FF:11760-123H5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005216 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008557;DRR009429;DRZ000854;DRZ002239;DRZ012204;DRZ013589 | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002119,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000273 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!1.76!56.05!PAX8;;chr8:55370487..55370503,+!p1@SOX17!1.49!29.66!SOX17;;chr20:50179368..50179392,-!p2@NFATC2!1.33!26.08!NFATC2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.32!19.72!ZBED1;;chr11:61520075..61520136,+!p1@C11orf9!1.31!40.99!C11orf9;;chr21:36260773..36260804,-!p7@RUNX1!1.30!25.62!RUNX1;;chr15:83953397..83953425,-!p1@BNC1!1.27!20.03!BNC1;;chr11:46299199..46299233,+!p1@CREB3L1!1.20!76.70!CREB3L1;;chr12:26277817..26277863,-!p2@BHLHE41!1.19!19.56!BHLHE41;;chr8:11561684..11561751,+!p1@GATA4!1.16!13.35!GATA4;;chr19:42636586..42636607,-!p1@POU2F2!1.13!34.47!POU2F2;;chr1:170632285..170632309,+!p1@PRRX1!1.13!14.28!PRRX1;;chr8:106330656..106330684,+!p1@ZFPM2!1.11!31.21!ZFPM2;;chr17:1959369..1959388,+!p2@HIC1!1.04!26.86!HIC1;;chr8:72756267..72756296,-!p4@MSC!1.04!14.59!MSC;;chr10:64576105..64576133,-!p1@EGR2!1.03!20.18!EGR2;;chr6:134210243..134210257,+!p1@TCF21!1.03!9.78!TCF21;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.01!9.32!HOXC5;;chr2:102091566..102091581,-!p1@RFX8!1.01!9.16!RFX8;;chr19:45971246..45971265,+!p1@FOSB!1.00!169.86!FOSB;;chr12:66218598..66218645,+!p2@HMGA2!1.00!42.08!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!0.96!26.08!GATA6;;chr11:32457075..32457095,-!p1@WT1!0.96!8.07!WT1;;chr1:170632115..170632136,+!p9@PRRX1!0.95!7.92!PRRX1;;chr12:66218255..66218304,+!p3@HMGA2!0.94!21.58!HMGA2;;chr1:170632137..170632172,+!p10@PRRX1!0.94!7.76!PRRX1;;chr11:120107344..120107351,+!p1@POU2F3!0.92!8.85!POU2F3;;chr17:1958388..1958404,+!p1@HIC1!0.91!47.67!HIC1;;chr3:141087393..141087426,+!p3@ZBTB38!0.91!29.81!ZBTB38;;chr1:170633348..170633399,+!p2@PRRX1!0.90!9.63!PRRX1;;chr8:72756637..72756664,-!p3@MSC!0.90!7.92!MSC;;chr9:16705069..16705086,-!p3@BNC2!0.90!6.99!BNC2;;chr12:26277956..26277980,-!p1@BHLHE41!0.89!25.31!BHLHE41;;chr3:141087454..141087465,+!p19@ZBTB38!0.88!6.52!ZBTB38;;chr2:239756739..239756755,+!p2@TWIST2!0.87!11.18!TWIST2;;chr1:170633262..170633285,+!p3@PRRX1!0.86!7.14!PRRX1;;chr3:25470156..25470227,+!p2@RARB!0.86!6.21!RARB;;chr2:19558373..19558392,-!p1@OSR1!0.85!17.70!OSR1;;chr12:66218183..66218209,+!p4@HMGA2!0.85!12.11!HMGA2;;chr11:46299539..46299620,+!p2@CREB3L1!0.85!10.56!CREB3L1;;chr17:46622114..46622138,-!p4@HOXB2!0.85!9.63!HOXB2;;chr7:1577899..1577943,+!p3@MAFK!0.85!6.06!MAFK;;chr12:66218212..66218244,+!p5@HMGA2!0.84!8.85!HMGA2;;chr12:26277929..26277955,-!p3@BHLHE41!0.84!8.54!BHLHE41;;chr19:46801639..46801699,+!p1@HIF3A!0.83!5.74!HIF3A;;chr1:151032860..151032918,+!p1@MLLT11!0.82!71.89!MLLT11;;chr8:72756667..72756736,-!p2@MSC!0.81!8.85!MSC;;chr7:26191809..26191890,+!p1@NFE2L3!0.80!28.26!NFE2L3;;chr8:72756063..72756125,-!p1@MSC!0.80!11.33!MSC;;chr7:27183263..27183284,-!p2@HOXA5!0.80!5.28!HOXA5;;chr9:127269661..127269719,-!p1@NR5A1!0.80!5.28!NR5A1;;chr3:138665937..138665968,-!p1@FOXL2!0.79!5.12!FOXL2;;chr17:46132044..46132080,+!p4@NFE2L1!0.79!5.12!NFE2L1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.78!67.38!ZC3H12A;;chr17:46622070..46622109,-!p1@HOXB2!0.78!11.96!HOXB2;;chr8:106330696..106330719,+!p2@ZFPM2!0.78!6.52!ZFPM2;;chr12:54394309..54394336,+!p2@HOXC9!0.78!4.97!HOXC9;;chr17:45928521..45928539,-!p1@SP6!0.78!4.97!SP6;;chr15:96869114..96869160,+!p11@NR2F2!0.77!6.83!NR2F2;;chr7:44143925..44143970,+!p1@AEBP1!0.76!116.29!AEBP1;;chr8:49833948..49833973,-!p2@SNAI2!0.76!32.92!SNAI2;;chr18:19749386..19749404,+!p2@GATA6!0.76!6.99!GATA6;;chr2:239756671..239756732,+!p1@TWIST2!0.75!15.99!TWIST2;;chr1:170632051..170632081,+!p16@PRRX1!0.74!4.50!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.74!4.50!PRRX1;;chr3:25469815..25469866,+!p3@RARB!0.73!4.35!RARB;;chr17:45928443..45928473,-!p2@SP6!0.73!4.35!SP6;;chr8:49833978..49833996,-!p1@SNAI2!0.72!98.75!SNAI2;;chr12:115121962..115121987,-!p1@TBX3!0.72!39.90!TBX3;;chr2:66662281..66662308,+!p1@MEIS1!0.72!16.30!MEIS1;;chr16:86544113..86544145,+!p1@FOXF1!0.72!5.43!FOXF1;;chr7:27183291..27183324,-!p1@HOXA5!0.72!4.19!HOXA5;;chr8:72756213..72756243,-!p5@MSC!0.71!5.59!MSC;;chr2:121493425..121493474,+!p1@GLI2!0.70!9.63!GLI2;;chr6:45296048..45296082,+!p1@RUNX2!0.70!4.66!RUNX2;;chr1:170632250..170632277,+!p7@PRRX1!0.70!4.04!PRRX1;;chr12:54402745..54402788,+!p1@HOXC8!0.70!4.04!HOXC8;;chr12:54447637..54447659,+!p4@HOXC4!0.70!4.04!HOXC4;;chr10:94449703..94449718,+!p1@HHEX!0.69!17.08!HHEX;;chr1:151032922..151032951,+!p2@MLLT11!0.69!6.99!MLLT11;;chr1:170632959..170632987,+!p4@PRRX1!0.69!4.35!PRRX1;;chr11:125034640..125034655,+!p1@PKNOX2!0.69!3.88!PKNOX2;;chr1:59249688..59249703,-!p3@JUN!0.68!25.62!JUN;;chr15:96874927..96874938,+!p8@NR2F2!0.68!8.85!NR2F2;;chr3:141121847..141121868,+!p5@ZBTB38!0.68!6.06!ZBTB38;;chr17:46622205..46622218,-!p3@HOXB2!0.68!4.50!HOXB2;;chr4:174450089..174450153,-!p2@HAND2!0.67!3.73!HAND2;;chr4:174451370..174451387,-!p1@HAND2!0.67!3.73!HAND2;;chr11:65686732..65686756,+!p2@DRAP1!0.66!17.39!DRAP1;;chr1:151032782..151032801,+!p4@MLLT11!0.66!7.92!MLLT11;;chr2:102091144..102091183,-!p2@RFX8!0.66!3.57!RFX8;;chr2:176994408..176994492,+!p1@HOXD8!0.66!3.57!HOXD8;;chr12:66218836..66218888,+!p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| |||
|ffid_belonging_in_development=CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 34: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor3.CNhs12376.11760-123H5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor3.CNhs12376.11760-123H5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor3.CNhs12376.11760-123H5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor3.CNhs12376.11760-123H5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520left%2520ovary%252c%2520donor3.CNhs12376.11760-123H5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11760-123H5 | |id=FF:11760-123H5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000273 | ||
|is_obsolete= | |||
|library_id=CNhs12376 | |||
|library_id_phase_based=2:CNhs12376 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11760 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11760 | |||
|name=mesenchymal precursor cell - ovarian cancer left ovary, donor3 | |name=mesenchymal precursor cell - ovarian cancer left ovary, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 41: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12376,LSID914,release011,COMPLETED | |profile_hcage=CNhs12376,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0494788700425921,0,-0.0675652320645358,0.0910506567948208,0,0,0,0,0,0,0,0,0,0,0,0.0626808480570541,0,-0.0906421622913735,0,0,0.0045332015409027,0,0,0.281776556349085,0,0,0.116563340698528,0,0,0,0,0,0,0,0,0,0,0.117445612912116,0,0.0283968031216583,0.117445612912116,0,0,0,0,0,0,0,0.0071254029156927,0,0,0,0.0626808480570541,0,0.0182322170312172,0,0.0204532516695112,0,0,0.112453272915881,0,0,0,0,0,0,0.0626808480570541,0,0,0,0.117445612912116,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0903707411324857,0.031340424028527,0,0,-0.0584468268118252,0.133082532423556,0,0.285912192118288,0.090063230484585,0,-0.0353545031806523,0.077838510954506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.065033169893934,0.117445612912116,0,0,0,-0.0782452003104184,0,0,0.0626808480570541,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0353545031806523,0.0626808480570541,0,0,0.0626808480570541,0,0,0.0626808480570541,0,0.285912192118288,0,0,0.00234105519182598,0,0.122510456944352,-0.0260695296113556,0.058722806456058,0,0.119044516125681,0,0,0,0,0,0,0,0,0,0.0816770331764135,0,0.0670330613228014,0,0.0626808480570541,0.056854766580222,0,0,-0.095675330769429,0,-0.0313019650903656,-0.00566341302031409,0,0,0,0,0.219335064851765,0,-0.120879483793741,-0.0827201683234173,-0.012588722698738,0.150374282429784,-0.04680465889238,0,0,0,0.193097859124855,-0.329819043154038,0,0,0.037964797179033,-0.0669734845924575,0,0,0.770559290788256,0,0.236347873198216,0.0993049070340365,0,-0.0193158223967629,0,0,0,0,0,0,0,0,0,0,0,0.217545051390023,-0.16091717679962,0,0,0,0,0.0392117249487745,0.0626808480570541,0.0615965299637544,-0.310605307899513,0.0162802156334274,-0.0084469223954323,0.0957946533018882,0,0.199173599067399,-0.0723245511819384,-0.10747682927271,-0.00179516841716687,0.332377595916639,0.21700607609469,0,0.0903707411324857,0.116101977801828,-0.0451767638042311,-0.059577367657925,-0.00282659546444308,0.318432800705358,-0.0916230157038755,0,0,0.0626808480570541,-0.13568096540602,0,-0.193910778947368,0.106481961219586,0.070641282780872,0.0254514028093508,-0.262286395124645,-0.0444772359917418,0.0157569249697782,0.148401631547493,-0.0504486572520572,0,0.658200696843963,0.0566907112717006,0,0.000521748667058342,0.023048085940737,0.252979324293151,-0.114262847101367,0,-0.317906041931631,-0.00566341302031409,0.031340424028527,0.101080138915437,-0.0770267246438205,0.209796900128978,0.0315602946876894,-0.0177390551635225,0,0,0,0,0.0626808480570541,0.0191720445831027,-0.373420723150817,-0.170174713498491,0,-0.0355743514155601,0.0626808480570541,0.0174453305631182,0,-0.0912902729990459,0.0626808480570541,0.0626808480570541,-0.125553300163863,0,0.0366304074721732,0.18849047452607,0.10262178691771,0.266165064847113,-0.0584468268118252,-0.297840510264929,-0.063372726819941,-0.160123038790073,0.0499087451574601,0,0.720367959477234,0,0.268662579208861,-0.0049758392185697,-0.0465619099081593,-0.005807622224235,0,0.100044672186666,0,-0.0261048535389251,0.0284874747668599,-0.104107145133073,0.00167023611360406,-0.32184376166857,0.0234928809659771,0,-0.00574106814436948,0.943817589195441,0.0626808480570541,0.153455428642983,0.0059696785654932,0.0626808480570541,-0.032921470422523,-0.0526880415821979,-0.0698919114688564,0.119374096586722,0,0.31182911918621,0,0.0626808480570541,0.0463339320639054,-0.0694046178850394,0,-0.188228762511859,-0.0126062385170362,-0.124436595907517,0.00147453947718226,0,0,-0.0491036622963648,0,0,-0.0836215282962479,0.0626808480570541,0.0955597106924901,0.360014234937074,0,-0.108622809454255,0,0,-0.114846917908122,0,0.0811766649471105,0,0,0.14176225848282,0.202861184871681,0,0,0.542103987586844,0.0082282072645045,0.0626808480570541,0.00372433707169799,0,0,0,0,0,-0.347517719761625,0.0777980932943542,0,-0.0721063581355761,0,0,0,0.62946282183141,0,0.0021708124421797,0,0.24951993047739,0.646183495497828,0.01979279846688,-0.00557180276430395,0.031340424028527,0,0,0,0.164011050063668,0.0462833683826667,0.117445612912116,-0.131862706497632,0,0,0,0,-0.0234601417321572,0,0.166071419879349,0.175327843326242,0,0.00495039100339012,-0.076703955337286,0,0,0,0.155677021909012,0,0,0,0.0274085440314456,0.0171052255395883,0,0,0.112187444336553,0,-0.085765604101159,-0.0189010314897873,0,0.0773700607703688,0.231663736838148,0.507213251610786,0,0,-0.0118272013124971,0,0.031340424028527,0.130282665568916,-0.0196893749086122,0,0,0,0,0,0,0,0.117445612912116,0.218316911111047,0,0,0,0,0,0,0.166071419879349,0,0,0,0,0.0266524061468458,0.15729587381888,0.117445612912116,0,0,0,0,0,0,0.444041908863249,-0.0414594907257556,0,0,0,0,0,0,0,0,-0.151936641801428,0,0,0,0,0,0.0204532516695112,0,0.0626808480570541,0,0,0.0646557006775256,0,0,-0.0675652320645358,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.00587347312333142,-0.117907269886474,0,0,0,0,0,0,0,0.0446559996557234,0,0.117445612912116,0,0,0.095912526420001,0,0,0,-0.0421155367321023,0,0.0494788700425921,0,0,0,0.031340424028527,0,0,0.031340424028527,0,0,0,0,0,0,0,0,0,0,0.142956096059144,0,0,0,0.226089844098563,0.0447491015038818,0.111591908953904,-0.0199394308459628,0,0,0.20098105532027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.031340424028527,0,0,0,0,0,0,0,0,0,0.117445612912116,0,0,0,0,0,0,-0.0517727113763695,0,0,0,0,0.24951993047739,0,0,0.281776556349085,0.117445612912116,0,-0.060692385771999,0,0,0,0,0.0716836013436723,0,0.250842833563884,0.408007506238707,0.00558453967707305,0,0,0,0.196396090556201,0.0626808480570541,0,0.0296082320774929,0,0.283878299233583,0,0,0,0,0,0,0,0,0.0626808480570541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0906421622913735,0,0,0,0,0,0,0,0,0,0,0,0,0.142956096059144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166071419879349,0,0,0,0,0,0,0.0626808480570541,0.0286694847816376,0.117445612912116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239470829593176,0,0,0,0.515053420209375,0,0,0,0,0,0,0.117445612912116,0,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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 56: | Line 78: | ||
|rna_weight_ug=31.58265 | |rna_weight_ug=31.58265 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 68: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.331056133794e-224!GO:0005737;cytoplasm;3.10241371528091e-197!GO:0043226;organelle;4.28988227121289e-173!GO:0043229;intracellular organelle;1.21229082621565e-172!GO:0043231;intracellular membrane-bound organelle;1.51304171025055e-169!GO:0043227;membrane-bound organelle;2.85678546785092e-169!GO:0044444;cytoplasmic part;3.82861243015052e-139!GO:0044422;organelle part;1.85754176205128e-133!GO:0044446;intracellular organelle part;7.55749509271048e-132!GO:0032991;macromolecular complex;7.45071576983701e-90!GO:0005515;protein binding;1.10517329444142e-86!GO:0044238;primary metabolic process;9.04840741726468e-79!GO:0044237;cellular metabolic process;1.63207043081952e-77!GO:0030529;ribonucleoprotein complex;3.45825010106114e-77!GO:0043170;macromolecule metabolic process;2.86490939636076e-72!GO:0043233;organelle lumen;8.86295536718475e-64!GO:0031974;membrane-enclosed lumen;8.86295536718475e-64!GO:0044428;nuclear part;3.58099585593638e-61!GO:0003723;RNA binding;3.49815494439109e-59!GO:0005739;mitochondrion;1.48073430163629e-57!GO:0005634;nucleus;1.48073430163629e-57!GO:0031090;organelle membrane;6.08383875067938e-53!GO:0019538;protein metabolic process;8.42930328020123e-53!GO:0016043;cellular component organization and biogenesis;5.80024888673769e-49!GO:0044260;cellular macromolecule metabolic process;5.52335175947651e-47!GO:0005840;ribosome;5.57558623635093e-47!GO:0044267;cellular protein metabolic process;1.27422334311271e-46!GO:0043234;protein complex;1.44056373983544e-45!GO:0006412;translation;6.82316869250271e-45!GO:0015031;protein transport;3.12532254107947e-44!GO:0033036;macromolecule localization;5.21543560265428e-44!GO:0003735;structural constituent of ribosome;1.08518802947715e-41!GO:0045184;establishment of protein localization;3.86766140700537e-41!GO:0008104;protein localization;4.33289042538617e-41!GO:0005829;cytosol;7.21393030269831e-41!GO:0006396;RNA processing;1.18333461015725e-40!GO:0044429;mitochondrial part;2.05122949098723e-39!GO:0009058;biosynthetic process;2.24306929582405e-39!GO:0031967;organelle envelope;1.3122671464569e-37!GO:0031975;envelope;3.24499432176187e-37!GO:0031981;nuclear lumen;6.65360466139207e-37!GO:0033279;ribosomal subunit;9.49948479088558e-37!GO:0043283;biopolymer metabolic process;1.47344270638605e-36!GO:0009059;macromolecule biosynthetic process;2.45698191458715e-36!GO:0046907;intracellular transport;2.92575042183257e-35!GO:0044249;cellular biosynthetic process;4.02288673299965e-35!GO:0016071;mRNA metabolic process;1.41485519921745e-32!GO:0008380;RNA splicing;2.76656824935167e-32!GO:0010467;gene expression;1.10002583087265e-30!GO:0006996;organelle organization and biogenesis;2.70028257626673e-30!GO:0043228;non-membrane-bound organelle;1.34010772804535e-29!GO:0043232;intracellular non-membrane-bound organelle;1.34010772804535e-29!GO:0006886;intracellular protein transport;1.07585986061716e-28!GO:0006397;mRNA processing;1.17183581391609e-28!GO:0065003;macromolecular complex assembly;1.55455625614341e-28!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.06530573497255e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.25390109198316e-27!GO:0005740;mitochondrial envelope;1.22420586080245e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.62145721852655e-25!GO:0022607;cellular component assembly;2.66774759304072e-25!GO:0005783;endoplasmic reticulum;2.722954619191e-25!GO:0031966;mitochondrial membrane;3.33718956632758e-25!GO:0019866;organelle inner membrane;1.69408908796991e-24!GO:0012505;endomembrane system;7.417044413355e-24!GO:0044445;cytosolic part;7.14356644877987e-23!GO:0051641;cellular localization;7.29795173517008e-23!GO:0051649;establishment of cellular localization;7.33851183991367e-23!GO:0005743;mitochondrial inner membrane;8.50304249670744e-23!GO:0005654;nucleoplasm;1.58612637686963e-22!GO:0005681;spliceosome;2.46545759595763e-22!GO:0006119;oxidative phosphorylation;2.97877334723706e-22!GO:0006259;DNA metabolic process;2.96062317738629e-21!GO:0006457;protein folding;2.96926417468562e-21!GO:0044455;mitochondrial membrane part;3.47202664781637e-20!GO:0016462;pyrophosphatase activity;7.18158748320364e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.57212757993179e-20!GO:0005794;Golgi apparatus;1.04584156256331e-19!GO:0000166;nucleotide binding;1.57355545055579e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;1.63001529127855e-19!GO:0015934;large ribosomal subunit;1.88270594156699e-19!GO:0048770;pigment granule;2.63037399710549e-19!GO:0042470;melanosome;2.63037399710549e-19!GO:0017111;nucleoside-triphosphatase activity;5.28124133245747e-19!GO:0007049;cell cycle;7.24660684862731e-19!GO:0015935;small ribosomal subunit;2.95414722238656e-18!GO:0044432;endoplasmic reticulum part;3.63380223340402e-18!GO:0044451;nucleoplasm part;8.31280223446988e-18!GO:0043285;biopolymer catabolic process;2.93959168247894e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;6.96165312426311e-17!GO:0000502;proteasome complex (sensu Eukaryota);6.98894174788644e-17!GO:0030163;protein catabolic process;1.03621631436203e-16!GO:0008134;transcription factor binding;1.0741620868272e-16!GO:0005746;mitochondrial respiratory chain;1.13812483139942e-16!GO:0019941;modification-dependent protein catabolic process;1.23974461270549e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.23974461270549e-16!GO:0044257;cellular protein catabolic process;1.73780493447423e-16!GO:0006511;ubiquitin-dependent protein catabolic process;2.04228732196769e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.48713112289793e-16!GO:0048193;Golgi vesicle transport;2.7601665184463e-16!GO:0044265;cellular macromolecule catabolic process;3.99107142495564e-16!GO:0009057;macromolecule catabolic process;4.74441596755822e-16!GO:0022618;protein-RNA complex assembly;8.4353833854616e-16!GO:0031980;mitochondrial lumen;1.61410211354511e-15!GO:0005759;mitochondrial matrix;1.61410211354511e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.42417479944228e-15!GO:0003954;NADH dehydrogenase activity;2.42417479944228e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.42417479944228e-15!GO:0006512;ubiquitin cycle;4.61995998393723e-15!GO:0016874;ligase activity;5.40422002390398e-15!GO:0005730;nucleolus;1.15537440535385e-14!GO:0006605;protein targeting;1.94972891036178e-14!GO:0022402;cell cycle process;2.15784832531421e-14!GO:0032553;ribonucleotide binding;2.38101661344101e-14!GO:0032555;purine ribonucleotide binding;2.38101661344101e-14!GO:0051082;unfolded protein binding;3.56522230798097e-14!GO:0003676;nucleic acid binding;4.57804521468983e-14!GO:0017076;purine nucleotide binding;5.27871222433342e-14!GO:0051186;cofactor metabolic process;5.49020177776625e-14!GO:0016192;vesicle-mediated transport;6.1244600366577e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.35872792824014e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.5616207871552e-13!GO:0008135;translation factor activity, nucleic acid binding;1.57038616256924e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.97437220307515e-13!GO:0044248;cellular catabolic process;1.97493798466051e-13!GO:0005793;ER-Golgi intermediate compartment;2.00816473683724e-13!GO:0012501;programmed cell death;2.08343943525985e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.18571256507157e-13!GO:0045271;respiratory chain complex I;2.18571256507157e-13!GO:0005747;mitochondrial respiratory chain complex I;2.18571256507157e-13!GO:0005761;mitochondrial ribosome;2.25999492310655e-13!GO:0000313;organellar ribosome;2.25999492310655e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.50083422499875e-13!GO:0042773;ATP synthesis coupled electron transport;2.50083422499875e-13!GO:0043412;biopolymer modification;3.96649656297896e-13!GO:0006915;apoptosis;5.48810813286929e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.89920958820887e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.25954629093312e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;2.65587063547993e-12!GO:0000375;RNA splicing, via transesterification reactions;2.65587063547993e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.65587063547993e-12!GO:0000278;mitotic cell cycle;2.65587063547993e-12!GO:0009055;electron carrier activity;3.15333939723964e-12!GO:0048523;negative regulation of cellular process;3.71669166116707e-12!GO:0005789;endoplasmic reticulum membrane;4.63120424277903e-12!GO:0006464;protein modification process;4.74902298134161e-12!GO:0008219;cell death;5.67133504134068e-12!GO:0016265;death;5.67133504134068e-12!GO:0005635;nuclear envelope;1.06369556209788e-11!GO:0006732;coenzyme metabolic process;3.59546420779248e-11!GO:0006974;response to DNA damage stimulus;3.67593528845985e-11!GO:0016070;RNA metabolic process;4.00203660456806e-11!GO:0031965;nuclear membrane;5.59240055367867e-11!GO:0003712;transcription cofactor activity;6.15710818242047e-11!GO:0003743;translation initiation factor activity;1.15303335826188e-10!GO:0005524;ATP binding;1.15825400865819e-10!GO:0042254;ribosome biogenesis and assembly;1.25323647918946e-10!GO:0048519;negative regulation of biological process;1.47077118121751e-10!GO:0032559;adenyl ribonucleotide binding;2.83600247155432e-10!GO:0000074;regulation of progression through cell cycle;3.38407487295074e-10!GO:0009259;ribonucleotide metabolic process;4.93723375077247e-10!GO:0051726;regulation of cell cycle;5.11203579762818e-10!GO:0005694;chromosome;6.3858621535885e-10!GO:0006163;purine nucleotide metabolic process;6.41499436594394e-10!GO:0030554;adenyl nucleotide binding;7.27321435117448e-10!GO:0043687;post-translational protein modification;8.60548238046707e-10!GO:0016604;nuclear body;9.24436665620892e-10!GO:0006413;translational initiation;9.6693162841046e-10!GO:0044453;nuclear membrane part;1.15606037610059e-09!GO:0009150;purine ribonucleotide metabolic process;1.37284592595709e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.5743893918238e-09!GO:0006888;ER to Golgi vesicle-mediated transport;1.96395980243019e-09!GO:0003924;GTPase activity;1.9912456253874e-09!GO:0051276;chromosome organization and biogenesis;2.14630150383076e-09!GO:0006913;nucleocytoplasmic transport;2.25191813226106e-09!GO:0006164;purine nucleotide biosynthetic process;2.61535666862546e-09!GO:0044427;chromosomal part;2.84985155301144e-09!GO:0051169;nuclear transport;4.48613747860896e-09!GO:0006281;DNA repair;4.88681259548888e-09!GO:0009152;purine ribonucleotide biosynthetic process;5.41123596546445e-09!GO:0005788;endoplasmic reticulum lumen;5.41123596546445e-09!GO:0006446;regulation of translational initiation;5.77948749454793e-09!GO:0043069;negative regulation of programmed cell death;6.33614302646253e-09!GO:0008639;small protein conjugating enzyme activity;6.93467284949446e-09!GO:0005768;endosome;7.01560571271102e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.02083895852682e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.36154828779128e-09!GO:0043067;regulation of programmed cell death;7.36680416118849e-09!GO:0044431;Golgi apparatus part;7.65498572972024e-09!GO:0009260;ribonucleotide biosynthetic process;7.72331758478327e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;9.06812023930794e-09!GO:0008565;protein transporter activity;9.90561431025797e-09!GO:0016887;ATPase activity;1.01625684735568e-08!GO:0009056;catabolic process;1.15612715087062e-08!GO:0042981;regulation of apoptosis;1.18587778023394e-08!GO:0004842;ubiquitin-protein ligase activity;1.20527832600785e-08!GO:0009141;nucleoside triphosphate metabolic process;1.3333278496779e-08!GO:0019787;small conjugating protein ligase activity;1.34900373772755e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.41757226161637e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.46917817253177e-08!GO:0042623;ATPase activity, coupled;1.80635995998263e-08!GO:0050794;regulation of cellular process;1.83014124300854e-08!GO:0043066;negative regulation of apoptosis;1.83014124300854e-08!GO:0051301;cell division;1.9752373018397e-08!GO:0000087;M phase of mitotic cell cycle;2.28268471033858e-08!GO:0030120;vesicle coat;2.43400652769296e-08!GO:0030662;coated vesicle membrane;2.43400652769296e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.43400652769296e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.43400652769296e-08!GO:0006323;DNA packaging;2.64145615239211e-08!GO:0006461;protein complex assembly;2.83191340381895e-08!GO:0015986;ATP synthesis coupled proton transport;2.83191340381895e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.83191340381895e-08!GO:0006366;transcription from RNA polymerase II promoter;2.96721462980253e-08!GO:0007067;mitosis;3.04720784950274e-08!GO:0006916;anti-apoptosis;3.60453339582873e-08!GO:0009060;aerobic respiration;3.65475584077887e-08!GO:0051246;regulation of protein metabolic process;4.11643876702787e-08!GO:0009142;nucleoside triphosphate biosynthetic process;4.83927411589936e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.83927411589936e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.25791133401948e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.28931081903933e-08!GO:0022403;cell cycle phase;5.79285634090967e-08!GO:0006260;DNA replication;6.25309466164969e-08!GO:0006399;tRNA metabolic process;6.42790069560737e-08!GO:0016607;nuclear speck;7.66297737616725e-08!GO:0009719;response to endogenous stimulus;7.75334894237336e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.09417551895225e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.09417551895225e-08!GO:0016881;acid-amino acid ligase activity;8.10363113988173e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.14290747752831e-08!GO:0017038;protein import;9.30903448752981e-08!GO:0004386;helicase activity;1.07700847041952e-07!GO:0019829;cation-transporting ATPase activity;1.18366855105099e-07!GO:0065004;protein-DNA complex assembly;1.34656468250763e-07!GO:0045333;cellular respiration;1.53192619743286e-07!GO:0046034;ATP metabolic process;1.58852267205282e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.84524136481909e-07!GO:0031988;membrane-bound vesicle;2.66822054162527e-07!GO:0005643;nuclear pore;2.70036762597464e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.95252186609855e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.15738340479882e-07!GO:0004812;aminoacyl-tRNA ligase activity;3.15738340479882e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.15738340479882e-07!GO:0031252;leading edge;3.39568143136554e-07!GO:0000785;chromatin;3.39607455603082e-07!GO:0051188;cofactor biosynthetic process;3.62336725522465e-07!GO:0006333;chromatin assembly or disassembly;3.72251644151733e-07!GO:0008026;ATP-dependent helicase activity;3.7480258260946e-07!GO:0048475;coated membrane;3.91274784017744e-07!GO:0030117;membrane coat;3.91274784017744e-07!GO:0043038;amino acid activation;3.98265558164967e-07!GO:0006418;tRNA aminoacylation for protein translation;3.98265558164967e-07!GO:0043039;tRNA aminoacylation;3.98265558164967e-07!GO:0005839;proteasome core complex (sensu Eukaryota);4.35425584364482e-07!GO:0006754;ATP biosynthetic process;4.3704784558853e-07!GO:0006753;nucleoside phosphate metabolic process;4.3704784558853e-07!GO:0000139;Golgi membrane;4.44079938330061e-07!GO:0016787;hydrolase activity;4.55238447609925e-07!GO:0015630;microtubule cytoskeleton;4.57103068014844e-07!GO:0006099;tricarboxylic acid cycle;4.61324230236101e-07!GO:0046356;acetyl-CoA catabolic process;4.61324230236101e-07!GO:0005525;GTP binding;5.13475870483009e-07!GO:0016491;oxidoreductase activity;5.22311841398713e-07!GO:0006364;rRNA processing;8.78593300211652e-07!GO:0065002;intracellular protein transport across a membrane;8.78864358784324e-07!GO:0031982;vesicle;9.97151328751927e-07!GO:0007005;mitochondrion organization and biogenesis;9.97151328751927e-07!GO:0051187;cofactor catabolic process;1.11467409719915e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.14546224729239e-06!GO:0003714;transcription corepressor activity;1.19494677685775e-06!GO:0009117;nucleotide metabolic process;1.2943416231983e-06!GO:0031410;cytoplasmic vesicle;1.41585999915583e-06!GO:0016072;rRNA metabolic process;1.57459431432077e-06!GO:0044440;endosomal part;1.82903953342113e-06!GO:0010008;endosome membrane;1.82903953342113e-06!GO:0006084;acetyl-CoA metabolic process;2.02215988457221e-06!GO:0016853;isomerase activity;2.0608475749554e-06!GO:0009109;coenzyme catabolic process;2.14995050578002e-06!GO:0004298;threonine endopeptidase activity;2.44947930791225e-06!GO:0006793;phosphorus metabolic process;3.02386295860517e-06!GO:0006796;phosphate metabolic process;3.02386295860517e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.5037196997395e-06!GO:0045259;proton-transporting ATP synthase complex;3.53119969257987e-06!GO:0043566;structure-specific DNA binding;3.57223146075159e-06!GO:0003697;single-stranded DNA binding;4.03613390390132e-06!GO:0046930;pore complex;4.10082188271779e-06!GO:0006403;RNA localization;4.53713609385803e-06!GO:0048522;positive regulation of cellular process;4.75898513730795e-06!GO:0045786;negative regulation of progression through cell cycle;4.78402963367053e-06!GO:0000245;spliceosome assembly;4.79678495434238e-06!GO:0006334;nucleosome assembly;4.80703172122091e-06!GO:0005769;early endosome;4.98053442057641e-06!GO:0006613;cotranslational protein targeting to membrane;5.01229955821872e-06!GO:0032561;guanyl ribonucleotide binding;5.31252802151825e-06!GO:0019001;guanyl nucleotide binding;5.31252802151825e-06!GO:0050657;nucleic acid transport;6.04210082504035e-06!GO:0051236;establishment of RNA localization;6.04210082504035e-06!GO:0050658;RNA transport;6.04210082504035e-06!GO:0005798;Golgi-associated vesicle;6.19506762414253e-06!GO:0000279;M phase;7.0924761858127e-06!GO:0005770;late endosome;7.11686362729337e-06!GO:0050789;regulation of biological process;7.81363740331441e-06!GO:0006752;group transfer coenzyme metabolic process;8.43158493132865e-06!GO:0016564;transcription repressor activity;8.62748630707767e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;9.79344051323067e-06!GO:0009108;coenzyme biosynthetic process;9.88016348937127e-06!GO:0032446;protein modification by small protein conjugation;1.00641889144053e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.01726799080499e-05!GO:0051170;nuclear import;1.09539782444985e-05!GO:0045454;cell redox homeostasis;1.21154202327188e-05!GO:0016859;cis-trans isomerase activity;1.32271565693999e-05!GO:0031324;negative regulation of cellular metabolic process;1.44769911655959e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.51794801043279e-05!GO:0016310;phosphorylation;1.51794801043279e-05!GO:0016563;transcription activator activity;1.57450791829064e-05!GO:0016567;protein ubiquitination;1.72291125015333e-05!GO:0007010;cytoskeleton organization and biogenesis;1.78829499127181e-05!GO:0005667;transcription factor complex;1.90984348149427e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.07143938443682e-05!GO:0007243;protein kinase cascade;2.16550949354623e-05!GO:0043623;cellular protein complex assembly;2.16869290202138e-05!GO:0031497;chromatin assembly;2.16869290202138e-05!GO:0006606;protein import into nucleus;2.24920009962602e-05!GO:0005813;centrosome;2.365285113123e-05!GO:0005762;mitochondrial large ribosomal subunit;2.40362214941174e-05!GO:0000315;organellar large ribosomal subunit;2.40362214941174e-05!GO:0030867;rough endoplasmic reticulum membrane;2.76285114847728e-05!GO:0016740;transferase activity;3.00567142055798e-05!GO:0000151;ubiquitin ligase complex;4.59434817993912e-05!GO:0008654;phospholipid biosynthetic process;4.59434817993912e-05!GO:0033116;ER-Golgi intermediate compartment membrane;4.82148249870901e-05!GO:0016568;chromatin modification;5.02118276072989e-05!GO:0005773;vacuole;5.3815928590247e-05!GO:0003724;RNA helicase activity;5.91350575595275e-05!GO:0003713;transcription coactivator activity;6.05666074120674e-05!GO:0009892;negative regulation of metabolic process;7.41947679740626e-05!GO:0005815;microtubule organizing center;8.29770933332101e-05!GO:0006612;protein targeting to membrane;9.63470109625054e-05!GO:0008361;regulation of cell size;0.000102325282608774!GO:0019899;enzyme binding;0.000104211567740714!GO:0030029;actin filament-based process;0.000104292801880905!GO:0051028;mRNA transport;0.000110787199062902!GO:0008092;cytoskeletal protein binding;0.000115716270144883!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000118446338557236!GO:0007264;small GTPase mediated signal transduction;0.000122678498938275!GO:0016779;nucleotidyltransferase activity;0.000122821011087757!GO:0043021;ribonucleoprotein binding;0.000146042089775761!GO:0005791;rough endoplasmic reticulum;0.000146042089775761!GO:0031968;organelle outer membrane;0.000151514452480849!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000157960343632989!GO:0016049;cell growth;0.000159417994175749!GO:0030133;transport vesicle;0.000162606117471303!GO:0006091;generation of precursor metabolites and energy;0.000171371397734686!GO:0051427;hormone receptor binding;0.000190400472303025!GO:0005905;coated pit;0.000199385228002614!GO:0051789;response to protein stimulus;0.000201480912854562!GO:0006986;response to unfolded protein;0.000201480912854562!GO:0005048;signal sequence binding;0.000213970058630339!GO:0005885;Arp2/3 protein complex;0.00023264298292894!GO:0019867;outer membrane;0.000244215664036778!GO:0004576;oligosaccharyl transferase activity;0.000267268592786349!GO:0008250;oligosaccharyl transferase complex;0.000290265662122685!GO:0001558;regulation of cell growth;0.00029223080722535!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000329492656473979!GO:0015980;energy derivation by oxidation of organic compounds;0.000355287950219829!GO:0000323;lytic vacuole;0.000386643347841021!GO:0005764;lysosome;0.000386643347841021!GO:0035257;nuclear hormone receptor binding;0.000389364292447358!GO:0016126;sterol biosynthetic process;0.000406568787099556!GO:0000314;organellar small ribosomal subunit;0.00041002499669397!GO:0005763;mitochondrial small ribosomal subunit;0.00041002499669397!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000428721986600082!GO:0030663;COPI coated vesicle membrane;0.000489029376187535!GO:0030126;COPI vesicle coat;0.000489029376187535!GO:0051329;interphase of mitotic cell cycle;0.000489449104128925!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000502821548425001!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000523487821052972!GO:0018196;peptidyl-asparagine modification;0.000614418248793665!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000614418248793665!GO:0001726;ruffle;0.000625524800933748!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000644311229195206!GO:0005741;mitochondrial outer membrane;0.000670592575329885!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000689333809444334!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000737284003367897!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000762729148583119!GO:0048518;positive regulation of biological process;0.000762729148583119!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000770958640161597!GO:0030659;cytoplasmic vesicle membrane;0.000805688160485394!GO:0051920;peroxiredoxin activity;0.000807407745356204!GO:0042802;identical protein binding;0.000824884141231628!GO:0005819;spindle;0.000864453687474025!GO:0016481;negative regulation of transcription;0.000895431446838193!GO:0048468;cell development;0.000941331902511912!GO:0008610;lipid biosynthetic process;0.000942949442004029!GO:0051325;interphase;0.000953177390986999!GO:0016044;membrane organization and biogenesis;0.000969938003897155!GO:0016363;nuclear matrix;0.00106226450570303!GO:0006891;intra-Golgi vesicle-mediated transport;0.00107954778549949!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00111012973835437!GO:0006950;response to stress;0.00125819737580659!GO:0006839;mitochondrial transport;0.00132343221924557!GO:0003899;DNA-directed RNA polymerase activity;0.00134808757942654!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0013766280407421!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00138065504772256!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00138065504772256!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00138065504772256!GO:0008186;RNA-dependent ATPase activity;0.00138065504772256!GO:0030137;COPI-coated vesicle;0.00148482930533324!GO:0003690;double-stranded DNA binding;0.00152658478724763!GO:0019843;rRNA binding;0.00154006255504098!GO:0008047;enzyme activator activity;0.00156121289664081!GO:0048500;signal recognition particle;0.00157902356945915!GO:0048471;perinuclear region of cytoplasm;0.00159221407026205!GO:0016197;endosome transport;0.00160198483513486!GO:0000075;cell cycle checkpoint;0.0016247453612564!GO:0044262;cellular carbohydrate metabolic process;0.00164440875334999!GO:0043681;protein import into mitochondrion;0.00170854207593817!GO:0065007;biological regulation;0.00177592920589493!GO:0007050;cell cycle arrest;0.0018503861596856!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00185313416739817!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00185313416739817!GO:0007051;spindle organization and biogenesis;0.00190675804814995!GO:0030658;transport vesicle membrane;0.00190999628604318!GO:0044433;cytoplasmic vesicle part;0.00198739499259867!GO:0006261;DNA-dependent DNA replication;0.00199281588001326!GO:0046474;glycerophospholipid biosynthetic process;0.00206991924906936!GO:0065009;regulation of a molecular function;0.0021362618560973!GO:0030027;lamellipodium;0.00217514886101458!GO:0009165;nucleotide biosynthetic process;0.0022721381169109!GO:0006626;protein targeting to mitochondrion;0.00233797841955213!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00243408589430278!GO:0030134;ER to Golgi transport vesicle;0.00246291594427905!GO:0030176;integral to endoplasmic reticulum membrane;0.00265176553272545!GO:0009967;positive regulation of signal transduction;0.00273593051451885!GO:0008632;apoptotic program;0.00285728192921746!GO:0006414;translational elongation;0.00301797658585936!GO:0015631;tubulin binding;0.00305378607315853!GO:0031072;heat shock protein binding;0.0030567167315258!GO:0030127;COPII vesicle coat;0.00306493590258622!GO:0012507;ER to Golgi transport vesicle membrane;0.00306493590258622!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00307083798611168!GO:0031901;early endosome membrane;0.00307094238163159!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00308493411264818!GO:0003729;mRNA binding;0.00308493411264818!GO:0000786;nucleosome;0.00309182969661794!GO:0051168;nuclear export;0.00317143010433779!GO:0030132;clathrin coat of coated pit;0.00325487869535258!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00333224051543809!GO:0045047;protein targeting to ER;0.00333224051543809!GO:0006695;cholesterol biosynthetic process;0.00335937199767738!GO:0008243;plasminogen activator activity;0.00349220865803193!GO:0012506;vesicle membrane;0.00361447438861187!GO:0004004;ATP-dependent RNA helicase activity;0.00363819665444185!GO:0008312;7S RNA binding;0.00402297861338328!GO:0000059;protein import into nucleus, docking;0.00402921761079164!GO:0006892;post-Golgi vesicle-mediated transport;0.00419613136384934!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00427355195113295!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00447814070779903!GO:0045045;secretory pathway;0.00468844695127465!GO:0046489;phosphoinositide biosynthetic process;0.00469487179585151!GO:0030660;Golgi-associated vesicle membrane;0.00497580970657235!GO:0008139;nuclear localization sequence binding;0.00504026662803706!GO:0051252;regulation of RNA metabolic process;0.00512039355932668!GO:0031418;L-ascorbic acid binding;0.00519219518723872!GO:0031543;peptidyl-proline dioxygenase activity;0.00523693720989313!GO:0006979;response to oxidative stress;0.0053859913393495!GO:0006740;NADPH regeneration;0.00539124205644759!GO:0006098;pentose-phosphate shunt;0.00539124205644759!GO:0017166;vinculin binding;0.00562931021347851!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00562931021347851!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00562931021347851!GO:0005684;U2-dependent spliceosome;0.00562931021347851!GO:0043284;biopolymer biosynthetic process;0.00572285532406398!GO:0006383;transcription from RNA polymerase III promoter;0.00573303297726204!GO:0005874;microtubule;0.00596518607102863!GO:0048487;beta-tubulin binding;0.0059974257387299!GO:0030118;clathrin coat;0.00610107626207148!GO:0035258;steroid hormone receptor binding;0.00620718824873582!GO:0046467;membrane lipid biosynthetic process;0.00626197273187519!GO:0000776;kinetochore;0.0062829211688329!GO:0008180;signalosome;0.00632115172897526!GO:0007006;mitochondrial membrane organization and biogenesis;0.00690384513970172!GO:0046483;heterocycle metabolic process;0.00715022245152911!GO:0005096;GTPase activator activity;0.00742814169015865!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00809722008171593!GO:0015399;primary active transmembrane transporter activity;0.00809722008171593!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00818489465776178!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0083973835608793!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00845284434496885!GO:0006509;membrane protein ectodomain proteolysis;0.0085275706153782!GO:0033619;membrane protein proteolysis;0.0085275706153782!GO:0045893;positive regulation of transcription, DNA-dependent;0.00874300007744075!GO:0015992;proton transport;0.00884598156589307!GO:0006650;glycerophospholipid metabolic process;0.00884744732098167!GO:0030521;androgen receptor signaling pathway;0.0089166238875803!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00904349266908085!GO:0006818;hydrogen transport;0.00908442630153437!GO:0040008;regulation of growth;0.00915048595277416!GO:0045941;positive regulation of transcription;0.00916595795770553!GO:0019798;procollagen-proline dioxygenase activity;0.00929301580193715!GO:0016272;prefoldin complex;0.00934227618314781!GO:0006302;double-strand break repair;0.00948086968074884!GO:0022406;membrane docking;0.00974986676101909!GO:0048278;vesicle docking;0.00974986676101909!GO:0016860;intramolecular oxidoreductase activity;0.0100950829349449!GO:0005869;dynactin complex;0.0103456183581137!GO:0008094;DNA-dependent ATPase activity;0.0108301696479579!GO:0000339;RNA cap binding;0.0108963450866143!GO:0006595;polyamine metabolic process;0.010918055710651!GO:0005862;muscle thin filament tropomyosin;0.0112941979271313!GO:0000082;G1/S transition of mitotic cell cycle;0.0113962570896832!GO:0003756;protein disulfide isomerase activity;0.0114755189809465!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0114755189809465!GO:0003684;damaged DNA binding;0.011566007157843!GO:0043022;ribosome binding;0.0116718963525024!GO:0005657;replication fork;0.0118236244981914!GO:0000775;chromosome, pericentric region;0.0119427083043998!GO:0030880;RNA polymerase complex;0.0119427083043998!GO:0033673;negative regulation of kinase activity;0.0119427083043998!GO:0006469;negative regulation of protein kinase activity;0.0119427083043998!GO:0044452;nucleolar part;0.0128934573218628!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0130082252088462!GO:0005637;nuclear inner membrane;0.0130559709110887!GO:0007030;Golgi organization and biogenesis;0.013103727935308!GO:0051087;chaperone binding;0.0131262710834088!GO:0003678;DNA helicase activity;0.0135590386527371!GO:0003779;actin binding;0.0136456977664542!GO:0006904;vesicle docking during exocytosis;0.0140873860143914!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0142124219221852!GO:0015002;heme-copper terminal oxidase activity;0.0142124219221852!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0142124219221852!GO:0004129;cytochrome-c oxidase activity;0.0142124219221852!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0143328618647706!GO:0003711;transcription elongation regulator activity;0.0144847064204169!GO:0051348;negative regulation of transferase activity;0.014753391853192!GO:0006007;glucose catabolic process;0.0147935931736386!GO:0007093;mitotic cell cycle checkpoint;0.014945040616548!GO:0005832;chaperonin-containing T-complex;0.0151900082196622!GO:0048144;fibroblast proliferation;0.0152389525314289!GO:0048145;regulation of fibroblast proliferation;0.0152389525314289!GO:0032984;macromolecular complex disassembly;0.0156267158420298!GO:0051101;regulation of DNA binding;0.016245437859878!GO:0031529;ruffle organization and biogenesis;0.0163702031381904!GO:0019222;regulation of metabolic process;0.0167224362581558!GO:0030125;clathrin vesicle coat;0.0171720227868955!GO:0030665;clathrin coated vesicle membrane;0.0171720227868955!GO:0030384;phosphoinositide metabolic process;0.0174911989719367!GO:0051270;regulation of cell motility;0.0177955761805803!GO:0006402;mRNA catabolic process;0.0180568504863679!GO:0051052;regulation of DNA metabolic process;0.0181426413691282!GO:0008033;tRNA processing;0.0191886768362818!GO:0043488;regulation of mRNA stability;0.0193113582209119!GO:0043487;regulation of RNA stability;0.0193113582209119!GO:0051128;regulation of cellular component organization and biogenesis;0.0193588360082631!GO:0003746;translation elongation factor activity;0.0194857860420347!GO:0004674;protein serine/threonine kinase activity;0.0196762035004196!GO:0007242;intracellular signaling cascade;0.0196762035004196!GO:0005801;cis-Golgi network;0.0198938650107366!GO:0008234;cysteine-type peptidase activity;0.0200482878222306!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0203286598191277!GO:0000049;tRNA binding;0.0205984393306617!GO:0031902;late endosome membrane;0.0205984393306617!GO:0031625;ubiquitin protein ligase binding;0.0207540475786306!GO:0030119;AP-type membrane coat adaptor complex;0.0210230941587729!GO:0007040;lysosome organization and biogenesis;0.0214440245151105!GO:0004177;aminopeptidase activity;0.0216219494001336!GO:0006497;protein amino acid lipidation;0.0216219494001336!GO:0048146;positive regulation of fibroblast proliferation;0.0216484302683698!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0219679268008379!GO:0000428;DNA-directed RNA polymerase complex;0.0219679268008379!GO:0051540;metal cluster binding;0.0221260876968642!GO:0051536;iron-sulfur cluster binding;0.0221260876968642!GO:0006352;transcription initiation;0.0229201391404374!GO:0006739;NADP metabolic process;0.0232318688660846!GO:0050681;androgen receptor binding;0.0235125451159241!GO:0001516;prostaglandin biosynthetic process;0.0235125451159241!GO:0046457;prostanoid biosynthetic process;0.0235125451159241!GO:0030041;actin filament polymerization;0.0236099928039448!GO:0006611;protein export from nucleus;0.0237267395610287!GO:0007052;mitotic spindle organization and biogenesis;0.0242028375692735!GO:0045792;negative regulation of cell size;0.0244699026421474!GO:0000792;heterochromatin;0.0246572218653491!GO:0051287;NAD binding;0.0249748574100718!GO:0022890;inorganic cation transmembrane transporter activity;0.0252664024625493!GO:0043241;protein complex disassembly;0.0252664024625493!GO:0030308;negative regulation of cell growth;0.0254140582947371!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.025669501792756!GO:0000209;protein polyubiquitination;0.0265998047983945!GO:0050790;regulation of catalytic activity;0.0266846781377881!GO:0016408;C-acyltransferase activity;0.0267634041981742!GO:0043065;positive regulation of apoptosis;0.0268232571850628!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0270423076132269!GO:0030032;lamellipodium biogenesis;0.0270502026840961!GO:0032940;secretion by cell;0.0273704231191055!GO:0016584;nucleosome positioning;0.0274062550753896!GO:0006778;porphyrin metabolic process;0.0278104670102849!GO:0033013;tetrapyrrole metabolic process;0.0278104670102849!GO:0000096;sulfur amino acid metabolic process;0.0285588782380304!GO:0030433;ER-associated protein catabolic process;0.0287673864333734!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0287673864333734!GO:0004287;prolyl oligopeptidase activity;0.0287903069245977!GO:0008154;actin polymerization and/or depolymerization;0.0287940238892996!GO:0045892;negative regulation of transcription, DNA-dependent;0.0287940238892996!GO:0043068;positive regulation of programmed cell death;0.0289481302617344!GO:0006417;regulation of translation;0.0289658487451745!GO:0008283;cell proliferation;0.0289658487451745!GO:0030518;steroid hormone receptor signaling pathway;0.0289658487451745!GO:0046519;sphingoid metabolic process;0.0293068566799223!GO:0007265;Ras protein signal transduction;0.0293647796178713!GO:0016251;general RNA polymerase II transcription factor activity;0.0296891058504024!GO:0007033;vacuole organization and biogenesis;0.0302481501609267!GO:0003682;chromatin binding;0.0306283563259776!GO:0009116;nucleoside metabolic process;0.0307389571075739!GO:0009112;nucleobase metabolic process;0.0311227896583697!GO:0007021;tubulin folding;0.0314162555500329!GO:0031371;ubiquitin conjugating enzyme complex;0.0319738620351618!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0322239000092731!GO:0030833;regulation of actin filament polymerization;0.032877024032311!GO:0009225;nucleotide-sugar metabolic process;0.0331024812233976!GO:0006289;nucleotide-excision repair;0.033184499226575!GO:0045936;negative regulation of phosphate metabolic process;0.033184499226575!GO:0006607;NLS-bearing substrate import into nucleus;0.0336960105625582!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0336960105625582!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0336960105625582!GO:0050811;GABA receptor binding;0.0339207027183613!GO:0007088;regulation of mitosis;0.0340719676538157!GO:0051272;positive regulation of cell motility;0.0347747886026934!GO:0040017;positive regulation of locomotion;0.0347747886026934!GO:0006354;RNA elongation;0.0347747886026934!GO:0030131;clathrin adaptor complex;0.0347886073174244!GO:0031301;integral to organelle membrane;0.0348248679566149!GO:0005581;collagen;0.0349040067141872!GO:0043624;cellular protein complex disassembly;0.0349672729374951!GO:0043492;ATPase activity, coupled to movement of substances;0.0350293742931479!GO:0006672;ceramide metabolic process;0.0353186400322117!GO:0031124;mRNA 3'-end processing;0.0356868579810874!GO:0006769;nicotinamide metabolic process;0.036201608405997!GO:0022411;cellular component disassembly;0.036201608405997!GO:0007034;vacuolar transport;0.0366006601893644!GO:0008022;protein C-terminus binding;0.0372813466091118!GO:0006401;RNA catabolic process;0.0380839871862702!GO:0005100;Rho GTPase activator activity;0.038147484493545!GO:0006720;isoprenoid metabolic process;0.0387490290337378!GO:0042168;heme metabolic process;0.0387490290337378!GO:0006310;DNA recombination;0.039459837830715!GO:0051539;4 iron, 4 sulfur cluster binding;0.03960648164321!GO:0005784;translocon complex;0.0404809495834366!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0407709511902205!GO:0005938;cell cortex;0.0416463898492552!GO:0022408;negative regulation of cell-cell adhesion;0.0417829693421714!GO:0030145;manganese ion binding;0.0422827409643725!GO:0006506;GPI anchor biosynthetic process;0.0425109323844077!GO:0004003;ATP-dependent DNA helicase activity;0.04287497744798!GO:0046426;negative regulation of JAK-STAT cascade;0.04287497744798!GO:0008538;proteasome activator activity;0.04287497744798!GO:0006144;purine base metabolic process;0.0432260855999723!GO:0030911;TPR domain binding;0.0433383498647622!GO:0005099;Ras GTPase activator activity;0.0439900704675922!GO:0007017;microtubule-based process;0.0443015775206863!GO:0030508;thiol-disulfide exchange intermediate activity;0.0444067435447178!GO:0040011;locomotion;0.0446539931571406!GO:0005586;collagen type III;0.0451229012314985!GO:0006376;mRNA splice site selection;0.0451564197333566!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0451564197333566!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0456212015062427!GO:0006984;ER-nuclear signaling pathway;0.0461349587193562!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0464525964092634!GO:0032508;DNA duplex unwinding;0.0475092024673343!GO:0032392;DNA geometric change;0.0475092024673343!GO:0006505;GPI anchor metabolic process;0.0475575849136959!GO:0035035;histone acetyltransferase binding;0.0486757526227276!GO:0030100;regulation of endocytosis;0.0486965216292262!GO:0005521;lamin binding;0.0495565569762133!GO:0015036;disulfide oxidoreductase activity;0.0499844976563069 | |||
|sample_id=11760 | |sample_id=11760 | ||
|sample_note= | |sample_note= | ||
| Line 75: | Line 99: | ||
|sample_tissue=ovary | |sample_tissue=ovary | ||
|top_motifs=HSF1,2:1.71757376762;NKX3-1:1.69233020144;TAL1_TCF{3,4,12}:1.48727960559;HBP1_HMGB_SSRP1_UBTF:1.18496528004;SRF:1.16619287965;ALX4:1.1647912356;ZNF238:1.15951868447;GZF1:1.15237947499;HIF1A:1.14587292974;TEF:1.12859168147;CDC5L:0.975559385393;ZNF384:0.952785496494;HOX{A5,B5}:0.941997575631;PAX8:0.93187770944;EN1,2:0.904140985288;NFATC1..3:0.898073174627;TLX2:0.882019138491;CRX:0.866334155035;PAX4:0.846486426058;MYBL2:0.783031005036;TEAD1:0.77606773588;NFIX:0.764317284392;IKZF1:0.732938168419;XCPE1{core}:0.719074571338;TLX1..3_NFIC{dimer}:0.705119085993;POU3F1..4:0.693194737774;ATF6:0.660194746968;UFEwm:0.656228395233;ONECUT1,2:0.654439715765;TBP:0.634856587489;NFE2L2:0.634289412675;PRDM1:0.625966736823;GLI1..3:0.615541309368;GTF2A1,2:0.611724320662;AIRE:0.609756941075;EVI1:0.587805145019;NKX2-2,8:0.562927156582;TFCP2:0.546807733477;MZF1:0.53725897708;HMGA1,2:0.532868475359;RFX1:0.523753896649;GTF2I:0.513206902337;DBP:0.509291402064;FOX{I1,J2}:0.467406972913;SMAD1..7,9:0.464508880014;PAX1,9:0.464083842535;BACH2:0.456221169048;ALX1:0.434104241478;TBX4,5:0.428313560518;TP53:0.417376491217;HLF:0.411154564826;NANOG{mouse}:0.409713069356;POU6F1:0.405353078379;FOS_FOS{B,L1}_JUN{B,D}:0.402474712108;EBF1:0.401626141221;MAZ:0.398594925819;GFI1B:0.396456490567;AHR_ARNT_ARNT2:0.3921272907;HOX{A4,D4}:0.374363576451;ELK1,4_GABP{A,B1}:0.370316692775;ZIC1..3:0.369030735635;POU5F1:0.352289186895;NKX2-1,4:0.344278695622;SOX17:0.33546377283;ZBTB6:0.313628585133;KLF4:0.306307900084;LEF1_TCF7_TCF7L1,2:0.291490079213;POU2F1..3:0.280018586662;AR:0.278117207593;RXR{A,B,G}:0.268121832141;SPZ1:0.264765443853;XBP1:0.247292387992;FOXM1:0.229336767018;MTE{core}:0.22617557603;JUN:0.221888136084;RXRA_VDR{dimer}:0.215221965977;RUNX1..3:0.205387623152;PAX3,7:0.20261122189;NR3C1:0.198500023098;PPARG:0.196250066755;EGR1..3:0.195788989416;NR6A1:0.171725472659;NFE2:0.163165483709;PATZ1:0.159758277102;NKX3-2:0.158112327851;ATF2:0.157685128847;TFDP1:0.151730674602;ARID5B:0.150338600775;MAFB:0.139438621066;TFAP2B:0.130881814375;ZNF148:0.0905953409919;HNF1A:0.0887202117125;NFE2L1:0.088090504979;NHLH1,2:0.0802073512877;TFAP2{A,C}:0.0745149903449;GCM1,2:0.0735684751212;NFKB1_REL_RELA:0.0691797499046;GFI1:0.0681303758913;FOSL2:0.0674407733795;HIC1:0.0665126063176;ZBTB16:0.0513594275154;NKX6-1,2:0.0307804276935;PAX5:0.0241705359388;PAX2:0.0144914689293;HOXA9_MEIS1:0.00877907091124;SOX2:0.00462560441695;E2F1..5:-0.00161066407798;ZNF143:-0.0058889410447;HES1:-0.00624036099148;STAT1,3:-0.016281670644;PBX1:-0.0167109100804;ELF1,2,4:-0.0170826381505;ZFP161:-0.0203576078915;MED-1{core}:-0.0285779382802;LHX3,4:-0.0323642457473;GATA4:-0.0349696874127;SP1:-0.0431293998396;NRF1:-0.0432752856424;IRF1,2:-0.0610023029757;MYFfamily:-0.0715604942396;CDX1,2,4:-0.0768140220827;NFIL3:-0.0903378791549;ESR1:-0.0950076496527;PRRX1,2:-0.118851806213;SOX{8,9,10}:-0.139790743492;CREB1:-0.142192866659;RREB1:-0.146704022625;TFAP4:-0.148636538104;MTF1:-0.155749447923;EP300:-0.175910702036;STAT2,4,6:-0.176306550359;FOXL1:-0.17696940316;GATA6:-0.190220786555;STAT5{A,B}:-0.193202622047;FOXQ1:-0.193623998916;HMX1:-0.19502344928;REST:-0.202957870472;MEF2{A,B,C,D}:-0.2081592777;SOX5:-0.208339016416;POU1F1:-0.20865787857;DMAP1_NCOR{1,2}_SMARC:-0.20887731986;ADNP_IRX_SIX_ZHX:-0.212010882243;HAND1,2:-0.222360084265;HNF4A_NR2F1,2:-0.230563825235;NFY{A,B,C}:-0.234403195011;ETS1,2:-0.247154466774;MYB:-0.283805141675;IRF7:-0.302488483557;FOXN1:-0.305361778221;ATF5_CREB3:-0.345320886733;ZNF423:-0.356431010111;FOXD3:-0.361773376716;SPI1:-0.370722087557;YY1:-0.372039074751;CEBPA,B_DDIT3:-0.383261634721;OCT4_SOX2{dimer}:-0.387698756736;bHLH_family:-0.393797567738;PAX6:-0.40183064737;RFX2..5_RFXANK_RFXAP:-0.415738808287;TOPORS:-0.421432423366;SREBF1,2:-0.429029296638;BPTF:-0.448311920784;FOXP3:-0.490644811872;ATF4:-0.50079050347;NR1H4:-0.511577696899;SPIB:-0.540042844867;FOXP1:-0.544426153512;FOXA2:-0.549078917335;IKZF2:-0.568261815288;ZEB1:-0.581374489536;FOXO1,3,4:-0.5878086759;NR5A1,2:-0.598894130885;FOX{D1,D2}:-0.613355993979;LMO2:-0.647360133663;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.6739042192;TGIF1:-0.675301279653;NKX2-3_NKX2-5:-0.677299467238;BREu{core}:-0.687374754382;CUX2:-0.72885832234;SNAI1..3:-0.733682910347;RBPJ:-0.755478833353;NANOG:-0.772804320728;RORA:-0.799164724683;PITX1..3:-0.863673501573;MYOD1:-0.883200015426;ESRRA:-0.915600263994;T:-0.947145784093;VSX1,2:-0.949980474846;HOX{A6,A7,B6,B7}:-0.996231477996;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.04780851997;FOX{F1,F2,J1}:-1.14215579708;PDX1:-1.33493430522 | |top_motifs=HSF1,2:1.71757376762;NKX3-1:1.69233020144;TAL1_TCF{3,4,12}:1.48727960559;HBP1_HMGB_SSRP1_UBTF:1.18496528004;SRF:1.16619287965;ALX4:1.1647912356;ZNF238:1.15951868447;GZF1:1.15237947499;HIF1A:1.14587292974;TEF:1.12859168147;CDC5L:0.975559385393;ZNF384:0.952785496494;HOX{A5,B5}:0.941997575631;PAX8:0.93187770944;EN1,2:0.904140985288;NFATC1..3:0.898073174627;TLX2:0.882019138491;CRX:0.866334155035;PAX4:0.846486426058;MYBL2:0.783031005036;TEAD1:0.77606773588;NFIX:0.764317284392;IKZF1:0.732938168419;XCPE1{core}:0.719074571338;TLX1..3_NFIC{dimer}:0.705119085993;POU3F1..4:0.693194737774;ATF6:0.660194746968;UFEwm:0.656228395233;ONECUT1,2:0.654439715765;TBP:0.634856587489;NFE2L2:0.634289412675;PRDM1:0.625966736823;GLI1..3:0.615541309368;GTF2A1,2:0.611724320662;AIRE:0.609756941075;EVI1:0.587805145019;NKX2-2,8:0.562927156582;TFCP2:0.546807733477;MZF1:0.53725897708;HMGA1,2:0.532868475359;RFX1:0.523753896649;GTF2I:0.513206902337;DBP:0.509291402064;FOX{I1,J2}:0.467406972913;SMAD1..7,9:0.464508880014;PAX1,9:0.464083842535;BACH2:0.456221169048;ALX1:0.434104241478;TBX4,5:0.428313560518;TP53:0.417376491217;HLF:0.411154564826;NANOG{mouse}:0.409713069356;POU6F1:0.405353078379;FOS_FOS{B,L1}_JUN{B,D}:0.402474712108;EBF1:0.401626141221;MAZ:0.398594925819;GFI1B:0.396456490567;AHR_ARNT_ARNT2:0.3921272907;HOX{A4,D4}:0.374363576451;ELK1,4_GABP{A,B1}:0.370316692775;ZIC1..3:0.369030735635;POU5F1:0.352289186895;NKX2-1,4:0.344278695622;SOX17:0.33546377283;ZBTB6:0.313628585133;KLF4:0.306307900084;LEF1_TCF7_TCF7L1,2:0.291490079213;POU2F1..3:0.280018586662;AR:0.278117207593;RXR{A,B,G}:0.268121832141;SPZ1:0.264765443853;XBP1:0.247292387992;FOXM1:0.229336767018;MTE{core}:0.22617557603;JUN:0.221888136084;RXRA_VDR{dimer}:0.215221965977;RUNX1..3:0.205387623152;PAX3,7:0.20261122189;NR3C1:0.198500023098;PPARG:0.196250066755;EGR1..3:0.195788989416;NR6A1:0.171725472659;NFE2:0.163165483709;PATZ1:0.159758277102;NKX3-2:0.158112327851;ATF2:0.157685128847;TFDP1:0.151730674602;ARID5B:0.150338600775;MAFB:0.139438621066;TFAP2B:0.130881814375;ZNF148:0.0905953409919;HNF1A:0.0887202117125;NFE2L1:0.088090504979;NHLH1,2:0.0802073512877;TFAP2{A,C}:0.0745149903449;GCM1,2:0.0735684751212;NFKB1_REL_RELA:0.0691797499046;GFI1:0.0681303758913;FOSL2:0.0674407733795;HIC1:0.0665126063176;ZBTB16:0.0513594275154;NKX6-1,2:0.0307804276935;PAX5:0.0241705359388;PAX2:0.0144914689293;HOXA9_MEIS1:0.00877907091124;SOX2:0.00462560441695;E2F1..5:-0.00161066407798;ZNF143:-0.0058889410447;HES1:-0.00624036099148;STAT1,3:-0.016281670644;PBX1:-0.0167109100804;ELF1,2,4:-0.0170826381505;ZFP161:-0.0203576078915;MED-1{core}:-0.0285779382802;LHX3,4:-0.0323642457473;GATA4:-0.0349696874127;SP1:-0.0431293998396;NRF1:-0.0432752856424;IRF1,2:-0.0610023029757;MYFfamily:-0.0715604942396;CDX1,2,4:-0.0768140220827;NFIL3:-0.0903378791549;ESR1:-0.0950076496527;PRRX1,2:-0.118851806213;SOX{8,9,10}:-0.139790743492;CREB1:-0.142192866659;RREB1:-0.146704022625;TFAP4:-0.148636538104;MTF1:-0.155749447923;EP300:-0.175910702036;STAT2,4,6:-0.176306550359;FOXL1:-0.17696940316;GATA6:-0.190220786555;STAT5{A,B}:-0.193202622047;FOXQ1:-0.193623998916;HMX1:-0.19502344928;REST:-0.202957870472;MEF2{A,B,C,D}:-0.2081592777;SOX5:-0.208339016416;POU1F1:-0.20865787857;DMAP1_NCOR{1,2}_SMARC:-0.20887731986;ADNP_IRX_SIX_ZHX:-0.212010882243;HAND1,2:-0.222360084265;HNF4A_NR2F1,2:-0.230563825235;NFY{A,B,C}:-0.234403195011;ETS1,2:-0.247154466774;MYB:-0.283805141675;IRF7:-0.302488483557;FOXN1:-0.305361778221;ATF5_CREB3:-0.345320886733;ZNF423:-0.356431010111;FOXD3:-0.361773376716;SPI1:-0.370722087557;YY1:-0.372039074751;CEBPA,B_DDIT3:-0.383261634721;OCT4_SOX2{dimer}:-0.387698756736;bHLH_family:-0.393797567738;PAX6:-0.40183064737;RFX2..5_RFXANK_RFXAP:-0.415738808287;TOPORS:-0.421432423366;SREBF1,2:-0.429029296638;BPTF:-0.448311920784;FOXP3:-0.490644811872;ATF4:-0.50079050347;NR1H4:-0.511577696899;SPIB:-0.540042844867;FOXP1:-0.544426153512;FOXA2:-0.549078917335;IKZF2:-0.568261815288;ZEB1:-0.581374489536;FOXO1,3,4:-0.5878086759;NR5A1,2:-0.598894130885;FOX{D1,D2}:-0.613355993979;LMO2:-0.647360133663;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.6739042192;TGIF1:-0.675301279653;NKX2-3_NKX2-5:-0.677299467238;BREu{core}:-0.687374754382;CUX2:-0.72885832234;SNAI1..3:-0.733682910347;RBPJ:-0.755478833353;NANOG:-0.772804320728;RORA:-0.799164724683;PITX1..3:-0.863673501573;MYOD1:-0.883200015426;ESRRA:-0.915600263994;T:-0.947145784093;VSX1,2:-0.949980474846;HOX{A6,A7,B6,B7}:-0.996231477996;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.04780851997;FOX{F1,F2,J1}:-1.14215579708;PDX1:-1.33493430522 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11760-123H5;search_select_hide=table117:FF:11760-123H5 | |||
}} | }} | ||
Latest revision as of 18:18, 4 June 2020
| Name: | mesenchymal precursor cell - ovarian cancer left ovary, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12376 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12376
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12376
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.173 |
| 10 | 10 | 0.341 |
| 100 | 100 | 0.443 |
| 101 | 101 | 0.936 |
| 102 | 102 | 0.142 |
| 103 | 103 | 0.895 |
| 104 | 104 | 0.773 |
| 105 | 105 | 0.335 |
| 106 | 106 | 0.959 |
| 107 | 107 | 0.364 |
| 108 | 108 | 0.674 |
| 109 | 109 | 0.158 |
| 11 | 11 | 0.478 |
| 110 | 110 | 0.52 |
| 111 | 111 | 0.0621 |
| 112 | 112 | 0.429 |
| 113 | 113 | 0.0177 |
| 114 | 114 | 0.327 |
| 115 | 115 | 0.751 |
| 116 | 116 | 0.511 |
| 117 | 117 | 0.919 |
| 118 | 118 | 0.307 |
| 119 | 119 | 0.407 |
| 12 | 12 | 0.327 |
| 120 | 120 | 0.214 |
| 121 | 121 | 0.757 |
| 122 | 122 | 0.0499 |
| 123 | 123 | 8.68673e-4 |
| 124 | 124 | 0.328 |
| 125 | 125 | 0.798 |
| 126 | 126 | 0.546 |
| 127 | 127 | 0.877 |
| 128 | 128 | 0.918 |
| 129 | 129 | 0.647 |
| 13 | 13 | 0.23 |
| 130 | 130 | 0.619 |
| 131 | 131 | 0.072 |
| 132 | 132 | 0.856 |
| 133 | 133 | 0.706 |
| 134 | 134 | 0.463 |
| 135 | 135 | 0.826 |
| 136 | 136 | 0.937 |
| 137 | 137 | 0.876 |
| 138 | 138 | 0.706 |
| 139 | 139 | 0.748 |
| 14 | 14 | 0.169 |
| 140 | 140 | 0.401 |
| 141 | 141 | 0.569 |
| 142 | 142 | 0.991 |
| 143 | 143 | 0.63 |
| 144 | 144 | 0.747 |
| 145 | 145 | 0.712 |
| 146 | 146 | 0.599 |
| 147 | 147 | 0.235 |
| 148 | 148 | 0.174 |
| 149 | 149 | 0.497 |
| 15 | 15 | 0.492 |
| 150 | 150 | 0.254 |
| 151 | 151 | 0.157 |
| 152 | 152 | 0.177 |
| 153 | 153 | 0.505 |
| 154 | 154 | 0.801 |
| 155 | 155 | 0.00118 |
| 156 | 156 | 0.264 |
| 157 | 157 | 0.145 |
| 158 | 158 | 0.00284 |
| 159 | 159 | 0.135 |
| 16 | 16 | 0.314 |
| 160 | 160 | 0.581 |
| 161 | 161 | 0.353 |
| 162 | 162 | 0.605 |
| 163 | 163 | 0.488 |
| 164 | 164 | 0.761 |
| 165 | 165 | 0.981 |
| 166 | 166 | 0.427 |
| 167 | 167 | 0.209 |
| 168 | 168 | 0.873 |
| 169 | 169 | 0.625 |
| 17 | 17 | 0.734 |
| 18 | 18 | 0.619 |
| 19 | 19 | 0.936 |
| 2 | 2 | 0.743 |
| 20 | 20 | 0.609 |
| 21 | 21 | 0.331 |
| 22 | 22 | 0.767 |
| 23 | 23 | 0.347 |
| 24 | 24 | 0.808 |
| 25 | 25 | 0.0802 |
| 26 | 26 | 0.538 |
| 27 | 27 | 0.719 |
| 28 | 28 | 0.49 |
| 29 | 29 | 0.992 |
| 3 | 3 | 0.717 |
| 30 | 30 | 0.472 |
| 31 | 31 | 0.599 |
| 32 | 32 | 0.0019 |
| 33 | 33 | 0.935 |
| 34 | 34 | 0.926 |
| 35 | 35 | 0.668 |
| 36 | 36 | 0.0365 |
| 37 | 37 | 0.837 |
| 38 | 38 | 0.221 |
| 39 | 39 | 0.424 |
| 4 | 4 | 0.173 |
| 40 | 40 | 0.101 |
| 41 | 41 | 0.232 |
| 42 | 42 | 0.638 |
| 43 | 43 | 0.269 |
| 44 | 44 | 0.659 |
| 45 | 45 | 0.713 |
| 46 | 46 | 0.45 |
| 47 | 47 | 0.205 |
| 48 | 48 | 0.485 |
| 49 | 49 | 0.00693 |
| 5 | 5 | 0.74 |
| 50 | 50 | 0.796 |
| 51 | 51 | 0.476 |
| 52 | 52 | 0.984 |
| 53 | 53 | 0.105 |
| 54 | 54 | 0.591 |
| 55 | 55 | 0.287 |
| 56 | 56 | 0.517 |
| 57 | 57 | 0.302 |
| 58 | 58 | 0.0693 |
| 59 | 59 | 0.407 |
| 6 | 6 | 0.209 |
| 60 | 60 | 0.513 |
| 61 | 61 | 0.195 |
| 62 | 62 | 0.209 |
| 63 | 63 | 0.534 |
| 64 | 64 | 0.408 |
| 65 | 65 | 0.546 |
| 66 | 66 | 0.825 |
| 67 | 67 | 0.986 |
| 68 | 68 | 0.756 |
| 69 | 69 | 0.0649 |
| 7 | 7 | 0.0693 |
| 70 | 70 | 0.0889 |
| 71 | 71 | 0.389 |
| 72 | 72 | 0.405 |
| 73 | 73 | 0.584 |
| 74 | 74 | 0.1 |
| 75 | 75 | 0.803 |
| 76 | 76 | 0.658 |
| 77 | 77 | 0.625 |
| 78 | 78 | 0.0194 |
| 79 | 79 | 0.094 |
| 8 | 8 | 0.603 |
| 80 | 80 | 0.553 |
| 81 | 81 | 0.254 |
| 82 | 82 | 0.176 |
| 83 | 83 | 0.954 |
| 84 | 84 | 0.831 |
| 85 | 85 | 0.935 |
| 86 | 86 | 0.994 |
| 87 | 87 | 0.504 |
| 88 | 88 | 0.977 |
| 89 | 89 | 0.666 |
| 9 | 9 | 0.666 |
| 90 | 90 | 0.997 |
| 91 | 91 | 0.748 |
| 92 | 92 | 0.755 |
| 93 | 93 | 0.625 |
| 94 | 94 | 0.655 |
| 95 | 95 | 0.614 |
| 96 | 96 | 0.482 |
| 97 | 97 | 0.244 |
| 98 | 98 | 0.00673 |
| 99 | 99 | 0.0323 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12376
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000273 human mesenchymal precursor cell- ovarian cancer-left ovary sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002119 (left ovary)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000273 (human mesenchymal precursor cell- ovarian cancer-left ovary sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
