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{{f5samples
{{f5samples
|id=FF:11795-124C4
|DRA_sample_Accession=CAGE@SAMD00005585
|name=CD4+CD25-CD45RA+ naive conventional T cells, donor2
|accession_numbers=CAGE;DRX008191;DRR009063;DRZ000488;DRZ001873;DRZ011838;DRZ013223
|sample_id=11795
|ancestors_in_anatomy_facet=
|rna_tube_id=124C4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
|rna_box=124
|rna_position=C4
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=19
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=23
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.12
|rna_od260/280=2.06
|sample_cell_type=T cell
|sample_cell_line=
|sample_collaboration=Michael Rehli (University of Regensberg)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=1.2848
|rna_concentration=0.12848
|sample_note=
|profile_hcage=CNhs13205,LSID1004,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000805,CL:0000806,CL:0000807,CL:0000808,CL:0000809,CL:0000810,CL:0000813,CL:0000827,CL:0000837,CL:0000838,CL:0000893,CL:0000894,CL:0000895,CL:0000896,CL:0000897,CL:0000898,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002425,CL:0002427,CL:0002428,CL:0002429,CL:0002431,CL:0002432,CL:0002433,CL:0002436,CL:0002489
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000065,UBERON:0000072,UBERON:0000077,UBERON:0000078,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0000974,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001042,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0001557,UBERON:0002050,UBERON:0002193,UBERON:0002342,UBERON:0002346,UBERON:0002368,UBERON:0002370,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002530,UBERON:0002532,UBERON:0003075,UBERON:0003104,UBERON:0003295,UBERON:0003351,UBERON:0003408,UBERON:0003929,UBERON:0004119,UBERON:0004120,UBERON:0004121,UBERON:0004177,UBERON:0004185,UBERON:0004807,UBERON:0004921,UBERON:0005057,UBERON:0005058,UBERON:0005291,UBERON:0005423,UBERON:0005428,UBERON:0005434,UBERON:0005562,UBERON:0005911,UBERON:0006562,UBERON:0006598,UBERON:0007026,UBERON:0007284,UBERON:0007690,UBERON:0009113,UBERON:0009142,UBERON:0009145
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
|comment=Changed from previous label. TODO: full classification
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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AT6B!0.32!1.07!KAT6B;;chr12:46123682..46123698,+!p7@ARID2!0.32!1.07!ARID2;;chr14:64969951..64969972,+!p27@ZBTB1!0.32!1.07!ZBTB1;;chr6:106546834..106546850,+!p4@PRDM1!0.32!1.07!PRDM1;;chr6:91006719..91006730,-!p5@BACH2!0.32!1.07!BACH2;;chr7:108209925..108209941,-!p2@THAP5!0.32!1.07!THAP5;;chr7:137620650..137620677,-!p3@CREB3L2!0.32!1.07!CREB3L2;;chr7:150102756..150102772,+!p5@ZNF775!0.32!1.07!ZNF775;;chr9:117138946..117138968,-!p4@AKNA!0.32!1.07!AKNA;;chr21:43428446..43428452,-!p2@ZNF295!0.32!1.07!ZNF295;;chr22:42739839..42739867,-!p1@ENST00000515426!0.32!1.07!TCF20;;chr2:100759076..100759088,-!p10@AFF3!0.32!1.07!AFF3;;chr2:242556880..242556899,-!p5@THAP4!0.32!1.07!THAP4;;chr2:242556900..242556916,-!p6@THAP4!0.32!1.07!THAP4;;chr2:97203110..97203159,+!p4@ARID5A!0.32!1.07!ARID5A;;chr3:18480105..18480108,-!p48@SATB1!0.32!1.07!SATB1;;chr3:71542733..71542742,-!p81@FOXP1!0.32!1.07!FOXP1;;chr4:109087872..109087881,-!p28@LEF1!0.32!1.07!LEF1;;chr4:109090408..109090441,-!p21@LEF1!0.32!1.07!LEF1;;chr4:83822246..83822277,+!p5@THAP9!0.32!1.07!THAP9;;chr16:8963020..8963054,-!p6@CARHSP1!0.32!1.07!CARHSP1;;chr17:38020607..38020621,-!p9@IKZF3!0.32!1.07!IKZF3;;chr17:40540591..40540600,-!p3@STAT3!0.32!1.07!STAT3;;chr17:42295682..42295731,-!p17@UBTF!0.32!1.07!UBTF;;chr17:45810594..45810608,+!p1@TBX21!0.32!1.07!TBX21;;chr17:46621146..46621180,-!p10@HOXB2!0.32!1.07!HOXB2;;chr17:46621279..46621297,-!p13@HOXB2!0.32!1.07!HOXB2;;chr19:19976620..19976631,+!p4@ZNF253!0.32!1.07!ZNF253;;chr19:38308356..38308378,-!p4@ZNF573!0.32!1.07!ZNF573;;chr19:45972203..45972226,+!p5@FOSB!0.32!1.07!FOSB;;chr19:54041467..54041479,+!p13@ZNF331!0.32!1.07!ZNF331;;chr1:25256439..25256476,-!p3@RUNX3!0.32!1.07!RUNX3;;chr20:56195509..56195520,-!p3@ZBP1!0.32!1.07!ZBP1;;chr21:36421237..36421252,-!p33@RUNX1!0.32!1.07!RUNX1;;chr21:36421518..36421532,-!p11@RUNX1!0.32!1.07!RUNX1;;chr3:169491171..169491205,+!p1@MYNN!0.31!32.10!MYNN;;chr11:47236584..47236679,+!p1@DDB2!0.31!19.80!DDB2;;chr4:10459009..10459061,-!p1@ZNF518B!0.31!15.78!ZNF518B;;chr1:167190091..167190156,+!p1@POU2F1!0.31!14.18!POU2F1;;chr8:135725249..135725292,-!p1@ZFAT!0.31!11.24!ZFAT;;chr19:24269981..24270007,+!p2@ZNF254!0.31!11.24!ZNF254;;chr11:123612319..123612395,-!p1@ZNF202!0.31!9.90!ZNF202;;chr19:36909528..36909581,-!p1@ZFP82!0.31!7.76!ZFP82;;chr19:19516507..19516539,+!p7@GATAD2A!0.31!4.82!GATAD2A;;chr19:53445819..53445860,-!p2@ZNF321P,p2@ZNF816-ZNF321P,p2@ZNF816!0.31!4.82!ZNF321P;;chr16:4323015..4323067,-!p2@TFAP4!0.31!4.28!TFAP4;;chr15:90544532..90544563,+!p1@ZNF710!0.31!2.94!ZNF710;;chr19:37407411..37407451,+!p3@ZNF568!0.31!1.61!ZNF568;;chr3:107241875..107241880,+!p8@BBX!0.31!1.61!BBX;;chr5:138629417..138629446,+!p1@MATR3!0.30!166.41!MATR3;;chr7:127032741..127032777,-!p1@ZNF800!0.30!63.14!ZNF800;;chr1:90460661..90460745,+!p1@ZNF326!0.30!51.37!ZNF326;;chr21:34144024..34144111,-!p1@GCFC1!0.30!37.46!GCFC1;;chr3:126194707..126194798,-!p1@ZXDC!0.30!28.89!ZXDC;;chr4:87856129..87856186,+!p1@AFF1!0.30!24.61!AFF1;;chr18:48494379..48494426,+!p1@ELAC1,p2@SMAD4!0.30!19.53!SMAD4;;chr4:95128999..95129056,+!p2@SMARCAD1!0.30!18.46!SMARCAD1;;chr10:38383255..38383324,+!p1@ZNF37A!0.30!16.32!ZNF37A;;chr19:57999101..57999158,+!p1@ZNF419!0.30!11.77!ZNF419;;chr10:44144292..44144338,-!p1@ZNF32!0.30!10.97!ZNF32;;chr1:161736072..161736093,+!p2@ATF6!0.30!7.76!ATF6;;chr10:35484804..35484902,+!p2@CREM!0.30!6.15!CREM;;chr19:19496577..19496619,+!p5@GATAD2A!0.30!5.35!GATAD2A;;chr15:57210961..57211012,+!p3@TCF12!0.30!5.08!TCF12;;chr14:64971438..64971450,+!p2@ZBTB1!0.30!3.48!ZBTB1;;chr19:52408285..52408310,-!p3@ZNF649!0.30!3.48!ZNF649;;chr10:76585205..76585251,+!p3@KAT6B!0.30!3.21!KAT6B;;chr19:57702832..57702844,+!p2@ZNF264!0.30!2.68!ZNF264;;chr7:64254771..64254782,+!p3@ZNF138!0.30!2.41!ZNF138;;chrX:84499081..84499115,+!p2@ZNF711!0.30!1.87!ZNF711;;chr15:57025823..57025832,-!p3@ZNF280D!0.30!1.87!ZNF280D;;chr18:3448390..3448411,+!p14@TGIF1!0.30!1.61!TGIF1;;chr14:35873101..35873119,-!p6@NFKBIA!0.30!1.61!NFKBIA;;chr8:81397876..81397898,+!p5@ZBTB10!0.30!1.34!ZBTB10;;chr15:77197753..77197772,-!p2@SCAPER!0.30!1.34!SCAPER;;chr2:191878874..191878938,-!p1@STAT1!0.29!95.78!STAT1;;chr15:35280439..35280503,-!p1@ZNF770!0.29!60.73!ZNF770;;
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=Changed from previous label. TODO: full classification
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|id=FF:11795-124C4
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|name=CD4+CD25-CD45RA+ naive conventional T cells, donor2
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|rna_box=124
|rna_catalog_number=
|rna_concentration=0.12848
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=19
|rna_od260/230=1.12
|rna_od260/280=2.06
|rna_position=C4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=124C4
|rna_weight_ug=1.2848
|sample_age=23
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=T cell
|sample_collaboration=Michael Rehli (University of Regensberg)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.2867485183338e-229!GO:0043227;membrane-bound organelle;9.20405209342131e-209!GO:0043231;intracellular membrane-bound organelle;2.02587044818302e-208!GO:0043226;organelle;9.00651438666447e-192!GO:0043229;intracellular organelle;2.49534416919298e-191!GO:0005634;nucleus;4.48081783724752e-121!GO:0005737;cytoplasm;2.06121059469533e-119!GO:0044422;organelle part;3.64726357644459e-109!GO:0043170;macromolecule metabolic process;1.61566428103924e-108!GO:0044446;intracellular organelle part;1.1884879700895e-107!GO:0044237;cellular metabolic process;8.55377373602931e-107!GO:0044238;primary metabolic process;3.1284246196012e-102!GO:0032991;macromolecular complex;2.58542669930966e-88!GO:0003723;RNA binding;2.84734364602808e-88!GO:0030529;ribonucleoprotein complex;1.97822831334703e-87!GO:0044428;nuclear part;1.91996769503982e-84!GO:0043283;biopolymer metabolic process;4.38779437121551e-81!GO:0044444;cytoplasmic part;2.13821403392538e-80!GO:0010467;gene expression;5.16024132258394e-76!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.2738955453418e-70!GO:0043233;organelle lumen;9.28079264580199e-69!GO:0031974;membrane-enclosed lumen;9.28079264580199e-69!GO:0006396;RNA processing;3.73361183558313e-60!GO:0003676;nucleic acid binding;1.9888808814519e-58!GO:0031981;nuclear lumen;9.53587023282199e-52!GO:0005739;mitochondrion;1.20048790519301e-51!GO:0006412;translation;1.78042357825315e-48!GO:0016071;mRNA metabolic process;3.60277616655865e-48!GO:0005840;ribosome;1.13124061902841e-46!GO:0016070;RNA metabolic process;2.77522444098116e-46!GO:0033036;macromolecule localization;1.82394422687385e-45!GO:0019538;protein metabolic process;5.31416866000735e-44!GO:0044267;cellular protein metabolic process;4.36669552226371e-43!GO:0015031;protein transport;4.84853810575347e-43!GO:0008380;RNA splicing;1.89470294355316e-42!GO:0044260;cellular macromolecule metabolic process;1.95782547089431e-42!GO:0005515;protein binding;1.99337073982295e-41!GO:0043234;protein complex;2.28843837778237e-41!GO:0008104;protein localization;3.64956358158258e-41!GO:0045184;establishment of protein localization;8.66335330614969e-41!GO:0006397;mRNA processing;9.94454706150853e-41!GO:0003735;structural constituent of ribosome;1.98830237685647e-40!GO:0009059;macromolecule biosynthetic process;2.12532254347348e-36!GO:0033279;ribosomal subunit;6.29109106084527e-36!GO:0044429;mitochondrial part;6.94127139532752e-36!GO:0031967;organelle envelope;1.5916936578341e-35!GO:0031090;organelle membrane;2.04325372703142e-35!GO:0031975;envelope;3.3457873819104e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.41752607327699e-33!GO:0005654;nucleoplasm;7.62961574037996e-33!GO:0006259;DNA metabolic process;6.3823181813436e-32!GO:0005681;spliceosome;2.40720573292358e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.35512413580036e-30!GO:0006886;intracellular protein transport;6.4417042328826e-30!GO:0005829;cytosol;3.55738327555362e-29!GO:0046907;intracellular transport;3.77257860546839e-29!GO:0044249;cellular biosynthetic process;1.29003841336122e-27!GO:0006512;ubiquitin cycle;2.97834411424738e-27!GO:0065003;macromolecular complex assembly;2.97834411424738e-27!GO:0016043;cellular component organization and biogenesis;6.06103221109835e-27!GO:0009058;biosynthetic process;7.19888784118439e-27!GO:0044451;nucleoplasm part;2.16907501124872e-26!GO:0044445;cytosolic part;1.21165809086431e-25!GO:0000166;nucleotide binding;3.37502913467852e-25!GO:0022607;cellular component assembly;3.74720569536331e-24!GO:0005740;mitochondrial envelope;2.20312661897522e-22!GO:0016874;ligase activity;6.0468127120801e-22!GO:0031966;mitochondrial membrane;9.97236169853993e-22!GO:0006996;organelle organization and biogenesis;1.14053840361237e-21!GO:0019866;organelle inner membrane;4.74890376054259e-21!GO:0022618;protein-RNA complex assembly;6.70964062030486e-21!GO:0005730;nucleolus;2.47289018827172e-20!GO:0015935;small ribosomal subunit;8.4097939090539e-20!GO:0051641;cellular localization;1.88319363029517e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.3492106049602e-19!GO:0016462;pyrophosphatase activity;2.67982746893996e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;2.87167085932322e-19!GO:0043412;biopolymer modification;3.03353364476911e-19!GO:0044265;cellular macromolecule catabolic process;4.43884422015683e-19!GO:0017111;nucleoside-triphosphatase activity;5.36564056778883e-19!GO:0051649;establishment of cellular localization;6.07564803816876e-19!GO:0005743;mitochondrial inner membrane;7.36004494085365e-19!GO:0016604;nuclear body;1.46154855297962e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;3.44890677731494e-18!GO:0019941;modification-dependent protein catabolic process;4.47094731816996e-18!GO:0043632;modification-dependent macromolecule catabolic process;4.47094731816996e-18!GO:0006511;ubiquitin-dependent protein catabolic process;4.50329604438573e-18!GO:0008135;translation factor activity, nucleic acid binding;5.05341475214794e-18!GO:0044257;cellular protein catabolic process;7.42915613105497e-18!GO:0006119;oxidative phosphorylation;3.31953763450156e-17!GO:0015934;large ribosomal subunit;3.64000035705959e-17!GO:0006605;protein targeting;4.87930957545806e-17!GO:0043285;biopolymer catabolic process;5.65768878306214e-17!GO:0044455;mitochondrial membrane part;1.28148843469905e-16!GO:0032553;ribonucleotide binding;1.48309015739686e-16!GO:0032555;purine ribonucleotide binding;1.48309015739686e-16!GO:0019222;regulation of metabolic process;1.51652952864208e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;1.7923982399441e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.89319596362273e-16!GO:0051276;chromosome organization and biogenesis;2.08748774142865e-16!GO:0006464;protein modification process;2.36162083280793e-16!GO:0050794;regulation of cellular process;3.34477640256332e-16!GO:0017076;purine nucleotide binding;3.50680736927279e-16!GO:0043687;post-translational protein modification;7.443416732218e-16!GO:0006323;DNA packaging;8.03812230766247e-16!GO:0016607;nuclear speck;8.66507797410006e-16!GO:0031980;mitochondrial lumen;1.26186109962455e-15!GO:0005759;mitochondrial matrix;1.26186109962455e-15!GO:0006974;response to DNA damage stimulus;1.50623123812403e-15!GO:0016887;ATPase activity;2.58398361338604e-15!GO:0043228;non-membrane-bound organelle;4.05896649499886e-15!GO:0043232;intracellular non-membrane-bound organelle;4.05896649499886e-15!GO:0008270;zinc ion binding;5.09971362570288e-15!GO:0006913;nucleocytoplasmic transport;5.60124138074838e-15!GO:0004386;helicase activity;5.66776604675838e-15!GO:0009057;macromolecule catabolic process;6.70092352857387e-15!GO:0008134;transcription factor binding;6.948842430428e-15!GO:0042623;ATPase activity, coupled;7.83032914333331e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;8.0016825689002e-15!GO:0000375;RNA splicing, via transesterification reactions;8.0016825689002e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.0016825689002e-15!GO:0051169;nuclear transport;8.80508530528069e-15!GO:0031323;regulation of cellular metabolic process;1.07251483227728e-14!GO:0006350;transcription;1.34589774494054e-14!GO:0006457;protein folding;1.79629682783989e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.30331158603083e-14!GO:0005524;ATP binding;2.58521488482142e-14!GO:0006281;DNA repair;5.57482807739979e-14!GO:0032559;adenyl ribonucleotide binding;8.28742857074176e-14!GO:0005635;nuclear envelope;9.21879220811775e-14!GO:0003743;translation initiation factor activity;1.24582575414029e-13!GO:0031965;nuclear membrane;1.47005525798871e-13!GO:0006413;translational initiation;1.96140415805808e-13!GO:0030554;adenyl nucleotide binding;2.36440248164606e-13!GO:0012505;endomembrane system;3.36542894320492e-13!GO:0010468;regulation of gene expression;3.76193093495852e-13!GO:0030163;protein catabolic process;5.08485250362886e-13!GO:0008026;ATP-dependent helicase activity;5.58515367424683e-13!GO:0042254;ribosome biogenesis and assembly;8.5970923252685e-13!GO:0044453;nuclear membrane part;9.14778654994297e-13!GO:0012501;programmed cell death;9.38861832917604e-13!GO:0006915;apoptosis;1.01976056579095e-12!GO:0016568;chromatin modification;1.0899065637188e-12!GO:0005746;mitochondrial respiratory chain;1.46348948398553e-12!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.06456985179188e-12!GO:0008219;cell death;3.54174977844792e-12!GO:0016265;death;3.54174977844792e-12!GO:0032774;RNA biosynthetic process;3.56999231859535e-12!GO:0006403;RNA localization;4.11272764627189e-12!GO:0050657;nucleic acid transport;4.36797753770219e-12!GO:0051236;establishment of RNA localization;4.36797753770219e-12!GO:0050658;RNA transport;4.36797753770219e-12!GO:0008639;small protein conjugating enzyme activity;4.65403349633615e-12!GO:0044248;cellular catabolic process;4.80321969420243e-12!GO:0006351;transcription, DNA-dependent;4.84164299882097e-12!GO:0004842;ubiquitin-protein ligase activity;6.02977684823659e-12!GO:0019787;small conjugating protein ligase activity;6.50713250131005e-12!GO:0000502;proteasome complex (sensu Eukaryota);9.8199534489195e-12!GO:0005643;nuclear pore;1.77135791963941e-11!GO:0050136;NADH dehydrogenase (quinone) activity;2.33001985408655e-11!GO:0003954;NADH dehydrogenase activity;2.33001985408655e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.33001985408655e-11!GO:0005694;chromosome;2.88254151622269e-11!GO:0006446;regulation of translational initiation;3.29359254928254e-11!GO:0046914;transition metal ion binding;4.2934377407095e-11!GO:0045449;regulation of transcription;5.2362888196316e-11!GO:0051082;unfolded protein binding;5.2362888196316e-11!GO:0007049;cell cycle;5.37282330073747e-11!GO:0017038;protein import;6.28831371163458e-11!GO:0050789;regulation of biological process;7.85550381519913e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.34403859417512e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.04839462803018e-10!GO:0048193;Golgi vesicle transport;2.06540851478793e-10!GO:0065004;protein-DNA complex assembly;2.09853479875821e-10!GO:0051028;mRNA transport;2.59485663791907e-10!GO:0006333;chromatin assembly or disassembly;2.89028357430452e-10!GO:0042775;organelle ATP synthesis coupled electron transport;3.25371684508862e-10!GO:0042773;ATP synthesis coupled electron transport;3.25371684508862e-10!GO:0006399;tRNA metabolic process;4.16996691622579e-10!GO:0006355;regulation of transcription, DNA-dependent;4.93449294637567e-10!GO:0005761;mitochondrial ribosome;5.37326332393038e-10!GO:0000313;organellar ribosome;5.37326332393038e-10!GO:0003677;DNA binding;8.37056675835486e-10!GO:0003712;transcription cofactor activity;9.74925950209896e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.08571169977373e-09!GO:0045271;respiratory chain complex I;1.08571169977373e-09!GO:0005747;mitochondrial respiratory chain complex I;1.08571169977373e-09!GO:0065002;intracellular protein transport across a membrane;1.3288439624426e-09!GO:0016881;acid-amino acid ligase activity;1.36614337836241e-09!GO:0051186;cofactor metabolic process;1.43117896347986e-09!GO:0044427;chromosomal part;1.46633973738904e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.73066405654846e-09!GO:0043566;structure-specific DNA binding;2.00727073354737e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.51390583076359e-09!GO:0016072;rRNA metabolic process;3.46611254181583e-09!GO:0046930;pore complex;3.75022951791183e-09!GO:0006364;rRNA processing;3.95009237785518e-09!GO:0009719;response to endogenous stimulus;5.30499002542519e-09!GO:0048770;pigment granule;5.71429982967477e-09!GO:0042470;melanosome;5.71429982967477e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.97983812147553e-09!GO:0032446;protein modification by small protein conjugation;1.27762622980221e-08!GO:0009259;ribonucleotide metabolic process;1.3068569840079e-08!GO:0042981;regulation of apoptosis;1.3068569840079e-08!GO:0005794;Golgi apparatus;1.7929941302002e-08!GO:0043067;regulation of programmed cell death;1.7929941302002e-08!GO:0008565;protein transporter activity;2.32213378085333e-08!GO:0009260;ribonucleotide biosynthetic process;2.50984674876743e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.6089824931655e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.84381915178372e-08!GO:0016567;protein ubiquitination;3.26793214935152e-08!GO:0019829;cation-transporting ATPase activity;3.60614771731251e-08!GO:0000785;chromatin;3.92484971109066e-08!GO:0003713;transcription coactivator activity;4.23837911873476e-08!GO:0016787;hydrolase activity;5.06909589534039e-08!GO:0000151;ubiquitin ligase complex;5.0876279878406e-08!GO:0003697;single-stranded DNA binding;5.15246036612879e-08!GO:0006164;purine nucleotide biosynthetic process;5.19528568718261e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.97580235481033e-08!GO:0006163;purine nucleotide metabolic process;9.43149091478204e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.02677508858302e-07!GO:0006732;coenzyme metabolic process;1.02950614292084e-07!GO:0022402;cell cycle process;1.30820009477433e-07!GO:0016779;nucleotidyltransferase activity;1.73374472591474e-07!GO:0051726;regulation of cell cycle;1.90975509469977e-07!GO:0009150;purine ribonucleotide metabolic process;1.97526089295435e-07!GO:0051170;nuclear import;2.01982464505978e-07!GO:0009060;aerobic respiration;2.02364265591699e-07!GO:0006366;transcription from RNA polymerase II promoter;2.8002587272889e-07!GO:0000074;regulation of progression through cell cycle;2.92186945012663e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.95909770484485e-07!GO:0006793;phosphorus metabolic process;3.12481902841382e-07!GO:0006796;phosphate metabolic process;3.12481902841382e-07!GO:0006606;protein import into nucleus;3.17703617673253e-07!GO:0016563;transcription activator activity;3.65547748261405e-07!GO:0016740;transferase activity;4.36567500168373e-07!GO:0003724;RNA helicase activity;4.50155094903354e-07!GO:0051168;nuclear export;6.76199882994235e-07!GO:0006260;DNA replication;7.85357130117059e-07!GO:0000245;spliceosome assembly;7.85357130117059e-07!GO:0015078;hydrogen ion transmembrane transporter activity;9.54653272416263e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.03542738466708e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.03542738466708e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.03542738466708e-06!GO:0016192;vesicle-mediated transport;1.08588108495212e-06!GO:0005768;endosome;1.18757691526725e-06!GO:0015986;ATP synthesis coupled proton transport;1.23864240330699e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.23864240330699e-06!GO:0045333;cellular respiration;1.49131479295617e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.57007237942256e-06!GO:0006334;nucleosome assembly;1.72745674655568e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.84573607699151e-06!GO:0016310;phosphorylation;2.18160820455912e-06!GO:0043038;amino acid activation;2.21498302722104e-06!GO:0006418;tRNA aminoacylation for protein translation;2.21498302722104e-06!GO:0043039;tRNA aminoacylation;2.21498302722104e-06!GO:0031497;chromatin assembly;2.70154074698137e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.82129304873566e-06!GO:0065007;biological regulation;3.05060568087565e-06!GO:0044432;endoplasmic reticulum part;3.73654242664281e-06!GO:0004298;threonine endopeptidase activity;3.94670073357873e-06!GO:0051188;cofactor biosynthetic process;4.31987493511677e-06!GO:0045259;proton-transporting ATP synthase complex;4.80098770877935e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.96497823539331e-06!GO:0009056;catabolic process;6.11838379418645e-06!GO:0006754;ATP biosynthetic process;6.11838379418645e-06!GO:0006753;nucleoside phosphate metabolic process;6.11838379418645e-06!GO:0016469;proton-transporting two-sector ATPase complex;7.76908692569952e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.78389329199383e-06!GO:0015399;primary active transmembrane transporter activity;7.78389329199383e-06!GO:0046034;ATP metabolic process;8.34719131239451e-06!GO:0009199;ribonucleoside triphosphate metabolic process;8.67000422778213e-06!GO:0009142;nucleoside triphosphate biosynthetic process;9.29574806283057e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.29574806283057e-06!GO:0008186;RNA-dependent ATPase activity;1.1700334280114e-05!GO:0009141;nucleoside triphosphate metabolic process;1.19356917523143e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.22918411781548e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.22918411781548e-05!GO:0006099;tricarboxylic acid cycle;1.33332855162764e-05!GO:0046356;acetyl-CoA catabolic process;1.33332855162764e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.33332855162764e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.33332855162764e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.37186336234366e-05!GO:0006401;RNA catabolic process;1.50804564816579e-05!GO:0008234;cysteine-type peptidase activity;1.96303948090479e-05!GO:0051246;regulation of protein metabolic process;2.00538088615707e-05!GO:0003690;double-stranded DNA binding;2.12559070749697e-05!GO:0005789;endoplasmic reticulum membrane;2.28785282885742e-05!GO:0006084;acetyl-CoA metabolic process;2.33298723130118e-05!GO:0006613;cotranslational protein targeting to membrane;2.37284750638959e-05!GO:0007005;mitochondrion organization and biogenesis;2.45281419724064e-05!GO:0006402;mRNA catabolic process;3.24388245274964e-05!GO:0009108;coenzyme biosynthetic process;3.41967511960898e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.43511549117379e-05!GO:0006916;anti-apoptosis;3.46713482131899e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.56079770219189e-05!GO:0016363;nuclear matrix;3.75822510357237e-05!GO:0019899;enzyme binding;3.83846803187927e-05!GO:0004004;ATP-dependent RNA helicase activity;3.95983121605592e-05!GO:0007243;protein kinase cascade;3.96254013191319e-05!GO:0045786;negative regulation of progression through cell cycle;3.9778413655681e-05!GO:0005783;endoplasmic reticulum;4.02863681561555e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.41153328342034e-05!GO:0030120;vesicle coat;4.64342939322746e-05!GO:0030662;coated vesicle membrane;4.64342939322746e-05!GO:0031324;negative regulation of cellular metabolic process;5.56138894529185e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.9193663226894e-05!GO:0043623;cellular protein complex assembly;6.36394312287203e-05!GO:0008168;methyltransferase activity;7.66199128474303e-05!GO:0016741;transferase activity, transferring one-carbon groups;8.04123278699475e-05!GO:0009109;coenzyme catabolic process;9.58414277216517e-05!GO:0043069;negative regulation of programmed cell death;9.62069161542365e-05!GO:0044431;Golgi apparatus part;9.62522903966678e-05!GO:0016564;transcription repressor activity;9.75505743854875e-05!GO:0065009;regulation of a molecular function;9.77829188728589e-05!GO:0005667;transcription factor complex;9.97659109462401e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000101514623883425!GO:0048523;negative regulation of cellular process;0.000107312507465446!GO:0008033;tRNA processing;0.00010928794014272!GO:0003899;DNA-directed RNA polymerase activity;0.000118321615697943!GO:0016251;general RNA polymerase II transcription factor activity;0.000125115647366631!GO:0005813;centrosome;0.000130472426667253!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000132130548246346!GO:0048475;coated membrane;0.000132130548246346!GO:0030117;membrane coat;0.000132130548246346!GO:0009055;electron carrier activity;0.000136052666694948!GO:0043066;negative regulation of apoptosis;0.000136052666694948!GO:0043492;ATPase activity, coupled to movement of substances;0.000142742107502904!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000144959175015684!GO:0006612;protein targeting to membrane;0.000145455606132428!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000154255063852085!GO:0003729;mRNA binding;0.000165369014252045!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000180835806283456!GO:0006461;protein complex assembly;0.000197720756965572!GO:0006752;group transfer coenzyme metabolic process;0.000198877509762819!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000208161233728696!GO:0006310;DNA recombination;0.000213004706813957!GO:0005793;ER-Golgi intermediate compartment;0.000251957196323337!GO:0043021;ribonucleoprotein binding;0.000255340840697204!GO:0006352;transcription initiation;0.000259515784088042!GO:0051187;cofactor catabolic process;0.00026488331361225!GO:0008654;phospholipid biosynthetic process;0.000285198795234678!GO:0006383;transcription from RNA polymerase III promoter;0.000294578036170445!GO:0019783;small conjugating protein-specific protease activity;0.000329955103555313!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000348911064560085!GO:0005525;GTP binding;0.000351788721604012!GO:0016481;negative regulation of transcription;0.000352346691976543!GO:0004674;protein serine/threonine kinase activity;0.000353966014206713!GO:0030384;phosphoinositide metabolic process;0.00037276788503678!GO:0006261;DNA-dependent DNA replication;0.000383503294550864!GO:0006891;intra-Golgi vesicle-mediated transport;0.000383515460152216!GO:0009892;negative regulation of metabolic process;0.000444479580408271!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000453741984850577!GO:0005815;microtubule organizing center;0.000484173702341444!GO:0004843;ubiquitin-specific protease activity;0.000491264233971309!GO:0044440;endosomal part;0.000491323347868794!GO:0010008;endosome membrane;0.000491323347868794!GO:0005885;Arp2/3 protein complex;0.000495893807478532!GO:0060090;molecular adaptor activity;0.000631537488273408!GO:0004221;ubiquitin thiolesterase activity;0.000662208798652236!GO:0051427;hormone receptor binding;0.000685365872444354!GO:0044452;nucleolar part;0.000722144018427571!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000759582171209946!GO:0046489;phosphoinositide biosynthetic process;0.000784555841295655!GO:0032259;methylation;0.00081880150360803!GO:0006917;induction of apoptosis;0.00083247265669601!GO:0006611;protein export from nucleus;0.000863065863809233!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00087531755743623!GO:0019843;rRNA binding;0.000899404473943189!GO:0031072;heat shock protein binding;0.000943901407356674!GO:0006607;NLS-bearing substrate import into nucleus;0.000943901407356674!GO:0043681;protein import into mitochondrion;0.000972403664444025!GO:0006405;RNA export from nucleus;0.000980399093235079!GO:0003924;GTPase activity;0.000988904797842294!GO:0005769;early endosome;0.00104350580687347!GO:0048519;negative regulation of biological process;0.00109214395251945!GO:0051539;4 iron, 4 sulfur cluster binding;0.00109590751844449!GO:0012502;induction of programmed cell death;0.00113429530086332!GO:0035257;nuclear hormone receptor binding;0.00114253749667806!GO:0005762;mitochondrial large ribosomal subunit;0.00114388598514336!GO:0000315;organellar large ribosomal subunit;0.00114388598514336!GO:0006818;hydrogen transport;0.00115531338432471!GO:0000314;organellar small ribosomal subunit;0.00115993952500844!GO:0005763;mitochondrial small ribosomal subunit;0.00115993952500844!GO:0009117;nucleotide metabolic process;0.00126995950340751!GO:0006650;glycerophospholipid metabolic process;0.00132172186625332!GO:0000139;Golgi membrane;0.00134236547974502!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0013757611411843!GO:0004527;exonuclease activity;0.00141308599522955!GO:0015992;proton transport;0.00141509534907082!GO:0005770;late endosome;0.00164924685599049!GO:0004518;nuclease activity;0.00170745380240195!GO:0005773;vacuole;0.00183335080953082!GO:0000278;mitotic cell cycle;0.00191539876196096!GO:0043414;biopolymer methylation;0.00195904544655938!GO:0003746;translation elongation factor activity;0.00196140566081604!GO:0005798;Golgi-associated vesicle;0.00197205797536595!GO:0015631;tubulin binding;0.00204653652497968!GO:0006414;translational elongation;0.00207752017502031!GO:0031625;ubiquitin protein ligase binding;0.00218565147918407!GO:0019867;outer membrane;0.00219978942133746!GO:0000786;nucleosome;0.00223924582474168!GO:0016790;thiolester hydrolase activity;0.00225250000969055!GO:0046474;glycerophospholipid biosynthetic process;0.00234273172861697!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.002378358921914!GO:0006417;regulation of translation;0.00241256559901233!GO:0003678;DNA helicase activity;0.00258321585933902!GO:0005684;U2-dependent spliceosome;0.00261120599903332!GO:0043065;positive regulation of apoptosis;0.00266904656451112!GO:0048500;signal recognition particle;0.00276287183472837!GO:0051252;regulation of RNA metabolic process;0.00278430064942546!GO:0008632;apoptotic program;0.00292917071912249!GO:0051087;chaperone binding;0.00306812415347271!GO:0006289;nucleotide-excision repair;0.00307920070224502!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00308209898161541!GO:0031968;organelle outer membrane;0.00308247143921102!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00310229078828085!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00310229078828085!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00310229078828085!GO:0032561;guanyl ribonucleotide binding;0.00311476908676674!GO:0019001;guanyl nucleotide binding;0.00311476908676674!GO:0005741;mitochondrial outer membrane;0.00335654070743636!GO:0008312;7S RNA binding;0.00335654070743636!GO:0009615;response to virus;0.00337538194495305!GO:0006338;chromatin remodeling;0.00337867383917297!GO:0007242;intracellular signaling cascade;0.00347786935679758!GO:0043068;positive regulation of programmed cell death;0.00357710473116628!GO:0000323;lytic vacuole;0.00365523700309919!GO:0005764;lysosome;0.00365523700309919!GO:0003682;chromatin binding;0.00366897141968544!GO:0007006;mitochondrial membrane organization and biogenesis;0.00388179582347194!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00397916770031642!GO:0004532;exoribonuclease activity;0.0040128647492562!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0040128647492562!GO:0032200;telomere organization and biogenesis;0.0040128647492562!GO:0000723;telomere maintenance;0.0040128647492562!GO:0042101;T cell receptor complex;0.0042626423512567!GO:0007265;Ras protein signal transduction;0.00438121322839385!GO:0016197;endosome transport;0.00438799382316049!GO:0051540;metal cluster binding;0.00439562501313769!GO:0051536;iron-sulfur cluster binding;0.00439562501313769!GO:0031326;regulation of cellular biosynthetic process;0.00440248532878016!GO:0016584;nucleosome positioning;0.00448708436576298!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00464436426167639!GO:0045047;protein targeting to ER;0.00464436426167639!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00492748667497632!GO:0008017;microtubule binding;0.00496097768016309!GO:0008022;protein C-terminus binding;0.00498868662731577!GO:0005637;nuclear inner membrane;0.00514666049264521!GO:0030518;steroid hormone receptor signaling pathway;0.00514843499199254!GO:0005669;transcription factor TFIID complex;0.00518606117767196!GO:0000209;protein polyubiquitination;0.00579449595420716!GO:0043488;regulation of mRNA stability;0.00598111749875762!GO:0043487;regulation of RNA stability;0.00598111749875762!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00598519660526168!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00656857242920447!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00656857242920447!GO:0048471;perinuclear region of cytoplasm;0.00658144874634397!GO:0005083;small GTPase regulator activity;0.00666552354755226!GO:0008408;3'-5' exonuclease activity;0.00679661627392483!GO:0030695;GTPase regulator activity;0.00685199730078447!GO:0006497;protein amino acid lipidation;0.00719073992470534!GO:0022890;inorganic cation transmembrane transporter activity;0.00752885946962875!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00848442485627667!GO:0006626;protein targeting to mitochondrion;0.00867025862973351!GO:0007264;small GTPase mediated signal transduction;0.00871546032939782!GO:0006839;mitochondrial transport;0.00874583295753843!GO:0006302;double-strand break repair;0.00897810892021287!GO:0003711;transcription elongation regulator activity;0.00919939730654697!GO:0030258;lipid modification;0.00938433453548059!GO:0050790;regulation of catalytic activity;0.00966490737876536!GO:0005070;SH3/SH2 adaptor activity;0.00984557007987936!GO:0008276;protein methyltransferase activity;0.0100341827146934!GO:0040029;regulation of gene expression, epigenetic;0.0100341827146934!GO:0030521;androgen receptor signaling pathway;0.0100341827146934!GO:0047485;protein N-terminus binding;0.0100341827146934!GO:0046966;thyroid hormone receptor binding;0.010111727915641!GO:0046467;membrane lipid biosynthetic process;0.010658239859461!GO:0000049;tRNA binding;0.0108293995358138!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0108911377820308!GO:0003725;double-stranded RNA binding;0.0110028370909517!GO:0044438;microbody part;0.0110028370909517!GO:0044439;peroxisomal part;0.0110028370909517!GO:0009165;nucleotide biosynthetic process;0.0110267609818187!GO:0016788;hydrolase activity, acting on ester bonds;0.0111028522192716!GO:0006506;GPI anchor biosynthetic process;0.011698339540518!GO:0031461;cullin-RING ubiquitin ligase complex;0.0118524922290185!GO:0005774;vacuolar membrane;0.0119003326515479!GO:0003684;damaged DNA binding;0.0119839556335262!GO:0008047;enzyme activator activity;0.0120283560541043!GO:0003714;transcription corepressor activity;0.0120884163871704!GO:0000781;chromosome, telomeric region;0.0122661679392225!GO:0030522;intracellular receptor-mediated signaling pathway;0.0126959564106572!GO:0016859;cis-trans isomerase activity;0.0127036717885639!GO:0006376;mRNA splice site selection;0.0127036717885639!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0127036717885639!GO:0008097;5S rRNA binding;0.0130672877119987!GO:0030880;RNA polymerase complex;0.0133903533025243!GO:0030658;transport vesicle membrane;0.0134905962550476!GO:0000059;protein import into nucleus, docking;0.0134905962550476!GO:0048487;beta-tubulin binding;0.0135689244317835!GO:0051789;response to protein stimulus;0.0136888167599274!GO:0006986;response to unfolded protein;0.0136888167599274!GO:0007004;telomere maintenance via telomerase;0.0137393867367393!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0137523166421706!GO:0015980;energy derivation by oxidation of organic compounds;0.0149115370604783!GO:0050852;T cell receptor signaling pathway;0.0151614085920415!GO:0016853;isomerase activity;0.0152932849014522!GO:0051301;cell division;0.0154778514768289!GO:0006505;GPI anchor metabolic process;0.0155120820193149!GO:0045892;negative regulation of transcription, DNA-dependent;0.0157653414738234!GO:0005048;signal sequence binding;0.0161484327047625!GO:0043087;regulation of GTPase activity;0.0162673452149323!GO:0042110;T cell activation;0.0166320047962625!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0166320047962625!GO:0015002;heme-copper terminal oxidase activity;0.0166320047962625!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0166320047962625!GO:0004129;cytochrome-c oxidase activity;0.0166320047962625!GO:0016272;prefoldin complex;0.01665495916234!GO:0000178;exosome (RNase complex);0.0176556302732169!GO:0001772;immunological synapse;0.0176556302732169!GO:0000119;mediator complex;0.0189002694408137!GO:0009161;ribonucleoside monophosphate metabolic process;0.0190499248807511!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0190499248807511!GO:0009889;regulation of biosynthetic process;0.0190913626776746!GO:0009116;nucleoside metabolic process;0.0193724423102991!GO:0031903;microbody membrane;0.0193773336770597!GO:0005778;peroxisomal membrane;0.0193773336770597!GO:0008287;protein serine/threonine phosphatase complex;0.0194520566577748!GO:0009112;nucleobase metabolic process;0.0197832738753976!GO:0008624;induction of apoptosis by extracellular signals;0.0197832738753976!GO:0022406;membrane docking;0.0197832738753976!GO:0048278;vesicle docking;0.0197832738753976!GO:0005765;lysosomal membrane;0.0198972279344576!GO:0008139;nuclear localization sequence binding;0.0203423320251033!GO:0042158;lipoprotein biosynthetic process;0.0204225588034876!GO:0004722;protein serine/threonine phosphatase activity;0.0204463268153835!GO:0045603;positive regulation of endothelial cell differentiation;0.0204755837158832!GO:0000738;DNA catabolic process, exonucleolytic;0.0207159013269599!GO:0005521;lamin binding;0.0208797865581174!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0208797865581174!GO:0000428;DNA-directed RNA polymerase complex;0.0208797865581174!GO:0022415;viral reproductive process;0.0217498547532384!GO:0016585;chromatin remodeling complex;0.0223701863523696!GO:0051052;regulation of DNA metabolic process;0.0225130022362491!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0225735139498542!GO:0044437;vacuolar part;0.0226257473527704!GO:0050811;GABA receptor binding;0.0227313249379109!GO:0006904;vesicle docking during exocytosis;0.0229913949859414!GO:0001667;ameboidal cell migration;0.0234659326561339!GO:0032027;myosin light chain binding;0.0234659326561339!GO:0007050;cell cycle arrest;0.0238491330403894!GO:0004197;cysteine-type endopeptidase activity;0.0241908318917828!GO:0033116;ER-Golgi intermediate compartment membrane;0.0241908318917828!GO:0030118;clathrin coat;0.0245546085528714!GO:0043022;ribosome binding;0.0246868924803703!GO:0042393;histone binding;0.0256521126898289!GO:0030137;COPI-coated vesicle;0.0260043729379321!GO:0006278;RNA-dependent DNA replication;0.0260382213168503!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0260382213168503!GO:0000175;3'-5'-exoribonuclease activity;0.0263218952313168!GO:0003702;RNA polymerase II transcription factor activity;0.0263690018532989!GO:0043621;protein self-association;0.0263690018532989!GO:0016301;kinase activity;0.0264867490851342!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0264867490851342!GO:0010257;NADH dehydrogenase complex assembly;0.0264867490851342!GO:0033108;mitochondrial respiratory chain complex assembly;0.0264867490851342!GO:0016569;covalent chromatin modification;0.0264867490851342!GO:0006013;mannose metabolic process;0.0265570225587362!GO:0030660;Golgi-associated vesicle membrane;0.0273266663717198!GO:0032508;DNA duplex unwinding;0.0273277767881434!GO:0032392;DNA geometric change;0.0273277767881434!GO:0016570;histone modification;0.0279806599060752!GO:0006406;mRNA export from nucleus;0.0281731754007674!GO:0005869;dynactin complex;0.0283914276359406!GO:0005657;replication fork;0.028397169454945!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0286614073557313!GO:0051336;regulation of hydrolase activity;0.028838609677822!GO:0031647;regulation of protein stability;0.028909494379901!GO:0030663;COPI coated vesicle membrane;0.029327643731881!GO:0030126;COPI vesicle coat;0.029327643731881!GO:0005777;peroxisome;0.0298976089211344!GO:0042579;microbody;0.0298976089211344!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0300638238555666!GO:0000726;non-recombinational repair;0.0303664699483119!GO:0016763;transferase activity, transferring pentosyl groups;0.0303664699483119!GO:0042608;T cell receptor binding;0.0303664699483119!GO:0000287;magnesium ion binding;0.0317708869265333!GO:0000776;kinetochore;0.0317708869265333!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0320062812249238!GO:0016605;PML body;0.0323491530786783!GO:0016279;protein-lysine N-methyltransferase activity;0.0333341719215217!GO:0018024;histone-lysine N-methyltransferase activity;0.0333341719215217!GO:0016278;lysine N-methyltransferase activity;0.0333341719215217!GO:0000118;histone deacetylase complex;0.0335621204008677!GO:0022403;cell cycle phase;0.0338150376661625!GO:0006914;autophagy;0.0340427119381317!GO:0031124;mRNA 3'-end processing;0.0344438639850405!GO:0008320;protein transmembrane transporter activity;0.0345227223055412!GO:0046822;regulation of nucleocytoplasmic transport;0.0347114595782689!GO:0048002;antigen processing and presentation of peptide antigen;0.0349742362066827!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0351167594279423!GO:0008094;DNA-dependent ATPase activity;0.0356496973508223!GO:0006595;polyamine metabolic process;0.0356550440097274!GO:0046854;phosphoinositide phosphorylation;0.0361299074266123!GO:0016791;phosphoric monoester hydrolase activity;0.0365298044663863!GO:0051251;positive regulation of lymphocyte activation;0.0366958315901033!GO:0000090;mitotic anaphase;0.0366958315901033!GO:0051322;anaphase;0.0366958315901033!GO:0009451;RNA modification;0.036806358689598!GO:0005832;chaperonin-containing T-complex;0.0371287524402966!GO:0004659;prenyltransferase activity;0.0379791035424667!GO:0045947;negative regulation of translational initiation;0.038852870952269!GO:0009967;positive regulation of signal transduction;0.0391828777596104!GO:0015923;mannosidase activity;0.0391916664198596!GO:0004402;histone acetyltransferase activity;0.0397006289925553!GO:0004468;lysine N-acetyltransferase activity;0.0397006289925553!GO:0008180;signalosome;0.0397070690052201!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0406111126138754!GO:0046426;negative regulation of JAK-STAT cascade;0.0406992943973269!GO:0019901;protein kinase binding;0.0407441689069076!GO:0050870;positive regulation of T cell activation;0.040878116326959!GO:0004003;ATP-dependent DNA helicase activity;0.0409534515374027!GO:0030833;regulation of actin filament polymerization;0.041110269334342!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0411171496871316!GO:0015630;microtubule cytoskeleton;0.0412986213723682!GO:0046834;lipid phosphorylation;0.0416524604436797!GO:0031123;RNA 3'-end processing;0.0418930620401419!GO:0008213;protein amino acid alkylation;0.0433562446792237!GO:0006479;protein amino acid methylation;0.0433562446792237!GO:0007034;vacuolar transport;0.0434470850513718!GO:0042802;identical protein binding;0.0434470850513718!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0441315258039144!GO:0008173;RNA methyltransferase activity;0.0441315258039144!GO:0000123;histone acetyltransferase complex;0.0442236224594337!GO:0031902;late endosome membrane;0.0444130093741487!GO:0002378;immunoglobulin biosynthetic process;0.0452786312413382!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0452786312413382!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0452786312413382!GO:0022884;macromolecule transmembrane transporter activity;0.0452786312413382!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0452786312413382!GO:0019904;protein domain specific binding;0.0456924516773381!GO:0051235;maintenance of localization;0.046317773837022!GO:0006301;postreplication repair;0.0467265809146307!GO:0000087;M phase of mitotic cell cycle;0.0470783546396147!GO:0030127;COPII vesicle coat;0.0472343336197645!GO:0012507;ER to Golgi transport vesicle membrane;0.0472343336197645!GO:0006144;purine base metabolic process;0.0472343336197645!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0480155412510842!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0486259037179254!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0486259037179254!GO:0009126;purine nucleoside monophosphate metabolic process;0.0486259037179254!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0486259037179254!GO:0051920;peroxiredoxin activity;0.0489954884202973!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0491505455132978!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0491505455132978!GO:0051452;cellular pH reduction;0.0493722432664836!GO:0051453;regulation of cellular pH;0.0493722432664836!GO:0045851;pH reduction;0.0493722432664836!GO:0035258;steroid hormone receptor binding;0.0498552555153776
|sample_id=11795
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=FOX{D1,D2}:2.93005688477;PAX3,7:2.92016393468;CREB1:2.69351842472;CDX1,2,4:2.5232822633;BPTF:2.43220276335;RUNX1..3:2.31411520212;ELF1,2,4:2.23323208591;PDX1:2.20101749793;FOXO1,3,4:2.05190339211;RFX2..5_RFXANK_RFXAP:1.87451143445;ATF5_CREB3:1.72666350361;DMAP1_NCOR{1,2}_SMARC:1.7103464691;ETS1,2:1.6894328694;ZBTB16:1.62366683761;ATF4:1.52352719418;ELK1,4_GABP{A,B1}:1.51541619938;FOX{F1,F2,J1}:1.46469356749;PBX1:1.45694148141;TLX2:1.44240227443;FOXN1:1.43957077285;PAX6:1.40062401815;HMX1:1.36909432893;NKX6-1,2:1.31462835487;RFX1:1.28963932912;LEF1_TCF7_TCF7L1,2:1.22656809582;BREu{core}:1.18056985685;PAX4:1.17007577589;FOX{I1,J2}:1.16714691222;TGIF1:1.14928775643;IKZF2:1.12948426809;T:1.06578309993;RORA:1.03741659064;PITX1..3:1.02002067862;IRF1,2:0.979443796054;ATF2:0.963621359147;HIF1A:0.939590026384;SPI1:0.936491365493;FOXP1:0.889447091645;GATA6:0.877146613259;NKX2-1,4:0.832305829431;ZEB1:0.814529737442;SPIB:0.805751597996;AHR_ARNT_ARNT2:0.798921455358;PAX2:0.785117223317;STAT1,3:0.717060467434;SPZ1:0.669537226381;SOX2:0.668475057144;JUN:0.634286186835;YY1:0.633983482302;SOX5:0.61647100339;HBP1_HMGB_SSRP1_UBTF:0.584676449299;NFIX:0.495703043176;CUX2:0.40848820673;NRF1:0.393592801036;IRF7:0.360866364339;SNAI1..3:0.358910660914;ATF6:0.347018198135;STAT5{A,B}:0.320408720821;HOX{A6,A7,B6,B7}:0.214508931499;ALX1:0.19780755143;FOXQ1:0.172975387673;LMO2:0.162131019034;POU1F1:0.155291885316;NKX3-1:0.154924218639;CRX:0.128109406626;NANOG:0.119190437282;NKX2-2,8:0.105120280167;SREBF1,2:0.0751164301254;NFIL3:0.0208621517317;NANOG{mouse}:0.00481240226462;NR5A1,2:0.000332032836471;FOXA2:-0.0236776298714;NFKB1_REL_RELA:-0.0433275716769;TAL1_TCF{3,4,12}:-0.0439716642694;OCT4_SOX2{dimer}:-0.045912028422;MAFB:-0.060596543082;ZNF143:-0.0696951942102;FOXD3:-0.104203051777;POU2F1..3:-0.123459122797;VSX1,2:-0.15684378263;MYB:-0.160922216848;HOXA9_MEIS1:-0.192588775165;NFATC1..3:-0.195032406492;NFE2L1:-0.19688818225;AIRE:-0.211314945546;HES1:-0.223924231005;EVI1:-0.226454825494;RBPJ:-0.237210395583;EP300:-0.23743065682;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.247059463247;MYOD1:-0.247447960702;POU3F1..4:-0.252626685675;EGR1..3:-0.299980665796;NFY{A,B,C}:-0.326172835198;HNF1A:-0.331730742934;PRRX1,2:-0.35622285164;AR:-0.359785473946;TOPORS:-0.384760938598;E2F1..5:-0.390889144058;DBP:-0.44669932238;HNF4A_NR2F1,2:-0.479833861598;MYFfamily:-0.485758203194;ADNP_IRX_SIX_ZHX:-0.491980616639;HAND1,2:-0.520430492921;NHLH1,2:-0.523697300141;PAX5:-0.530073900283;TBX4,5:-0.564205988693;FOSL2:-0.592644923482;GLI1..3:-0.607548299632;SMAD1..7,9:-0.618758320788;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.620257951018;STAT2,4,6:-0.63293325455;MEF2{A,B,C,D}:-0.661411903768;HLF:-0.680080224187;RREB1:-0.692938421083;CEBPA,B_DDIT3:-0.701677073576;ARID5B:-0.70236307866;HMGA1,2:-0.70369721461;PAX8:-0.721357941495;GFI1:-0.733780292954;SOX{8,9,10}:-0.797173444169;GFI1B:-0.800943671578;SOX17:-0.802541979293;BACH2:-0.81128557543;FOS_FOS{B,L1}_JUN{B,D}:-0.817367971341;NR6A1:-0.823987291285;MZF1:-0.844335751778;MED-1{core}:-0.857996687427;ZFP161:-0.869932218219;PPARG:-0.944436204403;MYBL2:-0.961464472357;FOXP3:-0.975655553556;ALX4:-0.977587653042;GCM1,2:-0.986551566575;FOXM1:-0.989429009513;XBP1:-0.994936076933;MTE{core}:-1.00500041061;REST:-1.02587286585;ZNF148:-1.03044424942;NFE2:-1.04941565319;MTF1:-1.0512290803;ZNF238:-1.06087381708;bHLH_family:-1.07500398945;PRDM1:-1.09185974455;ZNF384:-1.10623822557;ZBTB6:-1.11991416357;LHX3,4:-1.15651090625;FOXL1:-1.19786963642;POU6F1:-1.19922844422;SRF:-1.24061226836;UFEwm:-1.24360673292;TP53:-1.25808846203;PATZ1:-1.28404147063;GATA4:-1.30107185301;EBF1:-1.32144269819;NKX2-3_NKX2-5:-1.34028846867;NR3C1:-1.3702676998;MAZ:-1.37040302205;RXRA_VDR{dimer}:-1.37921587081;ZNF423:-1.39949257197;HOX{A5,B5}:-1.41513014979;TEF:-1.43558693329;RXR{A,B,G}:-1.46423239446;NFE2L2:-1.4847002929;NKX3-2:-1.52342357414;TFAP4:-1.52700088051;POU5F1:-1.55639313108;GZF1:-1.55820297352;KLF4:-1.57539892594;GTF2I:-1.58431052319;GTF2A1,2:-1.59340640091;HIC1:-1.60517181087;ONECUT1,2:-1.60736489426;EN1,2:-1.62324825975;XCPE1{core}:-1.62435236951;CDC5L:-1.62831640872;HOX{A4,D4}:-1.64748392722;TLX1..3_NFIC{dimer}:-1.65510596907;TEAD1:-1.66585816441;SP1:-1.72047437232;TFCP2:-1.74062642933;NR1H4:-1.76521008971;TFDP1:-1.79681872617;TFAP2B:-1.80389402151;ESR1:-1.80920256331;ZIC1..3:-1.90275139874;TFAP2{A,C}:-1.94995601265;PAX1,9:-2.07298515544;ESRRA:-2.11534147052;TBP:-2.19430180858;HSF1,2:-2.38434276843;IKZF1:-2.7250353178
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11795-124C4;search_select_hide=table117:FF:11795-124C4
}}
}}

Latest revision as of 18:20, 4 June 2020

Name:CD4+CD25-CD45RA+ naive conventional T cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13205
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age23
cell typeT cell
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number19
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005585
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13205 CAGE DRX008191 DRR009063
Accession ID Hg19

Library idBAMCTSS
CNhs13205 DRZ000488 DRZ001873
Accession ID Hg38

Library idBAMCTSS
CNhs13205 DRZ011838 DRZ013223
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.103
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.129
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.26
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.186
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.339
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.186
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.15
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.676
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.499
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.942
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.189
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.126
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.103
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.458
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.109
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.7
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.186
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.538
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.593
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.103
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.72
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.977
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.744
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.596
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.606
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.466
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.744
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.103
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.988
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.186
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13205

Jaspar motifP-value
MA0002.22.24458e-4
MA0003.10.421
MA0004.10.814
MA0006.10.0933
MA0007.10.91
MA0009.10.471
MA0014.10.489
MA0017.10.931
MA0018.21.24079e-5
MA0019.10.635
MA0024.10.476
MA0025.10.955
MA0027.10.798
MA0028.17.94075e-6
MA0029.10.367
MA0030.10.0303
MA0031.14.16603e-4
MA0035.20.291
MA0038.10.0676
MA0039.20.739
MA0040.10.384
MA0041.10.304
MA0042.10.835
MA0043.10.242
MA0046.10.428
MA0047.20.132
MA0048.10.724
MA0050.12.38699e-4
MA0051.10.0147
MA0052.10.00756
MA0055.10.909
MA0057.10.55
MA0058.10.836
MA0059.10.667
MA0060.10.182
MA0061.10.434
MA0062.21.88808e-17
MA0065.20.354
MA0066.10.877
MA0067.10.189
MA0068.10.939
MA0069.10.9
MA0070.10.562
MA0071.10.886
MA0072.10.644
MA0073.10.943
MA0074.10.353
MA0076.15.66826e-9
MA0077.10.0515
MA0078.10.736
MA0079.20.409
MA0080.21.82871e-9
MA0081.10.0167
MA0083.10.00164
MA0084.10.208
MA0087.10.714
MA0088.10.118
MA0090.15.05082e-4
MA0091.10.547
MA0092.10.712
MA0093.10.952
MA0099.21.56356e-9
MA0100.10.596
MA0101.10.225
MA0102.20.482
MA0103.10.138
MA0104.20.065
MA0105.10.00943
MA0106.10.14
MA0107.10.124
MA0108.21.21024e-12
MA0111.10.169
MA0112.20.746
MA0113.10.656
MA0114.10.999
MA0115.10.859
MA0116.10.00546
MA0117.10.225
MA0119.10.721
MA0122.10.478
MA0124.10.581
MA0125.10.128
MA0131.10.0575
MA0135.10.183
MA0136.17.79893e-21
MA0137.20.831
MA0138.20.212
MA0139.10.1
MA0140.10.252
MA0141.10.302
MA0142.10.0902
MA0143.10.181
MA0144.10.597
MA0145.10.0446
MA0146.10.69
MA0147.10.0838
MA0148.10.383
MA0149.10.188
MA0150.10.0294
MA0152.10.00584
MA0153.10.612
MA0154.10.42
MA0155.10.297
MA0156.11.93967e-19
MA0157.13.38371e-4
MA0159.10.541
MA0160.10.515
MA0162.10.308
MA0163.14.20868e-6
MA0164.10.942
MA0258.10.766
MA0259.10.118



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13205

Novel motifP-value
10.432
100.0133
1000.478
1010.172
1020.896
1030.701
1040.941
1050.568
1060.826
1070.00296
1080.4
1090.311
110.3
1100.947
1110.528
1120.85
1130.427
1140.507
1150.112
1160.331
1170.002
1180.281
1190.233
120.708
1200.873
1210.848
1220.936
1234.11276e-5
1240.403
1250.78
1260.801
1270.84
1280.535
1290.556
130.644
1300.366
1310.287
1320.568
1330.533
1340.411
1350.923
1360.729
1370.0711
1380.304
1390.061
140.653
1400.158
1410.463
1420.278
1430.026
1440.753
1450.841
1460.675
1470.011
1480.468
1490.369
150.288
1500.945
1510.623
1520.16
1530.791
1540.303
1550.0271
1560.909
1570.324
1580.0191
1590.448
160.418
1600.414
1610.591
1620.174
1630.481
1640.0935
1650.657
1660.481
1670.0537
1680.939
1690.188
170.495
180.632
190.0686
20.345
200.426
210.533
220.348
230.207
240.636
250.0986
260.849
270.548
280.621
290.0221
30.143
300.0929
310.662
320.0214
330.218
340.321
350.139
360.0237
370.355
380.854
390.207
40.771
400.852
410.249
420.124
430.576
440.999
450.244
460.514
470.158
480.377
490.13
50.476
500.43
510.908
520.22
530.492
540.967
550.522
560.992
570.561
580.17
590.437
60.76
600.949
610.0721
620.2
630.916
640.587
650.558
660.64
670.74
680.414
690.986
70.462
700.035
710.147
720.173
730.715
740.593
750.0114
760.0721
770.0235
780.668
790.583
80.806
800.0325
810.314
820.251
830.766
840.618
850.377
860.314
870.648
880.942
890.0532
90.702
900.0267
910.621
920.897
930.72
940.294
950.3
960.391
970.358
980.199
990.00114



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13205


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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