;ATP biosynthetic process;1.62602122443436e-07!GO:0006753;nucleoside phosphate metabolic process;1.62602122443436e-07!GO:0008639;small protein conjugating enzyme activity;1.6969803175346e-07!GO:0044440;endosomal part;1.79952632344839e-07!GO:0010008;endosome membrane;1.79952632344839e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.89305787604598e-07!GO:0042981;regulation of apoptosis;1.96010983271768e-07!GO:0031988;membrane-bound vesicle;1.96010983271768e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.20412189850256e-07!GO:0004812;aminoacyl-tRNA ligase activity;2.20412189850256e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.20412189850256e-07!GO:0043067;regulation of programmed cell death;2.2486145796489e-07!GO:0051246;regulation of protein metabolic process;2.44277509675243e-07!GO:0050794;regulation of cellular process;2.62307396445656e-07!GO:0019787;small conjugating protein ligase activity;2.87344048803255e-07!GO:0004842;ubiquitin-protein ligase activity;2.89382073112332e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.09559241385372e-07!GO:0043038;amino acid activation;3.09559241385372e-07!GO:0006418;tRNA aminoacylation for protein translation;3.09559241385372e-07!GO:0043039;tRNA aminoacylation;3.09559241385372e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.38398895198837e-07!GO:0003714;transcription corepressor activity;5.30680925970454e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.49825858205917e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.65333949709416e-07!GO:0051187;cofactor catabolic process;6.05025928258492e-07!GO:0031982;vesicle;6.31117118902673e-07!GO:0009719;response to endogenous stimulus;6.75091895742845e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.66601921547457e-07!GO:0030532;small nuclear ribonucleoprotein complex;8.11013201934006e-07!GO:0016787;hydrolase activity;8.11013201934006e-07!GO:0006099;tricarboxylic acid cycle;8.12930558034686e-07!GO:0046356;acetyl-CoA catabolic process;8.12930558034686e-07!GO:0006281;DNA repair;8.21225850908138e-07!GO:0031410;cytoplasmic vesicle;8.95554490082148e-07!GO:0043069;negative regulation of programmed cell death;9.24815544727914e-07!GO:0000323;lytic vacuole;9.53589849632166e-07!GO:0005764;lysosome;9.53589849632166e-07!GO:0005770;late endosome;9.8716374777467e-07!GO:0004386;helicase activity;1.12334554235819e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.1437285116248e-06!GO:0000139;Golgi membrane;1.17226048821956e-06!GO:0008361;regulation of cell size;1.18044806440673e-06!GO:0043066;negative regulation of apoptosis;1.18044806440673e-06!GO:0016881;acid-amino acid ligase activity;1.62561239267213e-06!GO:0065002;intracellular protein transport across a membrane;1.67881151593067e-06!GO:0016049;cell growth;1.69156419515384e-06!GO:0031252;leading edge;1.71418876299878e-06!GO:0007005;mitochondrion organization and biogenesis;1.8173160217539e-06!GO:0009117;nucleotide metabolic process;1.92329639064897e-06!GO:0016564;transcription repressor activity;1.92574798587497e-06!GO:0009109;coenzyme catabolic process;2.07277602283463e-06!GO:0006084;acetyl-CoA metabolic process;2.09483742471061e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;2.24890997218423e-06!GO:0006364;rRNA processing;2.55075279081503e-06!GO:0001558;regulation of cell growth;2.86939954578579e-06!GO:0006091;generation of precursor metabolites and energy;2.91119124705531e-06!GO:0005643;nuclear pore;2.9632067322146e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.10134834591686e-06!GO:0000278;mitotic cell cycle;3.14966300392837e-06!GO:0005798;Golgi-associated vesicle;3.35406744749874e-06!GO:0008026;ATP-dependent helicase activity;3.4693099982448e-06!GO:0031324;negative regulation of cellular metabolic process;3.52240429915627e-06!GO:0005525;GTP binding;3.56193076220112e-06!GO:0008654;phospholipid biosynthetic process;3.81529135858981e-06!GO:0006752;group transfer coenzyme metabolic process;4.25300968870376e-06!GO:0045259;proton-transporting ATP synthase complex;4.63367084376342e-06!GO:0016072;rRNA metabolic process;4.70006073289434e-06!GO:0004298;threonine endopeptidase activity;5.07786016118272e-06!GO:0009108;coenzyme biosynthetic process;5.46021676797342e-06!GO:0006323;DNA packaging;5.6601157719777e-06!GO:0051170;nuclear import;5.83238299105763e-06!GO:0006793;phosphorus metabolic process;5.98782182224455e-06!GO:0006796;phosphate metabolic process;5.98782182224455e-06!GO:0006916;anti-apoptosis;6.95393646830537e-06!GO:0016853;isomerase activity;7.03268086331029e-06!GO:0043566;structure-specific DNA binding;8.25348460139436e-06!GO:0006606;protein import into nucleus;1.0203802438433e-05!GO:0046930;pore complex;1.11627631338077e-05!GO:0000245;spliceosome assembly;1.16802349914105e-05!GO:0016310;phosphorylation;1.2955620412903e-05!GO:0003697;single-stranded DNA binding;1.30158406946293e-05!GO:0045454;cell redox homeostasis;1.44772115608655e-05!GO:0006613;cotranslational protein targeting to membrane;1.57297313580117e-05!GO:0051789;response to protein stimulus;1.6023721398885e-05!GO:0006986;response to unfolded protein;1.6023721398885e-05!GO:0031968;organelle outer membrane;1.76871887146028e-05!GO:0005769;early endosome;1.8190259370541e-05!GO:0051276;chromosome organization and biogenesis;1.93025964129793e-05!GO:0009892;negative regulation of metabolic process;1.93025964129793e-05!GO:0032561;guanyl ribonucleotide binding;2.07016675238862e-05!GO:0019001;guanyl nucleotide binding;2.07016675238862e-05!GO:0016740;transferase activity;2.07823075788463e-05!GO:0019867;outer membrane;2.3712077658252e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.83014556622298e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.4758893826165e-05!GO:0016568;chromatin modification;3.68871231926729e-05!GO:0032446;protein modification by small protein conjugation;3.74705887707189e-05!GO:0006403;RNA localization;4.00722960803886e-05!GO:0005667;transcription factor complex;4.13688790287524e-05!GO:0050789;regulation of biological process;4.13973665111829e-05!GO:0030133;transport vesicle;4.56860905597044e-05!GO:0005905;coated pit;4.78461833465932e-05!GO:0016567;protein ubiquitination;5.06766619812884e-05!GO:0005762;mitochondrial large ribosomal subunit;5.10791907715745e-05!GO:0000315;organellar large ribosomal subunit;5.10791907715745e-05!GO:0050657;nucleic acid transport;5.24974487706433e-05!GO:0051236;establishment of RNA localization;5.24974487706433e-05!GO:0050658;RNA transport;5.24974487706433e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.51068067890798e-05!GO:0015980;energy derivation by oxidation of organic compounds;6.15504172204814e-05!GO:0000151;ubiquitin ligase complex;6.33047712268612e-05!GO:0003713;transcription coactivator activity;7.5350545562201e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.66377927914361e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.63294986431608e-05!GO:0030867;rough endoplasmic reticulum membrane;9.71978670779565e-05!GO:0016563;transcription activator activity;9.76826307624045e-05!GO:0005791;rough endoplasmic reticulum;0.000100231043536704!GO:0005741;mitochondrial outer membrane;0.00010625635200929!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000110376719502213!GO:0016126;sterol biosynthetic process;0.000119413945666923!GO:0048522;positive regulation of cellular process;0.00012195776723666!GO:0006260;DNA replication;0.000141533664798957!GO:0016859;cis-trans isomerase activity;0.000145812986414628!GO:0030029;actin filament-based process;0.000149898769205271!GO:0005048;signal sequence binding;0.00016400380764857!GO:0007243;protein kinase cascade;0.000167112910840654!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000202210008777146!GO:0051427;hormone receptor binding;0.000226434088281842!GO:0003724;RNA helicase activity;0.000228665051590294!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000245143783346438!GO:0008610;lipid biosynthetic process;0.00025972423590981!GO:0006612;protein targeting to membrane;0.000285088738049568!GO:0019899;enzyme binding;0.000285088738049568!GO:0016779;nucleotidyltransferase activity;0.000298965339231267!GO:0015630;microtubule cytoskeleton;0.000336822768248325!GO:0005813;centrosome;0.000337084808845548!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000340747879864165!GO:0040008;regulation of growth;0.000366431167268452!GO:0043021;ribonucleoprotein binding;0.0003700267372012!GO:0004576;oligosaccharyl transferase activity;0.000382514512564117!GO:0016481;negative regulation of transcription;0.000383905309201703!GO:0044262;cellular carbohydrate metabolic process;0.000386997596672948!GO:0065004;protein-DNA complex assembly;0.000386999347823861!GO:0008250;oligosaccharyl transferase complex;0.000392537902958531!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000395200530707953!GO:0046474;glycerophospholipid biosynthetic process;0.0004144110949421!GO:0005885;Arp2/3 protein complex;0.000430352081771862!GO:0035257;nuclear hormone receptor binding;0.000442270226861811!GO:0030663;COPI coated vesicle membrane;0.000474994515253007!GO:0030126;COPI vesicle coat;0.000474994515253007!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000491705752440363!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000491705752440363!GO:0007050;cell cycle arrest;0.000516951113527175!GO:0016044;membrane organization and biogenesis;0.000546956240037656!GO:0000314;organellar small ribosomal subunit;0.000550934761934161!GO:0005763;mitochondrial small ribosomal subunit;0.000550934761934161!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000582140827140274!GO:0006979;response to oxidative stress;0.000597046713980994!GO:0005694;chromosome;0.000614903439738531!GO:0051252;regulation of RNA metabolic process;0.000628009082332081!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000726546786485044!GO:0015399;primary active transmembrane transporter activity;0.000726546786485044!GO:0005815;microtubule organizing center;0.000754378015315714!GO:0018196;peptidyl-asparagine modification;0.000776307484696524!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000776307484696524!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000779443194468734!GO:0043623;cellular protein complex assembly;0.000779939175252569!GO:0006695;cholesterol biosynthetic process;0.000785815649719652!GO:0051028;mRNA transport;0.000818777741662196!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000850927553064057!GO:0006333;chromatin assembly or disassembly;0.000891953798021411!GO:0051920;peroxiredoxin activity;0.000965396156961553!GO:0030658;transport vesicle membrane;0.00103119208852896!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00105632400109437!GO:0007264;small GTPase mediated signal transduction;0.0010607212488067!GO:0016197;endosome transport;0.0010607212488067!GO:0007010;cytoskeleton organization and biogenesis;0.0010607212488067!GO:0019843;rRNA binding;0.00108910969955742!GO:0048471;perinuclear region of cytoplasm;0.0010911924871443!GO:0019752;carboxylic acid metabolic process;0.00111498009859815!GO:0006082;organic acid metabolic process;0.00115677302451255!GO:0009165;nucleotide biosynthetic process;0.00119072623232811!GO:0046467;membrane lipid biosynthetic process;0.00121870973341821!GO:0006626;protein targeting to mitochondrion;0.00122391007140134!GO:0030137;COPI-coated vesicle;0.00127820670771214!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00131380353121658!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00133963926602438!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00141793492014694!GO:0043681;protein import into mitochondrion;0.00146421310464357!GO:0006891;intra-Golgi vesicle-mediated transport;0.0014805224619089!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00169299517645681!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0017389704867187!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0017389704867187!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0017389704867187!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0018890792995072!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0018890792995072!GO:0046489;phosphoinositide biosynthetic process;0.0018890792995072!GO:0003899;DNA-directed RNA polymerase activity;0.00190993556554406!GO:0065009;regulation of a molecular function;0.00209711907860447!GO:0000087;M phase of mitotic cell cycle;0.00218162078694223!GO:0043488;regulation of mRNA stability;0.0021871504681752!GO:0043487;regulation of RNA stability;0.0021871504681752!GO:0030132;clathrin coat of coated pit;0.00221199871480646!GO:0006414;translational elongation;0.00222168831379413!GO:0003729;mRNA binding;0.00226162015963486!GO:0007067;mitosis;0.00253952437436411!GO:0006650;glycerophospholipid metabolic process;0.00255693414546882!GO:0044427;chromosomal part;0.00259943669521851!GO:0030118;clathrin coat;0.00275983845512249!GO:0033673;negative regulation of kinase activity;0.0028764583688477!GO:0006469;negative regulation of protein kinase activity;0.0028764583688477!GO:0030027;lamellipodium;0.00292730368169068!GO:0000785;chromatin;0.00295014494534225!GO:0048500;signal recognition particle;0.00296060652974708!GO:0004177;aminopeptidase activity;0.00297298762350787!GO:0001726;ruffle;0.00298586406255089!GO:0006950;response to stress;0.00304489458476153!GO:0048518;positive regulation of biological process;0.00304800553338828!GO:0031072;heat shock protein binding;0.0030882568375739!GO:0008186;RNA-dependent ATPase activity;0.00311479424787367!GO:0005774;vacuolar membrane;0.00311692383465536!GO:0030660;Golgi-associated vesicle membrane;0.00332959266317521!GO:0030659;cytoplasmic vesicle membrane;0.00333684751067373!GO:0022403;cell cycle phase;0.00339771141536174!GO:0043284;biopolymer biosynthetic process;0.00341421881330093!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00347199634142253!GO:0007006;mitochondrial membrane organization and biogenesis;0.00351278729977215!GO:0003690;double-stranded DNA binding;0.0035190826576149!GO:0065007;biological regulation;0.00358681251151804!GO:0031902;late endosome membrane;0.00358681251151804!GO:0006839;mitochondrial transport;0.00364796403063081!GO:0030176;integral to endoplasmic reticulum membrane;0.00369741011151389!GO:0031901;early endosome membrane;0.0037978762015361!GO:0006509;membrane protein ectodomain proteolysis;0.00381740003423216!GO:0033619;membrane protein proteolysis;0.00381740003423216!GO:0051348;negative regulation of transferase activity;0.00383705400844796!GO:0051329;interphase of mitotic cell cycle;0.00392947919031285!GO:0008632;apoptotic program;0.00395950515095327!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00402273879282101!GO:0022890;inorganic cation transmembrane transporter activity;0.00404259630035373!GO:0051287;NAD binding;0.00410774788036075!GO:0006818;hydrogen transport;0.00446625398159084!GO:0015992;proton transport;0.00454876382457514!GO:0051301;cell division;0.00462777909753524!GO:0016860;intramolecular oxidoreductase activity;0.00469596446432899!GO:0035258;steroid hormone receptor binding;0.00483976125004554!GO:0030125;clathrin vesicle coat;0.00499647909007134!GO:0030665;clathrin coated vesicle membrane;0.00499647909007134!GO:0030134;ER to Golgi transport vesicle;0.00504995070393366!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00533326207215718!GO:0045792;negative regulation of cell size;0.00561492644460248!GO:0007034;vacuolar transport;0.0056445645716317!GO:0008092;cytoskeletal protein binding;0.00567522617699099!GO:0006740;NADPH regeneration;0.00571938265552282!GO:0006098;pentose-phosphate shunt;0.00571938265552282!GO:0006892;post-Golgi vesicle-mediated transport;0.00571938265552282!GO:0045941;positive regulation of transcription;0.00581007874145338!GO:0030880;RNA polymerase complex;0.00583945869905772!GO:0016363;nuclear matrix;0.00588072197204502!GO:0051168;nuclear export;0.00596649956456927!GO:0043492;ATPase activity, coupled to movement of substances;0.00597660985023125!GO:0005869;dynactin complex;0.00598476113323505!GO:0006402;mRNA catabolic process;0.006056484572948!GO:0046519;sphingoid metabolic process;0.00613706604021477!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00614871743827603!GO:0045047;protein targeting to ER;0.00614871743827603!GO:0017166;vinculin binding;0.00614871743827603!GO:0008047;enzyme activator activity;0.00620516295959762!GO:0008180;signalosome;0.00631050404481176!GO:0003746;translation elongation factor activity;0.0063290959417575!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00653904651828231!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00654055940471887!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00654055940471887!GO:0030127;COPII vesicle coat;0.0066640406870509!GO:0012507;ER to Golgi transport vesicle membrane;0.0066640406870509!GO:0006383;transcription from RNA polymerase III promoter;0.00671896080711013!GO:0030308;negative regulation of cell growth;0.00675885125414104!GO:0045893;positive regulation of transcription, DNA-dependent;0.00680866901757082!GO:0008154;actin polymerization and/or depolymerization;0.0071417963877079!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00725537269795594!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00725537269795594!GO:0006790;sulfur metabolic process;0.00737962982256534!GO:0004004;ATP-dependent RNA helicase activity;0.00743774672640363!GO:0019222;regulation of metabolic process;0.00746909898238476!GO:0008312;7S RNA binding;0.00749423151229811!GO:0000059;protein import into nucleus, docking;0.00757832398380961!GO:0007040;lysosome organization and biogenesis;0.00757832398380961!GO:0009967;positive regulation of signal transduction;0.00766578180489424!GO:0000096;sulfur amino acid metabolic process;0.00775530589066853!GO:0051087;chaperone binding;0.00776178085604104!GO:0008139;nuclear localization sequence binding;0.00797802660105286!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00811846036425834!GO:0044437;vacuolar part;0.00817918349511356!GO:0050662;coenzyme binding;0.00817918349511356!GO:0006693;prostaglandin metabolic process;0.00817918349511356!GO:0006692;prostanoid metabolic process;0.00817918349511356!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00822779833890786!GO:0044433;cytoplasmic vesicle part;0.008649715221606!GO:0051128;regulation of cellular component organization and biogenesis;0.00876153834974055!GO:0000049;tRNA binding;0.00891093737338534!GO:0001872;zymosan binding;0.00894103419452695!GO:0001878;response to yeast;0.00894103419452695!GO:0048468;cell development;0.00921366335250071!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00969752926415996!GO:0005684;U2-dependent spliceosome;0.00971372897729453!GO:0005765;lysosomal membrane;0.010391493865831!GO:0030384;phosphoinositide metabolic process;0.0104087591849491!GO:0048487;beta-tubulin binding;0.0104291028654144!GO:0051270;regulation of cell motility;0.010483910062053!GO:0003711;transcription elongation regulator activity;0.0106793164172895!GO:0045892;negative regulation of transcription, DNA-dependent;0.010773860926616!GO:0016408;C-acyltransferase activity;0.0108505594627518!GO:0006118;electron transport;0.0110615963003675!GO:0051325;interphase;0.0110743662116463!GO:0051059;NF-kappaB binding;0.0111973131640632!GO:0030119;AP-type membrane coat adaptor complex;0.0116512682078684!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0116512682078684!GO:0000428;DNA-directed RNA polymerase complex;0.0116512682078684!GO:0003756;protein disulfide isomerase activity;0.0121948170731591!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0121948170731591!GO:0043433;negative regulation of transcription factor activity;0.0122432438466115!GO:0046483;heterocycle metabolic process;0.0122998598909485!GO:0045045;secretory pathway;0.0123018758507977!GO:0030521;androgen receptor signaling pathway;0.012429511429662!GO:0006672;ceramide metabolic process;0.0125519759143529!GO:0030041;actin filament polymerization;0.0129620277078802!GO:0043022;ribosome binding;0.0131717600403026!GO:0008033;tRNA processing;0.0131979437344017!GO:0000339;RNA cap binding;0.0134594900787964!GO:0051540;metal cluster binding;0.0137159889476379!GO:0051536;iron-sulfur cluster binding;0.0137159889476379!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0137760257120798!GO:0006595;polyamine metabolic process;0.0137838952759137!GO:0006354;RNA elongation;0.0137908755956432!GO:0006289;nucleotide-excision repair;0.013886345098779!GO:0005586;collagen type III;0.0139037648654959!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0139489270014891!GO:0015002;heme-copper terminal oxidase activity;0.0139489270014891!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0139489270014891!GO:0004129;cytochrome-c oxidase activity;0.0139489270014891!GO:0015631;tubulin binding;0.0139751069685443!GO:0031529;ruffle organization and biogenesis;0.0139968045333265!GO:0007041;lysosomal transport;0.0140401035205041!GO:0006778;porphyrin metabolic process;0.0140401035205041!GO:0033013;tetrapyrrole metabolic process;0.0140401035205041!GO:0042802;identical protein binding;0.0143965948580695!GO:0044452;nucleolar part;0.0145818284378147!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0146141484160293!GO:0007033;vacuole organization and biogenesis;0.0147005815406724!GO:0006643;membrane lipid metabolic process;0.0147499824879267!GO:0012506;vesicle membrane;0.0154786132588803!GO:0030145;manganese ion binding;0.0158682854972205!GO:0005581;collagen;0.0161753548937437!GO:0035035;histone acetyltransferase binding;0.0162541470994156!GO:0001527;microfibril;0.0163725607008962!GO:0006007;glucose catabolic process;0.0164266180696881!GO:0006334;nucleosome assembly;0.0166978494374473!GO:0006520;amino acid metabolic process;0.016736188911283!GO:0042158;lipoprotein biosynthetic process;0.0171745731332864!GO:0030032;lamellipodium biogenesis;0.0171745731332864!GO:0030518;steroid hormone receptor signaling pathway;0.0172207974766212!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0173696202575037!GO:0050681;androgen receptor binding;0.0180467497404342!GO:0031497;chromatin assembly;0.0180719242349913!GO:0005832;chaperonin-containing T-complex;0.0188641897759319!GO:0005096;GTPase activator activity;0.0188734394928658!GO:0031625;ubiquitin protein ligase binding;0.0193535014320061!GO:0016272;prefoldin complex;0.019641255748189!GO:0043407;negative regulation of MAP kinase activity;0.0196809290195079!GO:0005862;muscle thin filament tropomyosin;0.0202952775033519!GO:0006749;glutathione metabolic process;0.0204953461681254!GO:0030131;clathrin adaptor complex;0.020505167780687!GO:0006497;protein amino acid lipidation;0.0215203522531047!GO:0006897;endocytosis;0.0223215795005085!GO:0010324;membrane invagination;0.0223215795005085!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0226574955834273!GO:0031124;mRNA 3'-end processing;0.0229307826928685!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0229359940872003!GO:0005606;laminin-1 complex;0.0231713043999921!GO:0006739;NADP metabolic process;0.0232681632493672!GO:0006401;RNA catabolic process;0.0233070521028339!GO:0004674;protein serine/threonine kinase activity;0.0237288586872925!GO:0016125;sterol metabolic process;0.0237791766531144!GO:0043086;negative regulation of catalytic activity;0.0240034946992936!GO:0033559;unsaturated fatty acid metabolic process;0.0240482756270053!GO:0006636;unsaturated fatty acid biosynthetic process;0.0240482756270053!GO:0006506;GPI anchor biosynthetic process;0.0241567466870127!GO:0015036;disulfide oxidoreductase activity;0.0246287332780396!GO:0007021;tubulin folding;0.025731843966748!GO:0043065;positive regulation of apoptosis;0.0258456256400487!GO:0006607;NLS-bearing substrate import into nucleus;0.0258456256400487!GO:0051539;4 iron, 4 sulfur cluster binding;0.0259545262748828!GO:0022408;negative regulation of cell-cell adhesion;0.0260457892325974!GO:0008147;structural constituent of bone;0.0266736517773694!GO:0005637;nuclear inner membrane;0.0269268078675162!GO:0045926;negative regulation of growth;0.0273025784745223!GO:0042168;heme metabolic process;0.0277364318673705!GO:0004287;prolyl oligopeptidase activity;0.0277364318673705!GO:0006261;DNA-dependent DNA replication;0.0278367455998211!GO:0051101;regulation of DNA binding;0.0284192950661053!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0293313978633372!GO:0043068;positive regulation of programmed cell death;0.0296105586504095!GO:0006505;GPI anchor metabolic process;0.0296930351411574!GO:0005100;Rho GTPase activator activity;0.0298600187604579!GO:0033239;negative regulation of amine metabolic process;0.030072595227946!GO:0045763;negative regulation of amino acid metabolic process;0.030072595227946!GO:0001933;negative regulation of protein amino acid phosphorylation;0.030072595227946!GO:0006352;transcription initiation;0.0303270181373438!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0304603700740242!GO:0033043;regulation of organelle organization and biogenesis;0.0304603700740242!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0305477735527675!GO:0008320;protein transmembrane transporter activity;0.0310352679759784!GO:0030508;thiol-disulfide exchange intermediate activity;0.0311714449648755!GO:0001516;prostaglandin biosynthetic process;0.0312315129493182!GO:0046457;prostanoid biosynthetic process;0.0312315129493182!GO:0005520;insulin-like growth factor binding;0.0315580968373618!GO:0006611;protein export from nucleus;0.0324530623015468!GO:0030503;regulation of cell redox homeostasis;0.0324530623015468!GO:0008652;amino acid biosynthetic process;0.0330894131543389!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0332559065034585!GO:0008168;methyltransferase activity;0.0337592157764504!GO:0050811;GABA receptor binding;0.0337965786471224!GO:0008234;cysteine-type peptidase activity;0.0342352150606865!GO:0031543;peptidyl-proline dioxygenase activity;0.0342374421812552!GO:0003678;DNA helicase activity;0.0344548841601868!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0347433651894639!GO:0008629;induction of apoptosis by intracellular signals;0.0348045098081895!GO:0007030;Golgi organization and biogenesis;0.0348431492333409!GO:0050790;regulation of catalytic activity;0.0355096381346196!GO:0000209;protein polyubiquitination;0.0355308501363004!GO:0044420;extracellular matrix part;0.0358054851741153!GO:0005583;fibrillar collagen;0.0360647309498247!GO:0008022;protein C-terminus binding;0.0385494841766794!GO:0000082;G1/S transition of mitotic cell cycle;0.03868802040179!GO:0016741;transferase activity, transferring one-carbon groups;0.0387134347275861!GO:0006807;nitrogen compound metabolic process;0.0392947562676327!GO:0043414;biopolymer methylation;0.0399864288013334!GO:0040011;locomotion;0.0399864288013334!GO:0004860;protein kinase inhibitor activity;0.0399864288013334!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0399864288013334!GO:0004784;superoxide dismutase activity;0.0399864288013334!GO:0048037;cofactor binding;0.0399864288013334!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0399864288013334!GO:0051098;regulation of binding;0.0400302393762957!GO:0004228;gelatinase A activity;0.0401613667098423!GO:0001955;blood vessel maturation;0.0401613667098423!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0409616046606998!GO:0009112;nucleobase metabolic process;0.0417466185454198!GO:0044255;cellular lipid metabolic process;0.0418911418122993!GO:0048144;fibroblast proliferation;0.0424192078208471!GO:0048145;regulation of fibroblast proliferation;0.0424192078208471!GO:0006417;regulation of translation;0.0424192078208471!GO:0000097;sulfur amino acid biosynthetic process;0.0424192078208471!GO:0030522;intracellular receptor-mediated signaling pathway;0.0429926234426904!GO:0030911;TPR domain binding;0.0430580309711308!GO:0051271;negative regulation of cell motility;0.043775771498873!GO:0001953;negative regulation of cell-matrix adhesion;0.0438536412735699!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0438603823775321!GO:0000287;magnesium ion binding;0.0438783010939068!GO:0008538;proteasome activator activity;0.0440889850935928!GO:0019798;procollagen-proline dioxygenase activity;0.0443031599859362!GO:0047485;protein N-terminus binding;0.0451285896179884!GO:0045936;negative regulation of phosphate metabolic process;0.0456433671283087!GO:0006644;phospholipid metabolic process;0.0462757189142453!GO:0051272;positive regulation of cell motility;0.0463107843296863!GO:0040017;positive regulation of locomotion;0.0463107843296863!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0467107979828524!GO:0030433;ER-associated protein catabolic process;0.046749092103161!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.046749092103161!GO:0003684;damaged DNA binding;0.0468965233564919!GO:0031371;ubiquitin conjugating enzyme complex;0.0470347180221595!GO:0040012;regulation of locomotion;0.0472012434547588!GO:0030833;regulation of actin filament polymerization;0.047379320802152!GO:0006779;porphyrin biosynthetic process;0.0475603790221473!GO:0033014;tetrapyrrole biosynthetic process;0.0475603790221473!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0476157685631549!GO:0045334;clathrin-coated endocytic vesicle;0.0485581409965486!GO:0008097;5S rRNA binding;0.048784759734986!GO:0031418;L-ascorbic acid binding;0.049179172455723!GO:0030984;kininogen binding;0.0496304475677233!GO:0004213;cathepsin B activity;0.0496304475677233
|sample_id=11753
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=heart
|top_motifs=ALX4:1.81388521006;XBP1:1.53869708896;TAL1_TCF{3,4,12}:1.52434032796;ESR1:1.38265883139;RXRA_VDR{dimer}:1.35411706469;UFEwm:1.29635504607;EBF1:1.27696240811;HOX{A5,B5}:1.25881465185;bHLH_family:1.24524401531;HOX{A4,D4}:1.2070836302;PAX1,9:1.202695718;MAFB:1.1971819692;RXR{A,B,G}:1.1599115754;EN1,2:1.13992849415;ZNF238:1.10046454776;NKX2-2,8:1.04328046169;HIF1A:1.01135230878;EVI1:1.0112031931;IKZF1:1.00437776042;TBX4,5:0.992594346703;TLX1..3_NFIC{dimer}:0.992062143634;HSF1,2:0.952197324479;TEAD1:0.9463023723;ATF6:0.945069392084;GLI1..3:0.927291820496;HES1:0.899504582017;SRF:0.894218455667;GFI1B:0.893337747898;GZF1:0.828391545072;KLF4:0.806263199377;NFE2L2:0.769464894209;POU3F1..4:0.75000992387;AIRE:0.734340123684;HMX1:0.728613713927;HLF:0.724364528889;STAT2,4,6:0.711170875863;LHX3,4:0.697881219148;NKX3-1:0.687878358995;NFE2L1:0.675515606965;NFATC1..3:0.674962355546;NKX2-1,4:0.657262372751;NKX3-2:0.655539880179;TFCP2:0.640393148973;GTF2I:0.62443459849;PAX4:0.558614326743;MYBL2:0.54884097881;PRDM1:0.544488352794;ZIC1..3:0.527879804367;SPZ1:0.523652417238;HAND1,2:0.514511795353;EGR1..3:0.477568588943;SMAD1..7,9:0.447718937818;GATA4:0.436757662804;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.421044788943;ESRRA:0.419665095621;NR3C1:0.41808407779;GCM1,2:0.415625716083;AHR_ARNT_ARNT2:0.406980147663;FOS_FOS{B,L1}_JUN{B,D}:0.370662632762;TP53:0.363836529575;ZBTB6:0.36213362198;ZNF423:0.360768094193;RFX1:0.3578329865;NFIX:0.347488802541;TFAP4:0.346987442297;PATZ1:0.341392016369;TOPORS:0.338592830424;TFAP2B:0.332443041333;SREBF1,2:0.331959654005;EP300:0.32165296065;RREB1:0.313929129619;PAX5:0.312685276773;NHLH1,2:0.303445216675;GTF2A1,2:0.28979370137;ZNF384:0.271536257517;MAZ:0.267324009631;HIC1:0.265736770338;STAT5{A,B}:0.248482757319;NR6A1:0.242003502904;DBP:0.240895389796;TEF:0.238524460376;FOXM1:0.236717491951;XCPE1{core}:0.227802859206;BACH2:0.208814234374;ZFP161:0.198183180784;FOSL2:0.190987987774;ZNF148:0.183294887695;ZBTB16:0.178319258338;MTE{core}:0.174528108157;MEF2{A,B,C,D}:0.173979753042;AR:0.172806736368;IRF1,2:0.16780941946;FOXL1:0.159970064677;ATF5_CREB3:0.154078985098;CREB1:0.136094788389;CEBPA,B_DDIT3:0.13136433975;NFE2:0.125545391112;TFAP2{A,C}:0.110516279219;MYFfamily:0.106865877087;BPTF:0.0852901939942;MZF1:0.0626870772568;HNF1A:0.0582291110848;PAX8:0.0516983942663;TBP:0.0493072258515;YY1:0.041913489968;PAX6:0.035462358281;SOX17:0.0338263899144;LEF1_TCF7_TCF7L1,2:0.0203025743448;FOXP3:0.0094506369471;VSX1,2:-0.00247048162314;PAX2:-0.0112896208789;NANOG{mouse}:-0.0136303877537;ELK1,4_GABP{A,B1}:-0.0157305903349;JUN:-0.0196518027084;FOX{I1,J2}:-0.0248557214051;FOXO1,3,4:-0.0293183132147;NKX6-1,2:-0.0386670073643;CDC5L:-0.0642089431338;ATF2:-0.0935788952151;ATF4:-0.103445087323;SP1:-0.113828704604;NRF1:-0.122214841229;STAT1,3:-0.125738184961;ONECUT1,2:-0.126700432731;ARID5B:-0.129653815388;TLX2:-0.132327945403;RORA:-0.140468772402;NR1H4:-0.150813442582;RUNX1..3:-0.163595217494;HNF4A_NR2F1,2:-0.192065393328;NFKB1_REL_RELA:-0.201790578265;FOXD3:-0.209796904658;HBP1_HMGB_SSRP1_UBTF:-0.213159162487;LMO2:-0.216903617833;ZNF143:-0.222597530826;HMGA1,2:-0.235737866653;MED-1{core}:-0.251799402915;POU6F1:-0.264184681961;REST:-0.289408820221;POU1F1:-0.296005052059;TFDP1:-0.311722257587;CDX1,2,4:-0.325826328251;MTF1:-0.330729736513;RFX2..5_RFXANK_RFXAP:-0.354939718935;IRF7:-0.372134957663;NFIL3:-0.372949107373;FOX{D1,D2}:-0.373037922962;GFI1:-0.398021505888;MYB:-0.425358426633;PRRX1,2:-0.437583703252;PAX3,7:-0.451179720126;TGIF1:-0.469199526557;ADNP_IRX_SIX_ZHX:-0.49675646408;SPI1:-0.51186217972;CRX:-0.53337541998;SOX2:-0.533725395318;PBX1:-0.554083330855;ETS1,2:-0.555808289969;ELF1,2,4:-0.560034144452;NR5A1,2:-0.575619824978;E2F1..5:-0.587584810929;HOX{A6,A7,B6,B7}:-0.599036395764;FOXA2:-0.605583434315;FOXP1:-0.626022536927;PPARG:-0.628176733864;POU5F1:-0.631095930704;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.646546939246;ALX1:-0.647233531586;BREu{core}:-0.649857056349;GATA6:-0.650018911839;SPIB:-0.698894695567;FOXN1:-0.743143045554;RBPJ:-0.757367203082;NFY{A,B,C}:-0.763184549787;DMAP1_NCOR{1,2}_SMARC:-0.807746175164;FOXQ1:-0.843116801088;MYOD1:-0.862167460844;SOX{8,9,10}:-0.889997072358;SNAI1..3:-0.956909638553;NKX2-3_NKX2-5:-0.971111795875;CUX2:-1.03919452991;ZEB1:-1.04715304658;HOXA9_MEIS1:-1.04843809271;OCT4_SOX2{dimer}:-1.06293605235;T:-1.06591853614;NANOG:-1.07245812535;SOX5:-1.08389969375;PDX1:-1.2035290551;PITX1..3:-1.25077162497;FOX{F1,F2,J1}:-1.3353626437;POU2F1..3:-1.42523708218;IKZF2:-1.45330601371
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11753-123G7;search_select_hide=table117:FF:11753-123G7
}}
}}

Latest revision as of 18:17, 4 June 2020

Name:mesenchymal precursor cell - cardiac, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12369
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueheart
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005181
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12369 CAGE DRX008552 DRR009424
Accession ID Hg19

Library idBAMCTSS
CNhs12369 DRZ000849 DRZ002234
Accession ID Hg38

Library idBAMCTSS
CNhs12369 DRZ012199 DRZ013584
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0342
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.184
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.205
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0833
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0612
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.679
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0913
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0826
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.205
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.46
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.239
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.162
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0612
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.115
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0612
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.239
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.0612
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.12
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial8.968503e-4
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.0612
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.28
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.679
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.115
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.425
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.636
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0552
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal1.032
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12369

Jaspar motifP-value
MA0002.20.162
MA0003.10.436
MA0004.10.589
MA0006.10.661
MA0007.10.773
MA0009.10.231
MA0014.10.589
MA0017.10.347
MA0018.20.0892
MA0019.10.657
MA0024.11.77784e-4
MA0025.10.117
MA0027.10.811
MA0028.10.0395
MA0029.10.104
MA0030.10.0467
MA0031.10.0831
MA0035.20.448
MA0038.10.0199
MA0039.20.00452
MA0040.10.0732
MA0041.10.336
MA0042.10.45
MA0043.10.283
MA0046.10.115
MA0047.20.959
MA0048.10.104
MA0050.10.629
MA0051.10.537
MA0052.10.224
MA0055.10.356
MA0057.10.703
MA0058.10.406
MA0059.10.549
MA0060.17.38729e-9
MA0061.10.237
MA0062.29.59943e-7
MA0065.20.0557
MA0066.10.957
MA0067.10.686
MA0068.10.946
MA0069.10.883
MA0070.10.393
MA0071.10.722
MA0072.10.9
MA0073.10.831
MA0074.10.073
MA0076.10.0141
MA0077.10.0612
MA0078.10.985
MA0079.20.908
MA0080.22.56833e-8
MA0081.10.00424
MA0083.11.36026e-5
MA0084.10.589
MA0087.10.779
MA0088.10.442
MA0090.18.70695e-4
MA0091.10.137
MA0092.10.448
MA0093.10.421
MA0099.20.0256
MA0100.10.335
MA0101.10.0801
MA0102.20.429
MA0103.12.52851e-4
MA0104.20.997
MA0105.10.419
MA0106.10.158
MA0107.10.0975
MA0108.20.0131
MA0111.10.11
MA0112.20.0489
MA0113.10.43
MA0114.10.199
MA0115.10.182
MA0116.10.923
MA0117.10.395
MA0119.10.135
MA0122.10.599
MA0124.10.207
MA0125.10.0326
MA0131.10.819
MA0135.10.356
MA0136.16.8693e-12
MA0137.20.332
MA0138.20.377
MA0139.10.676
MA0140.10.677
MA0141.10.574
MA0142.10.275
MA0143.10.434
MA0144.10.19
MA0145.10.823
MA0146.10.357
MA0147.10.987
MA0148.10.969
MA0149.10.815
MA0150.10.0813
MA0152.10.00727
MA0153.10.382
MA0154.10.664
MA0155.10.534
MA0156.18.07154e-9
MA0157.10.314
MA0159.10.775
MA0160.10.452
MA0162.10.558
MA0163.10.392
MA0164.10.382
MA0258.10.771
MA0259.10.84



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12369

Novel motifP-value
10.664
100.818
1000.519
1010.526
1020.0523
1030.825
1040.913
1050.216
1060.957
1070.618
1080.0739
1090.464
110.868
1100.114
1110.273
1120.44
1130.00123
1140.957
1150.384
1160.0706
1170.652
1180.413
1190.199
120.882
1200.228
1210.822
1220.0283
1234.06629e-4
1240.172
1250.169
1260.356
1270.47
1280.329
1290.596
130.941
1300.528
1310.592
1320.646
1330.891
1340.211
1350.412
1360.869
1370.175
1380.586
1390.553
140.185
1400.837
1410.935
1420.928
1430.857
1440.289
1450.984
1460.726
1470.0735
1480.862
1490.0957
150.739
1500.593
1510.958
1520.349
1530.272
1540.902
1550.0114
1560.162
1570.887
1580.00563
1590.176
160.0185
1600.933
1610.571
1620.776
1630.257
1640.0708
1650.664
1660.0319
1670.322
1680.664
1690.105
170.786
180.112
190.02
20.238
200.687
210.103
220.212
230.13
240.18
250.0661
260.758
270.863
280.129
290.283
30.779
300.49
310.607
321.18215e-13
330.715
340.764
350.928
360.0135
370.176
380.195
390.18
40.0141
400.0317
410.638
420.164
430.984
440.732
450.885
460.803
470.19
480.487
490.147
50.982
500.811
510.875
520.673
530.0704
540.745
550.106
560.66
570.596
580.133
590.638
60.686
600.698
610.667
620.217
630.759
640.485
650.973
660.123
670.5
680.264
690.672
70.0923
700.928
710.651
720.372
730.164
740.0591
750.701
760.396
770.157
780.0188
790.0237
80.426
800.325
810.604
820.892
830.721
840.978
850.0648
860.256
870.414
880.533
890.117
90.564
900.603
910.865
920.211
930.608
940.886
950.616
960.484
970.302
980.106
990.292



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12369


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000034 (stem cell)
0000569 (cardiac mesenchymal cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000271 (human cardiac mesenchymal precursor cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000011 (migratory trunk neural crest cell)
CL:0000221 (ectodermal cell)

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