FF:11780-124A7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005426 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008060;DRR008932;DRZ000357;DRZ001742;DRZ011707;DRZ013092 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000624,CL:0000815,CL:0000898,CL:0000792,CL:0002677 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001 | |||
|comment=Previously: CD4-positiveCD25-positiveCD45RA+ memory regulatory T cells, donor1. TODO: full classification | |comment=Previously: CD4-positiveCD25-positiveCD45RA+ memory regulatory T cells, donor1. TODO: full classification | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chrX:49121165..49121179,-!p1@FOXP3!2.23!167.85!FOXP3;;chr3:71355163..71355209,-!p5@FOXP1!2.17!199.46!FOXP1;;chr3:63953435..63953499,+!p1@ATXN7!2.01!100.71!ATXN7;;chr19:54058073..54058088,+!p1@ZNF331!1.94!86.37!ZNF331;;chr4:109087445..109087463,-!p1@LEF1!1.90!77.90!LEF1;;chr19:16435625..16435682,+!p1@KLF2!1.82!1938.59!KLF2;;chr4:109090075..109090095,-!p2@LEF1!1.82!65.51!LEF1;;chr6:91006518..91006570,-!p1@BACH2!1.81!143.08!BACH2;;chr5:133451294..133451310,+!p2@TCF7!1.79!60.30!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.78!58.99!IKZF1;;chr19:54041669..54041697,+!p2@ZNF331!1.77!58.34!ZNF331;;chr10:35484053..35484076,+!p1@CREM!1.76!137.54!CREM;;chr1:25256756..25256774,-!p1@RUNX3!1.75!100.38!RUNX3;;chrX:106960285..106960299,-!p1@TSC22D3!1.72!1302.71!TSC22D3;;chr2:157189180..157189290,-!p1@NR4A2!1.72!257.80!NR4A2;;chr3:71542615..71542644,-!p12@FOXP1!1.72!51.50!FOXP1;;chr19:19779619..19779670,+!p1@ZNF101!1.71!137.21!ZNF101;;chrY:21906594..21906622,-!p1@KDM5D!1.64!42.70!KDM5D;;chr5:133450365..133450444,+!p1@TCF7!1.58!162.31!TCF7;;chr10:35416142..35416169,+!p3@CREM!1.57!93.87!CREM;;chr2:231090433..231090469,+!p1@SP140!1.56!35.20!SP140;;chr19:12902289..12902307,+!p1@JUNB!1.52!6958.44!JUNB;;chr3:18486354..18486377,-!p2@SATB1!1.52!40.09!SATB1;;chr4:109089901..109089930,-!p3@LEF1!1.49!29.98!LEF1;;chr17:37934365..37934387,-!p2@IKZF3!1.49!29.98!IKZF3;;chr6:391743..391759,+!p1@IRF4!1.49!29.98!IRF4;;chr2:100759037..100759058,-!p2@AFF3!1.48!29.01!AFF3;;chr2:97202991..97203043,+!p3@ARID5A!1.45!27.38!ARID5A;;chr17:38497662..38497713,+!p4@RARA!1.43!30.31!RARA;;chr2:100759010..100759035,-!p1@AFF3!1.42!25.10!AFF3;;chr11:128392273..128392308,-!p2@ETS1!1.41!100.71!ETS1;;chr3:71353892..71353928,-!p31@FOXP1!1.41!24.77!FOXP1;;chr14:64971288..64971316,-!p2@ZBTB25!1.39!70.40!ZBTB25;;chr7:50343895..50343936,+!p5@IKZF1!1.39!23.79!IKZF1;;chr9:117150254..117150271,-!p1@AKNA!1.38!61.60!AKNA;;chr10:35416172..35416184,+!p13@CREM!1.38!23.14!CREM;;chr10:35484090..35484104,+!p6@CREM!1.38!23.14!CREM;;chr5:133451347..133451358,+!p3@TCF7!1.37!22.49!TCF7;;chr9:3525727..3525828,-!p2@RFX3!1.36!55.08!RFX3;;chr8:123793988..123794016,+!p1@ZHX2!1.33!35.85!ZHX2;;chr2:192015701..192015743,-!p1@STAT4!1.32!27.05!STAT4;;chr6:91006575..91006602,-!p2@BACH2!1.31!28.68!BACH2;;chr6:91006503..91006517,-!p3@BACH2!1.31!19.56!BACH2;;chr3:71542651..71542683,-!p22@FOXP1!1.31!19.56!FOXP1;;chr4:109089573..109089585,-!p8@LEF1!1.31!19.23!LEF1;;chr2:97202480..97202499,+!p1@ARID5A!1.29!180.89!ARID5A;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.29!102.67!ZNF10;;chr3:18480217..18480239,-!p3@SATB1!1.28!18.25!SATB1;;chr4:109088089..109088101,-!p11@LEF1!1.26!17.27!LEF1;;chr10:35416223..35416234,+!p12@CREM!1.26!17.27!CREM;;chr1:45805693..45805718,+!p3@TOE1!1.25!35.85!TOE1;;chr2:214017168..214017189,-!p8@IKZF2!1.25!16.95!IKZF2;;chr4:38665769..38665801,+!p2@KLF3!1.24!144.06!KLF3;;chr15:60884706..60884743,-!p1@RORA!1.24!83.76!RORA;;chr8:81397846..81397860,+!p3@ZBTB10!1.24!20.53!ZBTB10;;chr7:50344251..50344288,+!p3@IKZF1!1.24!16.30!IKZF1;;chr21:36421535..36421610,-!p2@RUNX1!1.23!56.38!RUNX1;;chr2:192015750..192015793,-!p2@STAT4!1.22!20.86!STAT4;;chr3:71542684..71542720,-!p18@FOXP1!1.22!15.64!FOXP1;;chr4:109088130..109088163,-!p13@LEF1!1.22!15.64!LEF1;;chr9:102584262..102584276,+!p1@NR4A3!1.20!32.92!NR4A3;;chr11:128392085..128392232,-!p1@ETS1!1.19!472.91!ETS1;;chr19:16435523..16435619,+!p2@KLF2!1.19!19.88!KLF2;;chr6:12009042..12009092,+!p6@HIVEP1!1.18!18.58!HIVEP1;;chr19:19779686..19779697,+!p3@ZNF101!1.18!16.62!ZNF101;;chr19:19729477..19729542,-!p1@PBX4!1.17!29.66!PBX4;;chr19:12444440..12444455,-!p1@ZNF563!1.17!24.12!ZNF563;;chr19:54041645..54041661,+!p5@ZNF331!1.17!13.69!ZNF331;;chr13:41240717..41240735,-!p2@FOXO1!1.16!90.28!FOXO1;;chr14:64970670..64970712,-!p3@ZBTB25!1.16!29.01!ZBTB25;;chr2:231090471..231090504,+!p2@SP140!1.16!13.36!SP140;;chr3:63898321..63898396,+!p3@ATXN7!1.14!29.01!ATXN7;;chr16:3313791..3313834,+!p2@ZNF263!1.14!28.68!ZNF263;;chr20:50159198..50159299,-!p1@NFATC2!1.14!18.90!NFATC2;;chr19:54040550..54040594,+!p20@ZNF331!1.14!12.71!ZNF331;;chr9:20620829..20620848,-!p7@MLLT3!1.14!12.71!MLLT3;;chr2:214016254..214016282,-!p7@IKZF2!1.13!12.39!IKZF2;;chr3:71542747..71542766,-!p34@FOXP1!1.13!12.39!FOXP1;;chr4:38665810..38665827,+!p1@KLF3!1.12!176.00!KLF3;;chr3:39195075..39195088,-!p1@CSRNP1!1.12!76.92!CSRNP1;;chr19:16435423..16435484,+!p5@KLF2!1.12!12.06!KLF2;;chr14:75745523..75745537,+!p1@FOS!1.11!1418.09!FOS;;chr9:20621927..20621996,-!p3@MLLT3!1.11!20.21!MLLT3;;chr14:75988771..75988826,+!p1@BATF!1.11!15.97!BATF;;chr12:72056800..72056834,+!p1@THAP2!1.11!15.97!THAP2;;chr13:41593425..41593480,-!p1@ELF1!1.10!73.33!ELF1;;chr18:3449330..3449344,+!p10@TGIF1!1.10!15.32!TGIF1;;chr8:81397876..81397898,+!p5@ZBTB10!1.09!13.36!ZBTB10;;chr9:20622444..20622468,-!p2@MLLT3!1.08!36.18!MLLT3;;chrX:101186981..101187030,-!p1@ZMAT1!1.07!35.20!ZMAT1;;chr17:38497715..38497734,+!p8@RARA!1.07!10.76!RARA;;chr8:81397820..81397836,+!p2@ZBTB10!1.06!13.04!ZBTB10;;chr10:35416125..35416138,+!p10@CREM!1.06!12.39!CREM;;chr2:214015343..214015366,-!p3@IKZF2!1.06!10.43!IKZF2;;chr4:109089996..109090012,-!p5@LEF1!1.05!10.10!LEF1;;chr17:56565257..56565283,-!p2@HSF5!1.05!10.10!HSF5;;chr10:35485013..35485034,+!p15@CREM!1.05!10.10!CREM;;chr19:45971246..45971265,+!p1@FOSB!1.04!187.08!FOSB;;chrX:106960221..106960236,-!p3@TSC22D3!1.04!28.03!TSC22D3;;chr18:77155922..77155939,+!p1@NFATC1!1.04!27.70!NFATC1;;chr9:114287433..114287513,+!p1@ZNF483!1.03!25.42!ZNF483;;chr3:23986824..23986848,+!p2@NR1D2!1.02!54.43!NR1D2;;chr19:52674696..52674758,-!p1@ZNF836!1.02!28.68!ZNF836;;chr8:60031619..60031676,-!p1@TOX!1.02!20.53!TOX;;chr4:109086281..109086319,-!p9@LEF1!1.02!9.45!LEF1;;chr12:57914286..57914304,-!p1@DDIT3!1.01!341.24!DDIT3;;chrX:106960180..106960197,-!p2@TSC22D3!1.01!35.53!TSC22D3;;chr3:71542827..71542838,-!p53@FOXP1!1.01!9.13!FOXP1;;chr20:56195474..56195506,-!p1@ZBP1!1.01!9.13!ZBP1;;chr14:99738138..99738163,-!p1@BCL11B!1.01!9.13!BCL11B;;chr13:41240737..41240787,-!p1@FOXO1!1.00!108.86!FOXO1;;chr2:208394817..208394834,+!p3@CREB1!1.00!36.83!CREB1;;chr15:60884747..60884774,-!p3@RORA!0.99!21.84!RORA;;chr13:74707894..74707947,-!p6@KLF12!0.99!9.78!KLF12;;chrY:2803415..2803468,+!p1@ZFY!0.99!8.80!ZFY;;chr4:109090054..109090073,-!p7@LEF1!0.99!8.80!LEF1;;chr5:142814241..142814278,-!p12@NR3C1!0.99!8.80!NR3C1;;chr19:19843900..19843928,-!p1@ZNF14!0.96!42.04!ZNF14;;chr9:102584241..102584261,+!p4@NR4A3!0.96!12.71!NR4A3;;chr6:106546808..106546833,+!p3@PRDM1!0.96!10.43!PRDM1;;chr12:56418637..56418648,+!p9@IKZF4!0.96!8.15!IKZF4;;chr19:18392422..18392440,-!p1@JUND!0.95!1128.99!JUND;;chr19:45972701..45972774,+!p2@FOSB!0.95!11.08!FOSB;;chr10:8096772..8096787,+!p2@GATA3!0.95!9.45!GATA3;;chr19:16435735..16435773,+!p4@KLF2!0.95!7.82!KLF2;;chr3:18487057..18487105,-!p4@SATB1!0.95!7.82!SATB1;;chr4:109088940..109089037,-!p4@LEF1!0.95!7.82!LEF1;;chr7:99097863..99097936,-!p1@ZNF394!0.94!80.18!ZNF394;;chr19:49140609..49140643,-!p1@DBP!0.94!44.65!DBP;;chr2:157198916..157198978,-!p2@NR4A2!0.94!28.03!NR4A2;;chr5:172483347..172483407,+!p1@C5orf41!0.93!58.99!CREBRF;;chr2:214015111..214015179,-!p1@IKZF2!0.93!13.69!IKZF2;;chr4:109086403..109086421,-!p19@LEF1!0.93!7.50!LEF1;;chr17:38020516..38020544,-!p5@IKZF3!0.93!7.50!IKZF3;;chr12:72056773..72056796,+!p3@THAP2!0.91!9.45!THAP2;;chr7:50344144..50344157,+!p6@IKZF1!0.91!7.17!IKZF1;;chr19:54041574..54041589,+!p6@ZNF331!0.91!7.17!ZNF331;;chr3:71179699..71179744,-!p2@FOXP1!0.90!54.10!FOXP1;;chr14:65569101..65569119,-!p3@MAX!0.90!23.14!MAX;;chr19:22235279..22235301,+!p1@ZNF257!0.90!13.36!ZNF257;;chr12:133706975..133707013,-!p3@ZNF891!0.90!9.45!ZNF891;;chr13:74708246..74708264,-!p8@KLF12!0.90!7.82!KLF12;;chr11:67007548..67007610,+!p3@KDM2A!0.89!52.80!KDM2A;;chr7:21467674..21467727,+!p1@SP4!0.89!28.36!SP4;;chr4:109087906..109087928,-!p12@LEF1!0.89!6.84!LEF1;;chr3:18466787..18466839,-!p1@SATB1!0.88!30.64!SATB1;;chr9:73028332..73028385,-!p3@KLF9!0.88!23.79!KLF9;;chr7:50344289..50344323,+!p1@IKZF1!0.88!6.52!IKZF1;;chr3:18480173..18480189,-!p6@SATB1!0.88!6.52!SATB1;;chr4:149363494..149363543,-!p1@NR3C2!0.88!6.52!NR3C2;;chr4:149365827..149365870,-!p5@NR3C2!0.88!6.52!NR3C2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.86!81.15!ZC3H12A;;chr10:104154246..104154347,+!p3@NFKB2!0.86!40.09!NFKB2;;chr9:3525867..3525902,-!p3@RFX3!0.86!22.49!RFX3;;chr19:12721790..12721810,+!p2@ZNF791!0.86!18.25!ZNF791;;chrY:21906761..21906810,-!p2@KDM5D!0.86!6.19!KDM5D;;chr10:135121763..135121783,+!p5@ZNF511!0.86!6.19!ZNF511;;chr2:214013461..214013517,-!p6@IKZF2!0.86!6.19!IKZF2;;chr4:109090106..109090124,-!p10@LEF1!0.86!6.19!LEF1;;chr6:106546834..106546850,+!p4@PRDM1!0.86!6.19!PRDM1;;chr7:50348268..50348366,+!p4@IKZF1!0.86!6.19!IKZF1;;chr3:101568349..101568365,+!p1@NFKBIZ!0.85!339.61!NFKBIZ;;chr4:140005443..140005527,-!p2@ELF2!0.85!38.13!ELF2;;chr1:91487836..91487854,-!p3@ZNF644!0.85!14.34!ZNF644;;chr9:32550839..32550962,-!p3@TOPORS!0.84!15.64!TOPORS;;chr19:38085768..38085821,+!p1@ZNF540!0.84!9.13!ZNF540;;chr7:104654718..104654741,+!p3@MLL5!0.84!8.80!MLL5;;chr2:231090344..231090361,-!p3@SP110!0.84!5.87!SP110;;chr19:54041603..54041615,+!p10@ZNF331!0.84!5.87!ZNF331;;chr19:9546177..9546224,-!p1@ZNF266!0.83!43.67!ZNF266;;chr13:74708029..74708077,-!p2@KLF12!0.83!17.27!KLF12;;chr10:8096631..8096660,+!p1@GATA3!0.83!7.17!GATA3;;chr19:9879350..9879419,-!p2@ZNF846!0.82!12.39!ZNF846;;chr19:12405606..12405629,-!p2@ZNF44!0.82!11.41!ZNF44;;chr7:50343864..50343888,+!p7@IKZF1!0.82!5.54!IKZF1;;chr19:38086030..38086048,-!p2@ZNF571!0.82!5.54!ZNF571;;chr14:64971893..64971928,-!p8@ZBTB25!0.82!5.54!ZBTB25;;chr2:43453734..43453751,-!p1@ZFP36L2!0.81!633.27!ZFP36L2;;chr7:104654690..104654704,+!p2@MLL5!0.81!11.41!MLL5;;chr17:36861735..36861755,+!p4@MLLT6!0.81!9.78!MLLT6;;chr10:3824332..3824425,-!p4@KLF6!0.81!9.13!KLF6;;chr7:127032330..127032356,-!p3@ZNF800!0.81!7.17!ZNF800;;chr14:69262947..69262986,-!p3@ZFP36L1!0.81!6.84!ZFP36L1;;chr14:90085458..90085557,-!p1@FOXN3!0.80!59.97!FOXN3;;chr2:61108695..61108753,+!p1@REL!0.80!39.76!REL;;chr16:88519669..88519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ID3B;;chr19:47615426..47615439,-!p5@ZC3H4!0.31!3.59!ZC3H4;;chr15:31619871..31619884,+!p8@KLF13!0.31!2.28!KLF13;;chr9:86593238..86593252,-!p3@HNRNPK!0.31!1.96!HNRPK;;chr12:12764917..12764931,+!p4@CREBL2!0.31!1.63!CREBL2;;chr19:9649253..9649265,-!p3@ZNF426!0.31!1.63!ZNF426;;chr21:30671145..30671156,+!p8@BACH1!0.31!1.30!BACH1;;chr9:125667739..125667770,-!p4@RC3H2!0.31!1.30!RC3H2;;chr10:3824229..3824253,-!p7@KLF6!0.31!1.30!KLF6;;chr12:57914481..57914509,+!p5@MBD6!0.31!1.30!MBD6;;chr2:28615716..28615733,+!p1@FOSL2!0.30!85.39!FOSL2;;chr5:16465902..16465917,-!p1@ZNF622!0.30!42.37!ZNF622;;chr1:59165724..59165751,-!p1@MYSM1!0.30!40.74!MYSM1;;chr7:6746529..6746591,-!p1@ZNF12!0.30!24.12!ZNF12;;chr11:130184753..130184824,-!p1@ZBTB44!0.30!24.12!ZBTB44;;chr19:9731872..9731915,-!p1@ZNF561!0.30!23.14!ZNF561;;chr16:68119250..68119293,+!p2@NFATC3!0.30!13.36!NFATC3;;chr17:7382935..7382961,-!p2@ZBTB4!0.30!10.43!ZBTB4;;chr19:45004556..45004581,-!p1@ZNF180!0.30!10.10!ZNF180;;chr5:178286925..178287007,+!p1@ZNF354B!0.30!9.78!ZNF354B;;chr19:58193338..58193386,+!p1@ZNF551,p2@ZNF776!0.30!8.15!ZNF551;;chr18:72922777..72922808,+!p2@TSHZ1!0.30!7.82!TSHZ1;;chr13:74708504..74708549,-!p1@KLF12!0.30!7.50!KLF12;;chr19:58331073..58331084,+!p3@ZNF587!0.30!6.19!ZNF587;;chr2:148778570..148778589,+!p4@MBD5!0.30!4.89!MBD5;;chr12:104532004..104532033,-!p4@NFYB!0.30!4.24!NFYB;;chr6:126102254..126102289,+!p5@NCOA7!0.30!4.24!NCOA7;;chr19:8942909..8942953,-!p2@ZNF558!0.30!3.59!ZNF558;;chr6:42419514..42419606,-!p1@TRERF1!0.30!3.26!TRERF1;;chr7:99070527..99070542,+!p2@ZNF789!0.30!3.26!ZNF789;;chr19:35417798..35417842,+!p1@ZNF30!0.30!2.28!ZNF30;;chr16:30569604..30569629,-!p3@ZNF764!0.30!1.96!ZNF764;;chr16:89787436..89787450,+!p4@ZNF276!0.30!1.63!ZNF276;;chr20:44600199..44600219,-!p3@ZNF335!0.30!1.63!ZNF335;;chr7:106826626..106826630,+!p3@HBP1!0.30!1.30!HBP1;;chr16:88752889..88752921,-!p1@SNAI3!0.30!1.30!SNAI3;;chr17:46622229..46622257,-!p6@HOXB2!0.30!1.30!HOXB2;;chr14:75747296..75747329,+!p4@FOS!0.30!0.98!FOS;;chr14:99737588..99737617,-!p4@BCL11B!0.30!0.98!BCL11B;;chr14:99738106..99738117,-!p9@BCL11B!0.30!0.98!BCL11B;;chr17:37934188..37934202,-!p8@IKZF3!0.30!0.98!IKZF3;;chr17:37934268..37934277,-!p10@IKZF3!0.30!0.98!IKZF3;;chr17:37934392..37934398,-!p11@IKZF3!0.30!0.98!IKZF3;;chr17:41738684..41738704,-!p2@MEOX1!0.30!0.98!MEOX1;;chr18:46477549..46477578,-!p7@SMAD7!0.30!0.98!SMAD7;;chr19:36204309..36204335,+!p1@ZBTB32!0.30!0.98!ZBTB32;;chr1:61542891..61542920,+!p12@NFIA!0.30!0.98!NFIA;;chr1:8586084..8586100,-!p20@RERE!0.30!0.98!RERE;;chr21:36421401..36421414,-!p16@RUNX1!0.30!0.98!RUNX1;;chr10:135121790..135121801,+!p7@ZNF511!0.30!0.98!ZNF511;;chr10:3823938..3823954,-!p13@KLF6!0.30!0.98!KLF6;;chr10:3824206..3824226,-!p10@KLF6!0.30!0.98!KLF6;;chr10:3824309..3824321,-!p15@KLF6!0.30!0.98!KLF6;;chr11:113930477..113930488,+!p4@ZBTB16!0.30!0.98!ZBTB16;;chr12:57914700..57914737,+!p7@MBD6!0.30!0.98!MBD6;;chr13:41593392..41593403,-!p7@ELF1!0.30!0.98!ELF1;;chr2:157186741..157186759,-!p25@NR4A2!0.30!0.98!NR4A2;;chr2:157189298..157189305,-!p23@NR4A2!0.30!0.98!NR4A2;;chr2:157189317..157189325,-!p8@NR4A2!0.30!0.98!NR4A2;;chr2:214016899..214016926,-!p10@IKZF2!0.30!0.98!IKZF2;;chr2:214017053..214017065,-!p16@IKZF2!0.30!0.98!IKZF2;;chr2:242556880..242556899,-!p5@THAP4!0.30!0.98!THAP4;;chr2:242556900..242556916,-!p6@THAP4!0.30!0.98!THAP4;;chr3:101546889..101546895,+!p6@NFKBIZ!0.30!0.98!NFKBIZ;;chr3:101546918..101546929,+!p4@NFKBIZ!0.30!0.98!NFKBIZ;;chr3:18463329..18463336,-!p15@SATB1!0.30!0.98!SATB1;;chr3:18480192..18480198,-!p22@SATB1!0.30!0.98!SATB1;;chr3:18486740..18486760,-!p10@SATB1!0.30!0.98!SATB1;;chr3:71179687..71179696,-!p54@FOXP1!0.30!0.98!FOXP1;;chr3:71355138..71355149,-!p41@FOXP1!0.30!0.98!FOXP1;;chr4:109087991..109087996,-!p50@LEF1!0.30!0.98!LEF1;;chr4:109089050..109089067,-!p26@LEF1!0.30!0.98!LEF1;;chr4:109089095..109089144,-!p6@LEF1!0.30!0.98!LEF1;;chr4:109089515..109089523,-!p31@LEF1!0.30!0.98!LEF1;;chr4:109089820..109089825,-!p35@LEF1!0.30!0.98!LEF1;;chr4:149363662..149363688,-!p6@NR3C2!0.30!0.98!NR3C2;; | |expression_enrichment_score=chrX:49121165..49121179,-!p1@FOXP3!2.23!167.85!FOXP3;;chr3:71355163..71355209,-!p5@FOXP1!2.17!199.46!FOXP1;;chr3:63953435..63953499,+!p1@ATXN7!2.01!100.71!ATXN7;;chr19:54058073..54058088,+!p1@ZNF331!1.94!86.37!ZNF331;;chr4:109087445..109087463,-!p1@LEF1!1.90!77.90!LEF1;;chr19:16435625..16435682,+!p1@KLF2!1.82!1938.59!KLF2;;chr4:109090075..109090095,-!p2@LEF1!1.82!65.51!LEF1;;chr6:91006518..91006570,-!p1@BACH2!1.81!143.08!BACH2;;chr5:133451294..133451310,+!p2@TCF7!1.79!60.30!TCF7;;chr7:50343634..50343717,+!p2@IKZF1!1.78!58.99!IKZF1;;chr19:54041669..54041697,+!p2@ZNF331!1.77!58.34!ZNF331;;chr10:35484053..35484076,+!p1@CREM!1.76!137.54!CREM;;chr1:25256756..25256774,-!p1@RUNX3!1.75!100.38!RUNX3;;chrX:106960285..106960299,-!p1@TSC22D3!1.72!1302.71!TSC22D3;;chr2:157189180..157189290,-!p1@NR4A2!1.72!257.80!NR4A2;;chr3:71542615..71542644,-!p12@FOXP1!1.72!51.50!FOXP1;;chr19:19779619..19779670,+!p1@ZNF101!1.71!137.21!ZNF101;;chrY:21906594..21906622,-!p1@KDM5D!1.64!42.70!KDM5D;;chr5:133450365..133450444,+!p1@TCF7!1.58!162.31!TCF7;;chr10:35416142..35416169,+!p3@CREM!1.57!93.87!CREM;;chr2:231090433..231090469,+!p1@SP140!1.56!35.20!SP140;;chr19:12902289..12902307,+!p1@JUNB!1.52!6958.44!JUNB;;chr3:18486354..18486377,-!p2@SATB1!1.52!40.09!SATB1;;chr4:109089901..109089930,-!p3@LEF1!1.49!29.98!LEF1;;chr17:37934365..37934387,-!p2@IKZF3!1.49!29.98!IKZF3;;chr6:391743..391759,+!p1@IRF4!1.49!29.98!IRF4;;chr2:100759037..100759058,-!p2@AFF3!1.48!29.01!AFF3;;chr2:97202991..97203043,+!p3@ARID5A!1.45!27.38!ARID5A;;chr17:38497662..38497713,+!p4@RARA!1.43!30.31!RARA;;chr2:100759010..100759035,-!p1@AFF3!1.42!25.10!AFF3;;chr11:128392273..128392308,-!p2@ETS1!1.41!100.71!ETS1;;chr3:71353892..71353928,-!p31@FOXP1!1.41!24.77!FOXP1;;chr14:64971288..64971316,-!p2@ZBTB25!1.39!70.40!ZBTB25;;chr7:50343895..50343936,+!p5@IKZF1!1.39!23.79!IKZF1;;chr9:117150254..117150271,-!p1@AKNA!1.38!61.60!AKNA;;chr10:35416172..35416184,+!p13@CREM!1.38!23.14!CREM;;chr10:35484090..35484104,+!p6@CREM!1.38!23.14!CREM;;chr5:133451347..133451358,+!p3@TCF7!1.37!22.49!TCF7;;chr9:3525727..3525828,-!p2@RFX3!1.36!55.08!RFX3;;chr8:123793988..123794016,+!p1@ZHX2!1.33!35.85!ZHX2;;chr2:192015701..192015743,-!p1@STAT4!1.32!27.05!STAT4;;chr6:91006575..91006602,-!p2@BACH2!1.31!28.68!BACH2;;chr6:91006503..91006517,-!p3@BACH2!1.31!19.56!BACH2;;chr3:71542651..71542683,-!p22@FOXP1!1.31!19.56!FOXP1;;chr4:109089573..109089585,-!p8@LEF1!1.31!19.23!LEF1;;chr2:97202480..97202499,+!p1@ARID5A!1.29!180.89!ARID5A;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.29!102.67!ZNF10;;chr3:18480217..18480239,-!p3@SATB1!1.28!18.25!SATB1;;chr4:109088089..109088101,-!p11@LEF1!1.26!17.27!LEF1;;chr10:35416223..35416234,+!p12@CREM!1.26!17.27!CREM;;chr1:45805693..45805718,+!p3@TOE1!1.25!35.85!TOE1;;chr2:214017168..214017189,-!p8@IKZF2!1.25!16.95!IKZF2;;chr4:38665769..38665801,+!p2@KLF3!1.24!144.06!KLF3;;chr15:60884706..60884743,-!p1@RORA!1.24!83.76!RORA;;chr8:81397846..81397860,+!p3@ZBTB10!1.24!20.53!ZBTB10;;chr7:50344251..50344288,+!p3@IKZF1!1.24!16.30!IKZF1;;chr21:36421535..36421610,-!p2@RUNX1!1.23!56.38!RUNX1;;chr2:192015750..192015793,-!p2@STAT4!1.22!20.86!STAT4;;chr3:71542684..71542720,-!p18@FOXP1!1.22!15.64!FOXP1;;chr4:109088130..109088163,-!p13@LEF1!1.22!15.64!LEF1;;chr9:102584262..102584276,+!p1@NR4A3!1.20!32.92!NR4A3;;chr11:128392085..128392232,-!p1@ETS1!1.19!472.91!ETS1;;chr19:16435523..16435619,+!p2@KLF2!1.19!19.88!KLF2;;chr6:12009042..12009092,+!p6@HIVEP1!1.18!18.58!HIVEP1;;chr19:19779686..19779697,+!p3@ZNF101!1.18!16.62!ZNF101;;chr19:19729477..19729542,-!p1@PBX4!1.17!29.66!PBX4;;chr19:12444440..12444455,-!p1@ZNF563!1.17!24.12!ZNF563;;chr19:54041645..54041661,+!p5@ZNF331!1.17!13.69!ZNF331;;chr13:41240717..41240735,-!p2@FOXO1!1.16!90.28!FOXO1;;chr14:64970670..64970712,-!p3@ZBTB25!1.16!29.01!ZBTB25;;chr2:231090471..231090504,+!p2@SP140!1.16!13.36!SP140;;chr3:63898321..63898396,+!p3@ATXN7!1.14!29.01!ATXN7;;chr16:3313791..3313834,+!p2@ZNF263!1.14!28.68!ZNF263;;chr20:50159198..50159299,-!p1@NFATC2!1.14!18.90!NFATC2;;chr19:54040550..54040594,+!p20@ZNF331!1.14!12.71!ZNF331;;chr9:20620829..20620848,-!p7@MLLT3!1.14!12.71!MLLT3;;chr2:214016254..214016282,-!p7@IKZF2!1.13!12.39!IKZF2;;chr3:71542747..71542766,-!p34@FOXP1!1.13!12.39!FOXP1;;chr4:38665810..38665827,+!p1@KLF3!1.12!176.00!KLF3;;chr3:39195075..39195088,-!p1@CSRNP1!1.12!76.92!CSRNP1;;chr19:16435423..16435484,+!p5@KLF2!1.12!12.06!KLF2;;chr14:75745523..75745537,+!p1@FOS!1.11!1418.09!FOS;;chr9:20621927..20621996,-!p3@MLLT3!1.11!20.21!MLLT3;;chr14:75988771..75988826,+!p1@BATF!1.11!15.97!BATF;;chr12:72056800..72056834,+!p1@THAP2!1.11!15.97!THAP2;;chr13:41593425..41593480,-!p1@ELF1!1.10!73.33!ELF1;;chr18:3449330..3449344,+!p10@TGIF1!1.10!15.32!TGIF1;;chr8:81397876..81397898,+!p5@ZBTB10!1.09!13.36!ZBTB10;;chr9:20622444..20622468,-!p2@MLLT3!1.08!36.18!MLLT3;;chrX:101186981..101187030,-!p1@ZMAT1!1.07!35.20!ZMAT1;;chr17:38497715..38497734,+!p8@RARA!1.07!10.76!RARA;;chr8:81397820..81397836,+!p2@ZBTB10!1.06!13.04!ZBTB10;;chr10:35416125..35416138,+!p10@CREM!1.06!12.39!CREM;;chr2:214015343..214015366,-!p3@IKZF2!1.06!10.43!IKZF2;;chr4:109089996..109090012,-!p5@LEF1!1.05!10.10!LEF1;;chr17:56565257..56565283,-!p2@HSF5!1.05!10.10!HSF5;;chr10:35485013..35485034,+!p15@CREM!1.05!10.10!CREM;;chr19:45971246..45971265,+!p1@FOSB!1.04!187.08!FOSB;;chrX:106960221..106960236,-!p3@TSC22D3!1.04!28.03!TSC22D3;;chr18:77155922..77155939,+!p1@NFATC1!1.04!27.70!NFATC1;;chr9:114287433..114287513,+!p1@ZNF483!1.03!25.42!ZNF483;;chr3:23986824..23986848,+!p2@NR1D2!1.02!54.43!NR1D2;;chr19:52674696..52674758,-!p1@ZNF836!1.02!28.68!ZNF836;;chr8:60031619..60031676,-!p1@TOX!1.02!20.53!TOX;;chr4:109086281..109086319,-!p9@LEF1!1.02!9.45!LEF1;;chr12:57914286..57914304,-!p1@DDIT3!1.01!341.24!DDIT3;;chrX:106960180..106960197,-!p2@TSC22D3!1.01!35.53!TSC22D3;;chr3:71542827..71542838,-!p53@FOXP1!1.01!9.13!FOXP1;;chr20:56195474..56195506,-!p1@ZBP1!1.01!9.13!ZBP1;;chr14:99738138..99738163,-!p1@BCL11B!1.01!9.13!BCL11B;;chr13:41240737..41240787,-!p1@FOXO1!1.00!108.86!FOXO1;;chr2:208394817..208394834,+!p3@CREB1!1.00!36.83!CREB1;;chr15:60884747..60884774,-!p3@RORA!0.99!21.84!RORA;;chr13:74707894..74707947,-!p6@KLF12!0.99!9.78!KLF12;;chrY:2803415..2803468,+!p1@ZFY!0.99!8.80!ZFY;;chr4:109090054..109090073,-!p7@LEF1!0.99!8.80!LEF1;;chr5:142814241..142814278,-!p12@NR3C1!0.99!8.80!NR3C1;;chr19:19843900..19843928,-!p1@ZNF14!0.96!42.04!ZNF14;;chr9:102584241..102584261,+!p4@NR4A3!0.96!12.71!NR4A3;;chr6:106546808..106546833,+!p3@PRDM1!0.96!10.43!PRDM1;;chr12:56418637..56418648,+!p9@IKZF4!0.96!8.15!IKZF4;;chr19:18392422..18392440,-!p1@JUND!0.95!1128.99!JUND;;chr19:45972701..45972774,+!p2@FOSB!0.95!11.08!FOSB;;chr10:8096772..8096787,+!p2@GATA3!0.95!9.45!GATA3;;chr19:16435735..16435773,+!p4@KLF2!0.95!7.82!KLF2;;chr3:18487057..18487105,-!p4@SATB1!0.95!7.82!SATB1;;chr4:109088940..109089037,-!p4@LEF1!0.95!7.82!LEF1;;chr7:99097863..99097936,-!p1@ZNF394!0.94!80.18!ZNF394;;chr19:49140609..49140643,-!p1@DBP!0.94!44.65!DBP;;chr2:157198916..157198978,-!p2@NR4A2!0.94!28.03!NR4A2;;chr5:172483347..172483407,+!p1@C5orf41!0.93!58.99!CREBRF;;chr2:214015111..214015179,-!p1@IKZF2!0.93!13.69!IKZF2;;chr4:109086403..109086421,-!p19@LEF1!0.93!7.50!LEF1;;chr17:38020516..38020544,-!p5@IKZF3!0.93!7.50!IKZF3;;chr12:72056773..72056796,+!p3@THAP2!0.91!9.45!THAP2;;chr7:50344144..50344157,+!p6@IKZF1!0.91!7.17!IKZF1;;chr19:54041574..54041589,+!p6@ZNF331!0.91!7.17!ZNF331;;chr3:71179699..71179744,-!p2@FOXP1!0.90!54.10!FOXP1;;chr14:65569101..65569119,-!p3@MAX!0.90!23.14!MAX;;chr19:22235279..22235301,+!p1@ZNF257!0.90!13.36!ZNF257;;chr12:133706975..133707013,-!p3@ZNF891!0.90!9.45!ZNF891;;chr13:74708246..74708264,-!p8@KLF12!0.90!7.82!KLF12;;chr11:67007548..67007610,+!p3@KDM2A!0.89!52.80!KDM2A;;chr7:21467674..21467727,+!p1@SP4!0.89!28.36!SP4;;chr4:109087906..109087928,-!p12@LEF1!0.89!6.84!LEF1;;chr3:18466787..18466839,-!p1@SATB1!0.88!30.64!SATB1;;chr9:73028332..73028385,-!p3@KLF9!0.88!23.79!KLF9;;chr7:50344289..50344323,+!p1@IKZF1!0.88!6.52!IKZF1;;chr3:18480173..18480189,-!p6@SATB1!0.88!6.52!SATB1;;chr4:149363494..149363543,-!p1@NR3C2!0.88!6.52!NR3C2;;chr4:149365827..149365870,-!p5@NR3C2!0.88!6.52!NR3C2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.86!81.15!ZC3H12A;;chr10:104154246..104154347,+!p3@NFKB2!0.86!40.09!NFKB2;;chr9:3525867..3525902,-!p3@RFX3!0.86!22.49!RFX3;;chr19:12721790..12721810,+!p2@ZNF791!0.86!18.25!ZNF791;;chrY:21906761..21906810,-!p2@KDM5D!0.86!6.19!KDM5D;;chr10:135121763..135121783,+!p5@ZNF511!0.86!6.19!ZNF511;;chr2:214013461..214013517,-!p6@IKZF2!0.86!6.19!IKZF2;;chr4:109090106..109090124,-!p10@LEF1!0.86!6.19!LEF1;;chr6:106546834..106546850,+!p4@PRDM1!0.86!6.19!PRDM1;;chr7:50348268..50348366,+!p4@IKZF1!0.86!6.19!IKZF1;;chr3:101568349..101568365,+!p1@NFKBIZ!0.85!339.61!NFKBIZ;;chr4:140005443..140005527,-!p2@ELF2!0.85!38.13!ELF2;;chr1:91487836..91487854,-!p3@ZNF644!0.85!14.34!ZNF644;;chr9:32550839..32550962,-!p3@TOPORS!0.84!15.64!TOPORS;;chr19:38085768..38085821,+!p1@ZNF540!0.84!9.13!ZNF540;;chr7:104654718..104654741,+!p3@MLL5!0.84!8.80!MLL5;;chr2:231090344..231090361,-!p3@SP110!0.84!5.87!SP110;;chr19:54041603..54041615,+!p10@ZNF331!0.84!5.87!ZNF331;;chr19:9546177..9546224,-!p1@ZNF266!0.83!43.67!ZNF266;;chr13:74708029..74708077,-!p2@KLF12!0.83!17.27!KLF12;;chr10:8096631..8096660,+!p1@GATA3!0.83!7.17!GATA3;;chr19:9879350..9879419,-!p2@ZNF846!0.82!12.39!ZNF846;;chr19:12405606..12405629,-!p2@ZNF44!0.82!11.41!ZNF44;;chr7:50343864..50343888,+!p7@IKZF1!0.82!5.54!IKZF1;;chr19:38086030..38086048,-!p2@ZNF571!0.82!5.54!ZNF571;;chr14:64971893..64971928,-!p8@ZBTB25!0.82!5.54!ZBTB25;;chr2:43453734..43453751,-!p1@ZFP36L2!0.81!633.27!ZFP36L2;;chr7:104654690..104654704,+!p2@MLL5!0.81!11.41!MLL5;;chr17:36861735..36861755,+!p4@MLLT6!0.81!9.78!MLLT6;;chr10:3824332..3824425,-!p4@KLF6!0.81!9.13!KLF6;;chr7:127032330..127032356,-!p3@ZNF800!0.81!7.17!ZNF800;;chr14:69262947..69262986,-!p3@ZFP36L1!0.81!6.84!ZFP36L1;;chr14:90085458..90085557,-!p1@FOXN3!0.80!59.97!FOXN3;;chr2:61108695..61108753,+!p1@REL!0.80!39.76!REL;;chr16:88519669..88519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ID3B;;chr19:47615426..47615439,-!p5@ZC3H4!0.31!3.59!ZC3H4;;chr15:31619871..31619884,+!p8@KLF13!0.31!2.28!KLF13;;chr9:86593238..86593252,-!p3@HNRNPK!0.31!1.96!HNRPK;;chr12:12764917..12764931,+!p4@CREBL2!0.31!1.63!CREBL2;;chr19:9649253..9649265,-!p3@ZNF426!0.31!1.63!ZNF426;;chr21:30671145..30671156,+!p8@BACH1!0.31!1.30!BACH1;;chr9:125667739..125667770,-!p4@RC3H2!0.31!1.30!RC3H2;;chr10:3824229..3824253,-!p7@KLF6!0.31!1.30!KLF6;;chr12:57914481..57914509,+!p5@MBD6!0.31!1.30!MBD6;;chr2:28615716..28615733,+!p1@FOSL2!0.30!85.39!FOSL2;;chr5:16465902..16465917,-!p1@ZNF622!0.30!42.37!ZNF622;;chr1:59165724..59165751,-!p1@MYSM1!0.30!40.74!MYSM1;;chr7:6746529..6746591,-!p1@ZNF12!0.30!24.12!ZNF12;;chr11:130184753..130184824,-!p1@ZBTB44!0.30!24.12!ZBTB44;;chr19:9731872..9731915,-!p1@ZNF561!0.30!23.14!ZNF561;;chr16:68119250..68119293,+!p2@NFATC3!0.30!13.36!NFATC3;;chr17:7382935..7382961,-!p2@ZBTB4!0.30!10.43!ZBTB4;;chr19:45004556..45004581,-!p1@ZNF180!0.30!10.10!ZNF180;;chr5:178286925..178287007,+!p1@ZNF354B!0.30!9.78!ZNF354B;;chr19:58193338..58193386,+!p1@ZNF551,p2@ZNF776!0.30!8.15!ZNF551;;chr18:72922777..72922808,+!p2@TSHZ1!0.30!7.82!TSHZ1;;chr13:74708504..74708549,-!p1@KLF12!0.30!7.50!KLF12;;chr19:58331073..58331084,+!p3@ZNF587!0.30!6.19!ZNF587;;chr2:148778570..148778589,+!p4@MBD5!0.30!4.89!MBD5;;chr12:104532004..104532033,-!p4@NFYB!0.30!4.24!NFYB;;chr6:126102254..126102289,+!p5@NCOA7!0.30!4.24!NCOA7;;chr19:8942909..8942953,-!p2@ZNF558!0.30!3.59!ZNF558;;chr6:42419514..42419606,-!p1@TRERF1!0.30!3.26!TRERF1;;chr7:99070527..99070542,+!p2@ZNF789!0.30!3.26!ZNF789;;chr19:35417798..35417842,+!p1@ZNF30!0.30!2.28!ZNF30;;chr16:30569604..30569629,-!p3@ZNF764!0.30!1.96!ZNF764;;chr16:89787436..89787450,+!p4@ZNF276!0.30!1.63!ZNF276;;chr20:44600199..44600219,-!p3@ZNF335!0.30!1.63!ZNF335;;chr7:106826626..106826630,+!p3@HBP1!0.30!1.30!HBP1;;chr16:88752889..88752921,-!p1@SNAI3!0.30!1.30!SNAI3;;chr17:46622229..46622257,-!p6@HOXB2!0.30!1.30!HOXB2;;chr14:75747296..75747329,+!p4@FOS!0.30!0.98!FOS;;chr14:99737588..99737617,-!p4@BCL11B!0.30!0.98!BCL11B;;chr14:99738106..99738117,-!p9@BCL11B!0.30!0.98!BCL11B;;chr17:37934188..37934202,-!p8@IKZF3!0.30!0.98!IKZF3;;chr17:37934268..37934277,-!p10@IKZF3!0.30!0.98!IKZF3;;chr17:37934392..37934398,-!p11@IKZF3!0.30!0.98!IKZF3;;chr17:41738684..41738704,-!p2@MEOX1!0.30!0.98!MEOX1;;chr18:46477549..46477578,-!p7@SMAD7!0.30!0.98!SMAD7;;chr19:36204309..36204335,+!p1@ZBTB32!0.30!0.98!ZBTB32;;chr1:61542891..61542920,+!p12@NFIA!0.30!0.98!NFIA;;chr1:8586084..8586100,-!p20@RERE!0.30!0.98!RERE;;chr21:36421401..36421414,-!p16@RUNX1!0.30!0.98!RUNX1;;chr10:135121790..135121801,+!p7@ZNF511!0.30!0.98!ZNF511;;chr10:3823938..3823954,-!p13@KLF6!0.30!0.98!KLF6;;chr10:3824206..3824226,-!p10@KLF6!0.30!0.98!KLF6;;chr10:3824309..3824321,-!p15@KLF6!0.30!0.98!KLF6;;chr11:113930477..113930488,+!p4@ZBTB16!0.30!0.98!ZBTB16;;chr12:57914700..57914737,+!p7@MBD6!0.30!0.98!MBD6;;chr13:41593392..41593403,-!p7@ELF1!0.30!0.98!ELF1;;chr2:157186741..157186759,-!p25@NR4A2!0.30!0.98!NR4A2;;chr2:157189298..157189305,-!p23@NR4A2!0.30!0.98!NR4A2;;chr2:157189317..157189325,-!p8@NR4A2!0.30!0.98!NR4A2;;chr2:214016899..214016926,-!p10@IKZF2!0.30!0.98!IKZF2;;chr2:214017053..214017065,-!p16@IKZF2!0.30!0.98!IKZF2;;chr2:242556880..242556899,-!p5@THAP4!0.30!0.98!THAP4;;chr2:242556900..242556916,-!p6@THAP4!0.30!0.98!THAP4;;chr3:101546889..101546895,+!p6@NFKBIZ!0.30!0.98!NFKBIZ;;chr3:101546918..101546929,+!p4@NFKBIZ!0.30!0.98!NFKBIZ;;chr3:18463329..18463336,-!p15@SATB1!0.30!0.98!SATB1;;chr3:18480192..18480198,-!p22@SATB1!0.30!0.98!SATB1;;chr3:18486740..18486760,-!p10@SATB1!0.30!0.98!SATB1;;chr3:71179687..71179696,-!p54@FOXP1!0.30!0.98!FOXP1;;chr3:71355138..71355149,-!p41@FOXP1!0.30!0.98!FOXP1;;chr4:109087991..109087996,-!p50@LEF1!0.30!0.98!LEF1;;chr4:109089050..109089067,-!p26@LEF1!0.30!0.98!LEF1;;chr4:109089095..109089144,-!p6@LEF1!0.30!0.98!LEF1;;chr4:109089515..109089523,-!p31@LEF1!0.30!0.98!LEF1;;chr4:109089820..109089825,-!p35@LEF1!0.30!0.98!LEF1;;chr4:149363662..149363688,-!p6@NR3C2!0.30!0.98!NR3C2;; | ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988 | |||
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 36: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor1.CNhs13238.11780-124A7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor1.CNhs13238.11780-124A7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor1.CNhs13238.11780-124A7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor1.CNhs13238.11780-124A7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD4%252bCD25%252bCD45RA%252b%2520naive%2520regulatory%2520T%2520cells%252c%2520donor1.CNhs13238.11780-124A7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11780-124A7 | |id=FF:11780-124A7 | ||
|is_a=CL:0002677;;EFO:0002091;;FF:0000002;;FF:0000210 | |is_a=CL:0002677;;EFO:0002091;;FF:0000002;;FF:0000210 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs13238 | |||
|library_id_phase_based=2:CNhs13238 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11780 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11780 | |||
|name=CD4+CD25+CD45RA+ naive regulatory T cells, donor1 | |name=CD4+CD25+CD45RA+ naive regulatory T cells, donor1 | ||
|namespace= | |namespace= | ||
Line 44: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13238,LSID1006,release012,COMPLETED | |profile_hcage=CNhs13238,LSID1006,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0.122518063916678,0,0,0,0,0,0.0576511403063328,0.296175082262729,-0.277362132193514,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0.122518063916678,0.0245601676486207,0,0,0.337679311184155,0,0,0,0,0,0,0,0,0,0,0.122518063916678,0,-0.124389937853901,0,0,0,0,0,0,0,0,0.12387252001853,0,0,0,0,0,-0.0376577258467203,0,-0.0969923612426051,0,0,0.0251744367035812,0,0,0,0,0,0,0,0,0.122518063916678,0,0.629330344988799,0,0,0.122518063916678,0,0,0,0,0,0,0,0,0,-0.0149890113724371,-0.0468029507803901,0,0,0,-0.0584468268118252,0.119479131275972,0,0,0.061259031958339,0,0.198139731025023,0.04273472976023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.175213663176675,-0.484029634570929,0,0,0,0,0,0 | |||
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| |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 59: | Line 79: | ||
|rna_weight_ug=0.9014 | |rna_weight_ug=0.9014 | ||
|sample_age=25 | |sample_age=25 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 80: | Line 101: | ||
|top_motifs=PAX3,7:3.94179005963;CREB1:3.54504173135;FOX{D1,D2}:3.05735576468;ATF4:2.84688859586;TLX2:2.78972411509;FOXO1,3,4:2.69688914624;ATF5_CREB3:2.58729912772;FOX{F1,F2,J1}:2.54065566135;BPTF:2.53274585007;RUNX1..3:2.49453431394;ELF1,2,4:2.32145000166;ELK1,4_GABP{A,B1}:2.0226157355;HIF1A:2.021996272;FOXN1:1.90625075121;PDX1:1.90567679946;ETS1,2:1.86433395804;DMAP1_NCOR{1,2}_SMARC:1.84489750261;HMX1:1.76084149385;PBX1:1.70107771169;ATF2:1.67422418805;RORA:1.56933241087;RFX2..5_RFXANK_RFXAP:1.54678521909;PAX6:1.53598798672;JUN:1.50098690866;CDX1,2,4:1.4564407069;PAX2:1.42662291107;FOX{I1,J2}:1.38821133327;LEF1_TCF7_TCF7L1,2:1.34913932952;ATF6:1.27354866456;SPI1:1.25920499594;BREu{core}:1.00074735062;STAT1,3:0.967532216247;T:0.935776785226;SOX2:0.902244990473;TGIF1:0.867063138919;IRF1,2:0.853640031607;ZBTB16:0.853353381424;AHR_ARNT_ARNT2:0.81080611433;RFX1:0.795846538481;SPIB:0.793418077534;SPZ1:0.782394701807;ZEB1:0.770324956744;GATA6:0.702816594686;NFATC1..3:0.662482744609;NKX6-1,2:0.655489878114;CRX:0.595009634733;YY1:0.520745802649;AR:0.49775784643;POU1F1:0.496677033846;NANOG{mouse}:0.484531420711;SNAI1..3:0.470187451971;CUX2:0.453596602565;NFKB1_REL_RELA:0.45110871117;MAFB:0.393498417331;SOX5:0.380375049002;EP300:0.366932588024;NRF1:0.358114930701;NFIX:0.343762199841;NKX3-1:0.340742916623;NFIL3:0.319085540914;HAND1,2:0.317475282693;IKZF2:0.299337186472;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.296026753226;FOXQ1:0.287387980427;POU2F1..3:0.269349258947;SREBF1,2:0.267068825952;IRF7:0.251143825012;HES1:0.249877475881;TBX4,5:0.244655074482;NKX2-1,4:0.232340327133;FOXP1:0.225628835474;HOX{A6,A7,B6,B7}:0.210521803746;LMO2:0.207148362027;NANOG:0.162459350177;MYOD1:0.118676478556;PAX4:0.115827952175;MYB:0.0778193374898;NFY{A,B,C}:0.0550649668606;FOXA2:0.0322574911481;VSX1,2:0.023348754959;ALX1:-0.0238724575745;NR5A1,2:-0.0373235732458;AIRE:-0.0848632792325;HBP1_HMGB_SSRP1_UBTF:-0.0870169073085;NKX2-2,8:-0.0976348771784;ZNF143:-0.126179623262;EGR1..3:-0.135095270652;TAL1_TCF{3,4,12}:-0.15174080466;FOSL2:-0.188245637535;PITX1..3:-0.219928260238;NFE2L1:-0.236254979313;RBPJ:-0.236680546477;E2F1..5:-0.247156649749;HLF:-0.274006129712;OCT4_SOX2{dimer}:-0.274065557886;ALX4:-0.365073808061;HNF4A_NR2F1,2:-0.365159703742;PAX5:-0.374194225104;SMAD1..7,9:-0.413184419745;HNF1A:-0.420094737775;STAT2,4,6:-0.481645278184;ZNF384:-0.483494746626;FOS_FOS{B,L1}_JUN{B,D}:-0.502405787692;NHLH1,2:-0.51274605626;PRRX1,2:-0.528370080791;EVI1:-0.53369130597;STAT5{A,B}:-0.543087795273;ADNP_IRX_SIX_ZHX:-0.55502161608;GFI1:-0.562720667224;CEBPA,B_DDIT3:-0.589522329271;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.614237026438;FOXP3:-0.642919063554;MYFfamily:-0.652895056702;RREB1:-0.655819560842;PPARG:-0.671935993017;MEF2{A,B,C,D}:-0.676301283735;GCM1,2:-0.687562175175;DBP:-0.69777525856;BACH2:-0.699009534333;GLI1..3:-0.756066684711;ONECUT1,2:-0.765260051007;NFE2:-0.783460477305;MTF1:-0.799007903222;MED-1{core}:-0.825054176104;ZFP161:-0.832217612859;GFI1B:-0.838471282647;bHLH_family:-0.867539024755;SOX{8,9,10}:-0.871432681271;FOXD3:-0.893669094097;ZNF148:-0.923845766407;SOX17:-0.925262864648;HMGA1,2:-0.944400707297;ARID5B:-0.96193204363;SRF:-0.976400364752;LHX3,4:-1.03414396279;TOPORS:-1.08449752615;MTE{core}:-1.09297696215;POU3F1..4:-1.10325428524;SP1:-1.10838931527;PRDM1:-1.15132586678;REST:-1.15521846498;ZBTB6:-1.17421315887;RXRA_VDR{dimer}:-1.17520810995;GATA4:-1.20059083548;NR6A1:-1.22354931286;PATZ1:-1.22566084029;ZNF238:-1.24387570051;PAX8:-1.24725535519;MZF1:-1.25129866317;NR1H4:-1.27612631613;ZNF423:-1.30144453649;UFEwm:-1.31371558688;XCPE1{core}:-1.34043409564;FOXL1:-1.34828898517;MYBL2:-1.35442168356;FOXM1:-1.37248412022;NR3C1:-1.39052748731;TP53:-1.41469424805;HOX{A5,B5}:-1.43931739586;TFAP4:-1.44918711899;XBP1:-1.45015051352;POU5F1:-1.46112134938;MAZ:-1.474228093;TBP:-1.48398238058;NFE2L2:-1.48411895528;NKX2-3_NKX2-5:-1.4849256945;TFCP2:-1.58584168053;GTF2A1,2:-1.60215225426;ESR1:-1.61880383931;RXR{A,B,G}:-1.62437889676;TEAD1:-1.65231824115;EBF1:-1.65415917472;TFAP2B:-1.65923354402;ESRRA:-1.66639353537;HIC1:-1.68937786066;EN1,2:-1.70184126911;GTF2I:-1.7050117355;HOXA9_MEIS1:-1.73048504376;TFDP1:-1.75828272637;HOX{A4,D4}:-1.79732980138;KLF4:-1.80127142513;POU6F1:-1.83645339128;CDC5L:-1.89265018819;TLX1..3_NFIC{dimer}:-1.91829277707;TFAP2{A,C}:-1.93675025689;GZF1:-2.05119633814;ZIC1..3:-2.07775888651;HSF1,2:-2.08517693476;TEF:-2.31224866997;NKX3-2:-2.36363675743;PAX1,9:-2.40152551012;IKZF1:-3.14574734465 | |top_motifs=PAX3,7:3.94179005963;CREB1:3.54504173135;FOX{D1,D2}:3.05735576468;ATF4:2.84688859586;TLX2:2.78972411509;FOXO1,3,4:2.69688914624;ATF5_CREB3:2.58729912772;FOX{F1,F2,J1}:2.54065566135;BPTF:2.53274585007;RUNX1..3:2.49453431394;ELF1,2,4:2.32145000166;ELK1,4_GABP{A,B1}:2.0226157355;HIF1A:2.021996272;FOXN1:1.90625075121;PDX1:1.90567679946;ETS1,2:1.86433395804;DMAP1_NCOR{1,2}_SMARC:1.84489750261;HMX1:1.76084149385;PBX1:1.70107771169;ATF2:1.67422418805;RORA:1.56933241087;RFX2..5_RFXANK_RFXAP:1.54678521909;PAX6:1.53598798672;JUN:1.50098690866;CDX1,2,4:1.4564407069;PAX2:1.42662291107;FOX{I1,J2}:1.38821133327;LEF1_TCF7_TCF7L1,2:1.34913932952;ATF6:1.27354866456;SPI1:1.25920499594;BREu{core}:1.00074735062;STAT1,3:0.967532216247;T:0.935776785226;SOX2:0.902244990473;TGIF1:0.867063138919;IRF1,2:0.853640031607;ZBTB16:0.853353381424;AHR_ARNT_ARNT2:0.81080611433;RFX1:0.795846538481;SPIB:0.793418077534;SPZ1:0.782394701807;ZEB1:0.770324956744;GATA6:0.702816594686;NFATC1..3:0.662482744609;NKX6-1,2:0.655489878114;CRX:0.595009634733;YY1:0.520745802649;AR:0.49775784643;POU1F1:0.496677033846;NANOG{mouse}:0.484531420711;SNAI1..3:0.470187451971;CUX2:0.453596602565;NFKB1_REL_RELA:0.45110871117;MAFB:0.393498417331;SOX5:0.380375049002;EP300:0.366932588024;NRF1:0.358114930701;NFIX:0.343762199841;NKX3-1:0.340742916623;NFIL3:0.319085540914;HAND1,2:0.317475282693;IKZF2:0.299337186472;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.296026753226;FOXQ1:0.287387980427;POU2F1..3:0.269349258947;SREBF1,2:0.267068825952;IRF7:0.251143825012;HES1:0.249877475881;TBX4,5:0.244655074482;NKX2-1,4:0.232340327133;FOXP1:0.225628835474;HOX{A6,A7,B6,B7}:0.210521803746;LMO2:0.207148362027;NANOG:0.162459350177;MYOD1:0.118676478556;PAX4:0.115827952175;MYB:0.0778193374898;NFY{A,B,C}:0.0550649668606;FOXA2:0.0322574911481;VSX1,2:0.023348754959;ALX1:-0.0238724575745;NR5A1,2:-0.0373235732458;AIRE:-0.0848632792325;HBP1_HMGB_SSRP1_UBTF:-0.0870169073085;NKX2-2,8:-0.0976348771784;ZNF143:-0.126179623262;EGR1..3:-0.135095270652;TAL1_TCF{3,4,12}:-0.15174080466;FOSL2:-0.188245637535;PITX1..3:-0.219928260238;NFE2L1:-0.236254979313;RBPJ:-0.236680546477;E2F1..5:-0.247156649749;HLF:-0.274006129712;OCT4_SOX2{dimer}:-0.274065557886;ALX4:-0.365073808061;HNF4A_NR2F1,2:-0.365159703742;PAX5:-0.374194225104;SMAD1..7,9:-0.413184419745;HNF1A:-0.420094737775;STAT2,4,6:-0.481645278184;ZNF384:-0.483494746626;FOS_FOS{B,L1}_JUN{B,D}:-0.502405787692;NHLH1,2:-0.51274605626;PRRX1,2:-0.528370080791;EVI1:-0.53369130597;STAT5{A,B}:-0.543087795273;ADNP_IRX_SIX_ZHX:-0.55502161608;GFI1:-0.562720667224;CEBPA,B_DDIT3:-0.589522329271;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.614237026438;FOXP3:-0.642919063554;MYFfamily:-0.652895056702;RREB1:-0.655819560842;PPARG:-0.671935993017;MEF2{A,B,C,D}:-0.676301283735;GCM1,2:-0.687562175175;DBP:-0.69777525856;BACH2:-0.699009534333;GLI1..3:-0.756066684711;ONECUT1,2:-0.765260051007;NFE2:-0.783460477305;MTF1:-0.799007903222;MED-1{core}:-0.825054176104;ZFP161:-0.832217612859;GFI1B:-0.838471282647;bHLH_family:-0.867539024755;SOX{8,9,10}:-0.871432681271;FOXD3:-0.893669094097;ZNF148:-0.923845766407;SOX17:-0.925262864648;HMGA1,2:-0.944400707297;ARID5B:-0.96193204363;SRF:-0.976400364752;LHX3,4:-1.03414396279;TOPORS:-1.08449752615;MTE{core}:-1.09297696215;POU3F1..4:-1.10325428524;SP1:-1.10838931527;PRDM1:-1.15132586678;REST:-1.15521846498;ZBTB6:-1.17421315887;RXRA_VDR{dimer}:-1.17520810995;GATA4:-1.20059083548;NR6A1:-1.22354931286;PATZ1:-1.22566084029;ZNF238:-1.24387570051;PAX8:-1.24725535519;MZF1:-1.25129866317;NR1H4:-1.27612631613;ZNF423:-1.30144453649;UFEwm:-1.31371558688;XCPE1{core}:-1.34043409564;FOXL1:-1.34828898517;MYBL2:-1.35442168356;FOXM1:-1.37248412022;NR3C1:-1.39052748731;TP53:-1.41469424805;HOX{A5,B5}:-1.43931739586;TFAP4:-1.44918711899;XBP1:-1.45015051352;POU5F1:-1.46112134938;MAZ:-1.474228093;TBP:-1.48398238058;NFE2L2:-1.48411895528;NKX2-3_NKX2-5:-1.4849256945;TFCP2:-1.58584168053;GTF2A1,2:-1.60215225426;ESR1:-1.61880383931;RXR{A,B,G}:-1.62437889676;TEAD1:-1.65231824115;EBF1:-1.65415917472;TFAP2B:-1.65923354402;ESRRA:-1.66639353537;HIC1:-1.68937786066;EN1,2:-1.70184126911;GTF2I:-1.7050117355;HOXA9_MEIS1:-1.73048504376;TFDP1:-1.75828272637;HOX{A4,D4}:-1.79732980138;KLF4:-1.80127142513;POU6F1:-1.83645339128;CDC5L:-1.89265018819;TLX1..3_NFIC{dimer}:-1.91829277707;TFAP2{A,C}:-1.93675025689;GZF1:-2.05119633814;ZIC1..3:-2.07775888651;HSF1,2:-2.08517693476;TEF:-2.31224866997;NKX3-2:-2.36363675743;PAX1,9:-2.40152551012;IKZF1:-3.14574734465 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11780-124A7;search_select_hide=table117:FF:11780-124A7 | |||
}} | }} |
Latest revision as of 18:19, 4 June 2020
Name: | CD4+CD25+CD45RA+ naive regulatory T cells, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13238 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13238
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13238
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.699 |
10 | 10 | 0.0238 |
100 | 100 | 0.615 |
101 | 101 | 0.488 |
102 | 102 | 0.654 |
103 | 103 | 0.873 |
104 | 104 | 0.866 |
105 | 105 | 0.371 |
106 | 106 | 0.705 |
107 | 107 | 1.49079e-4 |
108 | 108 | 0.391 |
109 | 109 | 0.278 |
11 | 11 | 0.511 |
110 | 110 | 0.853 |
111 | 111 | 0.873 |
112 | 112 | 0.974 |
113 | 113 | 0.694 |
114 | 114 | 0.997 |
115 | 115 | 0.359 |
116 | 116 | 0.0613 |
117 | 117 | 0.00361 |
118 | 118 | 0.352 |
119 | 119 | 0.0766 |
12 | 12 | 0.826 |
120 | 120 | 0.954 |
121 | 121 | 0.805 |
122 | 122 | 0.567 |
123 | 123 | 0.0281 |
124 | 124 | 0.71 |
125 | 125 | 0.224 |
126 | 126 | 0.914 |
127 | 127 | 0.982 |
128 | 128 | 0.0988 |
129 | 129 | 0.886 |
13 | 13 | 0.543 |
130 | 130 | 0.543 |
131 | 131 | 0.256 |
132 | 132 | 0.296 |
133 | 133 | 0.965 |
134 | 134 | 0.843 |
135 | 135 | 0.912 |
136 | 136 | 0.755 |
137 | 137 | 0.0492 |
138 | 138 | 0.445 |
139 | 139 | 0.198 |
14 | 14 | 0.764 |
140 | 140 | 0.27 |
141 | 141 | 0.642 |
142 | 142 | 0.54 |
143 | 143 | 0.0101 |
144 | 144 | 0.813 |
145 | 145 | 0.308 |
146 | 146 | 0.792 |
147 | 147 | 0.0197 |
148 | 148 | 0.659 |
149 | 149 | 0.41 |
15 | 15 | 0.401 |
150 | 150 | 0.861 |
151 | 151 | 0.902 |
152 | 152 | 0.241 |
153 | 153 | 0.871 |
154 | 154 | 0.553 |
155 | 155 | 0.0107 |
156 | 156 | 0.911 |
157 | 157 | 0.54 |
158 | 158 | 0.00486 |
159 | 159 | 0.589 |
16 | 16 | 0.373 |
160 | 160 | 0.13 |
161 | 161 | 0.788 |
162 | 162 | 0.00676 |
163 | 163 | 0.666 |
164 | 164 | 0.111 |
165 | 165 | 0.874 |
166 | 166 | 0.214 |
167 | 167 | 0.0838 |
168 | 168 | 0.88 |
169 | 169 | 0.0921 |
17 | 17 | 0.519 |
18 | 18 | 0.686 |
19 | 19 | 0.0429 |
2 | 2 | 0.226 |
20 | 20 | 0.296 |
21 | 21 | 0.841 |
22 | 22 | 0.374 |
23 | 23 | 0.27 |
24 | 24 | 0.646 |
25 | 25 | 0.101 |
26 | 26 | 0.961 |
27 | 27 | 0.806 |
28 | 28 | 0.581 |
29 | 29 | 0.0323 |
3 | 3 | 0.462 |
30 | 30 | 0.156 |
31 | 31 | 0.616 |
32 | 32 | 0.0273 |
33 | 33 | 0.126 |
34 | 34 | 0.339 |
35 | 35 | 0.475 |
36 | 36 | 0.0354 |
37 | 37 | 0.572 |
38 | 38 | 0.767 |
39 | 39 | 0.178 |
4 | 4 | 0.775 |
40 | 40 | 0.814 |
41 | 41 | 0.0803 |
42 | 42 | 0.253 |
43 | 43 | 0.733 |
44 | 44 | 0.977 |
45 | 45 | 0.188 |
46 | 46 | 0.84 |
47 | 47 | 0.36 |
48 | 48 | 0.682 |
49 | 49 | 0.322 |
5 | 5 | 0.666 |
50 | 50 | 0.513 |
51 | 51 | 0.969 |
52 | 52 | 0.273 |
53 | 53 | 0.678 |
54 | 54 | 0.834 |
55 | 55 | 0.829 |
56 | 56 | 0.747 |
57 | 57 | 0.756 |
58 | 58 | 0.18 |
59 | 59 | 0.518 |
6 | 6 | 0.692 |
60 | 60 | 0.9 |
61 | 61 | 0.0885 |
62 | 62 | 0.287 |
63 | 63 | 0.765 |
64 | 64 | 0.695 |
65 | 65 | 0.629 |
66 | 66 | 0.927 |
67 | 67 | 0.841 |
68 | 68 | 0.483 |
69 | 69 | 0.956 |
7 | 7 | 0.466 |
70 | 70 | 0.271 |
71 | 71 | 0.209 |
72 | 72 | 0.12 |
73 | 73 | 0.915 |
74 | 74 | 0.69 |
75 | 75 | 0.00675 |
76 | 76 | 0.0498 |
77 | 77 | 0.00563 |
78 | 78 | 0.358 |
79 | 79 | 0.345 |
8 | 8 | 0.346 |
80 | 80 | 0.0205 |
81 | 81 | 0.674 |
82 | 82 | 0.432 |
83 | 83 | 0.99 |
84 | 84 | 0.613 |
85 | 85 | 0.226 |
86 | 86 | 0.2 |
87 | 87 | 0.826 |
88 | 88 | 0.996 |
89 | 89 | 0.0403 |
9 | 9 | 0.909 |
90 | 90 | 0.188 |
91 | 91 | 0.962 |
92 | 92 | 0.666 |
93 | 93 | 0.849 |
94 | 94 | 0.312 |
95 | 95 | 0.0101 |
96 | 96 | 0.638 |
97 | 97 | 0.301 |
98 | 98 | 0.377 |
99 | 99 | 6.80335e-6 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13238
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
CL:0002677 naive regulatory T cell
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000624 (CD4-positive, alpha-beta T cell)
0000815 (regulatory T cell)
0000898 (naive T cell)
0000792 (CD4-positive, CD25-positive, alpha-beta regulatory T cell)
0002677 (naive regulatory T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)