FF:11798-124C7: Difference between revisions

Latest revision as of 18:21, 4 June 2020

Name:	CD4+CD25-CD45RA- memory conventional T cells, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs13237
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	male
age	23
cell type	T cell
cell line	NA
company	NA
collaboration	Michael Rehli (University of Regensberg)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	25
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004816

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13237		CAGE		DRX008063		DRR008935

Accession ID Hg19

Library id		BAM		CTSS
CNhs13237		DRZ000360		DRZ001745

Accession ID Hg38

Library id		BAM		CTSS
CNhs13237		DRZ011710		DRZ013095

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.612
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.168
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.205
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.227
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.571
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.167
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.486
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.728
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.384
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.856
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.401
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.256
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.308
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.71
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.379
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.813
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.434
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.189
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.423
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.308
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.187
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.877
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.128
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.375
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.764
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.861
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.616
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.736
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.941
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.376
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.915
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.434
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0.227
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.376
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13237

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	1.0602e-6
MA0003.1	MA0003.1	0.621
MA0004.1	MA0004.1	0.86
MA0006.1	MA0006.1	0.114
MA0007.1	MA0007.1	0.641
MA0009.1	MA0009.1	0.141
MA0014.1	MA0014.1	0.507
MA0017.1	MA0017.1	0.898
MA0018.2	MA0018.2	2.42761e-9
MA0019.1	MA0019.1	0.476
MA0024.1	MA0024.1	0.492
MA0025.1	MA0025.1	0.0928
MA0027.1	MA0027.1	0.709
MA0028.1	MA0028.1	6.3011e-6
MA0029.1	MA0029.1	0.398
MA0030.1	MA0030.1	3.2401e-4
MA0031.1	MA0031.1	1.50525e-5
MA0035.2	MA0035.2	0.126
MA0038.1	MA0038.1	0.161
MA0039.2	MA0039.2	0.815
MA0040.1	MA0040.1	0.679
MA0041.1	MA0041.1	0.88
MA0042.1	MA0042.1	0.396
MA0043.1	MA0043.1	0.00128
MA0046.1	MA0046.1	0.27
MA0047.2	MA0047.2	0.0162
MA0048.1	MA0048.1	0.871
MA0050.1	MA0050.1	2.39333e-8
MA0051.1	MA0051.1	1.55356e-4
MA0052.1	MA0052.1	0.00705
MA0055.1	MA0055.1	0.775
MA0057.1	MA0057.1	0.508
MA0058.1	MA0058.1	0.658
MA0059.1	MA0059.1	0.656
MA0060.1	MA0060.1	0.502
MA0061.1	MA0061.1	4.8412e-4
MA0062.2	MA0062.2	7.58052e-21
MA0065.2	MA0065.2	0.344
MA0066.1	MA0066.1	0.334
MA0067.1	MA0067.1	0.00705
MA0068.1	MA0068.1	0.824
MA0069.1	MA0069.1	0.99
MA0070.1	MA0070.1	0.924
MA0071.1	MA0071.1	0.922
MA0072.1	MA0072.1	0.0548
MA0073.1	MA0073.1	0.825
MA0074.1	MA0074.1	0.472
MA0076.1	MA0076.1	1.73226e-8
MA0077.1	MA0077.1	0.0295
MA0078.1	MA0078.1	0.674
MA0079.2	MA0079.2	0.651
MA0080.2	MA0080.2	9.00694e-12
MA0081.1	MA0081.1	0.00693
MA0083.1	MA0083.1	0.186
MA0084.1	MA0084.1	0.502
MA0087.1	MA0087.1	0.72
MA0088.1	MA0088.1	0.383
MA0090.1	MA0090.1	2.3983e-4
MA0091.1	MA0091.1	0.348
MA0092.1	MA0092.1	0.928
MA0093.1	MA0093.1	0.908
MA0099.2	MA0099.2	0.0633
MA0100.1	MA0100.1	0.429
MA0101.1	MA0101.1	0.0746
MA0102.2	MA0102.2	0.986
MA0103.1	MA0103.1	0.448
MA0104.2	MA0104.2	0.116
MA0105.1	MA0105.1	5.34104e-6
MA0106.1	MA0106.1	0.104
MA0107.1	MA0107.1	0.135
MA0108.2	MA0108.2	7.05642e-5
MA0111.1	MA0111.1	0.532
MA0112.2	MA0112.2	0.906
MA0113.1	MA0113.1	0.802
MA0114.1	MA0114.1	0.975
MA0115.1	MA0115.1	0.458
MA0116.1	MA0116.1	0.00214
MA0117.1	MA0117.1	0.0322
MA0119.1	MA0119.1	0.297
MA0122.1	MA0122.1	0.406
MA0124.1	MA0124.1	0.355
MA0125.1	MA0125.1	0.231
MA0131.1	MA0131.1	0.0913
MA0135.1	MA0135.1	0.277
MA0136.1	MA0136.1	2.21808e-24
MA0137.2	MA0137.2	0.672
MA0138.2	MA0138.2	0.179
MA0139.1	MA0139.1	0.038
MA0140.1	MA0140.1	0.0816
MA0141.1	MA0141.1	0.308
MA0142.1	MA0142.1	0.35
MA0143.1	MA0143.1	0.297
MA0144.1	MA0144.1	0.903
MA0145.1	MA0145.1	0.0604
MA0146.1	MA0146.1	0.772
MA0147.1	MA0147.1	0.141
MA0148.1	MA0148.1	0.0891
MA0149.1	MA0149.1	0.283
MA0150.1	MA0150.1	0.748
MA0152.1	MA0152.1	0.0186
MA0153.1	MA0153.1	0.346
MA0154.1	MA0154.1	0.204
MA0155.1	MA0155.1	0.262
MA0156.1	MA0156.1	2.91752e-22
MA0157.1	MA0157.1	3.68816e-4
MA0159.1	MA0159.1	0.541
MA0160.1	MA0160.1	0.873
MA0162.1	MA0162.1	0.449
MA0163.1	MA0163.1	4.26893e-5
MA0164.1	MA0164.1	0.617
MA0258.1	MA0258.1	0.889
MA0259.1	MA0259.1	0.221

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13237

Novel motif	Logo	P-value
1	1	0.553
10	10	0.0187
100	100	0.9
101	101	0.344
102	102	0.988
103	103	0.535
104	104	0.63
105	105	0.241
106	106	0.505
107	107	0.0101
108	108	0.516
109	109	0.157
11	11	0.292
110	110	0.922
111	111	0.937
112	112	0.882
113	113	0.28
114	114	0.637
115	115	0.234
116	116	0.131
117	117	0.00243
118	118	0.396
119	119	0.378
12	12	0.6
120	120	1
121	121	0.962
122	122	0.774
123	123	0.0566
124	124	0.633
125	125	0.669
126	126	0.408
127	127	0.945
128	128	0.662
129	129	0.902
13	13	0.545
130	130	0.37
131	131	0.765
132	132	0.274
133	133	0.655
134	134	0.91
135	135	0.995
136	136	0.856
137	137	0.0186
138	138	0.459
139	139	0.0549
14	14	0.61
140	140	0.196
141	141	0.853
142	142	0.622
143	143	0.00161
144	144	0.944
145	145	0.968
146	146	0.462
147	147	0.0151
148	148	0.255
149	149	0.528
15	15	0.175
150	150	0.727
151	151	0.674
152	152	0.511
153	153	0.877
154	154	0.459
155	155	0.0403
156	156	0.321
157	157	0.332
158	158	0.0163
159	159	0.303
16	16	0.533
160	160	0.185
161	161	0.913
162	162	0.0438
163	163	0.388
164	164	0.143
165	165	0.517
166	166	0.501
167	167	0.287
168	168	0.531
169	169	0.22
17	17	0.728
18	18	0.863
19	19	0.0447
2	2	0.425
20	20	0.332
21	21	0.826
22	22	0.402
23	23	0.529
24	24	0.783
25	25	0.0806
26	26	0.687
27	27	0.627
28	28	0.453
29	29	0.027
3	3	0.303
30	30	0.128
31	31	0.714
32	32	0.033
33	33	0.16
34	34	0.376
35	35	0.235
36	36	0.0301
37	37	0.193
38	38	0.728
39	39	0.258
4	4	0.706
40	40	0.638
41	41	0.0926
42	42	0.183
43	43	0.556
44	44	0.771
45	45	0.24
46	46	0.63
47	47	0.305
48	48	0.534
49	49	0.231
5	5	0.343
50	50	0.492
51	51	0.87
52	52	0.399
53	53	0.613
54	54	0.995
55	55	0.725
56	56	0.922
57	57	0.964
58	58	0.151
59	59	0.562
6	6	0.761
60	60	0.551
61	61	0.0765
62	62	0.182
63	63	0.823
64	64	0.715
65	65	0.701
66	66	0.781
67	67	0.526
68	68	0.823
69	69	0.697
7	7	0.346
70	70	0.0975
71	71	0.0904
72	72	0.133
73	73	0.567
74	74	0.682
75	75	0.0198
76	76	0.156
77	77	0.0169
78	78	0.823
79	79	0.793
8	8	0.589
80	80	0.0021
81	81	0.56
82	82	0.313
83	83	0.457
84	84	0.651
85	85	0.699
86	86	0.0998
87	87	0.866
88	88	0.837
89	89	0.0542
9	9	0.924
90	90	0.142
91	91	0.844
92	92	0.857
93	93	0.516
94	94	0.19
95	95	0.00552
96	96	0.35
97	97	0.424
98	98	0.233
99	99	1.44131e-5

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13237

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000065,UBERON:0000072,UBERON:0000077,UBERON:0000078,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0000974,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001042,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0001557,UBERON:0002050,UBERON:0002193,UBERON:0002342,UBERON:0002346,UBERON:0002368,UBERON:0002370,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002530,UBERON:0002532,UBERON:0003075,UBERON:0003104,UBERON:0003295,UBERON:0003351,UBERON:0003408,UBERON:0003929,UBERON:0004119,UBERON:0004120,UBERON:0004121,UBERON:0004177,UBERON:0004185,UBERON:0004807,UBERON:0004921,UBERON:0005057,UBERON:0005058,UBERON:0005291,UBERON:0005423,UBERON:0005428,UBERON:0005434,UBERON:0005562,UBERON:0005911,UBERON:0006562,UBERON:0006598,UBERON:0007026,UBERON:0007284,UBERON:0007690,UBERON:0009113,UBERON:0009142,UBERON:0009145
+|DRA_sample_Accession=CAGE@SAMD00004816
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000805,CL:0000806,CL:0000807,CL:0000808,CL:0000809,CL:0000810,CL:0000827,CL:0000837,CL:0000838,CL:0000893,CL:0000894,CL:0000895,CL:0000898,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002425,CL:0002427,CL:0002428,CL:0002429,CL:0002431,CL:0002432,CL:0002433,CL:0002436,CL:0002489
+|accession_numbers=CAGE;DRX008063;DRR008935;DRZ000360;DRZ001745;DRZ011710;DRZ013095
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
 |comment=Changed from previous label. TODO: full classification
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!1.93!84.88!TCF7;;chr3:63953435..63953499,+!p1@ATXN7!1.91!80.75!ATXN7;;chr9:3525727..3525828,-!p2@RFX3!1.80!154.29!RFX3;;chr1:25256756..25256774,-!p1@RUNX3!1.79!112.02!RUNX3;;chr10:35484053..35484076,+!p1@CREM!1.74!130.23!CREM;;chr4:109087445..109087463,-!p1@LEF1!1.74!53.95!LEF1;;chr2:231090433..231090469,+!p1@SP140!1.73!52.92!SP140;;chr19:16435625..16435682,+!p1@KLF2!1.71!1510.93!KLF2;;chr19:54058073..54058088,+!p1@ZNF331!1.71!49.83!ZNF331;;chrX:106960285..106960299,-!p1@TSC22D3!1.67!1153.56!TSC22D3;;chr7:50343634..50343717,+!p2@IKZF1!1.65!43.64!IKZF1;;chrY:21906594..21906622,-!p1@KDM5D!1.64!42.27!KDM5D;;chr10:35416142..35416169,+!p3@CREM!1.63!106.87!CREM;;chr5:133450365..133450444,+!p1@TCF7!1.62!176.62!TCF7;;chr2:192015701..192015743,-!p1@STAT4!1.62!54.98!STAT4;;chr20:50159198..50159299,-!p1@NFATC2!1.53!47.76!NFATC2;;chr6:106546808..106546833,+!p3@PRDM1!1.53!40.89!PRDM1;;chr3:71542615..71542644,-!p12@FOXP1!1.51!31.27!FOXP1;;chr19:45971246..45971265,+!p1@FOSB!1.47!508.91!FOSB;;chr17:37934365..37934387,-!p2@IKZF3!1.47!28.52!IKZF3;;chr2:97202991..97203043,+!p3@ARID5A!1.45!27.15!ARID5A;;chr19:54041669..54041697,+!p2@ZNF331!1.44!26.80!ZNF331;;chr17:45810594..45810608,+!p1@TBX21!1.43!25.77!TBX21;;chr2:157189180..157189290,-!p1@NR4A2!1.42!126.80!NR4A2;;chr15:60884706..60884743,-!p1@RORA!1.41!125.08!RORA;;chr5:133451347..133451358,+!p3@TCF7!1.40!24.05!TCF7;;chr9:117150254..117150271,-!p1@AKNA!1.39!62.54!AKNA;;chr20:56195474..56195506,-!p1@ZBP1!1.38!23.02!ZBP1;;chr17:38497662..38497713,+!p4@RARA!1.37!26.12!RARA;;chr10:35484090..35484104,+!p6@CREM!1.37!22.34!CREM;;chr7:50344251..50344288,+!p3@IKZF1!1.37!22.34!IKZF1;;chr19:19779619..19779670,+!p1@ZNF101!1.35!58.76!ZNF101;;chr2:231090471..231090504,+!p2@SP140!1.35!21.30!SP140;;chr17:37934204..37934241,-!p3@IKZF3!1.33!20.27!IKZF3;;chr14:64970670..64970712,-!p3@ZBTB25!1.32!42.61!ZBTB25;;chr2:208394817..208394834,+!p3@CREB1!1.31!75.94!CREB1;;chr2:192015750..192015793,-!p2@STAT4!1.31!26.12!STAT4;;chr21:36421535..36421610,-!p2@RUNX1!1.29!64.26!RUNX1;;chr14:75745523..75745537,+!p1@FOS!1.28!2108.84!FOS;;chr3:71542684..71542720,-!p18@FOXP1!1.28!18.21!FOXP1;;chr16:79634624..79634642,-!p1@MAF!1.27!67.69!MAF;;chr10:3824332..3824425,-!p4@KLF6!1.27!28.52!KLF6;;chr3:71542651..71542683,-!p22@FOXP1!1.27!17.52!FOXP1;;chr11:128392273..128392308,-!p2@ETS1!1.26!71.82!ETS1;;chr3:71355163..71355209,-!p5@FOXP1!1.26!23.71!FOXP1;;chr14:75988771..75988826,+!p1@BATF!1.26!23.02!BATF;;chr19:12902289..12902307,+!p1@JUNB!1.25!3720.45!JUNB;;chr7:50343895..50343936,+!p5@IKZF1!1.25!16.84!IKZF1;;chr3:27763807..27763822,-!p1@EOMES!1.22!15.46!EOMES;;chr6:391743..391759,+!p1@IRF4!1.20!14.78!IRF4;;chr14:64971288..64971316,-!p2@ZBTB25!1.19!43.98!ZBTB25;;chr19:45972701..45972774,+!p2@FOSB!1.17!18.90!FOSB;;chr12:72056800..72056834,+!p1@THAP2!1.17!18.56!THAP2;;chr3:18486354..18486377,-!p2@SATB1!1.16!16.84!SATB1;;chr13:74707894..74707947,-!p6@KLF12!1.16!15.12!KLF12;;chr10:35416172..35416184,+!p13@CREM!1.16!13.40!CREM;;chr6:106546834..106546850,+!p4@PRDM1!1.16!13.40!PRDM1;;chr11:128392085..128392232,-!p1@ETS1!1.15!436.75!ETS1;;chr13:41593425..41593480,-!p1@ELF1!1.15!82.81!ELF1;;chr8:123793988..123794016,+!p1@ZHX2!1.15!23.37!ZHX2;;chr8:81397846..81397860,+!p3@ZBTB10!1.15!16.49!ZBTB10;;chr10:35416125..35416138,+!p10@CREM!1.15!15.46!CREM;;chr10:8096772..8096787,+!p2@GATA3!1.15!15.46!GATA3;;chr19:19729477..19729542,-!p1@PBX4!1.14!27.15!PBX4;;chr9:102584262..102584276,+!p1@NR4A3!1.13!28.18!NR4A3;;chr17:38020392..38020477,-!p1@IKZF3!1.13!12.37!IKZF3;;chr16:3313791..3313834,+!p2@ZNF263!1.12!27.15!ZNF263;;chr6:91006575..91006602,-!p2@BACH2!1.11!17.52!BACH2;;chr2:68592406..68592424,+!p1@PLEK!1.11!12.03!PLEK;;chr3:39195075..39195088,-!p1@CSRNP1!1.10!72.16!CSRNP1;;chr8:60031619..60031676,-!p1@TOX!1.10!25.43!TOX;;chr4:109090075..109090095,-!p2@LEF1!1.10!11.68!LEF1;;chr16:79634595..79634620,-!p2@MAF!1.09!20.62!MAF;;chr20:56195525..56195556,-!p2@ZBP1!1.09!11.34!ZBP1;;chr5:142814241..142814278,-!p12@NR3C1!1.09!11.34!NR3C1;;chr2:97202480..97202499,+!p1@ARID5A!1.08!113.40!ARID5A;;chr3:23986824..23986848,+!p2@NR1D2!1.08!62.54!NR1D2;;chr16:79633894..79633954,-!p3@MAF!1.07!20.62!MAF;;chr7:50344289..50344323,+!p1@IKZF1!1.07!10.65!IKZF1;;chr6:91006518..91006570,-!p1@BACH2!1.06!24.05!BACH2;;chr3:71179699..71179744,-!p2@FOXP1!1.05!78.00!FOXP1;;chr6:152011654..152011682,+!p1@ESR1!1.05!10.31!ESR1;;chr4:38665769..38665801,+!p2@KLF3!1.04!91.06!KLF3;;chr17:37934280..37934299,-!p6@IKZF3!1.04!9.97!IKZF3;;chr8:81397820..81397836,+!p2@ZBTB10!1.03!12.37!ZBTB10;;chr10:8096631..8096660,+!p1@GATA3!1.03!11.68!GATA3;;chr10:35416223..35416234,+!p12@CREM!1.03!9.62!CREM;;chr11:85375237..85375277,-!p4@CREBZF!1.01!10.65!CREBZF;;chr2:192015677..192015691,-!p3@STAT4!1.01!9.28!STAT4;;chr17:38020516..38020544,-!p5@IKZF3!1.01!9.28!IKZF3;;chr11:128563948..128564003,+!p1@FLI1!1.00!110.30!FLI1;;chr10:104154246..104154347,+!p3@NFKB2!1.00!56.35!NFKB2;;chr9:114287433..114287513,+!p1@ZNF483!1.00!23.71!ZNF483;;chr16:88752889..88752921,-!p1@SNAI3!1.00!10.65!SNAI3;;chr4:109089901..109089930,-!p3@LEF1!1.00!8.93!LEF1;;chr19:54041645..54041661,+!p5@ZNF331!1.00!8.93!ZNF331;;chrX:49121165..49121179,-!p1@FOXP3!1.00!8.93!FOXP3;;chr4:81104895..81104920,+!p2@PRDM8!0.98!13.06!PRDM8;;chr19:16435523..16435619,+!p2@KLF2!0.98!12.03!KLF2;;chr6:106546786..106546802,+!p6@PRDM1!0.98!8.59!PRDM1;;chrY:2803415..2803468,+!p1@ZFY!0.98!8.59!ZFY;;chr11:67007548..67007610,+!p3@KDM2A!0.97!63.91!KDM2A;;chr3:63898321..63898396,+!p3@ATXN7!0.97!19.59!ATXN7;;chr1:45805693..45805718,+!p3@TOE1!0.97!18.21!TOE1;;chr19:54040550..54040594,+!p20@ZNF331!0.97!8.25!ZNF331;;chr6:106546731..106546755,+!p5@PRDM1!0.97!8.25!PRDM1;;chr5:131826457..131826514,-!p1@IRF1!0.96!327.13!IRF1;;chr20:44600199..44600219,-!p3@ZNF335!0.96!11.00!ZNF335;;chr14:75746722..75746777,+!p2@FOS!0.96!10.65!FOS;;chr6:12009042..12009092,+!p6@HIVEP1!0.96!10.65!HIVEP1;;chr13:74708246..74708264,-!p8@KLF12!0.95!8.93!KLF12;;chr10:135121763..135121783,+!p5@ZNF511!0.95!7.90!ZNF511;;chr4:109088089..109088101,-!p11@LEF1!0.95!7.90!LEF1;;chr4:109089573..109089585,-!p8@LEF1!0.95!7.90!LEF1;;chr19:12444440..12444455,-!p1@ZNF563!0.94!13.75!ZNF563;;chr12:72056773..72056796,+!p3@THAP2!0.93!9.97!THAP2;;chr10:35485013..35485034,+!p15@CREM!0.93!7.56!CREM;;chr7:137620650..137620677,-!p3@CREB3L2!0.93!7.56!CREB3L2;;chr12:133707204..133707236,+!p1@ZNF10,p2@ZNF268!0.92!42.95!ZNF10;;chrX:106960180..106960197,-!p2@TSC22D3!0.92!29.21!TSC22D3;;chr11:128392309..128392350,-!p3@ETS1!0.92!17.87!ETS1;;chr2:157199008..157199023,-!p3@NR4A2!0.92!15.81!NR4A2;;chr2:43453734..43453751,-!p1@ZFP36L2!0.91!788.28!ZFP36L2;;chrX:106960221..106960236,-!p3@TSC22D3!0.91!20.62!TSC22D3;;chr18:77155922..77155939,+!p1@NFATC1!0.91!20.27!NFATC1;;chr9:102584241..102584261,+!p4@NR4A3!0.91!11.34!NR4A3;;chr1:59250262..59250296,-!p5@JUN!0.91!7.22!JUN;;chrX:101186981..101187030,-!p1@ZMAT1!0.90!23.37!ZMAT1;;chr13:74708029..74708077,-!p2@KLF12!0.90!20.62!KLF12;;chr19:54041603..54041615,+!p10@ZNF331!0.90!6.87!ZNF331;;chr19:54058108..54058119,+!p19@ZNF331!0.90!6.87!ZNF331;;chr19:18392422..18392440,-!p1@JUND!0.89!991.37!JUND;;chr7:104654690..104654704,+!p2@MLL5!0.89!13.75!MLL5;;chr4:57522166..57522260,-!p2@HOPX!0.89!7.90!HOPX;;chr2:208031542..208031595,-!p2@KLF7!0.88!48.45!KLF7;;chr7:77428066..77428132,+!p2@PHTF2!0.88!45.02!PHTF2;;chr8:81397876..81397898,+!p5@ZBTB10!0.88!7.90!ZBTB10;;chr8:41909982..41910009,-!p2@KAT6A!0.88!7.56!KAT6A;;chr4:57522674..57522699,-!p5@HOPX!0.88!6.53!HOPX;;chr14:75988831..75988847,+!p2@BATF!0.88!6.53!BATF;;chr14:99738138..99738163,-!p1@BCL11B!0.88!6.53!BCL11B;;chr9:32550965..32551031,-!p4@TOPORS!0.87!10.31!TOPORS;;chr18:46475696..46475713,-!p1@SMAD7!0.87!7.22!SMAD7;;chr8:60031563..60031574,-!p7@TOX!0.86!6.19!TOX;;chr15:60884747..60884774,-!p3@RORA!0.85!15.46!RORA;;chr20:51588873..51588953,+!p1@TSHZ2!0.85!8.25!TSHZ2;;chr19:52674696..52674758,-!p1@ZNF836!0.84!18.56!ZNF836;;chr16:89787973..89788001,+!p3@ZNF276!0.84!11.68!ZNF276;;chr17:38020557..38020572,-!p4@IKZF3!0.84!5.84!IKZF3;;chr19:54041574..54041589,+!p6@ZNF331!0.84!5.84!ZNF331;;chr20:52226313..52226350,-!p3@ZNF217!0.84!5.84!ZNF217;;chr7:50348268..50348366,+!p4@IKZF1!0.84!5.84!IKZF1;;chr2:231090344..231090361,-!p3@SP110!0.84!5.84!SP110;;chr3:18487057..18487105,-!p4@SATB1!0.84!5.84!SATB1;;chr14:64971893..64971928,-!p8@ZBTB25!0.84!5.84!ZBTB25;;chr16:68119324..68119364,+!p1@NFATC3!0.83!27.49!NFATC3;;chr17:36861735..36861755,+!p4@MLLT6!0.83!10.31!MLLT6;;chr4:38665810..38665827,+!p1@KLF3!0.82!87.28!KLF3;;chr19:23941680..23941704,-!p1@ZNF681!0.82!17.52!ZNF681;;chr8:67525443..67525459,-!p2@MYBL1!0.82!8.59!MYBL1;;chr19:49140609..49140643,-!p1@DBP!0.81!33.33!DBP;;chr14:65569101..65569119,-!p3@MAX!0.81!18.56!MAX;;chr11:111249993..111250006,-!p1@POU2AF1!0.81!5.50!POU2AF1;;chr7:137620684..137620711,-!p4@CREB3L2!0.81!5.50!CREB3L2;;chr4:109088130..109088163,-!p13@LEF1!0.81!5.50!LEF1;;chr4:109088940..109089037,-!p4@LEF1!0.81!5.50!LEF1;;chr10:3827389..3827408,-!p1@KLF6!0.80!445.68!KLF6;;chr13:41240717..41240735,-!p2@FOXO1!0.80!38.83!FOXO1;;chr9:20621927..20621996,-!p3@MLLT3!0.80!9.28!MLLT3;;chr19:38085768..38085821,+!p1@ZNF540!0.80!8.25!ZNF540;;chrX:131623982..131624011,-!p6@MBNL3!0.80!7.90!MBNL3;;chr5:172483347..172483407,+!p1@C5orf41!0.79!41.92!CREBRF;;chr19:12721790..12721810,+!p2@ZNF791!0.79!15.12!ZNF791;;chr9:3526360..3526421,-!p5@RFX3!0.79!9.97!RFX3;;chrX:106960249..106960260,-!p5@TSC22D3!0.79!8.59!TSC22D3;;chr7:104654718..104654741,+!p3@MLL5!0.79!7.90!MLL5;;chr1:41827095..41827155,+!p1@FOXO6!0.79!7.22!FOXO6;;chr20:51589835..51589848,+!p5@TSHZ2!0.79!5.15!TSHZ2;;chr21:36421347..36421380,-!p8@RUNX1!0.79!5.15!RUNX1;;chr7:50344144..50344157,+!p6@IKZF1!0.79!5.15!IKZF1;;chrY:21906623..21906637,-!p3@KDM5D!0.79!5.15!KDM5D;;chrY:21906761..21906810,-!p2@KDM5D!0.79!5.15!KDM5D;;chr2:100759037..100759058,-!p2@AFF3!0.79!5.15!AFF3;;chr2:157189617..157189667,-!p4@NR4A2!0.79!5.15!NR4A2;;chr2:68592394..68592405,+!p2@PLEK!0.79!5.15!PLEK;;chr19:47616992..47617011,-!p4@ZC3H4!0.78!11.34!ZC3H4;;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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000624;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=EFO:0000369,FF:0000409,FF:0011121,FF:11798-124C7
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg38.nobarcode.ctss.bed.gz
 |id=FF:11798-124C7
 |is_a=EFO:0002091;;FF:0000002;;FF:0000210
+|is_obsolete=
+|library_id=CNhs13237
+|library_id_phase_based=2:CNhs13237
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11798
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11798
 |name=CD4+CD25-CD45RA- memory conventional T cells, donor2
 |namespace=
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs13237,LSID1006,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=124
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=0.787
 |sample_age=23
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.59598695911865e-226!GO:0043227;membrane-bound organelle;2.49730775742486e-200!GO:0043231;intracellular membrane-bound organelle;5.63889854470375e-200!GO:0043226;organelle;9.13095531114402e-186!GO:0043229;intracellular organelle;4.67899182008359e-185!GO:0005737;cytoplasm;1.5186029870745e-133!GO:0044422;organelle part;2.24639392416858e-114!GO:0044446;intracellular organelle part;1.1029335887778e-112!GO:0005634;nucleus;1.01186850458862e-105!GO:0043170;macromolecule metabolic process;7.8672178332493e-99!GO:0044237;cellular metabolic process;1.20705934964437e-98!GO:0044238;primary metabolic process;2.54790431100138e-93!GO:0032991;macromolecular complex;6.14638144923715e-93!GO:0044444;cytoplasmic part;1.44689126488033e-91!GO:0030529;ribonucleoprotein complex;1.15685668268676e-86!GO:0003723;RNA binding;1.96767772393092e-79!GO:0044428;nuclear part;2.53342894831522e-75!GO:0043283;biopolymer metabolic process;3.02605051345562e-69!GO:0043233;organelle lumen;6.61488425830434e-65!GO:0031974;membrane-enclosed lumen;6.61488425830434e-65!GO:0010467;gene expression;6.69038820053001e-62!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.78435326423064e-57!GO:0005739;mitochondrion;1.19027535210416e-55!GO:0006396;RNA processing;3.53094852464621e-54!GO:0006412;translation;4.82514525669343e-52!GO:0005515;protein binding;3.39044949484727e-49!GO:0005840;ribosome;4.57519274903907e-49!GO:0019538;protein metabolic process;6.47759952871446e-48!GO:0044267;cellular protein metabolic process;7.70519020587198e-47!GO:0031981;nuclear lumen;1.90019596077242e-46!GO:0044260;cellular macromolecule metabolic process;4.60819704045098e-46!GO:0033036;macromolecule localization;7.07675641599556e-46!GO:0016071;mRNA metabolic process;2.08270164490442e-45!GO:0043234;protein complex;5.06439573416769e-45!GO:0015031;protein transport;1.44016418174796e-43!GO:0003735;structural constituent of ribosome;2.96155406095081e-43!GO:0003676;nucleic acid binding;3.29716735438514e-43!GO:0045184;establishment of protein localization;2.11461744505032e-42!GO:0008104;protein localization;2.96799069220058e-42!GO:0044429;mitochondrial part;6.65142751455097e-40!GO:0009059;macromolecule biosynthetic process;1.18411443278639e-39!GO:0008380;RNA splicing;3.69208686898572e-39!GO:0006397;mRNA processing;4.51206167324851e-39!GO:0033279;ribosomal subunit;7.056200161042e-39!GO:0031090;organelle membrane;1.24183860750287e-38!GO:0031967;organelle envelope;4.9417169639175e-38!GO:0031975;envelope;1.08152548659422e-37!GO:0005829;cytosol;1.21499873472006e-33!GO:0016070;RNA metabolic process;1.59558661462129e-33!GO:0046907;intracellular transport;8.78674568390282e-32!GO:0006259;DNA metabolic process;7.7261173325674e-31!GO:0006886;intracellular protein transport;1.14197194920658e-30!GO:0044249;cellular biosynthetic process;1.14197194920658e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.32820128925258e-30!GO:0009058;biosynthetic process;3.3724347367321e-30!GO:0005681;spliceosome;1.97170867779049e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.72855796982065e-29!GO:0005654;nucleoplasm;5.79480651670382e-29!GO:0065003;macromolecular complex assembly;2.58338374208135e-28!GO:0044445;cytosolic part;6.1334065904753e-27!GO:0016043;cellular component organization and biogenesis;9.43290821381146e-27!GO:0005740;mitochondrial envelope;4.96109959909437e-26!GO:0006512;ubiquitin cycle;1.23383856251639e-25!GO:0031966;mitochondrial membrane;1.38115482082669e-25!GO:0000166;nucleotide binding;5.80098613390977e-25!GO:0022607;cellular component assembly;1.06951996338979e-24!GO:0019866;organelle inner membrane;1.49107244626116e-24!GO:0044451;nucleoplasm part;5.36987198266378e-23!GO:0005743;mitochondrial inner membrane;1.29592297269821e-22!GO:0051641;cellular localization;3.03234763505803e-22!GO:0051649;establishment of cellular localization;5.72254136084489e-22!GO:0006996;organelle organization and biogenesis;5.85081841034872e-22!GO:0006119;oxidative phosphorylation;8.81175755592477e-21!GO:0015935;small ribosomal subunit;1.69757785912525e-20!GO:0012501;programmed cell death;1.0415664451515e-19!GO:0006915;apoptosis;1.32054163549901e-19!GO:0044455;mitochondrial membrane part;1.83054409888818e-19!GO:0015934;large ribosomal subunit;1.99623441335031e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.51365273886544e-19!GO:0022618;protein-RNA complex assembly;2.56371489616346e-19!GO:0043412;biopolymer modification;2.59159646756436e-19!GO:0017111;nucleoside-triphosphatase activity;3.21362607215413e-19!GO:0016462;pyrophosphatase activity;3.2158964202789e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;3.24156486645804e-19!GO:0044265;cellular macromolecule catabolic process;3.57949193433044e-19!GO:0008219;cell death;4.00528763292666e-19!GO:0016265;death;4.00528763292666e-19!GO:0016874;ligase activity;7.08033494681608e-19!GO:0019941;modification-dependent protein catabolic process;1.13718324425877e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.13718324425877e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;1.19882781043834e-18!GO:0005730;nucleolus;1.58298554819052e-18!GO:0006511;ubiquitin-dependent protein catabolic process;2.11584954255296e-18!GO:0044257;cellular protein catabolic process;3.31131050041024e-18!GO:0043228;non-membrane-bound organelle;3.31335146153778e-18!GO:0043232;intracellular non-membrane-bound organelle;3.31335146153778e-18!GO:0006605;protein targeting;5.41314061059997e-18!GO:0032553;ribonucleotide binding;1.78890300826891e-17!GO:0032555;purine ribonucleotide binding;1.78890300826891e-17!GO:0006464;protein modification process;5.45575693904566e-17!GO:0043285;biopolymer catabolic process;6.14497348618519e-17!GO:0017076;purine nucleotide binding;6.69277382781164e-17!GO:0031980;mitochondrial lumen;1.07083457300574e-16!GO:0005759;mitochondrial matrix;1.07083457300574e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.54826566472009e-16!GO:0008135;translation factor activity, nucleic acid binding;1.70305621750697e-16!GO:0006974;response to DNA damage stimulus;2.50806471493197e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;3.85606891089563e-16!GO:0016604;nuclear body;5.56468504254246e-16!GO:0005746;mitochondrial respiratory chain;8.5862844143672e-16!GO:0008134;transcription factor binding;1.07405579865216e-15!GO:0006913;nucleocytoplasmic transport;1.23211331647654e-15!GO:0043687;post-translational protein modification;1.471756839989e-15!GO:0006323;DNA packaging;1.6748527180967e-15!GO:0051276;chromosome organization and biogenesis;1.995765641144e-15!GO:0051169;nuclear transport;2.16470747323516e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.83513344459548e-15!GO:0006457;protein folding;3.89554481724653e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.51180000177207e-15!GO:0009057;macromolecule catabolic process;5.28440769464169e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.95920464918047e-14!GO:0003954;NADH dehydrogenase activity;2.95920464918047e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.95920464918047e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.40754580232291e-14!GO:0005524;ATP binding;4.86844258340446e-14!GO:0042623;ATPase activity, coupled;6.69667077067468e-14!GO:0016887;ATPase activity;6.69667077067468e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;6.75384753001367e-14!GO:0000375;RNA splicing, via transesterification reactions;6.75384753001367e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.75384753001367e-14!GO:0012505;endomembrane system;6.85426995209704e-14!GO:0006281;DNA repair;8.47974776660643e-14!GO:0042981;regulation of apoptosis;1.01888512540408e-13!GO:0032559;adenyl ribonucleotide binding;1.35470034676975e-13!GO:0043067;regulation of programmed cell death;1.60938117065931e-13!GO:0016607;nuclear speck;1.7877462384552e-13!GO:0030163;protein catabolic process;2.30404880651201e-13!GO:0007049;cell cycle;2.38001009685494e-13!GO:0050794;regulation of cellular process;4.2339246042585e-13!GO:0030554;adenyl nucleotide binding;6.02187617828898e-13!GO:0003743;translation initiation factor activity;1.06490160533324e-12!GO:0005635;nuclear envelope;1.06852883472408e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.34901351660691e-12!GO:0042773;ATP synthesis coupled electron transport;1.34901351660691e-12!GO:0005694;chromosome;2.16461820062189e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.72208200258566e-12!GO:0045271;respiratory chain complex I;2.72208200258566e-12!GO:0005747;mitochondrial respiratory chain complex I;2.72208200258566e-12!GO:0044248;cellular catabolic process;3.1189224481707e-12!GO:0006413;translational initiation;3.82836775324929e-12!GO:0005761;mitochondrial ribosome;4.60775599433166e-12!GO:0000313;organellar ribosome;4.60775599433166e-12!GO:0065004;protein-DNA complex assembly;5.53452235335687e-12!GO:0031965;nuclear membrane;7.37720984054442e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.56819634910649e-12!GO:0017038;protein import;9.42832797101095e-12!GO:0006333;chromatin assembly or disassembly;9.52227395393713e-12!GO:0019222;regulation of metabolic process;1.21150556499746e-11!GO:0004386;helicase activity;2.64213278743674e-11!GO:0042254;ribosome biogenesis and assembly;3.16552704624131e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.0489513955759e-11!GO:0048770;pigment granule;4.11489359324623e-11!GO:0042470;melanosome;4.11489359324623e-11!GO:0008639;small protein conjugating enzyme activity;6.98674880510198e-11!GO:0044453;nuclear membrane part;9.97409014994248e-11!GO:0044427;chromosomal part;1.11038234219954e-10!GO:0051186;cofactor metabolic process;1.12794667869526e-10!GO:0004842;ubiquitin-protein ligase activity;1.25083431127661e-10!GO:0016568;chromatin modification;1.47656665409937e-10!GO:0051082;unfolded protein binding;1.54228715965056e-10!GO:0006446;regulation of translational initiation;1.77130774681233e-10!GO:0022402;cell cycle process;2.3854787624528e-10!GO:0048193;Golgi vesicle transport;2.963059308147e-10!GO:0008026;ATP-dependent helicase activity;3.73874184452241e-10!GO:0019787;small conjugating protein ligase activity;4.01856683832374e-10!GO:0000785;chromatin;7.40750414846995e-10!GO:0009719;response to endogenous stimulus;8.17723945850677e-10!GO:0031323;regulation of cellular metabolic process;8.67205005569474e-10!GO:0051726;regulation of cell cycle;9.22675165836944e-10!GO:0019829;cation-transporting ATPase activity;1.05076144521736e-09!GO:0050657;nucleic acid transport;1.23356886165491e-09!GO:0051236;establishment of RNA localization;1.23356886165491e-09!GO:0050658;RNA transport;1.23356886165491e-09!GO:0006403;RNA localization;1.24858719318907e-09!GO:0000074;regulation of progression through cell cycle;1.40277045259079e-09!GO:0003712;transcription cofactor activity;1.55854334089962e-09!GO:0005643;nuclear pore;1.68436595815553e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.8870322974732e-09!GO:0006350;transcription;3.14223918601903e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.62409010314988e-09!GO:0043566;structure-specific DNA binding;3.6596660974624e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.72732689027984e-09!GO:0006793;phosphorus metabolic process;7.02185211425423e-09!GO:0006796;phosphate metabolic process;7.02185211425423e-09!GO:0006334;nucleosome assembly;8.13368312983894e-09!GO:0006399;tRNA metabolic process;9.25745287001657e-09!GO:0006732;coenzyme metabolic process;1.08889564177129e-08!GO:0065002;intracellular protein transport across a membrane;1.20419745082466e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.28661164580768e-08!GO:0005794;Golgi apparatus;1.30839979415178e-08!GO:0031497;chromatin assembly;1.41492563404727e-08!GO:0009259;ribonucleotide metabolic process;1.63220273757594e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.86185045431331e-08!GO:0050789;regulation of biological process;2.32361040322414e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.3237418043248e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.4016646566296e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.44596927495346e-08!GO:0051170;nuclear import;2.44596927495346e-08!GO:0009260;ribonucleotide biosynthetic process;2.71813465977309e-08!GO:0006164;purine nucleotide biosynthetic process;2.74542465947837e-08!GO:0005768;endosome;3.5462933482172e-08!GO:0007243;protein kinase cascade;3.82042778957008e-08!GO:0010468;regulation of gene expression;4.06707245653458e-08!GO:0016787;hydrolase activity;4.06707245653458e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.10014238261859e-08!GO:0003697;single-stranded DNA binding;4.17168367479965e-08!GO:0006606;protein import into nucleus;4.21015865444225e-08!GO:0051028;mRNA transport;4.89795291048678e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.99725655116736e-08!GO:0016072;rRNA metabolic process;5.31912710738638e-08!GO:0006163;purine nucleotide metabolic process;5.92877604318206e-08!GO:0016881;acid-amino acid ligase activity;6.16293386953512e-08!GO:0008270;zinc ion binding;6.27742317291106e-08!GO:0006364;rRNA processing;7.66529232697872e-08!GO:0046930;pore complex;8.2360243650508e-08!GO:0044432;endoplasmic reticulum part;8.81491739712567e-08!GO:0008565;protein transporter activity;9.28026664960635e-08!GO:0015986;ATP synthesis coupled proton transport;1.01102607583252e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.01102607583252e-07!GO:0009150;purine ribonucleotide metabolic process;1.1707006376563e-07!GO:0004298;threonine endopeptidase activity;1.1707006376563e-07!GO:0016310;phosphorylation;1.30613366956044e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.37892361950271e-07!GO:0009055;electron carrier activity;1.64337983914272e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.27002791640829e-07!GO:0009060;aerobic respiration;2.78508811504507e-07!GO:0006366;transcription from RNA polymerase II promoter;3.19873248452476e-07!GO:0005783;endoplasmic reticulum;3.20268715110966e-07!GO:0045786;negative regulation of progression through cell cycle;4.16568313483606e-07!GO:0003713;transcription coactivator activity;4.76232294074543e-07!GO:0032446;protein modification by small protein conjugation;5.08838716551391e-07!GO:0006916;anti-apoptosis;5.71315405504322e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.85063203903889e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;7.87725966567335e-07!GO:0032774;RNA biosynthetic process;7.91931915060336e-07!GO:0006754;ATP biosynthetic process;7.91931915060336e-07!GO:0006753;nucleoside phosphate metabolic process;7.91931915060336e-07!GO:0006917;induction of apoptosis;7.94922779615269e-07!GO:0005789;endoplasmic reticulum membrane;8.38584601223406e-07!GO:0048523;negative regulation of cellular process;8.66044171832844e-07!GO:0006351;transcription, DNA-dependent;9.59699008545785e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.0010862925822e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.0010862925822e-06!GO:0000151;ubiquitin ligase complex;1.02857747071717e-06!GO:0043065;positive regulation of apoptosis;1.06970197134726e-06!GO:0016567;protein ubiquitination;1.0903749435645e-06!GO:0051188;cofactor biosynthetic process;1.23229794339449e-06!GO:0012502;induction of programmed cell death;1.23801387979988e-06!GO:0051246;regulation of protein metabolic process;1.31608421547349e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.36296354275877e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.36296354275877e-06!GO:0000245;spliceosome assembly;1.42764104346304e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.47778522974979e-06!GO:0016192;vesicle-mediated transport;1.54101341253631e-06!GO:0043068;positive regulation of programmed cell death;1.62761349342086e-06!GO:0045333;cellular respiration;1.82117700887328e-06!GO:0043069;negative regulation of programmed cell death;1.99328304826976e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.05657176167081e-06!GO:0015399;primary active transmembrane transporter activity;2.05657176167081e-06!GO:0045449;regulation of transcription;2.08951311677793e-06!GO:0051168;nuclear export;2.2739813255329e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.75477746567658e-06!GO:0043066;negative regulation of apoptosis;2.84827793474618e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.96690280146252e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.96690280146252e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.96690280146252e-06!GO:0009141;nucleoside triphosphate metabolic process;3.08580489795795e-06!GO:0016563;transcription activator activity;3.08587216299141e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.18719590836858e-06!GO:0016779;nucleotidyltransferase activity;3.31475110839459e-06!GO:0009056;catabolic process;3.50344884596317e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.54368369983501e-06!GO:0016740;transferase activity;3.67804899771618e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.74209658416948e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.74209658416948e-06!GO:0046034;ATP metabolic process;3.76371534184849e-06!GO:0065009;regulation of a molecular function;3.76371534184849e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.76628535477513e-06!GO:0006260;DNA replication;4.47619298588609e-06!GO:0045259;proton-transporting ATP synthase complex;5.26563097966335e-06!GO:0031324;negative regulation of cellular metabolic process;5.90368277382979e-06!GO:0043038;amino acid activation;5.9693147308312e-06!GO:0006418;tRNA aminoacylation for protein translation;5.9693147308312e-06!GO:0043039;tRNA aminoacylation;5.9693147308312e-06!GO:0016564;transcription repressor activity;6.17903641150442e-06!GO:0007005;mitochondrion organization and biogenesis;6.31377223360102e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.36796682479906e-06!GO:0046914;transition metal ion binding;8.16988826956475e-06!GO:0019899;enzyme binding;8.28861496986386e-06!GO:0003724;RNA helicase activity;8.87109300536141e-06!GO:0009108;coenzyme biosynthetic process;1.21736730748354e-05!GO:0005525;GTP binding;1.2948444250411e-05!GO:0048519;negative regulation of biological process;1.43983760876371e-05!GO:0005793;ER-Golgi intermediate compartment;1.44036153469926e-05!GO:0000278;mitotic cell cycle;1.46712602720024e-05!GO:0006613;cotranslational protein targeting to membrane;1.8294623042377e-05!GO:0006099;tricarboxylic acid cycle;1.90131410460278e-05!GO:0046356;acetyl-CoA catabolic process;1.90131410460278e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.91938815033679e-05!GO:0006401;RNA catabolic process;2.15185606771219e-05!GO:0006752;group transfer coenzyme metabolic process;2.26636110035368e-05!GO:0000786;nucleosome;2.33255519918112e-05!GO:0065007;biological regulation;2.7765407532547e-05!GO:0003924;GTPase activity;2.87648357695425e-05!GO:0009615;response to virus;3.0657680038078e-05!GO:0003677;DNA binding;3.07942696442607e-05!GO:0008632;apoptotic program;3.38318897368116e-05!GO:0006355;regulation of transcription, DNA-dependent;3.49577202397778e-05!GO:0030120;vesicle coat;3.69606758050519e-05!GO:0030662;coated vesicle membrane;3.69606758050519e-05!GO:0007242;intracellular signaling cascade;3.79009614905037e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;4.08928845841962e-05!GO:0043492;ATPase activity, coupled to movement of substances;4.09682601903989e-05!GO:0008234;cysteine-type peptidase activity;4.55082043545152e-05!GO:0006084;acetyl-CoA metabolic process;4.60233082733235e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.67598034956387e-05!GO:0048475;coated membrane;5.2427280977733e-05!GO:0030117;membrane coat;5.2427280977733e-05!GO:0009892;negative regulation of metabolic process;5.26293139778835e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;5.63860349795198e-05!GO:0006310;DNA recombination;7.51380294424404e-05!GO:0003690;double-stranded DNA binding;8.5149748506789e-05!GO:0005762;mitochondrial large ribosomal subunit;8.5658360966318e-05!GO:0000315;organellar large ribosomal subunit;8.5658360966318e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.60595963145073e-05!GO:0005813;centrosome;9.40549315811965e-05!GO:0043623;cellular protein complex assembly;0.000105928664655751!GO:0006461;protein complex assembly;0.000121687163861338!GO:0009109;coenzyme catabolic process;0.00012672765489698!GO:0051187;cofactor catabolic process;0.00012672765489698!GO:0008186;RNA-dependent ATPase activity;0.000128044946716701!GO:0006402;mRNA catabolic process;0.00012969501513483!GO:0004674;protein serine/threonine kinase activity;0.000130204265066292!GO:0016363;nuclear matrix;0.000138762906857653!GO:0005770;late endosome;0.000143505634869319!GO:0044440;endosomal part;0.000154414092857508!GO:0010008;endosome membrane;0.000154414092857508!GO:0005773;vacuole;0.000171631648413131!GO:0006417;regulation of translation;0.000181047011612944!GO:0032561;guanyl ribonucleotide binding;0.000193089899638593!GO:0019001;guanyl nucleotide binding;0.000193089899638593!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000208752607241697!GO:0009117;nucleotide metabolic process;0.000222134641040473!GO:0016481;negative regulation of transcription;0.000243305519388999!GO:0006612;protein targeting to membrane;0.000255504619887919!GO:0043021;ribonucleoprotein binding;0.000258448861931446!GO:0005885;Arp2/3 protein complex;0.000272826147129621!GO:0005815;microtubule organizing center;0.000275261011302581!GO:0060090;molecular adaptor activity;0.000290315771176355!GO:0016251;general RNA polymerase II transcription factor activity;0.000355488066251422!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000359250130671237!GO:0008654;phospholipid biosynthetic process;0.000360826834771907!GO:0004004;ATP-dependent RNA helicase activity;0.000386442347508823!GO:0044431;Golgi apparatus part;0.000392880474591627!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000414747133135881!GO:0030384;phosphoinositide metabolic process;0.000439997970841154!GO:0006352;transcription initiation;0.000442707147042182!GO:0005667;transcription factor complex;0.000456119258656145!GO:0006818;hydrogen transport;0.000486175672902389!GO:0031326;regulation of cellular biosynthetic process;0.000503229731124262!GO:0043681;protein import into mitochondrion;0.000503229731124262!GO:0015992;proton transport;0.000515440917747872!GO:0003729;mRNA binding;0.000537315564971587!GO:0051427;hormone receptor binding;0.000602911180913929!GO:0006891;intra-Golgi vesicle-mediated transport;0.000605472919503708!GO:0008168;methyltransferase activity;0.000613722021078989!GO:0003899;DNA-directed RNA polymerase activity;0.000619438996421783!GO:0046489;phosphoinositide biosynthetic process;0.000620470403390791!GO:0000314;organellar small ribosomal subunit;0.000628822896449234!GO:0005763;mitochondrial small ribosomal subunit;0.000628822896449234!GO:0000323;lytic vacuole;0.000647723428087298!GO:0005764;lysosome;0.000647723428087298!GO:0016741;transferase activity, transferring one-carbon groups;0.000647723428087298!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000663216432070462!GO:0008033;tRNA processing;0.0006758274407574!GO:0022403;cell cycle phase;0.00075387158542331!GO:0006611;protein export from nucleus;0.000764721408013815!GO:0006261;DNA-dependent DNA replication;0.000827172921529084!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0010629397389348!GO:0035257;nuclear hormone receptor binding;0.00113469810867351!GO:0005769;early endosome;0.00122404273195509!GO:0019843;rRNA binding;0.00128215775158898!GO:0031072;heat shock protein binding;0.001287844996989!GO:0051789;response to protein stimulus;0.00147206099564135!GO:0006986;response to unfolded protein;0.00147206099564135!GO:0006650;glycerophospholipid metabolic process;0.00149265213455379!GO:0003714;transcription corepressor activity;0.00151245138728108!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00165699177441677!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00165699177441677!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00165699177441677!GO:0048522;positive regulation of cellular process;0.00172265530067509!GO:0022890;inorganic cation transmembrane transporter activity;0.00178532557907208!GO:0050790;regulation of catalytic activity;0.00180005447949575!GO:0019867;outer membrane;0.00180621801358526!GO:0051252;regulation of RNA metabolic process;0.00182941863307716!GO:0006414;translational elongation;0.00185460949594325!GO:0000087;M phase of mitotic cell cycle;0.00189742418311189!GO:0019783;small conjugating protein-specific protease activity;0.00193447801369227!GO:0006383;transcription from RNA polymerase III promoter;0.00195070969471113!GO:0005741;mitochondrial outer membrane;0.0019787834688776!GO:0046822;regulation of nucleocytoplasmic transport;0.00224120645267646!GO:0051539;4 iron, 4 sulfur cluster binding;0.00229650956256468!GO:0042110;T cell activation;0.00231532224013059!GO:0031968;organelle outer membrane;0.00233820522234759!GO:0004518;nuclease activity;0.0023733375329658!GO:0009889;regulation of biosynthetic process;0.00237536844484689!GO:0046474;glycerophospholipid biosynthetic process;0.00262594566497965!GO:0004843;ubiquitin-specific protease activity;0.00268286565998639!GO:0007067;mitosis;0.00283175330524436!GO:0016197;endosome transport;0.00290250185631879!GO:0007006;mitochondrial membrane organization and biogenesis;0.00302890940622096!GO:0008022;protein C-terminus binding;0.00315029359810147!GO:0009967;positive regulation of signal transduction;0.00316400119789236!GO:0000139;Golgi membrane;0.00328255876090693!GO:0006607;NLS-bearing substrate import into nucleus;0.00328255876090693!GO:0005774;vacuolar membrane;0.00333162606158099!GO:0005684;U2-dependent spliceosome;0.00343411897432874!GO:0004527;exonuclease activity;0.00357016207653306!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00365333516270485!GO:0003746;translation elongation factor activity;0.0038027475132901!GO:0007050;cell cycle arrest;0.00385867421049185!GO:0032259;methylation;0.00387779352568259!GO:0042802;identical protein binding;0.00392681493645963!GO:0005798;Golgi-associated vesicle;0.00403060813946506!GO:0043488;regulation of mRNA stability;0.00403060813946506!GO:0043487;regulation of RNA stability;0.00403060813946506!GO:0051251;positive regulation of lymphocyte activation;0.00403060813946506!GO:0048500;signal recognition particle;0.00404578183177687!GO:0051087;chaperone binding;0.00404645818691963!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00414918143216364!GO:0015002;heme-copper terminal oxidase activity;0.00414918143216364!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00414918143216364!GO:0004129;cytochrome-c oxidase activity;0.00414918143216364!GO:0022415;viral reproductive process;0.00423905260299469!GO:0051301;cell division;0.00431217229308137!GO:0044452;nucleolar part;0.00431217229308137!GO:0004221;ubiquitin thiolesterase activity;0.00441215319242566!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00441355036303951!GO:0006626;protein targeting to mitochondrion;0.00449076410994867!GO:0006302;double-strand break repair;0.00465338430513591!GO:0006405;RNA export from nucleus;0.00467919546970288!GO:0043414;biopolymer methylation;0.00475829410649589!GO:0007264;small GTPase mediated signal transduction;0.00475829410649589!GO:0016584;nucleosome positioning;0.00501906118363767!GO:0015630;microtubule cytoskeleton;0.00532713470634501!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00542449073368761!GO:0016859;cis-trans isomerase activity;0.00572251541548223!GO:0005070;SH3/SH2 adaptor activity;0.0057278087005469!GO:0009165;nucleotide biosynthetic process;0.0057278087005469!GO:0046966;thyroid hormone receptor binding;0.00626207635397253!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00648449003159051!GO:0045047;protein targeting to ER;0.00648449003159051!GO:0005669;transcription factor TFIID complex;0.00648449003159051!GO:0051090;regulation of transcription factor activity;0.00648449003159051!GO:0031625;ubiquitin protein ligase binding;0.0064993487775303!GO:0006839;mitochondrial transport;0.00650923659078754!GO:0048471;perinuclear region of cytoplasm;0.00653010929549866!GO:0008312;7S RNA binding;0.0065937505224358!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0067087101518168!GO:0015631;tubulin binding;0.00683474571682272!GO:0016790;thiolester hydrolase activity;0.00684552433298512!GO:0044437;vacuolar part;0.00703395340952095!GO:0006506;GPI anchor biosynthetic process;0.00734608246534541!GO:0005765;lysosomal membrane;0.00762616268910475!GO:0005637;nuclear inner membrane;0.0076869025739792!GO:0016853;isomerase activity;0.0078143743791512!GO:0042101;T cell receptor complex;0.00783566826713456!GO:0003678;DNA helicase activity;0.00798168570504713!GO:0045454;cell redox homeostasis;0.008053618182355!GO:0051540;metal cluster binding;0.00814766685390626!GO:0051536;iron-sulfur cluster binding;0.00814766685390626!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00814766685390626!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00814766685390626!GO:0031902;late endosome membrane;0.00839425430796392!GO:0000049;tRNA binding;0.00839425430796392!GO:0006505;GPI anchor metabolic process;0.00844163862634317!GO:0001772;immunological synapse;0.00853814351170162!GO:0003684;damaged DNA binding;0.00869279026303865!GO:0051223;regulation of protein transport;0.00884957916573905!GO:0006338;chromatin remodeling;0.00905293210376679!GO:0019901;protein kinase binding;0.0092857302506443!GO:0006497;protein amino acid lipidation;0.00933700977731908!GO:0051092;activation of NF-kappaB transcription factor;0.00946545488348758!GO:0008624;induction of apoptosis by extracellular signals;0.0100810897080568!GO:0003711;transcription elongation regulator activity;0.0101115092152373!GO:0045892;negative regulation of transcription, DNA-dependent;0.0102855203653186!GO:0051098;regulation of binding;0.0104227602745989!GO:0043621;protein self-association;0.010628837404407!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0107240833667404!GO:0030518;steroid hormone receptor signaling pathway;0.0108283628570199!GO:0016788;hydrolase activity, acting on ester bonds;0.0110156907552709!GO:0006919;caspase activation;0.0113317962061705!GO:0048487;beta-tubulin binding;0.0114793881540809!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0115743508905049!GO:0015980;energy derivation by oxidation of organic compounds;0.0117768238490836!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0117768238490836!GO:0030658;transport vesicle membrane;0.0120893184935727!GO:0006376;mRNA splice site selection;0.0121272379091912!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0121272379091912!GO:0043281;regulation of caspase activity;0.0123851240865552!GO:0016272;prefoldin complex;0.0124089215396955!GO:0005869;dynactin complex;0.0126771565248416!GO:0043022;ribosome binding;0.0127953838357526!GO:0007265;Ras protein signal transduction;0.0128482720245993!GO:0006289;nucleotide-excision repair;0.0131042713618474!GO:0004532;exoribonuclease activity;0.0131139291355965!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0131139291355965!GO:0016791;phosphoric monoester hydrolase activity;0.01314167561823!GO:0051329;interphase of mitotic cell cycle;0.0134228699868408!GO:0051920;peroxiredoxin activity;0.0136999517563447!GO:0004197;cysteine-type endopeptidase activity;0.0137496509304834!GO:0050852;T cell receptor signaling pathway;0.0138462026671084!GO:0000209;protein polyubiquitination;0.0138665532582114!GO:0008408;3'-5' exonuclease activity;0.013931525418552!GO:0033116;ER-Golgi intermediate compartment membrane;0.014502874458528!GO:0046467;membrane lipid biosynthetic process;0.0146338646879742!GO:0050865;regulation of cell activation;0.014777529489512!GO:0030118;clathrin coat;0.0148642288762281!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0148878389315968!GO:0051249;regulation of lymphocyte activation;0.015054050421959!GO:0005048;signal sequence binding;0.0150743450874944!GO:0051059;NF-kappaB binding;0.0151327015783126!GO:0031252;leading edge;0.0152637504156571!GO:0051235;maintenance of localization;0.0154419352569346!GO:0050811;GABA receptor binding;0.015720140937775!GO:0005657;replication fork;0.0158775530444492!GO:0016311;dephosphorylation;0.016424212608146!GO:0004722;protein serine/threonine phosphatase activity;0.0165547045574829!GO:0046649;lymphocyte activation;0.0167282327417904!GO:0000279;M phase;0.0167947992699261!GO:0007034;vacuolar transport;0.0171087616532113!GO:0008017;microtubule binding;0.0171524670539367!GO:0051336;regulation of hydrolase activity;0.0177646851561588!GO:0003725;double-stranded RNA binding;0.0180301735877676!GO:0019900;kinase binding;0.0180334449301736!GO:0001667;ameboidal cell migration;0.0180844736907016!GO:0032027;myosin light chain binding;0.0180844736907016!GO:0051325;interphase;0.0183172590024326!GO:0000287;magnesium ion binding;0.0184225259467528!GO:0008047;enzyme activator activity;0.0186370810349045!GO:0044438;microbody part;0.0186370810349045!GO:0044439;peroxisomal part;0.0186370810349045!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.018648351802268!GO:0008139;nuclear localization sequence binding;0.0195864324253692!GO:0048518;positive regulation of biological process;0.0209234141062492!GO:0031124;mRNA 3'-end processing;0.0214420496932774!GO:0000738;DNA catabolic process, exonucleolytic;0.0216525122218583!GO:0051052;regulation of DNA metabolic process;0.0217818703357509!GO:0030833;regulation of actin filament polymerization;0.0221862904858125!GO:0047485;protein N-terminus binding;0.022291786000977!GO:0030137;COPI-coated vesicle;0.0225987552432701!GO:0006914;autophagy;0.0228420158747699!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0230609419474585!GO:0010257;NADH dehydrogenase complex assembly;0.0230609419474585!GO:0033108;mitochondrial respiratory chain complex assembly;0.0230609419474585!GO:0030663;COPI coated vesicle membrane;0.0233060196774326!GO:0030126;COPI vesicle coat;0.0233060196774326!GO:0008287;protein serine/threonine phosphatase complex;0.0233677974506694!GO:0050870;positive regulation of T cell activation;0.0235205297815971!GO:0009116;nucleoside metabolic process;0.0235268952097648!GO:0008097;5S rRNA binding;0.0241760858812538!GO:0030660;Golgi-associated vesicle membrane;0.0245928303209042!GO:0042158;lipoprotein biosynthetic process;0.024747377942437!GO:0000082;G1/S transition of mitotic cell cycle;0.0247697339620382!GO:0008180;signalosome;0.0250205770178756!GO:0050863;regulation of T cell activation;0.0254219083487489!GO:0008637;apoptotic mitochondrial changes;0.0258596327679271!GO:0008276;protein methyltransferase activity;0.0260830189404202!GO:0043280;positive regulation of caspase activity;0.0260939214723527!GO:0033157;regulation of intracellular protein transport;0.0262203700923374!GO:0042306;regulation of protein import into nucleus;0.0262203700923374!GO:0019904;protein domain specific binding;0.0265563037325922!GO:0040029;regulation of gene expression, epigenetic;0.026684970205667!GO:0045603;positive regulation of endothelial cell differentiation;0.0268861716493169!GO:0006595;polyamine metabolic process;0.0268861716493169!GO:0007004;telomere maintenance via telomerase;0.0270941676283475!GO:0000178;exosome (RNase complex);0.0280023240885233!GO:0005521;lamin binding;0.0283101054948242!GO:0030695;GTPase regulator activity;0.0288960807446764!GO:0032200;telomere organization and biogenesis;0.0291112191546935!GO:0000723;telomere maintenance;0.0291112191546935!GO:0031903;microbody membrane;0.0292852269700813!GO:0005778;peroxisomal membrane;0.0292852269700813!GO:0004721;phosphoprotein phosphatase activity;0.0292852269700813!GO:0030521;androgen receptor signaling pathway;0.0296817295752188!GO:0030522;intracellular receptor-mediated signaling pathway;0.0296935960662347!GO:0048468;cell development;0.0301318079725174!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.030504493292068!GO:0031982;vesicle;0.030504493292068!GO:0022411;cellular component disassembly;0.0309042647418201!GO:0000119;mediator complex;0.0315372042669551!GO:0046979;TAP2 binding;0.0319240369402234!GO:0046977;TAP binding;0.0319240369402234!GO:0046978;TAP1 binding;0.0319240369402234!GO:0031123;RNA 3'-end processing;0.0322148178757713!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0325248581001092!GO:0030041;actin filament polymerization;0.0327413696086773!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0336792901063!GO:0003682;chromatin binding;0.0339143973630376!GO:0032508;DNA duplex unwinding;0.0340072484881244!GO:0032392;DNA geometric change;0.0340072484881244!GO:0004576;oligosaccharyl transferase activity;0.0340192540177607!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0341876508226608!GO:0000303;response to superoxide;0.0350973059573637!GO:0051219;phosphoprotein binding;0.0354489912976445!GO:0001784;phosphotyrosine binding;0.0354691177190251!GO:0016605;PML body;0.0355884647403223!GO:0045309;protein phosphorylated amino acid binding;0.0357463371913892!GO:0007259;JAK-STAT cascade;0.0357463371913892!GO:0042608;T cell receptor binding;0.0359999051825497!GO:0005832;chaperonin-containing T-complex;0.0359999051825497!GO:0030258;lipid modification;0.0361556720363122!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0362092895343368!GO:0016763;transferase activity, transferring pentosyl groups;0.0371717439335589!GO:0008320;protein transmembrane transporter activity;0.0372891588264158!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0373470075484557!GO:0015923;mannosidase activity;0.0382628320501523!GO:0005777;peroxisome;0.0383258390857468!GO:0042579;microbody;0.0383258390857468!GO:0019210;kinase inhibitor activity;0.0385852136535323!GO:0030968;unfolded protein response;0.038591223389988!GO:0032940;secretion by cell;0.0390855128391091!GO:0000776;kinetochore;0.0391574315592034!GO:0005083;small GTPase regulator activity;0.0391574315592034!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0402147745199411!GO:0031647;regulation of protein stability;0.0402440352474444!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0402440352474444!GO:0008213;protein amino acid alkylation;0.0407658154321732!GO:0006479;protein amino acid methylation;0.0407658154321732!GO:0009112;nucleobase metabolic process;0.0410808858108717!GO:0006144;purine base metabolic process;0.0419714037944787!GO:0033549;MAP kinase phosphatase activity;0.0423478451981232!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0423478451981232!GO:0009966;regulation of signal transduction;0.0423863001184436!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0423863001184436!GO:0016569;covalent chromatin modification;0.042531584485739!GO:0000059;protein import into nucleus, docking;0.0426355052993359!GO:0000090;mitotic anaphase;0.0426954428568408!GO:0051322;anaphase;0.0426954428568408!GO:0005665;DNA-directed RNA polymerase II, core complex;0.043271061419418!GO:0048002;antigen processing and presentation of peptide antigen;0.0444729275405172!GO:0031988;membrane-bound vesicle;0.0447634469910845!GO:0016570;histone modification;0.0449884609371524!GO:0016585;chromatin remodeling complex;0.0452553897401412!GO:0006984;ER-nuclear signaling pathway;0.045442963665215!GO:0051287;NAD binding;0.045442963665215!GO:0042393;histone binding;0.0461811483223619!GO:0006013;mannose metabolic process;0.0471578528243479!GO:0005784;translocon complex;0.0473835546866383!GO:0022406;membrane docking;0.0474739639602393!GO:0048278;vesicle docking;0.0474739639602393!GO:0043284;biopolymer biosynthetic process;0.0480345603706186!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0481947846130086!GO:0019058;viral infectious cycle;0.0483736166701357!GO:0006672;ceramide metabolic process;0.0484724219107178!GO:0045947;negative regulation of translational initiation;0.0485894608663045!GO:0030880;RNA polymerase complex;0.048645283875742!GO:0030867;rough endoplasmic reticulum membrane;0.04895074173534!GO:0006284;base-excision repair;0.0492869253702917!GO:0000118;histone deacetylase complex;0.0493883001873265!GO:0005092;GDP-dissociation inhibitor activity;0.0495537187901526
 |sample_id=11798
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=blood
 |top_motifs=PAX3,7:3.43646403234;CREB1:3.32319686439;RUNX1..3:3.16826767223;FOX{D1,D2}:3.14110359386;FOX{F1,F2,J1}:3.02565303924;ELF1,2,4:2.82985874546;RFX2..5_RFXANK_RFXAP:2.80130852863;BPTF:2.67758779671;ATF5_CREB3:2.6463737606;RORA:2.63388669165;FOXO1,3,4:2.61538900582;FOX{I1,J2}:2.527770664;T:2.46007338018;PDX1:2.45509725982;RFX1:2.38315866695;ATF4:2.37044378143;CDX1,2,4:2.10968215143;ETS1,2:2.04452079794;HMX1:2.03822856359;PBX1:1.9955501591;DMAP1_NCOR{1,2}_SMARC:1.98790891375;FOXN1:1.73542631063;TLX2:1.72457042486;LEF1_TCF7_TCF7L1,2:1.5793869432;ATF2:1.53941423817;SPI1:1.40805877266;IRF1,2:1.40375549166;GATA6:1.38630339268;PAX2:1.38162717139;JUN:1.37045148774;ELK1,4_GABP{A,B1}:1.34835197774;TGIF1:1.28310940652;ATF6:1.15538386565;SPIB:1.00161227386;NFIL3:0.986039899856;NFIX:0.9771640857;PAX6:0.947917251302;PAX4:0.939856802861;NFATC1..3:0.931901450588;NANOG{mouse}:0.88952980529;SOX2:0.818840564937;BREu{core}:0.762806703635;NFKB1_REL_RELA:0.730810488778;ZBTB16:0.704879763974;MAFB:0.596267554478;NKX2-1,4:0.51244279308;IRF7:0.50444966963;ZEB1:0.458902158108;STAT1,3:0.433368494807;TBX4,5:0.428892647367;HIF1A:0.401079212537;FOXQ1:0.398410422354;AHR_ARNT_ARNT2:0.356111006263;SNAI1..3:0.339105746931;SREBF1,2:0.329226501629;CRX:0.324355459717;HES1:0.286966941227;HOX{A6,A7,B6,B7}:0.281351280921;MYOD1:0.246480096578;FOXP1:0.241718840424;NFE2L1:0.236043909621;LMO2:0.235311470142;FOXA2:0.215062142898;NR5A1,2:0.213923255314;IKZF2:0.197996803965;YY1:0.189293283233;EP300:0.179321492524;POU2F1..3:0.15903017633;TAL1_TCF{3,4,12}:0.151082446164;NKX6-1,2:0.144926723267;POU1F1:0.0978752013162;SOX5:0.0914267814927;CUX2:0.0322537124233;STAT5{A,B}:-0.0244336338183;NKX2-2,8:-0.0375873882132;MYB:-0.04763610552;AR:-0.0632911951945;NFY{A,B,C}:-0.0678683504341;NANOG:-0.0717100001762;PITX1..3:-0.0960740017043;SPZ1:-0.0976885926818;FOSL2:-0.10435786936;OCT4_SOX2{dimer}:-0.142574208002;PAX5:-0.176854535284;NRF1:-0.180992244926;ZNF384:-0.186921681951;STAT2,4,6:-0.280490799338;EGR1..3:-0.295185326743;E2F1..5:-0.301288514554;NFE2L2:-0.342502249877;BACH2:-0.347955874358;RBPJ:-0.350415459757;HLF:-0.368822085862;FOS_FOS{B,L1}_JUN{B,D}:-0.380773407461;ALX1:-0.385215366666;CEBPA,B_DDIT3:-0.396480034125;ZNF143:-0.43547112643;HNF4A_NR2F1,2:-0.43816711346;NFE2:-0.43872344239;EVI1:-0.44861370594;ZNF148:-0.4537338142;HMGA1,2:-0.457829839172;HBP1_HMGB_SSRP1_UBTF:-0.465369832656;VSX1,2:-0.469422796534;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.472041666011;GFI1:-0.473420626082;DBP:-0.520005947728;HNF1A:-0.521547246747;NKX3-1:-0.525862104132;HAND1,2:-0.546377867351;GLI1..3:-0.569132199696;FOXD3:-0.569512547522;SOX{8,9,10}:-0.573395665957;PRRX1,2:-0.584008000704;NHLH1,2:-0.589846628864;PPARG:-0.616871459654;FOXP3:-0.646244769943;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.651547638785;FOXM1:-0.672403050381;SRF:-0.708331210097;MYFfamily:-0.710186721795;SMAD1..7,9:-0.72882784479;GCM1,2:-0.762432716522;ALX4:-0.792249546473;RXRA_VDR{dimer}:-0.837303444988;MEF2{A,B,C,D}:-0.852024752159;bHLH_family:-0.856381462885;RREB1:-0.857365044134;ESRRA:-0.891856582929;PAX8:-0.896682013602;MED-1{core}:-0.896985587783;ZFP161:-0.966391696124;XBP1:-0.969114090622;ZBTB6:-0.992894524748;HOX{A5,B5}:-1.00088280716;GFI1B:-1.01409649271;MZF1:-1.02587734818;AIRE:-1.05037047904;ADNP_IRX_SIX_ZHX:-1.05445040854;MTF1:-1.08397549683;SOX17:-1.10781518851;MYBL2:-1.11138734613;ZNF238:-1.11313176793;MAZ:-1.12503734383;POU5F1:-1.1284837882;TFAP4:-1.17999025753;TP53:-1.19074419478;TFDP1:-1.19881599937;ARID5B:-1.21611334128;PATZ1:-1.22220195378;HSF1,2:-1.22428173235;REST:-1.23366373359;TBP:-1.28121246381;MTE{core}:-1.28396833869;NR6A1:-1.31287656256;PRDM1:-1.32004619767;LHX3,4:-1.33044569932;GATA4:-1.36862951741;TOPORS:-1.40332123276;NR1H4:-1.41235995309;TFAP2B:-1.43601217776;TFCP2:-1.4548962279;HOXA9_MEIS1:-1.45599317374;HIC1:-1.45620991113;ZNF423:-1.45845433903;UFEwm:-1.47122490442;SP1:-1.50612863425;NKX2-3_NKX2-5:-1.51925843616;NR3C1:-1.58139896862;GTF2A1,2:-1.6254867612;GTF2I:-1.63606793303;POU3F1..4:-1.66613650233;CDC5L:-1.67927205083;XCPE1{core}:-1.68911975966;ONECUT1,2:-1.72140268104;TLX1..3_NFIC{dimer}:-1.72541766449;FOXL1:-1.74548545937;TEAD1:-1.74629351694;EN1,2:-1.82091793165;ZIC1..3:-1.86740326929;GZF1:-1.86926787413;HOX{A4,D4}:-1.87298027188;EBF1:-1.89515212703;ESR1:-1.89771799247;KLF4:-1.93344921373;RXR{A,B,G}:-1.94174841754;TFAP2{A,C}:-1.98697081226;POU6F1:-2.03937369179;PAX1,9:-2.10786788615;TEF:-2.39387833024;NKX3-2:-2.52156413546;IKZF1:-2.99418364174
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11798-124C7;search_select_hide=table117:FF:11798-124C7
 }}

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FF:11798-124C7: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:21, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0