FF:11842-124H6: Difference between revisions

Latest revision as of 18:23, 4 June 2020

Name:	mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02-G)
Species:	Human (Homo sapiens)
Library ID:	CNhs13507
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	bone marrow
dev stage	NA
sex	NA
age	NA
cell type	mesenchymal precursor cell
cell line	NA
company	NA
collaboration	Claudio Schneider LNCIB
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005622

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13507		CAGE		DRX008566		DRR009438

Accession ID Hg19

Library id		BAM		CTSS
CNhs13507		DRZ000863		DRZ002248

Accession ID Hg38

Library id		BAM		CTSS
CNhs13507		DRZ012213		DRZ013598

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0466
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.226
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.345
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0274
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.00968
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.456
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0458
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0703
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.545
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.678
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.285
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.537
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.349
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.131
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.166
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.166
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.456
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	1.012
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.379
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.817
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13507

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.903
MA0003.1	MA0003.1	0.635
MA0004.1	MA0004.1	0.57
MA0006.1	MA0006.1	0.664
MA0007.1	MA0007.1	0.137
MA0009.1	MA0009.1	0.815
MA0014.1	MA0014.1	0.706
MA0017.1	MA0017.1	0.407
MA0018.2	MA0018.2	4.51159e-4
MA0019.1	MA0019.1	0.784
MA0024.1	MA0024.1	2.2615e-6
MA0025.1	MA0025.1	0.00904
MA0027.1	MA0027.1	0.706
MA0028.1	MA0028.1	2.19344e-5
MA0029.1	MA0029.1	0.301
MA0030.1	MA0030.1	0.276
MA0031.1	MA0031.1	0.512
MA0035.2	MA0035.2	0.0568
MA0038.1	MA0038.1	2.67484e-4
MA0039.2	MA0039.2	0.00441
MA0040.1	MA0040.1	0.784
MA0041.1	MA0041.1	0.45
MA0042.1	MA0042.1	0.961
MA0043.1	MA0043.1	0.00101
MA0046.1	MA0046.1	0.258
MA0047.2	MA0047.2	0.308
MA0048.1	MA0048.1	0.747
MA0050.1	MA0050.1	0.0251
MA0051.1	MA0051.1	0.171
MA0052.1	MA0052.1	0.478
MA0055.1	MA0055.1	0.301
MA0057.1	MA0057.1	0.934
MA0058.1	MA0058.1	0.168
MA0059.1	MA0059.1	0.574
MA0060.1	MA0060.1	4.59898e-12
MA0061.1	MA0061.1	0.545
MA0062.2	MA0062.2	1.19001e-13
MA0065.2	MA0065.2	0.0895
MA0066.1	MA0066.1	0.808
MA0067.1	MA0067.1	0.355
MA0068.1	MA0068.1	0.494
MA0069.1	MA0069.1	0.082
MA0070.1	MA0070.1	0.835
MA0071.1	MA0071.1	0.554
MA0072.1	MA0072.1	0.294
MA0073.1	MA0073.1	0.197
MA0074.1	MA0074.1	0.48
MA0076.1	MA0076.1	2.87759e-8
MA0077.1	MA0077.1	0.906
MA0078.1	MA0078.1	0.682
MA0079.2	MA0079.2	0.0805
MA0080.2	MA0080.2	4.53779e-7
MA0081.1	MA0081.1	0.00171
MA0083.1	MA0083.1	0.00324
MA0084.1	MA0084.1	0.196
MA0087.1	MA0087.1	0.436
MA0088.1	MA0088.1	0.59
MA0090.1	MA0090.1	3.29974e-5
MA0091.1	MA0091.1	0.487
MA0092.1	MA0092.1	0.532
MA0093.1	MA0093.1	0.621
MA0099.2	MA0099.2	1.21137e-9
MA0100.1	MA0100.1	0.435
MA0101.1	MA0101.1	0.216
MA0102.2	MA0102.2	0.595
MA0103.1	MA0103.1	0.0157
MA0104.2	MA0104.2	0.116
MA0105.1	MA0105.1	0.683
MA0106.1	MA0106.1	0.0936
MA0107.1	MA0107.1	0.163
MA0108.2	MA0108.2	0.0107
MA0111.1	MA0111.1	0.36
MA0112.2	MA0112.2	0.051
MA0113.1	MA0113.1	0.286
MA0114.1	MA0114.1	0.0742
MA0115.1	MA0115.1	0.00908
MA0116.1	MA0116.1	0.602
MA0117.1	MA0117.1	0.727
MA0119.1	MA0119.1	0.0462
MA0122.1	MA0122.1	0.14
MA0124.1	MA0124.1	0.428
MA0125.1	MA0125.1	0.0564
MA0131.1	MA0131.1	0.216
MA0135.1	MA0135.1	0.484
MA0136.1	MA0136.1	8.69594e-10
MA0137.2	MA0137.2	0.13
MA0138.2	MA0138.2	0.745
MA0139.1	MA0139.1	0.618
MA0140.1	MA0140.1	0.825
MA0141.1	MA0141.1	0.254
MA0142.1	MA0142.1	0.0776
MA0143.1	MA0143.1	0.438
MA0144.1	MA0144.1	0.394
MA0145.1	MA0145.1	0.709
MA0146.1	MA0146.1	0.498
MA0147.1	MA0147.1	0.225
MA0148.1	MA0148.1	0.179
MA0149.1	MA0149.1	0.312
MA0150.1	MA0150.1	0.0981
MA0152.1	MA0152.1	0.0605
MA0153.1	MA0153.1	0.876
MA0154.1	MA0154.1	0.716
MA0155.1	MA0155.1	0.118
MA0156.1	MA0156.1	2.79347e-7
MA0157.1	MA0157.1	0.427
MA0159.1	MA0159.1	0.541
MA0160.1	MA0160.1	0.3
MA0162.1	MA0162.1	0.0427
MA0163.1	MA0163.1	0.408
MA0164.1	MA0164.1	0.444
MA0258.1	MA0258.1	0.516
MA0259.1	MA0259.1	0.277

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13507

Novel motif	Logo	P-value
1	1	0.862
10	10	0.533
100	100	0.315
101	101	0.0954
102	102	0.147
103	103	0.917
104	104	0.99
105	105	0.178
106	106	0.0677
107	107	0.159
108	108	0.484
109	109	0.989
11	11	0.787
110	110	0.35
111	111	0.35
112	112	0.266
113	113	0.0402
114	114	0.181
115	115	0.194
116	116	0.343
117	117	0.635
118	118	0.638
119	119	0.318
12	12	0.225
120	120	0.532
121	121	0.894
122	122	0.0304
123	123	0.0621
124	124	0.565
125	125	0.356
126	126	0.598
127	127	0.162
128	128	0.251
129	129	0.764
13	13	0.82
130	130	0.783
131	131	0.0227
132	132	0.969
133	133	0.483
134	134	0.317
135	135	0.298
136	136	0.292
137	137	0.295
138	138	0.697
139	139	0.144
14	14	0.278
140	140	0.298
141	141	0.976
142	142	0.378
143	143	0.0605
144	144	0.256
145	145	0.576
146	146	0.569
147	147	0.0723
148	148	0.64
149	149	0.0308
15	15	0.291
150	150	0.33
151	151	0.269
152	152	0.067
153	153	0.711
154	154	0.906
155	155	7.78399e-4
156	156	0.487
157	157	0.693
158	158	0.177
159	159	0.518
16	16	0.0817
160	160	0.244
161	161	0.561
162	162	0.422
163	163	0.0573
164	164	0.0441
165	165	0.882
166	166	0.0664
167	167	0.719
168	168	0.493
169	169	0.267
17	17	0.257
18	18	0.0683
19	19	0.133
2	2	0.445
20	20	0.165
21	21	0.165
22	22	0.63
23	23	0.00639
24	24	0.853
25	25	0.11
26	26	0.555
27	27	0.706
28	28	0.361
29	29	0.724
3	3	0.503
30	30	0.576
31	31	0.689
32	32	1.17313e-4
33	33	0.79
34	34	0.87
35	35	0.438
36	36	0.272
37	37	0.088
38	38	0.947
39	39	0.325
4	4	0.731
40	40	0.521
41	41	0.558
42	42	0.189
43	43	0.171
44	44	0.777
45	45	0.961
46	46	0.486
47	47	0.359
48	48	0.851
49	49	0.86
5	5	0.221
50	50	0.665
51	51	0.974
52	52	0.697
53	53	0.686
54	54	0.533
55	55	0.116
56	56	0.841
57	57	0.658
58	58	0.138
59	59	0.738
6	6	0.405
60	60	0.495
61	61	0.899
62	62	0.59
63	63	0.253
64	64	0.692
65	65	0.383
66	66	0.0317
67	67	0.257
68	68	0.677
69	69	0.913
7	7	0.0901
70	70	0.946
71	71	0.842
72	72	0.861
73	73	0.0857
74	74	0.0491
75	75	0.933
76	76	0.618
77	77	0.168
78	78	0.556
79	79	2.4936e-4
8	8	0.316
80	80	0.664
81	81	0.65
82	82	0.576
83	83	0.841
84	84	0.588
85	85	7.25998e-4
86	86	0.167
87	87	0.73
88	88	0.693
89	89	0.392
9	9	0.253
90	90	0.0624
91	91	0.244
92	92	0.0412
93	93	0.767
94	94	0.368
95	95	0.776
96	96	0.99
97	97	0.108
98	98	0.331
99	99	0.0382

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13507

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002090 technical replicate
EFO:0002091 biological replicate
FF:0000275 human mesenchymal precursor cell- ovarian cancer-right ovary sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002118 (right ovary)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
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+|DRA_sample_Accession=CAGE@SAMD00005622
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371
+|accession_numbers=CAGE;DRX008566;DRR009438;DRZ000863;DRZ002248;DRZ012213;DRZ013598
-|ancestors_in_disease_facet=DOID:0050686,DOID:120,DOID:14566,DOID:162,DOID:193,DOID:2394,DOID:4
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002118,UBERON:0003100,UBERON:0000474
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034
+|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000275
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr12:66218255..66218304,+!p3@HMGA2!1.59!99.30!HMGA2;;chr19:46801639..46801699,+!p1@HIF3A!1.57!35.73!HIF3A;;chr20:50179368..50179392,-!p2@NFATC2!1.47!36.19!NFATC2;;chr8:11561684..11561751,+!p1@GATA4!1.42!25.52!GATA4;;chr12:66218598..66218645,+!p2@HMGA2!1.39!106.26!HMGA2;;chr1:170632285..170632309,+!p1@PRRX1!1.39!26.45!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.38!62.18!OSR1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.37!22.27!HOXC5;;chr8:55370487..55370503,+!p1@SOX17!1.34!20.88!SOX17;;chr18:19749386..19749404,+!p2@GATA6!1.28!25.52!GATA6;;chr3:141087393..141087426,+!p3@ZBTB38!1.25!65.89!ZBTB38;;chr11:61520075..61520136,+!p1@C11orf9!1.25!35.27!C11orf9;;chr19:45971246..45971265,+!p1@FOSB!1.24!296.98!FOSB;;chr12:66218212..66218244,+!p5@HMGA2!1.18!20.42!HMGA2;;chr11:46299199..46299233,+!p1@CREB3L1!1.17!70.07!CREB3L1;;chr7:44143925..44143970,+!p1@AEBP1!1.14!280.28!AEBP1;;chr6:134210243..134210257,+!p1@TCF21!1.13!12.53!TCF21;;chr3:141105705..141105770,+!p4@ZBTB38!1.09!13.92!ZBTB38;;chr2:102091566..102091581,-!p1@RFX8!1.08!11.14!RFX8;;chr7:44143978..44143989,+!p2@AEBP1!1.07!19.95!AEBP1;;chr12:66218836..66218888,+!p1@HMGA2!1.04!93.27!HMGA2;;chr8:106330656..106330684,+!p1@ZFPM2!1.03!25.99!ZFPM2;;chr12:66218378..66218401,+!p6@HMGA2!1.02!14.85!HMGA2;;chr12:66218443..66218461,+!p8@HMGA2!1.02!12.06!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!1.01!29.23!GATA6;;chr15:96874145..96874166,+!p7@NR2F2!1.01!18.10!NR2F2;;chr12:26277956..26277980,-!p1@BHLHE41!1.00!32.95!BHLHE41;;chr2:239756671..239756732,+!p1@TWIST2!1.00!29.23!TWIST2;;chr3:141121847..141121868,+!p5@ZBTB38!0.99!13.46!ZBTB38;;chr7:1577899..1577943,+!p3@MAFK!0.99!8.82!MAFK;;chr12:66218904..66218913,+!p11@HMGA2!0.99!8.82!HMGA2;;chr15:96873984..96873999,+!p3@NR2F2!0.98!64.04!NR2F2;;chr12:66218183..66218209,+!p4@HMGA2!0.98!16.71!HMGA2;;chr11:46299539..46299620,+!p2@CREB3L1!0.97!14.39!CREB3L1;;chr17:46132044..46132080,+!p4@NFE2L1!0.97!8.35!NFE2L1;;chr2:239756739..239756755,+!p2@TWIST2!0.95!13.92!TWIST2;;chr9:127269661..127269719,-!p1@NR5A1!0.93!7.42!NR5A1;;chr14:75745523..75745537,+!p1@FOS!0.90!878.42!FOS;;chr8:72756063..72756125,-!p1@MSC!0.90!14.39!MSC;;chr1:170632250..170632277,+!p7@PRRX1!0.90!6.96!PRRX1;;chr4:174450089..174450153,-!p2@HAND2!0.90!6.96!HAND2;;chr12:77459306..77459365,-!p1@E2F7!0.89!89.56!E2F7;;chr12:115121962..115121987,-!p1@TBX3!0.89!59.86!TBX3;;chr10:64576105..64576133,-!p1@EGR2!0.89!14.39!EGR2;;chr12:66218573..66218596,+!p7@HMGA2!0.89!10.21!HMGA2;;chr7:44143997..44144008,+!p3@AEBP1!0.89!8.82!AEBP1;;chr17:38256799..38256815,-!p3@NR1D1!0.87!12.06!NR1D1;;chr16:31076332..31076388,-!p3@ZNF668!0.87!6.50!ZNF668;;chr2:121493425..121493474,+!p1@GLI2!0.86!14.39!GLI2;;chr22:38598086..38598105,+!p1@MAFF!0.85!69.14!MAFF;;chr15:96874012..96874042,+!p2@NR2F2!0.85!58.47!NR2F2;;chr11:46299443..46299459,+!p4@CREB3L1!0.85!6.03!CREB3L1;;chr19:42636586..42636607,-!p1@POU2F2!0.84!17.17!POU2F2;;chr8:106330696..106330719,+!p2@ZFPM2!0.83!7.42!ZFPM2;;chr22:38598057..38598071,+!p3@MAFF!0.82!13.92!MAFF;;chr1:170633348..170633399,+!p2@PRRX1!0.82!7.89!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.82!5.57!PRRX1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.82!5.57!HOXC5;;chr2:208030647..208030689,-!p1@KLF7!0.81!49.19!KLF7;;chr15:96873921..96873946,+!p1@NR2F2!0.79!160.09!NR2F2;;chr2:176994408..176994492,+!p1@HOXD8!0.79!5.10!HOXD8;;chr12:115122318..115122331,-!p2@TBX3!0.79!5.10!TBX3;;chr12:66218923..66218934,+!p14@HMGA2!0.79!5.10!HMGA2;;chr21:36260343..36260402,-!p6@RUNX1!0.78!8.35!RUNX1;;chr12:26277817..26277863,-!p2@BHLHE41!0.78!6.96!BHLHE41;;chr1:170632959..170632987,+!p4@PRRX1!0.78!5.57!PRRX1;;chr12:52445218..52445237,+!p1@NR4A1!0.77!67.28!NR4A1;;chr15:96874244..96874259,+!p5@NR2F2!0.77!12.53!NR2F2;;chr21:36260295..36260310,-!p3@RUNX1!0.77!8.35!RUNX1;;chr8:72756267..72756296,-!p4@MSC!0.77!7.42!MSC;;chr19:45908292..45908374,-!p1@PPP1R13L!0.76!46.40!PPP1R13L;;chr6:12011943..12012015,+!p2@HIVEP1!0.76!16.71!HIVEP1;;chr15:96869255..96869291,+!p6@NR2F2!0.75!8.82!NR2F2;;chr1:170633058..170633084,+!p5@PRRX1!0.75!4.64!PRRX1;;chr11:125034640..125034655,+!p1@PKNOX2!0.75!4.64!PKNOX2;;chr12:54402745..54402788,+!p1@HOXC8!0.75!4.64!HOXC8;;chr3:138665937..138665968,-!p1@FOXL2!0.75!4.64!FOXL2;;chr5:72744594..72744609,-!p1@FOXD1!0.74!22.74!FOXD1;;chr9:16870710..16870763,-!p1@BNC2!0.74!8.35!BNC2;;chr8:72756667..72756736,-!p2@MSC!0.74!7.42!MSC;;chr8:72756213..72756243,-!p5@MSC!0.74!6.03!MSC;;chr12:66218003..66218018,+!p9@HMGA2!0.74!5.57!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!0.73!5.10!PRRX1;;chr3:141087339..141087387,+!p2@ZBTB38!0.72!48.72!ZBTB38;;chr8:49833948..49833973,-!p2@SNAI2!0.72!30.16!SNAI2;;chr17:1959369..1959388,+!p2@HIC1!0.72!12.06!HIC1;;chr15:96874216..96874236,+!p13@NR2F2!0.72!6.96!NR2F2;;chr12:96588143..96588185,+!p1@ELK3!0.71!57.08!ELK3;;chr17:38256822..38256851,-!p1@NR1D1!0.71!36.66!NR1D1;;chr5:321810..321877,+!p1@AHRR!0.71!14.39!AHRR;;chr12:66218420..66218439,+!p12@HMGA2!0.71!4.18!HMGA2;;chr3:141121820..141121838,+!p9@ZBTB38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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
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+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520ovarian%2520cancer%2520right%2520ovary%252c%2520donor3%2520%2528SOC-57-02-G%2529.CNhs13507.11842-124H6.hg38.nobarcode.bam
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 |id=FF:11842-124H6
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+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11842
 |name=mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02-G)
 |namespace=
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
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 |rna_box=124
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@@ Line 57: / Line 78: @@
 |rna_weight_ug=5.11455
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@@ Line 69: / Line 91: @@
 |sample_ethnicity=
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lumen;1.90000139396417e-52!GO:0031974;membrane-enclosed lumen;1.90000139396417e-52!GO:0031090;organelle membrane;5.36986805815079e-52!GO:0003723;RNA binding;4.80027218554321e-51!GO:0019538;protein metabolic process;4.38261766319499e-49!GO:0044428;nuclear part;1.59437027206344e-48!GO:0044260;cellular macromolecule metabolic process;1.64216119845996e-44!GO:0044267;cellular protein metabolic process;1.23880807706056e-43!GO:0015031;protein transport;4.12284725946339e-43!GO:0033036;macromolecule localization;8.32352187452163e-43!GO:0006412;translation;1.33279068849066e-42!GO:0005634;nucleus;1.53804004040592e-42!GO:0005840;ribosome;1.15174162123748e-41!GO:0045184;establishment of protein localization;1.45061934533439e-40!GO:0008104;protein localization;4.63000509996968e-40!GO:0009058;biosynthetic process;7.4633457890332e-40!GO:0016043;cellular component organization and biogenesis;4.44541347022505e-39!GO:0005829;cytosol;8.02584577783038e-39!GO:0003735;structural constituent of ribosome;1.16176714678166e-37!GO:0043234;protein complex;1.72338431555853e-36!GO:0009059;macromolecule biosynthetic process;1.05872300583715e-35!GO:0044429;mitochondrial part;1.05089630957614e-34!GO:0044249;cellular biosynthetic process;2.71089657516177e-34!GO:0046907;intracellular transport;3.42227957204342e-34!GO:0031967;organelle envelope;9.64936616645432e-34!GO:0006396;RNA processing;1.15012617371378e-33!GO:0031975;envelope;2.09141101523558e-33!GO:0033279;ribosomal subunit;2.98969631889612e-33!GO:0016071;mRNA metabolic process;2.24498029997348e-29!GO:0043283;biopolymer metabolic process;2.67520739242041e-29!GO:0006886;intracellular protein transport;3.66850194841506e-29!GO:0031981;nuclear lumen;3.89332913183882e-29!GO:0008380;RNA splicing;2.16259751420228e-27!GO:0005783;endoplasmic reticulum;7.43725569621892e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.6447102674948e-26!GO:0010467;gene expression;2.52395716873831e-25!GO:0006397;mRNA processing;2.76306595917494e-25!GO:0012505;endomembrane system;1.12909808272704e-24!GO:0005740;mitochondrial envelope;1.62395003528394e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.72533875442926e-22!GO:0031966;mitochondrial membrane;3.16015803029049e-22!GO:0065003;macromolecular complex assembly;5.66913966363507e-22!GO:0051641;cellular localization;1.0926496393988e-21!GO:0051649;establishment of cellular localization;1.26494196920656e-21!GO:0006457;protein folding;2.04450982456157e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.58209475014733e-21!GO:0044445;cytosolic part;7.29958906327998e-21!GO:0019866;organelle inner membrane;7.7310829659552e-21!GO:0006996;organelle organization and biogenesis;1.42014709500404e-20!GO:0006119;oxidative phosphorylation;2.12420093803014e-20!GO:0005794;Golgi apparatus;2.97194946606539e-20!GO:0044432;endoplasmic reticulum part;5.44750624184482e-20!GO:0005743;mitochondrial inner membrane;1.98600594413691e-19!GO:0048770;pigment granule;2.18040711413286e-19!GO:0042470;melanosome;2.18040711413286e-19!GO:0022607;cellular component assembly;2.33698268555845e-19!GO:0016462;pyrophosphatase activity;4.77333557718199e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.53090742884534e-19!GO:0000166;nucleotide binding;6.53162169240906e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;7.26876799942791e-19!GO:0005681;spliceosome;7.26876799942791e-19!GO:0043228;non-membrane-bound organelle;7.26876799942791e-19!GO:0043232;intracellular non-membrane-bound organelle;7.26876799942791e-19!GO:0017111;nucleoside-triphosphatase activity;1.34504590956513e-18!GO:0005654;nucleoplasm;6.54632728080125e-18!GO:0015934;large ribosomal subunit;7.4966173514506e-18!GO:0044455;mitochondrial membrane part;2.95064057274911e-17!GO:0048193;Golgi vesicle transport;2.38828904865963e-16!GO:0015935;small ribosomal subunit;2.52732965774849e-16!GO:0022618;protein-RNA complex assembly;3.96201560734293e-16!GO:0051082;unfolded protein binding;1.15253366793549e-15!GO:0008134;transcription factor binding;3.4568478998062e-15!GO:0044265;cellular macromolecule catabolic process;3.91843766317769e-15!GO:0043285;biopolymer catabolic process;7.86774191738143e-15!GO:0005746;mitochondrial respiratory chain;1.16133149824499e-14!GO:0051186;cofactor metabolic process;1.39600425391566e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.67794380193166e-14!GO:0044451;nucleoplasm part;1.70809412187555e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.05041703817395e-14!GO:0044257;cellular protein catabolic process;2.76850718789677e-14!GO:0016874;ligase activity;2.91628220362825e-14!GO:0019941;modification-dependent protein catabolic process;3.32393410668681e-14!GO:0043632;modification-dependent macromolecule catabolic process;3.32393410668681e-14!GO:0009057;macromolecule catabolic process;4.09061995574818e-14!GO:0006511;ubiquitin-dependent protein catabolic process;5.14425150066133e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.08632363047383e-14!GO:0032553;ribonucleotide binding;6.08632363047383e-14!GO:0032555;purine ribonucleotide binding;6.08632363047383e-14!GO:0006605;protein targeting;6.14058197629062e-14!GO:0017076;purine nucleotide binding;6.69794750311525e-14!GO:0016192;vesicle-mediated transport;6.87823836555572e-14!GO:0006259;DNA metabolic process;7.94238563535064e-14!GO:0005789;endoplasmic reticulum membrane;8.65472232816367e-14!GO:0000502;proteasome complex (sensu Eukaryota);8.67422388064114e-14!GO:0006512;ubiquitin cycle;1.07071594658177e-13!GO:0008135;translation factor activity, nucleic acid binding;1.29575959762715e-13!GO:0031980;mitochondrial lumen;1.44682304078505e-13!GO:0005759;mitochondrial matrix;1.44682304078505e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.48606121976078e-13!GO:0030163;protein catabolic process;1.83205461831989e-13!GO:0044248;cellular catabolic process;3.34076257447306e-13!GO:0043412;biopolymer modification;3.93877129195415e-13!GO:0050136;NADH dehydrogenase (quinone) activity;4.14538241012228e-13!GO:0003954;NADH dehydrogenase activity;4.14538241012228e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.14538241012228e-13!GO:0005793;ER-Golgi intermediate compartment;5.70344172140316e-13!GO:0012501;programmed cell death;6.44858521412932e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.15010991952301e-12!GO:0006915;apoptosis;1.73219529834792e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.69727409115519e-12!GO:0048523;negative regulation of cellular process;5.80328441079262e-12!GO:0006464;protein modification process;6.25177943955292e-12!GO:0005730;nucleolus;7.59241531021532e-12!GO:0008219;cell death;1.35396086525842e-11!GO:0016265;death;1.35396086525842e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.29307477128614e-11!GO:0045271;respiratory chain complex I;2.29307477128614e-11!GO:0005747;mitochondrial respiratory chain complex I;2.29307477128614e-11!GO:0006732;coenzyme metabolic process;3.99181490317397e-11!GO:0042775;organelle ATP synthesis coupled electron transport;4.37685782573383e-11!GO:0042773;ATP synthesis coupled electron transport;4.37685782573383e-11!GO:0005524;ATP binding;5.43061716344643e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.75818476539503e-11!GO:0006413;translational initiation;6.92292156682445e-11!GO:0005635;nuclear envelope;7.10651714789723e-11!GO:0003743;translation initiation factor activity;8.72944214624754e-11!GO:0032559;adenyl ribonucleotide binding;1.12291035114726e-10!GO:0005761;mitochondrial ribosome;1.18010743254504e-10!GO:0000313;organellar ribosome;1.18010743254504e-10!GO:0005768;endosome;1.54200336656533e-10!GO:0030554;adenyl nucleotide binding;1.58609312010961e-10!GO:0006446;regulation of translational initiation;2.10552504664578e-10!GO:0009259;ribonucleotide metabolic process;2.38082782775961e-10!GO:0003676;nucleic acid binding;2.97461674173918e-10!GO:0048519;negative regulation of biological process;3.55451235259309e-10!GO:0006163;purine nucleotide metabolic process;4.10195935002525e-10!GO:0003712;transcription cofactor activity;4.76341107992015e-10!GO:0009150;purine ribonucleotide metabolic process;5.16910911453836e-10!GO:0031965;nuclear membrane;5.86946331299021e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.38831597198878e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;6.41663059126e-10!GO:0000375;RNA splicing, via transesterification reactions;6.41663059126e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.41663059126e-10!GO:0044431;Golgi apparatus part;1.19911718612018e-09!GO:0006164;purine nucleotide biosynthetic process;2.00973410815107e-09!GO:0043687;post-translational protein modification;2.13839960440637e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.4358608655496e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.75236259644289e-09!GO:0009260;ribonucleotide biosynthetic process;3.61713461580352e-09!GO:0006913;nucleocytoplasmic transport;3.67418682777967e-09!GO:0009055;electron carrier activity;3.7877919362541e-09!GO:0008565;protein transporter activity;3.83774305115665e-09!GO:0043069;negative regulation of programmed cell death;4.10680020745872e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.16449922207483e-09!GO:0009144;purine nucleoside triphosphate metabolic process;4.16449922207483e-09!GO:0009141;nucleoside triphosphate metabolic process;5.29056634690215e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.41958631484885e-09!GO:0016887;ATPase activity;6.277798034497e-09!GO:0051169;nuclear transport;6.28928807081372e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.72607426886738e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.46689649755232e-09!GO:0043066;negative regulation of apoptosis;1.17141985239896e-08!GO:0042623;ATPase activity, coupled;1.25382426634218e-08!GO:0015986;ATP synthesis coupled proton transport;1.25382426634218e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.25382426634218e-08!GO:0019829;cation-transporting ATPase activity;1.28116555997777e-08!GO:0003924;GTPase activity;1.37820099086391e-08!GO:0008639;small protein conjugating enzyme activity;1.46633421218296e-08!GO:0016604;nuclear body;1.8447302808773e-08!GO:0005788;endoplasmic reticulum lumen;1.86126029205079e-08!GO:0043067;regulation of programmed cell death;1.95056557749377e-08!GO:0016070;RNA metabolic process;2.13378409633146e-08!GO:0046034;ATP metabolic process;2.21342910354287e-08!GO:0044453;nuclear membrane part;2.26462607710716e-08!GO:0030120;vesicle coat;2.45813269766066e-08!GO:0030662;coated vesicle membrane;2.45813269766066e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.81974099496378e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.81974099496378e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.81974099496378e-08!GO:0042981;regulation of apoptosis;3.0240645555459e-08!GO:0004842;ubiquitin-protein ligase activity;3.04582043601663e-08!GO:0007049;cell cycle;3.43447840498092e-08!GO:0006916;anti-apoptosis;3.84990278405478e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.16133040670706e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.35394555515419e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.35394555515419e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.35394555515419e-08!GO:0009056;catabolic process;4.47002689244822e-08!GO:0006974;response to DNA damage stimulus;6.40688155037901e-08!GO:0019787;small conjugating protein ligase activity;6.50549376800378e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.13717162367079e-08!GO:0031988;membrane-bound vesicle;1.12842625759387e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.15910607508562e-07!GO:0005773;vacuole;1.24315268928888e-07!GO:0016491;oxidoreductase activity;1.31448879219504e-07!GO:0051246;regulation of protein metabolic process;1.39646248404854e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.57508784545807e-07!GO:0048475;coated membrane;1.59043063039494e-07!GO:0030117;membrane coat;1.59043063039494e-07!GO:0042254;ribosome biogenesis and assembly;1.95543476823788e-07!GO:0006754;ATP biosynthetic process;2.09003714831604e-07!GO:0006753;nucleoside phosphate metabolic process;2.09003714831604e-07!GO:0017038;protein import;2.35830125734617e-07!GO:0016607;nuclear speck;2.67514071566295e-07!GO:0016881;acid-amino acid ligase activity;2.75920678540138e-07!GO:0000139;Golgi membrane;2.77427070012939e-07!GO:0051188;cofactor biosynthetic process;2.89264213133614e-07!GO:0003714;transcription corepressor activity;2.90170677297513e-07!GO:0016787;hydrolase activity;3.99600514771237e-07!GO:0031252;leading edge;4.00152113610602e-07!GO:0031982;vesicle;4.54246094831401e-07!GO:0006366;transcription from RNA polymerase II promoter;5.16952423243028e-07!GO:0009117;nucleotide metabolic process;5.37808811803358e-07!GO:0009060;aerobic respiration;5.59093521121118e-07!GO:0031410;cytoplasmic vesicle;6.42300246186737e-07!GO:0044440;endosomal part;7.48286541172837e-07!GO:0010008;endosome membrane;7.48286541172837e-07!GO:0005770;late endosome;7.77316417462441e-07!GO:0050794;regulation of cellular process;7.87013618796762e-07!GO:0004386;helicase activity;8.37505632234284e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.52880888814145e-07!GO:0005798;Golgi-associated vesicle;8.93315677884654e-07!GO:0051789;response to protein stimulus;1.48727297912709e-06!GO:0006986;response to unfolded protein;1.48727297912709e-06!GO:0000323;lytic vacuole;2.11552332703926e-06!GO:0005764;lysosome;2.11552332703926e-06!GO:0045333;cellular respiration;2.64740171478629e-06!GO:0006399;tRNA metabolic process;3.03240939425466e-06!GO:0006461;protein complex assembly;3.23849623261739e-06!GO:0006281;DNA repair;3.72129703322805e-06!GO:0065002;intracellular protein transport across a membrane;3.7948362956305e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.82460762138208e-06!GO:0004812;aminoacyl-tRNA ligase activity;3.82460762138208e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.82460762138208e-06!GO:0043038;amino acid activation;4.32082710855865e-06!GO:0006418;tRNA aminoacylation for protein translation;4.32082710855865e-06!GO:0043039;tRNA aminoacylation;4.32082710855865e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.75710339680985e-06!GO:0005643;nuclear pore;4.75710339680985e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;4.89996760494003e-06!GO:0016564;transcription repressor activity;4.89996760494003e-06!GO:0008026;ATP-dependent helicase activity;5.2495077921297e-06!GO:0006752;group transfer coenzyme metabolic process;5.27905620516401e-06!GO:0000074;regulation of progression through cell cycle;5.33493011103845e-06!GO:0009719;response to endogenous stimulus;5.38791915656316e-06!GO:0051726;regulation of cell cycle;5.40982947403522e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.48996947146778e-06!GO:0006793;phosphorus metabolic process;6.01484641504015e-06!GO:0006796;phosphate metabolic process;6.01484641504015e-06!GO:0051187;cofactor catabolic process;7.84561610404608e-06!GO:0009108;coenzyme biosynthetic process;7.94345483985313e-06!GO:0031324;negative regulation of cellular metabolic process;8.47668920550333e-06!GO:0007005;mitochondrion organization and biogenesis;8.96252992959512e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.02390911651708e-05!GO:0008361;regulation of cell size;1.03808574124244e-05!GO:0006323;DNA packaging;1.13152381087474e-05!GO:0006099;tricarboxylic acid cycle;1.16617046381114e-05!GO:0046356;acetyl-CoA catabolic process;1.16617046381114e-05!GO:0045786;negative regulation of progression through cell cycle;1.21560843249997e-05!GO:0051170;nuclear import;1.21623851111483e-05!GO:0005525;GTP binding;1.48907567515262e-05!GO:0008654;phospholipid biosynthetic process;1.58095520874059e-05!GO:0005769;early endosome;1.65172385599287e-05!GO:0016049;cell growth;1.67191752479259e-05!GO:0032446;protein modification by small protein conjugation;1.98200850482249e-05!GO:0016853;isomerase activity;2.00019025581099e-05!GO:0016310;phosphorylation;2.14232877672354e-05!GO:0045259;proton-transporting ATP synthase complex;2.1457086704511e-05!GO:0006613;cotranslational protein targeting to membrane;2.14970362031724e-05!GO:0006606;protein import into nucleus;2.33249786232204e-05!GO:0030133;transport vesicle;2.33263025877214e-05!GO:0046930;pore complex;2.34655927450815e-05!GO:0006403;RNA localization;2.38708624685478e-05!GO:0016740;transferase activity;2.47778634816101e-05!GO:0009109;coenzyme catabolic process;2.55469404096274e-05!GO:0022402;cell cycle process;2.58801393361222e-05!GO:0016567;protein ubiquitination;2.74165297384966e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.98857796845771e-05!GO:0050657;nucleic acid transport;3.14077246492413e-05!GO:0051236;establishment of RNA localization;3.14077246492413e-05!GO:0050658;RNA transport;3.14077246492413e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.25668435186909e-05!GO:0001558;regulation of cell growth;3.65839580834002e-05!GO:0009892;negative regulation of metabolic process;3.76413797098986e-05!GO:0006084;acetyl-CoA metabolic process;3.78330870678596e-05!GO:0045454;cell redox homeostasis;4.36316662128774e-05!GO:0048522;positive regulation of cellular process;4.44884381766035e-05!GO:0004298;threonine endopeptidase activity;4.68848155883926e-05!GO:0031968;organelle outer membrane;4.87396048572281e-05!GO:0000245;spliceosome assembly;5.21561651769233e-05!GO:0030867;rough endoplasmic reticulum membrane;5.99514701226339e-05!GO:0043566;structure-specific DNA binding;6.04191632634553e-05!GO:0006091;generation of precursor metabolites and energy;6.24718090226891e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;7.18811899643548e-05!GO:0019867;outer membrane;7.41108218955301e-05!GO:0016563;transcription activator activity;7.78629814151021e-05!GO:0050789;regulation of biological process;9.48555220437416e-05!GO:0033116;ER-Golgi intermediate compartment membrane;9.57679695283341e-05!GO:0051276;chromosome organization and biogenesis;9.80031481123992e-05!GO:0003724;RNA helicase activity;9.82768078961477e-05!GO:0000151;ubiquitin ligase complex;0.000103813391511536!GO:0016859;cis-trans isomerase activity;0.000106136494151232!GO:0032561;guanyl ribonucleotide binding;0.000106276640701005!GO:0019001;guanyl nucleotide binding;0.000106276640701005!GO:0005905;coated pit;0.000108506231199163!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000113139052063083!GO:0015399;primary active transmembrane transporter activity;0.000113139052063083!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00011502082851934!GO:0005762;mitochondrial large ribosomal subunit;0.000130555577382174!GO:0000315;organellar large ribosomal subunit;0.000130555577382174!GO:0003697;single-stranded DNA binding;0.000136511343347101!GO:0007243;protein kinase cascade;0.000142446007190164!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000157433696385619!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000161785632325127!GO:0030029;actin filament-based process;0.000190507013571362!GO:0004576;oligosaccharyl transferase activity;0.000204100190190594!GO:0044262;cellular carbohydrate metabolic process;0.000221246850858802!GO:0008250;oligosaccharyl transferase complex;0.000230243246074635!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000243740947503662!GO:0006333;chromatin assembly or disassembly;0.000248643992499452!GO:0005667;transcription factor complex;0.000251649906252954!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000256698726184136!GO:0006364;rRNA processing;0.00026607968986525!GO:0016568;chromatin modification;0.000277048098772915!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000301033445426981!GO:0015630;microtubule cytoskeleton;0.000311042755493129!GO:0006612;protein targeting to membrane;0.000311390743799593!GO:0065004;protein-DNA complex assembly;0.000320249168481612!GO:0003713;transcription coactivator activity;0.000337895198479023!GO:0008610;lipid biosynthetic process;0.00034159395843278!GO:0006260;DNA replication;0.000356911457861396!GO:0016072;rRNA metabolic process;0.000358026791899962!GO:0005741;mitochondrial outer membrane;0.000395206182884234!GO:0005048;signal sequence binding;0.000401419387572457!GO:0007264;small GTPase mediated signal transduction;0.000410663019120767!GO:0043021;ribonucleoprotein binding;0.000434613841641382!GO:0005791;rough endoplasmic reticulum;0.000436970581869264!GO:0019899;enzyme binding;0.000454515176248887!GO:0005885;Arp2/3 protein complex;0.00046662657095924!GO:0009165;nucleotide biosynthetic process;0.000490672285868889!GO:0016126;sterol biosynthetic process;0.000496783518850799!GO:0001726;ruffle;0.000505627947670582!GO:0051427;hormone receptor binding;0.000559003511983887!GO:0006891;intra-Golgi vesicle-mediated transport;0.000559648247465838!GO:0016779;nucleotidyltransferase activity;0.000559648247465838!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000564657768244405!GO:0018196;peptidyl-asparagine modification;0.000574781238559198!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000574781238559198!GO:0005813;centrosome;0.000607205884940088!GO:0051028;mRNA transport;0.000612655864004414!GO:0022890;inorganic cation transmembrane transporter activity;0.000677526931749346!GO:0030663;COPI coated vesicle membrane;0.000677791501864127!GO:0030126;COPI vesicle coat;0.000677791501864127!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000822180301300669!GO:0015980;energy derivation by oxidation of organic compounds;0.000868144195328553!GO:0035257;nuclear hormone receptor binding;0.00100578416844419!GO:0051920;peroxiredoxin activity;0.00105494589123198!GO:0019843;rRNA binding;0.00115534578562051!GO:0008092;cytoskeletal protein binding;0.00115816008407566!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0012139539063893!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00122604844028555!GO:0030137;COPI-coated vesicle;0.00125124244029935!GO:0006818;hydrogen transport;0.00125371007208556!GO:0000785;chromatin;0.00129416057457964!GO:0016481;negative regulation of transcription;0.00132660080368876!GO:0008186;RNA-dependent ATPase activity;0.00136889735321664!GO:0008047;enzyme activator activity;0.00141363403221951!GO:0043492;ATPase activity, coupled to movement of substances;0.00143788384061377!GO:0046474;glycerophospholipid biosynthetic process;0.00143788384061377!GO:0031072;heat shock protein binding;0.00143950283703617!GO:0005815;microtubule organizing center;0.00156426450866507!GO:0006892;post-Golgi vesicle-mediated transport;0.00167116008599336!GO:0015992;proton transport;0.00167116008599336!GO:0016044;membrane organization and biogenesis;0.00168179299933662!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00169012103924289!GO:0030658;transport vesicle membrane;0.00172382045779564!GO:0040008;regulation of growth;0.00177520639039348!GO:0043623;cellular protein complex assembly;0.00178099913468358!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00188558892980021!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00188558892980021!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00188558892980021!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00196191795143591!GO:0048518;positive regulation of biological process;0.00196743738153029!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00198850922832823!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00198850922832823!GO:0007033;vacuole organization and biogenesis;0.00201350426956944!GO:0007010;cytoskeleton organization and biogenesis;0.00205152833947333!GO:0030132;clathrin coat of coated pit;0.00211815488795856!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00212901357631019!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00216631099262269!GO:0030027;lamellipodium;0.00218159208044137!GO:0005694;chromosome;0.00226530328299871!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00228432577999448!GO:0048468;cell development;0.00238550029002913!GO:0006950;response to stress;0.00244429739951757!GO:0065007;biological regulation;0.00254199694154712!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00256610180339943!GO:0016197;endosome transport;0.00256610180339943!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00271029002596667!GO:0007040;lysosome organization and biogenesis;0.00272390669024864!GO:0045045;secretory pathway;0.00275039406049947!GO:0006695;cholesterol biosynthetic process;0.00293789476485567!GO:0000314;organellar small ribosomal subunit;0.00319410358662873!GO:0005763;mitochondrial small ribosomal subunit;0.00319410358662873!GO:0048471;perinuclear region of cytoplasm;0.00340904134099705!GO:0007050;cell cycle arrest;0.00350333411397126!GO:0004004;ATP-dependent RNA helicase activity;0.00354258512744115!GO:0004177;aminopeptidase activity;0.0035908738109612!GO:0048500;signal recognition particle;0.0037219611474482!GO:0031418;L-ascorbic acid binding;0.00377777738444902!GO:0006334;nucleosome assembly;0.00380911384315768!GO:0065009;regulation of a molecular function;0.00387783935003874!GO:0009967;positive regulation of signal transduction;0.00412808088040564!GO:0031543;peptidyl-proline dioxygenase activity;0.00414931726931191!GO:0030127;COPII vesicle coat;0.00417931800265675!GO:0012507;ER to Golgi transport vesicle membrane;0.00417931800265675!GO:0030134;ER to Golgi transport vesicle;0.0041876848915528!GO:0000278;mitotic cell cycle;0.00440412634947826!GO:0030176;integral to endoplasmic reticulum membrane;0.00443421082264437!GO:0051168;nuclear export;0.00448915587145728!GO:0030118;clathrin coat;0.00450095985109!GO:0030659;cytoplasmic vesicle membrane;0.00455713208125967!GO:0043681;protein import into mitochondrion;0.0045726180263749!GO:0051252;regulation of RNA metabolic process;0.00474434865922206!GO:0030660;Golgi-associated vesicle membrane;0.00484759183598381!GO:0043284;biopolymer biosynthetic process;0.0048723196820816!GO:0044427;chromosomal part;0.00490488187839401!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00525712771054191!GO:0046467;membrane lipid biosynthetic process;0.00525832918989717!GO:0008632;apoptotic program;0.00570058556349621!GO:0006509;membrane protein ectodomain proteolysis;0.00585857570994944!GO:0033619;membrane protein proteolysis;0.00585857570994944!GO:0005774;vacuolar membrane;0.00585857570994944!GO:0006650;glycerophospholipid metabolic process;0.00597968164283921!GO:0017166;vinculin binding;0.00629640719732657!GO:0031497;chromatin assembly;0.00654110465423171!GO:0003690;double-stranded DNA binding;0.00693022365621053!GO:0048487;beta-tubulin binding;0.00697144997360447!GO:0051087;chaperone binding;0.00700998968421609!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00707453138973648!GO:0006740;NADPH regeneration;0.00709128596279573!GO:0006098;pentose-phosphate shunt;0.00709128596279573!GO:0006414;translational elongation;0.00711271802374317!GO:0003899;DNA-directed RNA polymerase activity;0.00721919901230915!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00725226480840263!GO:0045047;protein targeting to ER;0.00725226480840263!GO:0006626;protein targeting to mitochondrion;0.00733731504040441!GO:0046483;heterocycle metabolic process;0.0073738380384108!GO:0042802;identical protein binding;0.00740501905509811!GO:0006979;response to oxidative stress;0.00752815454000517!GO:0019798;procollagen-proline dioxygenase activity;0.00755124113800208!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00759871750032841!GO:0015631;tubulin binding;0.00798218308304813!GO:0003729;mRNA binding;0.00806205101947137!GO:0045792;negative regulation of cell size;0.00821603434029699!GO:0031901;early endosome membrane;0.00877010463333869!GO:0031902;late endosome membrane;0.00900636389336756!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00901168603169711!GO:0005096;GTPase activator activity;0.00903400768724406!GO:0003746;translation elongation factor activity;0.00905799135687863!GO:0032940;secretion by cell;0.00948299160197416!GO:0046519;sphingoid metabolic process;0.00948299160197416!GO:0033673;negative regulation of kinase activity;0.00951447147098225!GO:0006469;negative regulation of protein kinase activity;0.00951447147098225!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00966963819946759!GO:0035258;steroid hormone receptor binding;0.00977477879729652!GO:0008139;nuclear localization sequence binding;0.00977477879729652!GO:0008312;7S RNA binding;0.00981334614844238!GO:0030308;negative regulation of cell growth;0.00989688891227542!GO:0006839;mitochondrial transport;0.0100866772505089!GO:0051348;negative regulation of transferase activity;0.0103069047769931!GO:0044433;cytoplasmic vesicle part;0.0105296967155533!GO:0006383;transcription from RNA polymerase III promoter;0.010969729230757!GO:0046489;phosphoinositide biosynthetic process;0.0112204049077122!GO:0006417;regulation of translation;0.0119187383711961!GO:0003711;transcription elongation regulator activity;0.0121234774873166!GO:0007006;mitochondrial membrane organization and biogenesis;0.0123785731805398!GO:0006402;mRNA catabolic process;0.0126143594014323!GO:0051540;metal cluster binding;0.0128372489016969!GO:0051536;iron-sulfur cluster binding;0.0128372489016969!GO:0030125;clathrin vesicle coat;0.0131698925418743!GO:0030665;clathrin coated vesicle membrane;0.0131698925418743!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0133208597964476!GO:0012506;vesicle membrane;0.0133451017604743!GO:0006354;RNA elongation;0.0133682258305924!GO:0051287;NAD binding;0.0134035316644984!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0134194864814945!GO:0006672;ceramide metabolic process;0.013463605955282!GO:0016860;intramolecular oxidoreductase activity;0.0135069800764296!GO:0044437;vacuolar part;0.0135712898039743!GO:0007034;vacuolar transport;0.0139152198815626!GO:0016363;nuclear matrix;0.0144198170304732!GO:0004674;protein serine/threonine kinase activity;0.0152984374076015!GO:0016272;prefoldin complex;0.0153679764751773!GO:0030119;AP-type membrane coat adaptor complex;0.0153814125185826!GO:0006007;glucose catabolic process;0.0157812719748227!GO:0005862;muscle thin filament tropomyosin;0.0158764734729913!GO:0007030;Golgi organization and biogenesis;0.0159777474251448!GO:0030041;actin filament polymerization;0.0160657577013264!GO:0045941;positive regulation of transcription;0.0160691385911877!GO:0004228;gelatinase A activity;0.0161366928516792!GO:0001955;blood vessel maturation;0.0161366928516792!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.016760731543404!GO:0015002;heme-copper terminal oxidase activity;0.016760731543404!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.016760731543404!GO:0004129;cytochrome-c oxidase activity;0.016760731543404!GO:0051128;regulation of cellular component organization and biogenesis;0.0172335992834428!GO:0045892;negative regulation of transcription, DNA-dependent;0.0175617290280667!GO:0051272;positive regulation of cell motility;0.0176371280698607!GO:0040017;positive regulation of locomotion;0.0176371280698607!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0183302440947816!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0183302440947816!GO:0003756;protein disulfide isomerase activity;0.0185230168244565!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0185230168244565!GO:0006595;polyamine metabolic process;0.0197518457880957!GO:0051270;regulation of cell motility;0.0199515789149261!GO:0006607;NLS-bearing substrate import into nucleus;0.0200820579867656!GO:0005869;dynactin complex;0.0202981497307046!GO:0050811;GABA receptor binding;0.0205043470696233!GO:0043022;ribosome binding;0.0207862816151073!GO:0006497;protein amino acid lipidation;0.0209467856897033!GO:0030503;regulation of cell redox homeostasis;0.0213876164103669!GO:0043488;regulation of mRNA stability;0.0215340118422881!GO:0043487;regulation of RNA stability;0.0215340118422881!GO:0031529;ruffle organization and biogenesis;0.0215340118422881!GO:0000339;RNA cap binding;0.0215340118422881!GO:0022408;negative regulation of cell-cell adhesion;0.0221581730220559!GO:0005581;collagen;0.0222659816731885!GO:0045893;positive regulation of transcription, DNA-dependent;0.0225719184111137!GO:0000059;protein import into nucleus, docking;0.0225719184111137!GO:0001516;prostaglandin biosynthetic process;0.0225719184111137!GO:0046457;prostanoid biosynthetic process;0.0225719184111137!GO:0006778;porphyrin metabolic process;0.0226771124653985!GO:0033013;tetrapyrrole metabolic process;0.0226771124653985!GO:0000096;sulfur amino acid metabolic process;0.0228159856146653!GO:0005765;lysosomal membrane;0.0230287674392124!GO:0001666;response to hypoxia;0.0234181558680123!GO:0031625;ubiquitin protein ligase binding;0.0234181558680123!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0238110842567176!GO:0000209;protein polyubiquitination;0.0242034731533137!GO:0019318;hexose metabolic process;0.0242503414850989!GO:0006739;NADP metabolic process;0.0248958043627632!GO:0035035;histone acetyltransferase binding;0.0250419863656135!GO:0008243;plasminogen activator activity;0.0262037490805347!GO:0051101;regulation of DNA binding;0.0263750035027595!GO:0030131;clathrin adaptor complex;0.0263750035027595!GO:0005832;chaperonin-containing T-complex;0.0263750035027595!GO:0001872;zymosan binding;0.0265709692982688!GO:0001878;response to yeast;0.0265709692982688!GO:0051539;4 iron, 4 sulfur cluster binding;0.026633942081072!GO:0000049;tRNA binding;0.0268487510068507!GO:0030433;ER-associated protein catabolic process;0.0268715179308321!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0268715179308321!GO:0019752;carboxylic acid metabolic process;0.0272545315779152!GO:0008234;cysteine-type peptidase activity;0.027267806685673!GO:0033559;unsaturated fatty acid metabolic process;0.0275354703234291!GO:0006636;unsaturated fatty acid biosynthetic process;0.0275354703234291!GO:0001952;regulation of cell-matrix adhesion;0.0276307694328688!GO:0004287;prolyl oligopeptidase activity;0.0279641577798444!GO:0050662;coenzyme binding;0.0281101488246078!GO:0030032;lamellipodium biogenesis;0.028149204628132!GO:0003684;damaged DNA binding;0.0284870825766828!GO:0005637;nuclear inner membrane;0.0293860228066231!GO:0005996;monosaccharide metabolic process;0.0295350243463164!GO:0009889;regulation of biosynthetic process;0.0295595758844018!GO:0031326;regulation of cellular biosynthetic process;0.0295595758844018!GO:0006082;organic acid metabolic process;0.0298634591290482!GO:0045926;negative regulation of growth;0.0298949754560908!GO:0005684;U2-dependent spliceosome;0.030072795286211!GO:0008147;structural constituent of bone;0.0305151196683624!GO:0006769;nicotinamide metabolic process;0.0306416242379323!GO:0003779;actin binding;0.0306416242379323!GO:0031124;mRNA 3'-end processing;0.0314003201982873!GO:0030384;phosphoinositide metabolic process;0.0320083449643207!GO:0001953;negative regulation of cell-matrix adhesion;0.0320221394764912!GO:0030521;androgen receptor signaling pathway;0.0320221394764912!GO:0022406;membrane docking;0.0323473671613374!GO:0048278;vesicle docking;0.0323473671613374!GO:0005801;cis-Golgi network;0.0325538679825876!GO:0016125;sterol metabolic process;0.0329267342885689!GO:0006790;sulfur metabolic process;0.0329600235247176!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0331486575369285!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0331486575369285!GO:0008154;actin polymerization and/or depolymerization;0.033712013672488!GO:0008180;signalosome;0.0337261586388869!GO:0006611;protein export from nucleus;0.0342946491972164!GO:0006289;nucleotide-excision repair;0.0344110594864697!GO:0009112;nucleobase metabolic process;0.0347802974369912!GO:0006984;ER-nuclear signaling pathway;0.0351750512088794!GO:0030140;trans-Golgi network transport vesicle;0.0360597469554404!GO:0006518;peptide metabolic process;0.0360597469554404!GO:0006767;water-soluble vitamin metabolic process;0.0360597469554404!GO:0042168;heme metabolic process;0.0364908669575315!GO:0030984;kininogen binding;0.0365648264074684!GO:0004213;cathepsin B activity;0.0365648264074684!GO:0015248;sterol transporter activity;0.0368473602605428!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0368958747068642!GO:0030833;regulation of actin filament polymerization;0.036917748826693!GO:0051329;interphase of mitotic cell cycle;0.0369990873053113!GO:0006066;alcohol metabolic process;0.0370070836051823!GO:0007041;lysosomal transport;0.0389454534896257!GO:0042158;lipoprotein biosynthetic process;0.0394256382192251!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0396504106587264!GO:0030145;manganese ion binding;0.0398096137437445!GO:0043433;negative regulation of transcription factor activity;0.0406984155668321!GO:0043407;negative regulation of MAP kinase activity;0.0408367993889011!GO:0016584;nucleosome positioning;0.0409850353445562!GO:0009116;nucleoside metabolic process;0.0410619686374856!GO:0030508;thiol-disulfide exchange intermediate activity;0.0410619686374856!GO:0051336;regulation of hydrolase activity;0.0410831841017712!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0412067916383343!GO:0007021;tubulin folding;0.0416297428144999!GO:0006118;electron transport;0.0421508153770814!GO:0030913;paranodal junction assembly;0.0428393454817356!GO:0032288;myelin formation;0.0428393454817356!GO:0006458;'de novo' protein folding;0.0428393454817356!GO:0051084;'de novo' posttranslational protein folding;0.0428393454817356!GO:0040011;locomotion;0.0434816786431052!GO:0030880;RNA polymerase complex;0.0438105606277722!GO:0043065;positive regulation of apoptosis;0.0442535363793568!GO:0019222;regulation of metabolic process;0.0445778110751976!GO:0006904;vesicle docking during exocytosis;0.0446907838736379!GO:0006401;RNA catabolic process;0.0453459803660395!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0453459803660395!GO:0005099;Ras GTPase activator activity;0.0455077054084299!GO:0006643;membrane lipid metabolic process;0.0458599271679855!GO:0008022;protein C-terminus binding;0.0461641110936577!GO:0006897;endocytosis;0.0462064710137733!GO:0010324;membrane invagination;0.0462064710137733!GO:0046426;negative regulation of JAK-STAT cascade;0.0462064710137733!GO:0000287;magnesium ion binding;0.0463866379009081!GO:0008320;protein transmembrane transporter activity;0.0464305490005898!GO:0005520;insulin-like growth factor binding;0.0466047829345986!GO:0007242;intracellular signaling cascade;0.0467035446330523!GO:0040012;regulation of locomotion;0.0467035446330523!GO:0043068;positive regulation of programmed cell death;0.0467035446330523!GO:0044255;cellular lipid metabolic process;0.0470858764315261!GO:0050681;androgen receptor binding;0.0471577721385925!GO:0045334;clathrin-coated endocytic vesicle;0.0483269542579058!GO:0030911;TPR domain binding;0.049380496446491!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0494849269594463!GO:0010257;NADH dehydrogenase complex assembly;0.0494849269594463!GO:0033108;mitochondrial respiratory chain complex assembly;0.0494849269594463!GO:0051301;cell division;0.0497903059375421!GO:0016301;kinase activity;0.0497903059375421
 |sample_id=11842
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=bone marrow
 |top_motifs=PAX1,9:1.68678957354;PPARG:1.47599849058;HIF1A:1.4565334963;ALX4:1.44660158498;GZF1:1.21052328684;RXR{A,B,G}:1.11769454398;TAL1_TCF{3,4,12}:1.10977220969;ZNF238:1.03449498218;UFEwm:1.00705819997;ZBTB6:0.962033212506;HSF1,2:0.961999382956;ATF6:0.94073670851;NFE2L1:0.936721720626;SRF:0.910583350706;bHLH_family:0.863635600146;TLX2:0.860571698448;ESR1:0.840287113505;PAX8:0.838569597046;NFATC1..3:0.833105186468;TEAD1:0.830625380704;RXRA_VDR{dimer}:0.79600841751;TLX1..3_NFIC{dimer}:0.79129651063;LHX3,4:0.790481180178;HMX1:0.770202575932;ALX1:0.713559365663;AHR_ARNT_ARNT2:0.686315535695;TFAP4:0.684683158551;HOX{A4,D4}:0.680927118079;HLF:0.660625878919;POU3F1..4:0.65744411928;GTF2A1,2:0.635058090863;PAX4:0.607328107601;MAFB:0.589040431058;MYFfamily:0.580756747209;HMGA1,2:0.574722552574;PRDM1:0.550375306963;NR3C1:0.531049672041;HOX{A5,B5}:0.505583874018;EVI1:0.495367883888;ONECUT1,2:0.492460249167;NHLH1,2:0.490740984774;ZIC1..3:0.477447492166;TP53:0.473655144751;SMAD1..7,9:0.473245519476;BACH2:0.450936554477;FOS_FOS{B,L1}_JUN{B,D}:0.45071297458;NFE2L2:0.441308027216;TFCP2:0.418002603898;MYBL2:0.401455421928;GLI1..3:0.39445327537;EN1,2:0.389274614868;AR:0.368145635924;MTE{core}:0.363366740365;HES1:0.338365026135;NANOG{mouse}:0.329323266126;GTF2I:0.309371058981;FOSL2:0.294514690969;EBF1:0.289400099827;TBP:0.281999011565;RFX1:0.277335476684;ZBTB16:0.272342644368;PITX1..3:0.266806662415;NFIX:0.262177931149;NR6A1:0.239529332607;NKX2-2,8:0.229130895674;TFAP2{A,C}:0.228306250891;SREBF1,2:0.226551658002;HBP1_HMGB_SSRP1_UBTF:0.226113275938;STAT5{A,B}:0.197862681956;CDX1,2,4:0.188358681015;XCPE1{core}:0.188171494256;FOXD3:0.180104171172;MEF2{A,B,C,D}:0.178561594813;IKZF1:0.169886508866;TFAP2B:0.162946296124;HNF1A:0.153284868502;GFI1B:0.130492049508;BPTF:0.130079403087;NKX3-1:0.12627822775;NFE2:0.121396425834;MZF1:0.108887985175;GATA4:0.101377702035;ZFP161:0.0933406626211;SPZ1:0.0895203250322;NKX3-2:0.0875486052762;PAX6:0.0754011462998;PATZ1:0.0516288958544;EGR1..3:0.0471038090165;ZNF384:0.0295483721703;CDC5L:0.0206229248267;RUNX1..3:0.0122095616734;KLF4:0.0114813915066;XBP1:0.011403834783;PAX3,7:0.00958564553183;NKX2-1,4:-0.000548436578107;SP1:-0.00407609065248;CEBPA,B_DDIT3:-0.02241768133;PAX2:-0.0520218958231;LEF1_TCF7_TCF7L1,2:-0.0785684911797;HIC1:-0.0844639326467;IRF1,2:-0.0865937650472;FOX{I1,J2}:-0.0892399956154;ESRRA:-0.0892428257849;TEF:-0.0909333207085;MED-1{core}:-0.0932662552968;FOXL1:-0.103620224397;JUN:-0.104822881302;SOX17:-0.116849423399;MAZ:-0.129883606975;SOX2:-0.139027141896;ZNF423:-0.139851479002;ATF2:-0.148126693335;TBX4,5:-0.166496902908;RREB1:-0.167887827138;ATF5_CREB3:-0.181774979136;CREB1:-0.185733192842;NFIL3:-0.188343650332;NFKB1_REL_RELA:-0.191373805136;ADNP_IRX_SIX_ZHX:-0.192492488839;MYOD1:-0.19732750821;FOXN1:-0.204466929131;ZNF148:-0.235600306696;POU6F1:-0.24369078754;SOX5:-0.246371182222;REST:-0.249545744809;HNF4A_NR2F1,2:-0.271206379337;NKX6-1,2:-0.27836940412;STAT2,4,6:-0.283183239351;AIRE:-0.292324618265;FOX{D1,D2}:-0.298722633757;EP300:-0.327124884202;NR1H4:-0.337622698064;GATA6:-0.340730836638;ZNF143:-0.342972071323;TFDP1:-0.357778172709;ATF4:-0.358102462772;DBP:-0.359980031691;IRF7:-0.394869480425;TOPORS:-0.398649829342;HAND1,2:-0.410122822637;NRF1:-0.4118212582;NANOG:-0.431634721794;STAT1,3:-0.435001833591;ARID5B:-0.439315352512;CRX:-0.448345703032;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.457904280892;POU1F1:-0.460775062124;PBX1:-0.465133334936;ETS1,2:-0.479786014168;FOXP1:-0.485981480178;POU5F1:-0.486248067904;MTF1:-0.505852362002;FOXM1:-0.516733588987;RFX2..5_RFXANK_RFXAP:-0.527726015862;DMAP1_NCOR{1,2}_SMARC:-0.549162887608;POU2F1..3:-0.560235179024;FOXQ1:-0.564063435107;PAX5:-0.582443398516;LMO2:-0.596551204956;ZEB1:-0.59675387572;ELF1,2,4:-0.602742891174;SPI1:-0.604318394503;GCM1,2:-0.607091484568;ELK1,4_GABP{A,B1}:-0.619285927192;SPIB:-0.625549333231;MYB:-0.646606883516;HOX{A6,A7,B6,B7}:-0.658693887255;E2F1..5:-0.662174466897;YY1:-0.667832374112;OCT4_SOX2{dimer}:-0.677240450713;PRRX1,2:-0.679389334712;HOXA9_MEIS1:-0.681448558659;SNAI1..3:-0.686963950297;IKZF2:-0.69192583375;GFI1:-0.694378863861;TGIF1:-0.70555483138;FOXP3:-0.718802998349;FOX{F1,F2,J1}:-0.73287662825;RORA:-0.776240641474;CUX2:-0.786416937105;VSX1,2:-0.809885038082;FOXO1,3,4:-0.919626742525;BREu{core}:-0.921535721511;NFY{A,B,C}:-0.934887321879;FOXA2:-0.938418514338;T:-0.971155305408;SOX{8,9,10}:-0.998733246924;NKX2-3_NKX2-5:-1.02605130856;RBPJ:-1.1276142834;NR5A1,2:-1.50172366537;PDX1:-1.63938776078;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.68663455915
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11842-124H6;search_select_hide=table117:FF:11842-124H6
 }}

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FF:11842-124H6: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:23, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0