FF:11795-124C4: Difference between revisions

Latest revision as of 18:20, 4 June 2020

Name:	CD4+CD25-CD45RA+ naive conventional T cells, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs13205
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	23
cell type	T cell
cell line	NA
company	NA
collaboration	Michael Rehli (University of Regensberg)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	19
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005585

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13205		CAGE		DRX008191		DRR009063

Accession ID Hg19

Library id		BAM		CTSS
CNhs13205		DRZ000488		DRZ001873

Accession ID Hg38

Library id		BAM		CTSS
CNhs13205		DRZ011838		DRZ013223

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.103
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.129
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.26
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.186
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.339
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.186
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.15
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.676
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.499
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.942
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.189
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.126
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.103
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.458
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.109
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.7
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.186
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.538
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.593
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.103
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.72
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.977
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.744
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.596
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.606
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.466
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.744
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.103
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.988
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.186
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13205

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.24458e-4
MA0003.1	MA0003.1	0.421
MA0004.1	MA0004.1	0.814
MA0006.1	MA0006.1	0.0933
MA0007.1	MA0007.1	0.91
MA0009.1	MA0009.1	0.471
MA0014.1	MA0014.1	0.489
MA0017.1	MA0017.1	0.931
MA0018.2	MA0018.2	1.24079e-5
MA0019.1	MA0019.1	0.635
MA0024.1	MA0024.1	0.476
MA0025.1	MA0025.1	0.955
MA0027.1	MA0027.1	0.798
MA0028.1	MA0028.1	7.94075e-6
MA0029.1	MA0029.1	0.367
MA0030.1	MA0030.1	0.0303
MA0031.1	MA0031.1	4.16603e-4
MA0035.2	MA0035.2	0.291
MA0038.1	MA0038.1	0.0676
MA0039.2	MA0039.2	0.739
MA0040.1	MA0040.1	0.384
MA0041.1	MA0041.1	0.304
MA0042.1	MA0042.1	0.835
MA0043.1	MA0043.1	0.242
MA0046.1	MA0046.1	0.428
MA0047.2	MA0047.2	0.132
MA0048.1	MA0048.1	0.724
MA0050.1	MA0050.1	2.38699e-4
MA0051.1	MA0051.1	0.0147
MA0052.1	MA0052.1	0.00756
MA0055.1	MA0055.1	0.909
MA0057.1	MA0057.1	0.55
MA0058.1	MA0058.1	0.836
MA0059.1	MA0059.1	0.667
MA0060.1	MA0060.1	0.182
MA0061.1	MA0061.1	0.434
MA0062.2	MA0062.2	1.88808e-17
MA0065.2	MA0065.2	0.354
MA0066.1	MA0066.1	0.877
MA0067.1	MA0067.1	0.189
MA0068.1	MA0068.1	0.939
MA0069.1	MA0069.1	0.9
MA0070.1	MA0070.1	0.562
MA0071.1	MA0071.1	0.886
MA0072.1	MA0072.1	0.644
MA0073.1	MA0073.1	0.943
MA0074.1	MA0074.1	0.353
MA0076.1	MA0076.1	5.66826e-9
MA0077.1	MA0077.1	0.0515
MA0078.1	MA0078.1	0.736
MA0079.2	MA0079.2	0.409
MA0080.2	MA0080.2	1.82871e-9
MA0081.1	MA0081.1	0.0167
MA0083.1	MA0083.1	0.00164
MA0084.1	MA0084.1	0.208
MA0087.1	MA0087.1	0.714
MA0088.1	MA0088.1	0.118
MA0090.1	MA0090.1	5.05082e-4
MA0091.1	MA0091.1	0.547
MA0092.1	MA0092.1	0.712
MA0093.1	MA0093.1	0.952
MA0099.2	MA0099.2	1.56356e-9
MA0100.1	MA0100.1	0.596
MA0101.1	MA0101.1	0.225
MA0102.2	MA0102.2	0.482
MA0103.1	MA0103.1	0.138
MA0104.2	MA0104.2	0.065
MA0105.1	MA0105.1	0.00943
MA0106.1	MA0106.1	0.14
MA0107.1	MA0107.1	0.124
MA0108.2	MA0108.2	1.21024e-12
MA0111.1	MA0111.1	0.169
MA0112.2	MA0112.2	0.746
MA0113.1	MA0113.1	0.656
MA0114.1	MA0114.1	0.999
MA0115.1	MA0115.1	0.859
MA0116.1	MA0116.1	0.00546
MA0117.1	MA0117.1	0.225
MA0119.1	MA0119.1	0.721
MA0122.1	MA0122.1	0.478
MA0124.1	MA0124.1	0.581
MA0125.1	MA0125.1	0.128
MA0131.1	MA0131.1	0.0575
MA0135.1	MA0135.1	0.183
MA0136.1	MA0136.1	7.79893e-21
MA0137.2	MA0137.2	0.831
MA0138.2	MA0138.2	0.212
MA0139.1	MA0139.1	0.1
MA0140.1	MA0140.1	0.252
MA0141.1	MA0141.1	0.302
MA0142.1	MA0142.1	0.0902
MA0143.1	MA0143.1	0.181
MA0144.1	MA0144.1	0.597
MA0145.1	MA0145.1	0.0446
MA0146.1	MA0146.1	0.69
MA0147.1	MA0147.1	0.0838
MA0148.1	MA0148.1	0.383
MA0149.1	MA0149.1	0.188
MA0150.1	MA0150.1	0.0294
MA0152.1	MA0152.1	0.00584
MA0153.1	MA0153.1	0.612
MA0154.1	MA0154.1	0.42
MA0155.1	MA0155.1	0.297
MA0156.1	MA0156.1	1.93967e-19
MA0157.1	MA0157.1	3.38371e-4
MA0159.1	MA0159.1	0.541
MA0160.1	MA0160.1	0.515
MA0162.1	MA0162.1	0.308
MA0163.1	MA0163.1	4.20868e-6
MA0164.1	MA0164.1	0.942
MA0258.1	MA0258.1	0.766
MA0259.1	MA0259.1	0.118

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13205

Novel motif	Logo	P-value
1	1	0.432
10	10	0.0133
100	100	0.478
101	101	0.172
102	102	0.896
103	103	0.701
104	104	0.941
105	105	0.568
106	106	0.826
107	107	0.00296
108	108	0.4
109	109	0.311
11	11	0.3
110	110	0.947
111	111	0.528
112	112	0.85
113	113	0.427
114	114	0.507
115	115	0.112
116	116	0.331
117	117	0.002
118	118	0.281
119	119	0.233
12	12	0.708
120	120	0.873
121	121	0.848
122	122	0.936
123	123	4.11276e-5
124	124	0.403
125	125	0.78
126	126	0.801
127	127	0.84
128	128	0.535
129	129	0.556
13	13	0.644
130	130	0.366
131	131	0.287
132	132	0.568
133	133	0.533
134	134	0.411
135	135	0.923
136	136	0.729
137	137	0.0711
138	138	0.304
139	139	0.061
14	14	0.653
140	140	0.158
141	141	0.463
142	142	0.278
143	143	0.026
144	144	0.753
145	145	0.841
146	146	0.675
147	147	0.011
148	148	0.468
149	149	0.369
15	15	0.288
150	150	0.945
151	151	0.623
152	152	0.16
153	153	0.791
154	154	0.303
155	155	0.0271
156	156	0.909
157	157	0.324
158	158	0.0191
159	159	0.448
16	16	0.418
160	160	0.414
161	161	0.591
162	162	0.174
163	163	0.481
164	164	0.0935
165	165	0.657
166	166	0.481
167	167	0.0537
168	168	0.939
169	169	0.188
17	17	0.495
18	18	0.632
19	19	0.0686
2	2	0.345
20	20	0.426
21	21	0.533
22	22	0.348
23	23	0.207
24	24	0.636
25	25	0.0986
26	26	0.849
27	27	0.548
28	28	0.621
29	29	0.0221
3	3	0.143
30	30	0.0929
31	31	0.662
32	32	0.0214
33	33	0.218
34	34	0.321
35	35	0.139
36	36	0.0237
37	37	0.355
38	38	0.854
39	39	0.207
4	4	0.771
40	40	0.852
41	41	0.249
42	42	0.124
43	43	0.576
44	44	0.999
45	45	0.244
46	46	0.514
47	47	0.158
48	48	0.377
49	49	0.13
5	5	0.476
50	50	0.43
51	51	0.908
52	52	0.22
53	53	0.492
54	54	0.967
55	55	0.522
56	56	0.992
57	57	0.561
58	58	0.17
59	59	0.437
6	6	0.76
60	60	0.949
61	61	0.0721
62	62	0.2
63	63	0.916
64	64	0.587
65	65	0.558
66	66	0.64
67	67	0.74
68	68	0.414
69	69	0.986
7	7	0.462
70	70	0.035
71	71	0.147
72	72	0.173
73	73	0.715
74	74	0.593
75	75	0.0114
76	76	0.0721
77	77	0.0235
78	78	0.668
79	79	0.583
8	8	0.806
80	80	0.0325
81	81	0.314
82	82	0.251
83	83	0.766
84	84	0.618
85	85	0.377
86	86	0.314
87	87	0.648
88	88	0.942
89	89	0.0532
9	9	0.702
90	90	0.0267
91	91	0.621
92	92	0.897
93	93	0.72
94	94	0.294
95	95	0.3
96	96	0.391
97	97	0.358
98	98	0.199
99	99	0.00114

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13205

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005585
+|accession_numbers=CAGE;DRX008191;DRR009063;DRZ000488;DRZ001873;DRZ011838;DRZ013223
 |ancestors_in_anatomy_facet=
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
 |comment=Changed from previous label. TODO: full classification
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr4:109087445..109087463,-!p1@LEF1!2.40!250.42!LEF1;;chr5:133451294..133451310,+!p2@TCF7!2.38!238.65!TCF7;;chr3:63953435..63953499,+!p1@ATXN7!2.24!171.76!ATXN7;;chr3:71542615..71542644,-!p12@FOXP1!2.01!102.20!FOXP1;;chr7:50343634..50343717,+!p2@IKZF1!1.97!92.30!IKZF1;;chr3:71355163..71355209,-!p5@FOXP1!1.96!124.14!FOXP1;;chr5:133450365..133450444,+!p1@TCF7!1.91!348.07!TCF7;;chr6:91006518..91006570,-!p1@BACH2!1.85!156.51!BACH2;;chr4:109090075..109090095,-!p2@LEF1!1.81!64.21!LEF1;;chrY:21906594..21906622,-!p1@KDM5D!1.77!57.25!KDM5D;;chr2:192015701..192015743,-!p1@STAT4!1.73!71.97!STAT4;;chr5:133451347..133451358,+!p3@TCF7!1.73!52.44!TCF7;;chr3:18486354..18486377,-!p2@SATB1!1.71!62.07!SATB1;;chr2:231090433..231090469,+!p1@SP140!1.71!50.57!SP140;;chr6:91006575..91006602,-!p2@BACH2!1.69!69.83!BACH2;;chr2:192015750..192015793,-!p2@STAT4!1.68!62.60!STAT4;;chr19:16435625..16435682,+!p1@KLF2!1.66!1342.79!KLF2;;chr7:50344251..50344288,+!p3@IKZF1!1.65!43.88!IKZF1;;chr9:3525727..3525828,-!p2@RFX3!1.60!96.85!RFX3;;chr19:54058073..54058088,+!p1@ZNF331!1.60!38.79!ZNF331;;chrX:106960285..106960299,-!p1@TSC22D3!1.53!829.11!TSC22D3;;chr11:128392273..128392308,-!p2@ETS1!1.50!125.21!ETS1;;chr7:50343895..50343936,+!p5@IKZF1!1.50!30.50!IKZF1;;chr19:19779619..19779670,+!p1@ZNF101!1.49!80.80!ZNF101;;chr3:71542651..71542683,-!p22@FOXP1!1.48!29.43!FOXP1;;chr21:36421535..36421610,-!p2@RUNX1!1.47!99.53!RUNX1;;chr10:35484053..35484076,+!p1@CREM!1.45!66.35!CREM;;chr3:71542684..71542720,-!p18@FOXP1!1.45!27.29!FOXP1;;chr4:109089901..109089930,-!p3@LEF1!1.45!27.29!LEF1;;chr3:18480217..18480239,-!p3@SATB1!1.45!27.02!SATB1;;chr4:109089573..109089585,-!p8@LEF1!1.41!24.61!LEF1;;chr7:50344289..50344323,+!p1@IKZF1!1.41!24.61!IKZF1;;chr19:54041669..54041697,+!p2@ZNF331!1.40!24.35!ZNF331;;chr3:18487057..18487105,-!p4@SATB1!1.39!23.54!SATB1;;chr2:97202991..97203043,+!p3@ARID5A!1.39!23.28!ARID5A;;chr6:91006503..91006517,-!p3@BACH2!1.38!23.01!BACH2;;chr9:117150254..117150271,-!p1@AKNA!1.36!58.59!AKNA;;chr10:35416142..35416169,+!p3@CREM!1.36!56.99!CREM;;chr16:3313791..3313834,+!p2@ZNF263!1.35!46.55!ZNF263;;chr14:64970670..64970712,-!p3@ZBTB25!1.35!45.48!ZBTB25;;chr20:50159198..50159299,-!p1@NFATC2!1.35!31.03!NFATC2;;chr19:45971246..45971265,+!p1@FOSB!1.31!351.28!FOSB;;chr17:38497662..38497713,+!p4@RARA!1.29!21.67!RARA;;chr13:41593425..41593480,-!p1@ELF1!1.28!112.10!ELF1;;chr7:50348268..50348366,+!p4@IKZF1!1.28!18.19!IKZF1;;chr4:109086281..109086319,-!p9@LEF1!1.27!17.66!LEF1;;chr17:38020392..38020477,-!p1@IKZF3!1.26!17.12!IKZF3;;chr4:38665769..38665801,+!p2@KLF3!1.25!149.29!KLF3;;chr3:71353892..71353928,-!p31@FOXP1!1.25!16.59!FOXP1;;chr2:100759037..100759058,-!p2@AFF3!1.24!16.32!AFF3;;chr14:99738138..99738163,-!p1@BCL11B!1.23!16.05!BCL11B;;chr9:20620829..20620848,-!p7@MLLT3!1.23!16.05!MLLT3;;chr8:123793988..123794016,+!p1@ZHX2!1.22!27.56!ZHX2;;chr19:12902289..12902307,+!p1@JUNB!1.21!3398.30!JUNB;;chr10:8096772..8096787,+!p2@GATA3!1.21!18.19!GATA3;;chr2:100759010..100759035,-!p1@AFF3!1.21!15.25!AFF3;;chr11:128392085..128392232,-!p1@ETS1!1.20!490.40!ETS1;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!1.20!82.40!ZNF10;;chr6:391743..391759,+!p1@IRF4!1.20!14.71!IRF4;;chr2:157189180..157189290,-!p1@NR4A2!1.19!74.91!NR4A2;;chrX:101186981..101187030,-!p1@ZMAT1!1.18!46.02!ZMAT1;;chr10:8096631..8096660,+!p1@GATA3!1.18!17.12!GATA3;;chr15:60884706..60884743,-!p1@RORA!1.17!71.17!RORA;;chr3:114819124..114819200,-!p3@ZBTB20!1.17!32.10!ZBTB20;;chr19:45972701..45972774,+!p2@FOSB!1.17!19.00!FOSB;;chr17:56565257..56565283,-!p2@HSF5!1.16!13.38!HSF5;;chr19:54041645..54041661,+!p5@ZNF331!1.15!13.11!ZNF331;;chr1:25256756..25256774,-!p1@RUNX3!1.13!23.54!RUNX3;;chr2:231090471..231090504,+!p2@SP140!1.13!12.57!SP140;;chr14:64971288..64971316,-!p2@ZBTB25!1.12!37.72!ZBTB25;;chr9:114287433..114287513,+!p1@ZNF483!1.12!31.84!ZNF483;;chr19:38085768..38085821,+!p1@ZNF540!1.12!18.19!ZNF540;;chr6:12009042..12009092,+!p6@HIVEP1!1.12!16.05!HIVEP1;;chr17:38020516..38020544,-!p5@IKZF3!1.12!12.31!IKZF3;;chr4:109089996..109090012,-!p5@LEF1!1.12!12.31!LEF1;;chr13:41240717..41240735,-!p2@FOXO1!1.11!80.53!FOXO1;;chr1:45805693..45805718,+!p3@TOE1!1.10!25.15!TOE1;;chr16:68119324..68119364,+!p1@NFATC3!1.09!50.30!NFATC3;;chr2:97202480..97202499,+!p1@ARID5A!1.08!111.83!ARID5A;;chr7:21467674..21467727,+!p1@SP4!1.07!42.54!SP4;;chr4:109090106..109090124,-!p10@LEF1!1.07!10.70!LEF1;;chr19:12444440..12444455,-!p1@ZNF563!1.06!18.19!ZNF563;;chr4:109088940..109089037,-!p4@LEF1!1.06!10.43!LEF1;;chr11:67007548..67007610,+!p3@KDM2A!1.05!76.52!KDM2A;;chr3:18466787..18466839,-!p1@SATB1!1.05!46.82!SATB1;;chr8:81397846..81397860,+!p3@ZBTB10!1.04!12.57!ZBTB10;;chr22:21771656..21771662,+!p1@HIC2!1.04!9.90!HIC2;;chr4:109090054..109090073,-!p7@LEF1!1.03!9.63!LEF1;;chr4:149363494..149363543,-!p1@NR3C2!1.03!9.63!NR3C2;;chr3:18480173..18480189,-!p6@SATB1!1.02!9.36!SATB1;;chr3:71179699..71179744,-!p2@FOXP1!1.00!69.56!FOXP1;;chr13:74708246..74708264,-!p8@KLF12!1.00!10.17!KLF12;;chr17:37934365.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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg38.nobarcode.ctss.bed.gz
 |id=FF:11795-124C4
 |is_a=EFO:0002091;;FF:0000002;;FF:0000210
+|is_obsolete=
+|library_id=CNhs13205
+|library_id_phase_based=2:CNhs13205
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11795
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11795
 |name=CD4+CD25-CD45RA+ naive conventional T cells, donor2
 |namespace=
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs13205,LSID1004,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=124
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=1.2848
 |sample_age=23
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.2867485183338e-229!GO:0043227;membrane-bound organelle;9.20405209342131e-209!GO:0043231;intracellular membrane-bound organelle;2.02587044818302e-208!GO:0043226;organelle;9.00651438666447e-192!GO:0043229;intracellular organelle;2.49534416919298e-191!GO:0005634;nucleus;4.48081783724752e-121!GO:0005737;cytoplasm;2.06121059469533e-119!GO:0044422;organelle part;3.64726357644459e-109!GO:0043170;macromolecule metabolic process;1.61566428103924e-108!GO:0044446;intracellular organelle part;1.1884879700895e-107!GO:0044237;cellular metabolic process;8.55377373602931e-107!GO:0044238;primary metabolic process;3.1284246196012e-102!GO:0032991;macromolecular complex;2.58542669930966e-88!GO:0003723;RNA binding;2.84734364602808e-88!GO:0030529;ribonucleoprotein complex;1.97822831334703e-87!GO:0044428;nuclear part;1.91996769503982e-84!GO:0043283;biopolymer metabolic process;4.38779437121551e-81!GO:0044444;cytoplasmic part;2.13821403392538e-80!GO:0010467;gene expression;5.16024132258394e-76!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.2738955453418e-70!GO:0043233;organelle lumen;9.28079264580199e-69!GO:0031974;membrane-enclosed lumen;9.28079264580199e-69!GO:0006396;RNA processing;3.73361183558313e-60!GO:0003676;nucleic acid binding;1.9888808814519e-58!GO:0031981;nuclear lumen;9.53587023282199e-52!GO:0005739;mitochondrion;1.20048790519301e-51!GO:0006412;translation;1.78042357825315e-48!GO:0016071;mRNA metabolic process;3.60277616655865e-48!GO:0005840;ribosome;1.13124061902841e-46!GO:0016070;RNA metabolic process;2.77522444098116e-46!GO:0033036;macromolecule localization;1.82394422687385e-45!GO:0019538;protein metabolic process;5.31416866000735e-44!GO:0044267;cellular protein metabolic process;4.36669552226371e-43!GO:0015031;protein transport;4.84853810575347e-43!GO:0008380;RNA splicing;1.89470294355316e-42!GO:0044260;cellular macromolecule metabolic process;1.95782547089431e-42!GO:0005515;protein binding;1.99337073982295e-41!GO:0043234;protein complex;2.28843837778237e-41!GO:0008104;protein localization;3.64956358158258e-41!GO:0045184;establishment of protein localization;8.66335330614969e-41!GO:0006397;mRNA processing;9.94454706150853e-41!GO:0003735;structural constituent of ribosome;1.98830237685647e-40!GO:0009059;macromolecule biosynthetic process;2.12532254347348e-36!GO:0033279;ribosomal subunit;6.29109106084527e-36!GO:0044429;mitochondrial part;6.94127139532752e-36!GO:0031967;organelle envelope;1.5916936578341e-35!GO:0031090;organelle membrane;2.04325372703142e-35!GO:0031975;envelope;3.3457873819104e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.41752607327699e-33!GO:0005654;nucleoplasm;7.62961574037996e-33!GO:0006259;DNA metabolic process;6.3823181813436e-32!GO:0005681;spliceosome;2.40720573292358e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.35512413580036e-30!GO:0006886;intracellular protein transport;6.4417042328826e-30!GO:0005829;cytosol;3.55738327555362e-29!GO:0046907;intracellular transport;3.77257860546839e-29!GO:0044249;cellular biosynthetic process;1.29003841336122e-27!GO:0006512;ubiquitin cycle;2.97834411424738e-27!GO:0065003;macromolecular complex assembly;2.97834411424738e-27!GO:0016043;cellular component organization and biogenesis;6.06103221109835e-27!GO:0009058;biosynthetic process;7.19888784118439e-27!GO:0044451;nucleoplasm part;2.16907501124872e-26!GO:0044445;cytosolic part;1.21165809086431e-25!GO:0000166;nucleotide binding;3.37502913467852e-25!GO:0022607;cellular component assembly;3.74720569536331e-24!GO:0005740;mitochondrial envelope;2.20312661897522e-22!GO:0016874;ligase activity;6.0468127120801e-22!GO:0031966;mitochondrial membrane;9.97236169853993e-22!GO:0006996;organelle organization and biogenesis;1.14053840361237e-21!GO:0019866;organelle inner membrane;4.74890376054259e-21!GO:0022618;protein-RNA complex assembly;6.70964062030486e-21!GO:0005730;nucleolus;2.47289018827172e-20!GO:0015935;small ribosomal subunit;8.4097939090539e-20!GO:0051641;cellular localization;1.88319363029517e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.3492106049602e-19!GO:0016462;pyrophosphatase activity;2.67982746893996e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;2.87167085932322e-19!GO:0043412;biopolymer modification;3.03353364476911e-19!GO:0044265;cellular macromolecule catabolic process;4.43884422015683e-19!GO:0017111;nucleoside-triphosphatase activity;5.36564056778883e-19!GO:0051649;establishment of cellular localization;6.07564803816876e-19!GO:0005743;mitochondrial inner membrane;7.36004494085365e-19!GO:0016604;nuclear body;1.46154855297962e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;3.44890677731494e-18!GO:0019941;modification-dependent protein catabolic process;4.47094731816996e-18!GO:0043632;modification-dependent macromolecule catabolic process;4.47094731816996e-18!GO:0006511;ubiquitin-dependent protein catabolic process;4.50329604438573e-18!GO:0008135;translation factor activity, nucleic acid binding;5.05341475214794e-18!GO:0044257;cellular protein catabolic process;7.42915613105497e-18!GO:0006119;oxidative phosphorylation;3.31953763450156e-17!GO:0015934;large ribosomal subunit;3.64000035705959e-17!GO:0006605;protein targeting;4.87930957545806e-17!GO:0043285;biopolymer catabolic process;5.65768878306214e-17!GO:0044455;mitochondrial membrane part;1.28148843469905e-16!GO:0032553;ribonucleotide binding;1.48309015739686e-16!GO:0032555;purine ribonucleotide binding;1.48309015739686e-16!GO:0019222;regulation of metabolic process;1.51652952864208e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;1.7923982399441e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.89319596362273e-16!GO:0051276;chromosome organization and biogenesis;2.08748774142865e-16!GO:0006464;protein modification process;2.36162083280793e-16!GO:0050794;regulation of cellular process;3.34477640256332e-16!GO:0017076;purine nucleotide binding;3.50680736927279e-16!GO:0043687;post-translational protein modification;7.443416732218e-16!GO:0006323;DNA packaging;8.03812230766247e-16!GO:0016607;nuclear speck;8.66507797410006e-16!GO:0031980;mitochondrial lumen;1.26186109962455e-15!GO:0005759;mitochondrial matrix;1.26186109962455e-15!GO:0006974;response to DNA damage stimulus;1.50623123812403e-15!GO:0016887;ATPase activity;2.58398361338604e-15!GO:0043228;non-membrane-bound organelle;4.05896649499886e-15!GO:0043232;intracellular non-membrane-bound organelle;4.05896649499886e-15!GO:0008270;zinc ion binding;5.09971362570288e-15!GO:0006913;nucleocytoplasmic transport;5.60124138074838e-15!GO:0004386;helicase activity;5.66776604675838e-15!GO:0009057;macromolecule catabolic process;6.70092352857387e-15!GO:0008134;transcription factor binding;6.948842430428e-15!GO:0042623;ATPase activity, coupled;7.83032914333331e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;8.0016825689002e-15!GO:0000375;RNA splicing, via transesterification reactions;8.0016825689002e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.0016825689002e-15!GO:0051169;nuclear transport;8.80508530528069e-15!GO:0031323;regulation of cellular metabolic process;1.07251483227728e-14!GO:0006350;transcription;1.34589774494054e-14!GO:0006457;protein folding;1.79629682783989e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.30331158603083e-14!GO:0005524;ATP binding;2.58521488482142e-14!GO:0006281;DNA repair;5.57482807739979e-14!GO:0032559;adenyl ribonucleotide binding;8.28742857074176e-14!GO:0005635;nuclear envelope;9.21879220811775e-14!GO:0003743;translation initiation factor activity;1.24582575414029e-13!GO:0031965;nuclear membrane;1.47005525798871e-13!GO:0006413;translational initiation;1.96140415805808e-13!GO:0030554;adenyl nucleotide binding;2.36440248164606e-13!GO:0012505;endomembrane system;3.36542894320492e-13!GO:0010468;regulation of gene expression;3.76193093495852e-13!GO:0030163;protein catabolic process;5.08485250362886e-13!GO:0008026;ATP-dependent helicase activity;5.58515367424683e-13!GO:0042254;ribosome biogenesis and assembly;8.5970923252685e-13!GO:0044453;nuclear membrane part;9.14778654994297e-13!GO:0012501;programmed cell death;9.38861832917604e-13!GO:0006915;apoptosis;1.01976056579095e-12!GO:0016568;chromatin modification;1.0899065637188e-12!GO:0005746;mitochondrial respiratory chain;1.46348948398553e-12!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.06456985179188e-12!GO:0008219;cell death;3.54174977844792e-12!GO:0016265;death;3.54174977844792e-12!GO:0032774;RNA biosynthetic process;3.56999231859535e-12!GO:0006403;RNA localization;4.11272764627189e-12!GO:0050657;nucleic acid transport;4.36797753770219e-12!GO:0051236;establishment of RNA localization;4.36797753770219e-12!GO:0050658;RNA transport;4.36797753770219e-12!GO:0008639;small protein conjugating enzyme activity;4.65403349633615e-12!GO:0044248;cellular catabolic process;4.80321969420243e-12!GO:0006351;transcription, DNA-dependent;4.84164299882097e-12!GO:0004842;ubiquitin-protein ligase activity;6.02977684823659e-12!GO:0019787;small conjugating protein ligase activity;6.50713250131005e-12!GO:0000502;proteasome complex (sensu Eukaryota);9.8199534489195e-12!GO:0005643;nuclear pore;1.77135791963941e-11!GO:0050136;NADH dehydrogenase (quinone) activity;2.33001985408655e-11!GO:0003954;NADH dehydrogenase activity;2.33001985408655e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.33001985408655e-11!GO:0005694;chromosome;2.88254151622269e-11!GO:0006446;regulation of translational initiation;3.29359254928254e-11!GO:0046914;transition metal ion binding;4.2934377407095e-11!GO:0045449;regulation of transcription;5.2362888196316e-11!GO:0051082;unfolded protein binding;5.2362888196316e-11!GO:0007049;cell cycle;5.37282330073747e-11!GO:0017038;protein import;6.28831371163458e-11!GO:0050789;regulation of biological process;7.85550381519913e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.34403859417512e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.04839462803018e-10!GO:0048193;Golgi vesicle transport;2.06540851478793e-10!GO:0065004;protein-DNA complex assembly;2.09853479875821e-10!GO:0051028;mRNA transport;2.59485663791907e-10!GO:0006333;chromatin assembly or disassembly;2.89028357430452e-10!GO:0042775;organelle ATP synthesis coupled electron transport;3.25371684508862e-10!GO:0042773;ATP synthesis coupled electron transport;3.25371684508862e-10!GO:0006399;tRNA metabolic process;4.16996691622579e-10!GO:0006355;regulation of transcription, DNA-dependent;4.93449294637567e-10!GO:0005761;mitochondrial ribosome;5.37326332393038e-10!GO:0000313;organellar ribosome;5.37326332393038e-10!GO:0003677;DNA binding;8.37056675835486e-10!GO:0003712;transcription cofactor activity;9.74925950209896e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.08571169977373e-09!GO:0045271;respiratory chain complex I;1.08571169977373e-09!GO:0005747;mitochondrial respiratory chain complex I;1.08571169977373e-09!GO:0065002;intracellular protein transport across a membrane;1.3288439624426e-09!GO:0016881;acid-amino acid ligase activity;1.36614337836241e-09!GO:0051186;cofactor metabolic process;1.43117896347986e-09!GO:0044427;chromosomal part;1.46633973738904e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.73066405654846e-09!GO:0043566;structure-specific DNA binding;2.00727073354737e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.51390583076359e-09!GO:0016072;rRNA metabolic process;3.46611254181583e-09!GO:0046930;pore complex;3.75022951791183e-09!GO:0006364;rRNA processing;3.95009237785518e-09!GO:0009719;response to endogenous stimulus;5.30499002542519e-09!GO:0048770;pigment granule;5.71429982967477e-09!GO:0042470;melanosome;5.71429982967477e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.97983812147553e-09!GO:0032446;protein modification by small protein conjugation;1.27762622980221e-08!GO:0009259;ribonucleotide metabolic process;1.3068569840079e-08!GO:0042981;regulation of apoptosis;1.3068569840079e-08!GO:0005794;Golgi apparatus;1.7929941302002e-08!GO:0043067;regulation of programmed cell death;1.7929941302002e-08!GO:0008565;protein transporter activity;2.32213378085333e-08!GO:0009260;ribonucleotide biosynthetic process;2.50984674876743e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.6089824931655e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.84381915178372e-08!GO:0016567;protein ubiquitination;3.26793214935152e-08!GO:0019829;cation-transporting ATPase activity;3.60614771731251e-08!GO:0000785;chromatin;3.92484971109066e-08!GO:0003713;transcription coactivator activity;4.23837911873476e-08!GO:0016787;hydrolase activity;5.06909589534039e-08!GO:0000151;ubiquitin ligase complex;5.0876279878406e-08!GO:0003697;single-stranded DNA binding;5.15246036612879e-08!GO:0006164;purine nucleotide biosynthetic process;5.19528568718261e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.97580235481033e-08!GO:0006163;purine nucleotide metabolic process;9.43149091478204e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.02677508858302e-07!GO:0006732;coenzyme metabolic process;1.02950614292084e-07!GO:0022402;cell cycle process;1.30820009477433e-07!GO:0016779;nucleotidyltransferase activity;1.73374472591474e-07!GO:0051726;regulation of cell cycle;1.90975509469977e-07!GO:0009150;purine ribonucleotide metabolic process;1.97526089295435e-07!GO:0051170;nuclear import;2.01982464505978e-07!GO:0009060;aerobic respiration;2.02364265591699e-07!GO:0006366;transcription from RNA polymerase II promoter;2.8002587272889e-07!GO:0000074;regulation of progression through cell cycle;2.92186945012663e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.95909770484485e-07!GO:0006793;phosphorus metabolic process;3.12481902841382e-07!GO:0006796;phosphate metabolic process;3.12481902841382e-07!GO:0006606;protein import into nucleus;3.17703617673253e-07!GO:0016563;transcription activator activity;3.65547748261405e-07!GO:0016740;transferase activity;4.36567500168373e-07!GO:0003724;RNA helicase activity;4.50155094903354e-07!GO:0051168;nuclear export;6.76199882994235e-07!GO:0006260;DNA replication;7.85357130117059e-07!GO:0000245;spliceosome assembly;7.85357130117059e-07!GO:0015078;hydrogen ion transmembrane transporter activity;9.54653272416263e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.03542738466708e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.03542738466708e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.03542738466708e-06!GO:0016192;vesicle-mediated transport;1.08588108495212e-06!GO:0005768;endosome;1.18757691526725e-06!GO:0015986;ATP synthesis coupled proton transport;1.23864240330699e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.23864240330699e-06!GO:0045333;cellular respiration;1.49131479295617e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.57007237942256e-06!GO:0006334;nucleosome assembly;1.72745674655568e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.84573607699151e-06!GO:0016310;phosphorylation;2.18160820455912e-06!GO:0043038;amino acid activation;2.21498302722104e-06!GO:0006418;tRNA aminoacylation for protein translation;2.21498302722104e-06!GO:0043039;tRNA aminoacylation;2.21498302722104e-06!GO:0031497;chromatin assembly;2.70154074698137e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.82129304873566e-06!GO:0065007;biological regulation;3.05060568087565e-06!GO:0044432;endoplasmic reticulum part;3.73654242664281e-06!GO:0004298;threonine endopeptidase activity;3.94670073357873e-06!GO:0051188;cofactor biosynthetic process;4.31987493511677e-06!GO:0045259;proton-transporting ATP synthase complex;4.80098770877935e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.96497823539331e-06!GO:0009056;catabolic process;6.11838379418645e-06!GO:0006754;ATP biosynthetic process;6.11838379418645e-06!GO:0006753;nucleoside phosphate metabolic process;6.11838379418645e-06!GO:0016469;proton-transporting two-sector ATPase complex;7.76908692569952e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.78389329199383e-06!GO:0015399;primary active transmembrane transporter activity;7.78389329199383e-06!GO:0046034;ATP metabolic process;8.34719131239451e-06!GO:0009199;ribonucleoside triphosphate metabolic process;8.67000422778213e-06!GO:0009142;nucleoside triphosphate biosynthetic process;9.29574806283057e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.29574806283057e-06!GO:0008186;RNA-dependent ATPase activity;1.1700334280114e-05!GO:0009141;nucleoside triphosphate metabolic process;1.19356917523143e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.22918411781548e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.22918411781548e-05!GO:0006099;tricarboxylic acid cycle;1.33332855162764e-05!GO:0046356;acetyl-CoA catabolic process;1.33332855162764e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.33332855162764e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.33332855162764e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.37186336234366e-05!GO:0006401;RNA catabolic process;1.50804564816579e-05!GO:0008234;cysteine-type peptidase activity;1.96303948090479e-05!GO:0051246;regulation of protein metabolic process;2.00538088615707e-05!GO:0003690;double-stranded DNA binding;2.12559070749697e-05!GO:0005789;endoplasmic reticulum membrane;2.28785282885742e-05!GO:0006084;acetyl-CoA metabolic process;2.33298723130118e-05!GO:0006613;cotranslational protein targeting to membrane;2.37284750638959e-05!GO:0007005;mitochondrion organization and biogenesis;2.45281419724064e-05!GO:0006402;mRNA catabolic process;3.24388245274964e-05!GO:0009108;coenzyme biosynthetic process;3.41967511960898e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.43511549117379e-05!GO:0006916;anti-apoptosis;3.46713482131899e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.56079770219189e-05!GO:0016363;nuclear matrix;3.75822510357237e-05!GO:0019899;enzyme binding;3.83846803187927e-05!GO:0004004;ATP-dependent RNA helicase activity;3.95983121605592e-05!GO:0007243;protein kinase cascade;3.96254013191319e-05!GO:0045786;negative regulation of progression through cell cycle;3.9778413655681e-05!GO:0005783;endoplasmic reticulum;4.02863681561555e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.41153328342034e-05!GO:0030120;vesicle coat;4.64342939322746e-05!GO:0030662;coated vesicle membrane;4.64342939322746e-05!GO:0031324;negative regulation of cellular metabolic process;5.56138894529185e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.9193663226894e-05!GO:0043623;cellular protein complex assembly;6.36394312287203e-05!GO:0008168;methyltransferase activity;7.66199128474303e-05!GO:0016741;transferase activity, transferring one-carbon groups;8.04123278699475e-05!GO:0009109;coenzyme catabolic process;9.58414277216517e-05!GO:0043069;negative regulation of programmed cell death;9.62069161542365e-05!GO:0044431;Golgi apparatus part;9.62522903966678e-05!GO:0016564;transcription repressor activity;9.75505743854875e-05!GO:0065009;regulation of a molecular function;9.77829188728589e-05!GO:0005667;transcription factor complex;9.97659109462401e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000101514623883425!GO:0048523;negative regulation of cellular process;0.000107312507465446!GO:0008033;tRNA processing;0.00010928794014272!GO:0003899;DNA-directed RNA polymerase activity;0.000118321615697943!GO:0016251;general RNA polymerase II transcription factor activity;0.000125115647366631!GO:0005813;centrosome;0.000130472426667253!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000132130548246346!GO:0048475;coated membrane;0.000132130548246346!GO:0030117;membrane coat;0.000132130548246346!GO:0009055;electron carrier activity;0.000136052666694948!GO:0043066;negative regulation of apoptosis;0.000136052666694948!GO:0043492;ATPase activity, coupled to movement of substances;0.000142742107502904!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000144959175015684!GO:0006612;protein targeting to membrane;0.000145455606132428!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000154255063852085!GO:0003729;mRNA binding;0.000165369014252045!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000180835806283456!GO:0006461;protein complex assembly;0.000197720756965572!GO:0006752;group transfer coenzyme metabolic process;0.000198877509762819!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000208161233728696!GO:0006310;DNA recombination;0.000213004706813957!GO:0005793;ER-Golgi intermediate compartment;0.000251957196323337!GO:0043021;ribonucleoprotein binding;0.000255340840697204!GO:0006352;transcription initiation;0.000259515784088042!GO:0051187;cofactor catabolic process;0.00026488331361225!GO:0008654;phospholipid biosynthetic process;0.000285198795234678!GO:0006383;transcription from RNA polymerase III promoter;0.000294578036170445!GO:0019783;small conjugating protein-specific protease activity;0.000329955103555313!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000348911064560085!GO:0005525;GTP binding;0.000351788721604012!GO:0016481;negative regulation of transcription;0.000352346691976543!GO:0004674;protein serine/threonine kinase activity;0.000353966014206713!GO:0030384;phosphoinositide metabolic process;0.00037276788503678!GO:0006261;DNA-dependent DNA replication;0.000383503294550864!GO:0006891;intra-Golgi vesicle-mediated transport;0.000383515460152216!GO:0009892;negative regulation of metabolic process;0.000444479580408271!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000453741984850577!GO:0005815;microtubule organizing center;0.000484173702341444!GO:0004843;ubiquitin-specific protease activity;0.000491264233971309!GO:0044440;endosomal part;0.000491323347868794!GO:0010008;endosome membrane;0.000491323347868794!GO:0005885;Arp2/3 protein complex;0.000495893807478532!GO:0060090;molecular adaptor activity;0.000631537488273408!GO:0004221;ubiquitin thiolesterase activity;0.000662208798652236!GO:0051427;hormone receptor binding;0.000685365872444354!GO:0044452;nucleolar part;0.000722144018427571!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000759582171209946!GO:0046489;phosphoinositide biosynthetic process;0.000784555841295655!GO:0032259;methylation;0.00081880150360803!GO:0006917;induction of apoptosis;0.00083247265669601!GO:0006611;protein export from nucleus;0.000863065863809233!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00087531755743623!GO:0019843;rRNA binding;0.000899404473943189!GO:0031072;heat shock protein binding;0.000943901407356674!GO:0006607;NLS-bearing substrate import into nucleus;0.000943901407356674!GO:0043681;protein import into mitochondrion;0.000972403664444025!GO:0006405;RNA export from nucleus;0.000980399093235079!GO:0003924;GTPase activity;0.000988904797842294!GO:0005769;early endosome;0.00104350580687347!GO:0048519;negative regulation of biological process;0.00109214395251945!GO:0051539;4 iron, 4 sulfur cluster binding;0.00109590751844449!GO:0012502;induction of programmed cell death;0.00113429530086332!GO:0035257;nuclear hormone receptor binding;0.00114253749667806!GO:0005762;mitochondrial large ribosomal subunit;0.00114388598514336!GO:0000315;organellar large ribosomal subunit;0.00114388598514336!GO:0006818;hydrogen transport;0.00115531338432471!GO:0000314;organellar small ribosomal subunit;0.00115993952500844!GO:0005763;mitochondrial small ribosomal subunit;0.00115993952500844!GO:0009117;nucleotide metabolic process;0.00126995950340751!GO:0006650;glycerophospholipid metabolic process;0.00132172186625332!GO:0000139;Golgi membrane;0.00134236547974502!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0013757611411843!GO:0004527;exonuclease activity;0.00141308599522955!GO:0015992;proton transport;0.00141509534907082!GO:0005770;late endosome;0.00164924685599049!GO:0004518;nuclease activity;0.00170745380240195!GO:0005773;vacuole;0.00183335080953082!GO:0000278;mitotic cell cycle;0.00191539876196096!GO:0043414;biopolymer methylation;0.00195904544655938!GO:0003746;translation elongation factor activity;0.00196140566081604!GO:0005798;Golgi-associated vesicle;0.00197205797536595!GO:0015631;tubulin binding;0.00204653652497968!GO:0006414;translational elongation;0.00207752017502031!GO:0031625;ubiquitin protein ligase binding;0.00218565147918407!GO:0019867;outer membrane;0.00219978942133746!GO:0000786;nucleosome;0.00223924582474168!GO:0016790;thiolester hydrolase activity;0.00225250000969055!GO:0046474;glycerophospholipid biosynthetic process;0.00234273172861697!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.002378358921914!GO:0006417;regulation of translation;0.00241256559901233!GO:0003678;DNA helicase activity;0.00258321585933902!GO:0005684;U2-dependent spliceosome;0.00261120599903332!GO:0043065;positive regulation of apoptosis;0.00266904656451112!GO:0048500;signal recognition particle;0.00276287183472837!GO:0051252;regulation of RNA metabolic process;0.00278430064942546!GO:0008632;apoptotic program;0.00292917071912249!GO:0051087;chaperone binding;0.00306812415347271!GO:0006289;nucleotide-excision repair;0.00307920070224502!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00308209898161541!GO:0031968;organelle outer membrane;0.00308247143921102!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00310229078828085!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00310229078828085!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00310229078828085!GO:0032561;guanyl ribonucleotide binding;0.00311476908676674!GO:0019001;guanyl nucleotide binding;0.00311476908676674!GO:0005741;mitochondrial outer membrane;0.00335654070743636!GO:0008312;7S RNA binding;0.00335654070743636!GO:0009615;response to virus;0.00337538194495305!GO:0006338;chromatin remodeling;0.00337867383917297!GO:0007242;intracellular signaling cascade;0.00347786935679758!GO:0043068;positive regulation of programmed cell death;0.00357710473116628!GO:0000323;lytic vacuole;0.00365523700309919!GO:0005764;lysosome;0.00365523700309919!GO:0003682;chromatin binding;0.00366897141968544!GO:0007006;mitochondrial membrane organization and biogenesis;0.00388179582347194!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00397916770031642!GO:0004532;exoribonuclease activity;0.0040128647492562!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0040128647492562!GO:0032200;telomere organization and biogenesis;0.0040128647492562!GO:0000723;telomere maintenance;0.0040128647492562!GO:0042101;T cell receptor complex;0.0042626423512567!GO:0007265;Ras protein signal transduction;0.00438121322839385!GO:0016197;endosome transport;0.00438799382316049!GO:0051540;metal cluster binding;0.00439562501313769!GO:0051536;iron-sulfur cluster binding;0.00439562501313769!GO:0031326;regulation of cellular biosynthetic process;0.00440248532878016!GO:0016584;nucleosome positioning;0.00448708436576298!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00464436426167639!GO:0045047;protein targeting to ER;0.00464436426167639!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00492748667497632!GO:0008017;microtubule binding;0.00496097768016309!GO:0008022;protein C-terminus binding;0.00498868662731577!GO:0005637;nuclear inner membrane;0.00514666049264521!GO:0030518;steroid hormone receptor signaling pathway;0.00514843499199254!GO:0005669;transcription factor TFIID complex;0.00518606117767196!GO:0000209;protein polyubiquitination;0.00579449595420716!GO:0043488;regulation of mRNA stability;0.00598111749875762!GO:0043487;regulation of RNA stability;0.00598111749875762!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00598519660526168!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00656857242920447!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00656857242920447!GO:0048471;perinuclear region of cytoplasm;0.00658144874634397!GO:0005083;small GTPase regulator activity;0.00666552354755226!GO:0008408;3'-5' exonuclease activity;0.00679661627392483!GO:0030695;GTPase regulator activity;0.00685199730078447!GO:0006497;protein amino acid lipidation;0.00719073992470534!GO:0022890;inorganic cation transmembrane transporter activity;0.00752885946962875!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00848442485627667!GO:0006626;protein targeting to mitochondrion;0.00867025862973351!GO:0007264;small GTPase mediated signal transduction;0.00871546032939782!GO:0006839;mitochondrial transport;0.00874583295753843!GO:0006302;double-strand break repair;0.00897810892021287!GO:0003711;transcription elongation regulator activity;0.00919939730654697!GO:0030258;lipid modification;0.00938433453548059!GO:0050790;regulation of catalytic activity;0.00966490737876536!GO:0005070;SH3/SH2 adaptor activity;0.00984557007987936!GO:0008276;protein methyltransferase activity;0.0100341827146934!GO:0040029;regulation of gene expression, epigenetic;0.0100341827146934!GO:0030521;androgen receptor signaling pathway;0.0100341827146934!GO:0047485;protein N-terminus binding;0.0100341827146934!GO:0046966;thyroid hormone receptor binding;0.010111727915641!GO:0046467;membrane lipid biosynthetic process;0.010658239859461!GO:0000049;tRNA binding;0.0108293995358138!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0108911377820308!GO:0003725;double-stranded RNA binding;0.0110028370909517!GO:0044438;microbody part;0.0110028370909517!GO:0044439;peroxisomal part;0.0110028370909517!GO:0009165;nucleotide biosynthetic process;0.0110267609818187!GO:0016788;hydrolase activity, acting on ester bonds;0.0111028522192716!GO:0006506;GPI anchor biosynthetic process;0.011698339540518!GO:0031461;cullin-RING ubiquitin ligase complex;0.0118524922290185!GO:0005774;vacuolar membrane;0.0119003326515479!GO:0003684;damaged DNA binding;0.0119839556335262!GO:0008047;enzyme activator activity;0.0120283560541043!GO:0003714;transcription corepressor activity;0.0120884163871704!GO:0000781;chromosome, telomeric region;0.0122661679392225!GO:0030522;intracellular receptor-mediated signaling pathway;0.0126959564106572!GO:0016859;cis-trans isomerase activity;0.0127036717885639!GO:0006376;mRNA splice site selection;0.0127036717885639!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0127036717885639!GO:0008097;5S rRNA binding;0.0130672877119987!GO:0030880;RNA polymerase complex;0.0133903533025243!GO:0030658;transport vesicle membrane;0.0134905962550476!GO:0000059;protein import into nucleus, docking;0.0134905962550476!GO:0048487;beta-tubulin binding;0.0135689244317835!GO:0051789;response to protein stimulus;0.0136888167599274!GO:0006986;response to unfolded protein;0.0136888167599274!GO:0007004;telomere maintenance via telomerase;0.0137393867367393!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0137523166421706!GO:0015980;energy derivation by oxidation of organic compounds;0.0149115370604783!GO:0050852;T cell receptor signaling pathway;0.0151614085920415!GO:0016853;isomerase activity;0.0152932849014522!GO:0051301;cell division;0.0154778514768289!GO:0006505;GPI anchor metabolic process;0.0155120820193149!GO:0045892;negative regulation of transcription, DNA-dependent;0.0157653414738234!GO:0005048;signal sequence binding;0.0161484327047625!GO:0043087;regulation of GTPase activity;0.0162673452149323!GO:0042110;T cell activation;0.0166320047962625!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0166320047962625!GO:0015002;heme-copper terminal oxidase activity;0.0166320047962625!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0166320047962625!GO:0004129;cytochrome-c oxidase activity;0.0166320047962625!GO:0016272;prefoldin complex;0.01665495916234!GO:0000178;exosome (RNase complex);0.0176556302732169!GO:0001772;immunological synapse;0.0176556302732169!GO:0000119;mediator complex;0.0189002694408137!GO:0009161;ribonucleoside monophosphate metabolic process;0.0190499248807511!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0190499248807511!GO:0009889;regulation of biosynthetic process;0.0190913626776746!GO:0009116;nucleoside metabolic process;0.0193724423102991!GO:0031903;microbody membrane;0.0193773336770597!GO:0005778;peroxisomal membrane;0.0193773336770597!GO:0008287;protein serine/threonine phosphatase complex;0.0194520566577748!GO:0009112;nucleobase metabolic process;0.0197832738753976!GO:0008624;induction of apoptosis by extracellular signals;0.0197832738753976!GO:0022406;membrane docking;0.0197832738753976!GO:0048278;vesicle docking;0.0197832738753976!GO:0005765;lysosomal membrane;0.0198972279344576!GO:0008139;nuclear localization sequence binding;0.0203423320251033!GO:0042158;lipoprotein biosynthetic process;0.0204225588034876!GO:0004722;protein serine/threonine phosphatase activity;0.0204463268153835!GO:0045603;positive regulation of endothelial cell differentiation;0.0204755837158832!GO:0000738;DNA catabolic process, exonucleolytic;0.0207159013269599!GO:0005521;lamin binding;0.0208797865581174!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0208797865581174!GO:0000428;DNA-directed RNA polymerase complex;0.0208797865581174!GO:0022415;viral reproductive process;0.0217498547532384!GO:0016585;chromatin remodeling complex;0.0223701863523696!GO:0051052;regulation of DNA metabolic process;0.0225130022362491!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0225735139498542!GO:0044437;vacuolar part;0.0226257473527704!GO:0050811;GABA receptor binding;0.0227313249379109!GO:0006904;vesicle docking during exocytosis;0.0229913949859414!GO:0001667;ameboidal cell migration;0.0234659326561339!GO:0032027;myosin light chain binding;0.0234659326561339!GO:0007050;cell cycle arrest;0.0238491330403894!GO:0004197;cysteine-type endopeptidase activity;0.0241908318917828!GO:0033116;ER-Golgi intermediate compartment membrane;0.0241908318917828!GO:0030118;clathrin coat;0.0245546085528714!GO:0043022;ribosome binding;0.0246868924803703!GO:0042393;histone binding;0.0256521126898289!GO:0030137;COPI-coated vesicle;0.0260043729379321!GO:0006278;RNA-dependent DNA replication;0.0260382213168503!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0260382213168503!GO:0000175;3'-5'-exoribonuclease activity;0.0263218952313168!GO:0003702;RNA polymerase II transcription factor activity;0.0263690018532989!GO:0043621;protein self-association;0.0263690018532989!GO:0016301;kinase activity;0.0264867490851342!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0264867490851342!GO:0010257;NADH dehydrogenase complex assembly;0.0264867490851342!GO:0033108;mitochondrial respiratory chain complex assembly;0.0264867490851342!GO:0016569;covalent chromatin modification;0.0264867490851342!GO:0006013;mannose metabolic process;0.0265570225587362!GO:0030660;Golgi-associated vesicle membrane;0.0273266663717198!GO:0032508;DNA duplex unwinding;0.0273277767881434!GO:0032392;DNA geometric change;0.0273277767881434!GO:0016570;histone modification;0.0279806599060752!GO:0006406;mRNA export from nucleus;0.0281731754007674!GO:0005869;dynactin complex;0.0283914276359406!GO:0005657;replication fork;0.028397169454945!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0286614073557313!GO:0051336;regulation of hydrolase activity;0.028838609677822!GO:0031647;regulation of protein stability;0.028909494379901!GO:0030663;COPI coated vesicle membrane;0.029327643731881!GO:0030126;COPI vesicle coat;0.029327643731881!GO:0005777;peroxisome;0.0298976089211344!GO:0042579;microbody;0.0298976089211344!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0300638238555666!GO:0000726;non-recombinational repair;0.0303664699483119!GO:0016763;transferase activity, transferring pentosyl groups;0.0303664699483119!GO:0042608;T cell receptor binding;0.0303664699483119!GO:0000287;magnesium ion binding;0.0317708869265333!GO:0000776;kinetochore;0.0317708869265333!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0320062812249238!GO:0016605;PML body;0.0323491530786783!GO:0016279;protein-lysine N-methyltransferase activity;0.0333341719215217!GO:0018024;histone-lysine N-methyltransferase activity;0.0333341719215217!GO:0016278;lysine N-methyltransferase activity;0.0333341719215217!GO:0000118;histone deacetylase complex;0.0335621204008677!GO:0022403;cell cycle phase;0.0338150376661625!GO:0006914;autophagy;0.0340427119381317!GO:0031124;mRNA 3'-end processing;0.0344438639850405!GO:0008320;protein transmembrane transporter activity;0.0345227223055412!GO:0046822;regulation of nucleocytoplasmic transport;0.0347114595782689!GO:0048002;antigen processing and presentation of peptide antigen;0.0349742362066827!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0351167594279423!GO:0008094;DNA-dependent ATPase activity;0.0356496973508223!GO:0006595;polyamine metabolic process;0.0356550440097274!GO:0046854;phosphoinositide phosphorylation;0.0361299074266123!GO:0016791;phosphoric monoester hydrolase activity;0.0365298044663863!GO:0051251;positive regulation of lymphocyte activation;0.0366958315901033!GO:0000090;mitotic anaphase;0.0366958315901033!GO:0051322;anaphase;0.0366958315901033!GO:0009451;RNA modification;0.036806358689598!GO:0005832;chaperonin-containing T-complex;0.0371287524402966!GO:0004659;prenyltransferase activity;0.0379791035424667!GO:0045947;negative regulation of translational initiation;0.038852870952269!GO:0009967;positive regulation of signal transduction;0.0391828777596104!GO:0015923;mannosidase activity;0.0391916664198596!GO:0004402;histone acetyltransferase activity;0.0397006289925553!GO:0004468;lysine N-acetyltransferase activity;0.0397006289925553!GO:0008180;signalosome;0.0397070690052201!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0406111126138754!GO:0046426;negative regulation of JAK-STAT cascade;0.0406992943973269!GO:0019901;protein kinase binding;0.0407441689069076!GO:0050870;positive regulation of T cell activation;0.040878116326959!GO:0004003;ATP-dependent DNA helicase activity;0.0409534515374027!GO:0030833;regulation of actin filament polymerization;0.041110269334342!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0411171496871316!GO:0015630;microtubule cytoskeleton;0.0412986213723682!GO:0046834;lipid phosphorylation;0.0416524604436797!GO:0031123;RNA 3'-end processing;0.0418930620401419!GO:0008213;protein amino acid alkylation;0.0433562446792237!GO:0006479;protein amino acid methylation;0.0433562446792237!GO:0007034;vacuolar transport;0.0434470850513718!GO:0042802;identical protein binding;0.0434470850513718!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0441315258039144!GO:0008173;RNA methyltransferase activity;0.0441315258039144!GO:0000123;histone acetyltransferase complex;0.0442236224594337!GO:0031902;late endosome membrane;0.0444130093741487!GO:0002378;immunoglobulin biosynthetic process;0.0452786312413382!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0452786312413382!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0452786312413382!GO:0022884;macromolecule transmembrane transporter activity;0.0452786312413382!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0452786312413382!GO:0019904;protein domain specific binding;0.0456924516773381!GO:0051235;maintenance of localization;0.046317773837022!GO:0006301;postreplication repair;0.0467265809146307!GO:0000087;M phase of mitotic cell cycle;0.0470783546396147!GO:0030127;COPII vesicle coat;0.0472343336197645!GO:0012507;ER to Golgi transport vesicle membrane;0.0472343336197645!GO:0006144;purine base metabolic process;0.0472343336197645!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0480155412510842!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0486259037179254!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0486259037179254!GO:0009126;purine nucleoside monophosphate metabolic process;0.0486259037179254!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0486259037179254!GO:0051920;peroxiredoxin activity;0.0489954884202973!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0491505455132978!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0491505455132978!GO:0051452;cellular pH reduction;0.0493722432664836!GO:0051453;regulation of cellular pH;0.0493722432664836!GO:0045851;pH reduction;0.0493722432664836!GO:0035258;steroid hormone receptor binding;0.0498552555153776
 |sample_id=11795
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=blood
 |top_motifs=FOX{D1,D2}:2.93005688477;PAX3,7:2.92016393468;CREB1:2.69351842472;CDX1,2,4:2.5232822633;BPTF:2.43220276335;RUNX1..3:2.31411520212;ELF1,2,4:2.23323208591;PDX1:2.20101749793;FOXO1,3,4:2.05190339211;RFX2..5_RFXANK_RFXAP:1.87451143445;ATF5_CREB3:1.72666350361;DMAP1_NCOR{1,2}_SMARC:1.7103464691;ETS1,2:1.6894328694;ZBTB16:1.62366683761;ATF4:1.52352719418;ELK1,4_GABP{A,B1}:1.51541619938;FOX{F1,F2,J1}:1.46469356749;PBX1:1.45694148141;TLX2:1.44240227443;FOXN1:1.43957077285;PAX6:1.40062401815;HMX1:1.36909432893;NKX6-1,2:1.31462835487;RFX1:1.28963932912;LEF1_TCF7_TCF7L1,2:1.22656809582;BREu{core}:1.18056985685;PAX4:1.17007577589;FOX{I1,J2}:1.16714691222;TGIF1:1.14928775643;IKZF2:1.12948426809;T:1.06578309993;RORA:1.03741659064;PITX1..3:1.02002067862;IRF1,2:0.979443796054;ATF2:0.963621359147;HIF1A:0.939590026384;SPI1:0.936491365493;FOXP1:0.889447091645;GATA6:0.877146613259;NKX2-1,4:0.832305829431;ZEB1:0.814529737442;SPIB:0.805751597996;AHR_ARNT_ARNT2:0.798921455358;PAX2:0.785117223317;STAT1,3:0.717060467434;SPZ1:0.669537226381;SOX2:0.668475057144;JUN:0.634286186835;YY1:0.633983482302;SOX5:0.61647100339;HBP1_HMGB_SSRP1_UBTF:0.584676449299;NFIX:0.495703043176;CUX2:0.40848820673;NRF1:0.393592801036;IRF7:0.360866364339;SNAI1..3:0.358910660914;ATF6:0.347018198135;STAT5{A,B}:0.320408720821;HOX{A6,A7,B6,B7}:0.214508931499;ALX1:0.19780755143;FOXQ1:0.172975387673;LMO2:0.162131019034;POU1F1:0.155291885316;NKX3-1:0.154924218639;CRX:0.128109406626;NANOG:0.119190437282;NKX2-2,8:0.105120280167;SREBF1,2:0.0751164301254;NFIL3:0.0208621517317;NANOG{mouse}:0.00481240226462;NR5A1,2:0.000332032836471;FOXA2:-0.0236776298714;NFKB1_REL_RELA:-0.0433275716769;TAL1_TCF{3,4,12}:-0.0439716642694;OCT4_SOX2{dimer}:-0.045912028422;MAFB:-0.060596543082;ZNF143:-0.0696951942102;FOXD3:-0.104203051777;POU2F1..3:-0.123459122797;VSX1,2:-0.15684378263;MYB:-0.160922216848;HOXA9_MEIS1:-0.192588775165;NFATC1..3:-0.195032406492;NFE2L1:-0.19688818225;AIRE:-0.211314945546;HES1:-0.223924231005;EVI1:-0.226454825494;RBPJ:-0.237210395583;EP300:-0.23743065682;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.247059463247;MYOD1:-0.247447960702;POU3F1..4:-0.252626685675;EGR1..3:-0.299980665796;NFY{A,B,C}:-0.326172835198;HNF1A:-0.331730742934;PRRX1,2:-0.35622285164;AR:-0.359785473946;TOPORS:-0.384760938598;E2F1..5:-0.390889144058;DBP:-0.44669932238;HNF4A_NR2F1,2:-0.479833861598;MYFfamily:-0.485758203194;ADNP_IRX_SIX_ZHX:-0.491980616639;HAND1,2:-0.520430492921;NHLH1,2:-0.523697300141;PAX5:-0.530073900283;TBX4,5:-0.564205988693;FOSL2:-0.592644923482;GLI1..3:-0.607548299632;SMAD1..7,9:-0.618758320788;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.620257951018;STAT2,4,6:-0.63293325455;MEF2{A,B,C,D}:-0.661411903768;HLF:-0.680080224187;RREB1:-0.692938421083;CEBPA,B_DDIT3:-0.701677073576;ARID5B:-0.70236307866;HMGA1,2:-0.70369721461;PAX8:-0.721357941495;GFI1:-0.733780292954;SOX{8,9,10}:-0.797173444169;GFI1B:-0.800943671578;SOX17:-0.802541979293;BACH2:-0.81128557543;FOS_FOS{B,L1}_JUN{B,D}:-0.817367971341;NR6A1:-0.823987291285;MZF1:-0.844335751778;MED-1{core}:-0.857996687427;ZFP161:-0.869932218219;PPARG:-0.944436204403;MYBL2:-0.961464472357;FOXP3:-0.975655553556;ALX4:-0.977587653042;GCM1,2:-0.986551566575;FOXM1:-0.989429009513;XBP1:-0.994936076933;MTE{core}:-1.00500041061;REST:-1.02587286585;ZNF148:-1.03044424942;NFE2:-1.04941565319;MTF1:-1.0512290803;ZNF238:-1.06087381708;bHLH_family:-1.07500398945;PRDM1:-1.09185974455;ZNF384:-1.10623822557;ZBTB6:-1.11991416357;LHX3,4:-1.15651090625;FOXL1:-1.19786963642;POU6F1:-1.19922844422;SRF:-1.24061226836;UFEwm:-1.24360673292;TP53:-1.25808846203;PATZ1:-1.28404147063;GATA4:-1.30107185301;EBF1:-1.32144269819;NKX2-3_NKX2-5:-1.34028846867;NR3C1:-1.3702676998;MAZ:-1.37040302205;RXRA_VDR{dimer}:-1.37921587081;ZNF423:-1.39949257197;HOX{A5,B5}:-1.41513014979;TEF:-1.43558693329;RXR{A,B,G}:-1.46423239446;NFE2L2:-1.4847002929;NKX3-2:-1.52342357414;TFAP4:-1.52700088051;POU5F1:-1.55639313108;GZF1:-1.55820297352;KLF4:-1.57539892594;GTF2I:-1.58431052319;GTF2A1,2:-1.59340640091;HIC1:-1.60517181087;ONECUT1,2:-1.60736489426;EN1,2:-1.62324825975;XCPE1{core}:-1.62435236951;CDC5L:-1.62831640872;HOX{A4,D4}:-1.64748392722;TLX1..3_NFIC{dimer}:-1.65510596907;TEAD1:-1.66585816441;SP1:-1.72047437232;TFCP2:-1.74062642933;NR1H4:-1.76521008971;TFDP1:-1.79681872617;TFAP2B:-1.80389402151;ESR1:-1.80920256331;ZIC1..3:-1.90275139874;TFAP2{A,C}:-1.94995601265;PAX1,9:-2.07298515544;ESRRA:-2.11534147052;TBP:-2.19430180858;HSF1,2:-2.38434276843;IKZF1:-2.7250353178
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11795-124C4;search_select_hide=table117:FF:11795-124C4
 }}

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FF:11795-124C4: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:20, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0