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{{f5samples
{{f5samples
|id=FF:11842-124H6
|DRA_sample_Accession=CAGE@SAMD00005622
|name=mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02-G)
|accession_numbers=CAGE;DRX008566;DRR009438;DRZ000863;DRZ002248;DRZ012213;DRZ013598
|sample_id=11842
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000992,UBERON:0000991,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0002118,UBERON:0003100,UBERON:0000474
|rna_tube_id=124H6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034
|rna_box=124
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:193,DOID:2394,DOID:120
|rna_position=H6
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000272,FF:0000275
|sample_cell_lot=SOC-57-02-G
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr12:66218255..66218304,+!p3@HMGA2!1.59!99.30!HMGA2;;chr19:46801639..46801699,+!p1@HIF3A!1.57!35.73!HIF3A;;chr20:50179368..50179392,-!p2@NFATC2!1.47!36.19!NFATC2;;chr8:11561684..11561751,+!p1@GATA4!1.42!25.52!GATA4;;chr12:66218598..66218645,+!p2@HMGA2!1.39!106.26!HMGA2;;chr1:170632285..170632309,+!p1@PRRX1!1.39!26.45!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.38!62.18!OSR1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.37!22.27!HOXC5;;chr8:55370487..55370503,+!p1@SOX17!1.34!20.88!SOX17;;chr18:19749386..19749404,+!p2@GATA6!1.28!25.52!GATA6;;chr3:141087393..141087426,+!p3@ZBTB38!1.25!65.89!ZBTB38;;chr11:61520075..61520136,+!p1@C11orf9!1.25!35.27!C11orf9;;chr19:45971246..45971265,+!p1@FOSB!1.24!296.98!FOSB;;chr12:66218212..66218244,+!p5@HMGA2!1.18!20.42!HMGA2;;chr11:46299199..46299233,+!p1@CREB3L1!1.17!70.07!CREB3L1;;chr7:44143925..44143970,+!p1@AEBP1!1.14!280.28!AEBP1;;chr6:134210243..134210257,+!p1@TCF21!1.13!12.53!TCF21;;chr3:141105705..141105770,+!p4@ZBTB38!1.09!13.92!ZBTB38;;chr2:102091566..102091581,-!p1@RFX8!1.08!11.14!RFX8;;chr7:44143978..44143989,+!p2@AEBP1!1.07!19.95!AEBP1;;chr12:66218836..66218888,+!p1@HMGA2!1.04!93.27!HMGA2;;chr8:106330656..106330684,+!p1@ZFPM2!1.03!25.99!ZFPM2;;chr12:66218378..66218401,+!p6@HMGA2!1.02!14.85!HMGA2;;chr12:66218443..66218461,+!p8@HMGA2!1.02!12.06!HMGA2;;chr18:19749541..19749557,+!p1@GATA6!1.01!29.23!GATA6;;chr15:96874145..96874166,+!p7@NR2F2!1.01!18.10!NR2F2;;chr12:26277956..26277980,-!p1@BHLHE41!1.00!32.95!BHLHE41;;chr2:239756671..239756732,+!p1@TWIST2!1.00!29.23!TWIST2;;chr3:141121847..141121868,+!p5@ZBTB38!0.99!13.46!ZBTB38;;chr7:1577899..1577943,+!p3@MAFK!0.99!8.82!MAFK;;chr12:66218904..66218913,+!p11@HMGA2!0.99!8.82!HMGA2;;chr15:96873984..96873999,+!p3@NR2F2!0.98!64.04!NR2F2;;chr12:66218183..66218209,+!p4@HMGA2!0.98!16.71!HMGA2;;chr11:46299539..46299620,+!p2@CREB3L1!0.97!14.39!CREB3L1;;chr17:46132044..46132080,+!p4@NFE2L1!0.97!8.35!NFE2L1;;chr2:239756739..239756755,+!p2@TWIST2!0.95!13.92!TWIST2;;chr9:127269661..127269719,-!p1@NR5A1!0.93!7.42!NR5A1;;chr14:75745523..75745537,+!p1@FOS!0.90!878.42!FOS;;chr8:72756063..72756125,-!p1@MSC!0.90!14.39!MSC;;chr1:170632250..170632277,+!p7@PRRX1!0.90!6.96!PRRX1;;chr4:174450089..174450153,-!p2@HAND2!0.90!6.96!HAND2;;chr12:77459306..77459365,-!p1@E2F7!0.89!89.56!E2F7;;chr12:115121962..115121987,-!p1@TBX3!0.89!59.86!TBX3;;chr10:64576105..64576133,-!p1@EGR2!0.89!14.39!EGR2;;chr12:66218573..66218596,+!p7@HMGA2!0.89!10.21!HMGA2;;chr7:44143997..44144008,+!p3@AEBP1!0.89!8.82!AEBP1;;chr17:38256799..38256815,-!p3@NR1D1!0.87!12.06!NR1D1;;chr16:31076332..31076388,-!p3@ZNF668!0.87!6.50!ZNF668;;chr2:121493425..121493474,+!p1@GLI2!0.86!14.39!GLI2;;chr22:38598086..38598105,+!p1@MAFF!0.85!69.14!MAFF;;chr15:96874012..96874042,+!p2@NR2F2!0.85!58.47!NR2F2;;chr11:46299443..46299459,+!p4@CREB3L1!0.85!6.03!CREB3L1;;chr19:42636586..42636607,-!p1@POU2F2!0.84!17.17!POU2F2;;chr8:106330696..106330719,+!p2@ZFPM2!0.83!7.42!ZFPM2;;chr22:38598057..38598071,+!p3@MAFF!0.82!13.92!MAFF;;chr1:170633348..170633399,+!p2@PRRX1!0.82!7.89!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.82!5.57!PRRX1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.82!5.57!HOXC5;;chr2:208030647..208030689,-!p1@KLF7!0.81!49.19!KLF7;;chr15:96873921..96873946,+!p1@NR2F2!0.79!160.09!NR2F2;;chr2:176994408..176994492,+!p1@HOXD8!0.79!5.10!HOXD8;;chr12:115122318..115122331,-!p2@TBX3!0.79!5.10!TBX3;;chr12:66218923..66218934,+!p14@HMGA2!0.79!5.10!HMGA2;;chr21:36260343..36260402,-!p6@RUNX1!0.78!8.35!RUNX1;;chr12:26277817..26277863,-!p2@BHLHE41!0.78!6.96!BHLHE41;;chr1:170632959..170632987,+!p4@PRRX1!0.78!5.57!PRRX1;;chr12:52445218..52445237,+!p1@NR4A1!0.77!67.28!NR4A1;;chr15:96874244..96874259,+!p5@NR2F2!0.77!12.53!NR2F2;;chr21:36260295..36260310,-!p3@RUNX1!0.77!8.35!RUNX1;;chr8:72756267..72756296,-!p4@MSC!0.77!7.42!MSC;;chr19:45908292..45908374,-!p1@PPP1R13L!0.76!46.40!PPP1R13L;;chr6:12011943..12012015,+!p2@HIVEP1!0.76!16.71!HIVEP1;;chr15:96869255..96869291,+!p6@NR2F2!0.75!8.82!NR2F2;;chr1:170633058..170633084,+!p5@PRRX1!0.75!4.64!PRRX1;;chr11:125034640..125034655,+!p1@PKNOX2!0.75!4.64!PKNOX2;;chr12:54402745..54402788,+!p1@HOXC8!0.75!4.64!HOXC8;;chr3:138665937..138665968,-!p1@FOXL2!0.75!4.64!FOXL2;;chr5:72744594..72744609,-!p1@FOXD1!0.74!22.74!FOXD1;;chr9:16870710..16870763,-!p1@BNC2!0.74!8.35!BNC2;;chr8:72756667..72756736,-!p2@MSC!0.74!7.42!MSC;;chr8:72756213..72756243,-!p5@MSC!0.74!6.03!MSC;;chr12:66218003..66218018,+!p9@HMGA2!0.74!5.57!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!0.73!5.10!PRRX1;;chr3:141087339..141087387,+!p2@ZBTB38!0.72!48.72!ZBTB38;;chr8:49833948..49833973,-!p2@SNAI2!0.72!30.16!SNAI2;;chr17:1959369..1959388,+!p2@HIC1!0.72!12.06!HIC1;;chr15:96874216..96874236,+!p13@NR2F2!0.72!6.96!NR2F2;;chr12:96588143..96588185,+!p1@ELK3!0.71!57.08!ELK3;;chr17:38256822..38256851,-!p1@NR1D1!0.71!36.66!NR1D1;;chr5:321810..321877,+!p1@AHRR!0.71!14.39!AHRR;;chr12:66218420..66218439,+!p12@HMGA2!0.71!4.18!HMGA2;;chr3:141121820..141121838,+!p9@ZBTB38!0.71!4.18!ZBTB38;;chr20:48807351..48807384,+!p1@CEBPB!0.70!473.78!CEBPB;;chr6:15246200..15246214,+!p2@JARID2!0.70!12.06!JARID2;;chr4:26322267..26322334,+!p3@RBPJ!0.70!10.67!RBPJ;;chrX:66763856..66763896,+!p1@AR!0.70!6.03!AR;;chr12:26277929..26277955,-!p3@BHLHE41!0.70!6.03!BHLHE41;;chr8:72756637..72756664,-!p3@MSC!0.70!4.64!MSC;;chr10:63809106..63809127,+!p1@ARID5B!0.67!57.08!ARID5B;;chr2:145275162..145275202,-!p2@ZEB2!0.67!24.59!ZEB2;;chr11:46299186..46299195,+!p3@CREB3L1!0.67!4.18!CREB3L1;;chr22:21771656..21771662,+!p1@HIC2!0.67!3.71!HIC2;;chr19:54058073..54058088,+!p1@ZNF331!0.67!3.71!ZNF331;;chr1:170632137..170632172,+!p10@PRRX1!0.67!3.71!PRRX1;;chr18:19749353..19749367,+!p4@GATA6!0.67!3.71!GATA6;;chr6:152011654..152011682,+!p1@ESR1!0.67!3.71!ESR1;;chr22:38597987..38598021,+!p2@MAFF!0.66!25.06!MAFF;;chr9:110252035..110252057,-!p1@KLF4!0.65!65.89!KLF4;;chr20:42543441..42543497,+!p1@TOX2!0.65!18.10!TOX2;;chr10:94449703..94449718,+!p1@HHEX!0.65!15.31!HHEX;;chr20:42543506..42543549,+!p2@TOX2!0.65!9.28!TOX2;;chr2:66662281..66662308,+!p1@MEIS1!0.64!13.46!MEIS1;;chr9:102584262..102584276,+!p1@NR4A3!0.64!8.35!NR4A3;;chr9:14313893..14313908,-!p7@NFIB!0.64!5.10!NFIB;;chr5:137804484..137804498,+!p2@EGR1!0.63!15.31!EGR1;;chr20:39946361..39946379,-!p2@ZHX3!0.63!11.14!ZHX3;;chr22:38598042..38598052,+!p4@MAFF!0.63!5.57!MAFF;;chr3:141121871..141121885,+!p13@ZBTB38!0.63!3.25!ZBTB38;;chr1:170632115..170632136,+!p9@PRRX1!0.63!3.25!PRRX1;;chr12:54393880..54393962,+!p1@HOXC9!0.63!3.25!HOXC9;;chr12:54394309..54394336,+!p2@HOXC9!0.63!3.25!HOXC9;;chr9:16705069..16705086,-!p3@BNC2!0.63!3.25!BNC2;;chr17:41622925..41622976,-!p3@ETV4!0.62!5.10!ETV4;;chr15:96869114..96869160,+!p11@NR2F2!0.62!4.64!NR2F2;;chr17:46126136..46126152,+!p1@NFE2L1!0.61!188.86!NFE2L1;;chr2:238536207..238536290,+!p2@LRRFIP1!0.61!35.73!LRRFIP1;;chr14:62162258..62162269,+!p2@HIF1A!0.61!35.27!HIF1A;;chr20:48807456..48807475,+!p3@CEBPB!0.61!6.50!CEBPB;;chr6:34204672..34204692,+!p1@HMGA1!0.60!409.74!HMGA1;;chr14:62162285..62162296,+!p3@HIF1A!0.60!18.56!HIF1A;;chr8:49833978..49833996,-!p1@SNAI2!0.59!72.39!SNAI2;;chr12:27485823..27485868,+!p2@ARNTL2!0.59!13.92!ARNTL2;;chr10:94449649..94449664,+!p3@HHEX!0.59!4.64!HHEX;;chr21:36260463..36260480,-!p9@RUNX1!0.59!4.18!RUNX1;;chr18:3450161..3450183,+!p1@TGIF1!0.58!118.79!TGIF1;;chr15:60884747..60884774,-!p3@RORA!0.58!7.89!RORA;;chr3:5021268..5021282,+!p4@BHLHE40!0.58!6.50!BHLHE40;;chr16:8962202..8962222,-!p3@CARHSP1!0.58!5.57!CARHSP1;;chr18:53068911..53068935,-!p4@TCF4!0.58!3.25!TCF4;;chr15:96869206..96869220,+!p21@NR2F2!0.58!2.78!NR2F2;;chr17:45928443..45928473,-!p2@SP6!0.58!2.78!SP6;;chr1:170632477..170632506,+!p6@PRRX1!0.58!2.78!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.58!2.78!PRRX1;;chr8:72755987..72756002,-!p7@MSC!0.58!2.78!MSC;;chr12:66218469..66218477,+!p16@HMGA2!0.58!2.78!HMGA2;;chr12:66357214..66357233,+!p13@HMGA2!0.58!2.78!HMGA2;;chr3:138665969..138665993,-!p2@FOXL2!0.58!2.78!FOXL2;;chr5:137801160..137801176,+!p1@EGR1!0.57!335.03!EGR1;;chr4:87856129..87856186,+!p1@AFF1!0.57!45.94!AFF1;;chr1:59249688..59249703,-!p3@JUN!0.57!19.95!JUN;;chr20:50721803..50721857,-!p2@ZFP64!0.57!4.64!ZFP64;;chr4:81105027..81105039,+!p3@PRDM8!0.57!3.25!PRDM8;;chr17:41623692..41623715,-!p1@ETV4!0.56!13.46!ETV4;;chr2:66662249..66662267,+!p2@MEIS1!0.56!12.06!MEIS1;;chr3:25469724..25469773,+!p1@RARB!0.56!4.18!RARB;;chr12:80085255..80085284,-!p9@PAWR!0.56!4.18!PAWR;;chr11:65667846..65667868,-!p1@FOSL1!0.55!84.45!FOSL1;;chrX:128657457..128657475,-!p1@SMARCA1!0.55!37.12!SMARCA1;;chr8:77593474..77593612,+!p1@ZFHX4!0.55!12.99!ZFHX4;;chr1:158979851..158979865,+!p5@IFI16!0.55!6.50!IFI16;;chr18:19749517..19749531,+!p3@GATA6!0.55!5.10!GATA6;;chr6:85473156..85473210,-!p2@TBX18!0.55!3.25!TBX18;;chr12:66218152..66218174,+!p10@HMGA2!0.55!2.78!HMGA2;;chr10:22292613..22292674,-!p1@DNAJC1!0.54!93.27!DNAJC1;;chr2:157189180..157189290,-!p1@NR4A2!0.54!15.78!NR4A2;;chr13:74708029..74708077,-!p2@KLF12!0.54!8.35!KLF12;;chr2:74229812..74229867,+!p1@TET3!0.54!7.42!TET3;;chr7:19157043..19157088,-!p2@TWIST1!0.54!7.42!TWIST1;;chr9:102584159..102584174,+!p2@NR4A3!0.54!5.10!NR4A3;;chr8:116681108..116681120,-!p9@TRPS1!0.54!3.25!TRPS1;;chr8:72756023..72756055,-!p6@MSC!0.54!3.25!MSC;;chr11:65686732..65686756,+!p2@DRAP1!0.53!12.53!DRAP1;;chr18:3450293..3450304,+!p4@TGIF1!0.53!6.96!TGIF1;;chr19:31840130..31840160,-!p2@TSHZ3!0.53!4.18!TSHZ3;;chr7:137686763..137686784,-!p5@CREB3L2!0.52!4.64!CREB3L2;;chr12:80085061..80085119,-!p6@PAWR!0.52!4.18!PAWR;;chr17:41623009..41623053,-!p4@ETV4!0.52!4.18!ETV4;;chr15:96869292..96869320,+!p15@NR2F2!0.52!3.71!NR2F2;;chr15:96875041..96875052,+!p17@NR2F2!0.52!3.71!NR2F2;;chr15:96876966..96877017,+!p12@NR2F2!0.52!3.71!NR2F2;;chr20:48807648..48807671,+!p9@CEBPB!0.52!3.71!CEBPB;;chr2:166326200..166326216,+!p1@CSRNP3!0.52!3.71!CSRNP3;;chrX:66763815..66763854,+!p2@AR!0.52!3.25!AR;;chr15:83953397..83953425,-!p1@BNC1!0.52!2.78!BNC1;;chr15:80843484..80843499,+!p5@ARNT2!0.52!2.32!ARNT2;;chr15:96869165..96869183,+!p20@NR2F2!0.52!2.32!NR2F2;;ch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X1;;chr12:54447599..54447630,+!p3@HOXC4!0.20!0.93!HOXC4;;chr3:107241792..107241845,+!p1@BBX!0.19!31.55!BBX;;chr20:48807875..48807982,+!p2@CEBPB!0.19!30.63!CEBPB;;chr13:73633131..73633149,+!p1@KLF5!0.19!14.39!KLF5;;chr19:42724436..42724507,+!p1@ZNF526!0.19!11.14!ZNF526;;chr8:144329092..144329140,+!p1@ZFP41!0.19!9.28!ZFP41;;chr18:32870148..32870223,-!p1@ZSCAN30!0.19!9.28!ZSCAN30;;chr22:24093267..24093327,-!p1@ZNF70!0.19!8.82!ZNF70;;chr15:50647370..50647405,-!p2@GABPB1!0.19!6.96!GABPB1;;chr13:74708504..74708549,-!p1@KLF12!0.19!5.57!KLF12;;chr7:28448965..28448994,+!p2@CREB5!0.19!4.18!CREB5;;chr19:36980429..36980448,-!p1@ZNF566!0.19!3.25!ZNF566;;chr9:3525727..3525828,-!p2@RFX3!0.19!2.78!RFX3;;chr19:42759300..42759324,-!p2@ERF!0.19!2.78!ERF;;chr1:33938236..33938267,+!p1@ZSCAN20!0.19!2.78!ZSCAN20;;chr7:148959065..148959126,+!p2@ZNF783!0.19!2.32!ZNF783;;chr16:31724618..31724630,+!p2@ZNF720!0.19!1.86!ZNF720;;chr11:695215..695231,-!p2@DEAF1!0.19!1.86!DEAF1;;chr12:52430894..52430952,+!p3@NR4A1!0.19!1.86!NR4A1;;chr6:144329531..144329546,-!p5@PLAGL1!0.19!1.39!PLAGL1;;chr1:8484294..8484307,-!p16@RERE!0.19!1.39!RERE;;chr16:30582888..30582923,-!p3@ZNF688!0.19!1.39!ZNF688;;chr17:20492136..20492165,+!p1@MEIS3P2!0.19!1.39!MEIS3P2;;chrX:70504244..70504278,+!p4@NONO!0.19!1.39!NONO;;chr6:21597431..21597447,+!p8@SOX4!0.19!0.93!SOX4;;chr7:127032330..127032356,-!p3@ZNF800!0.19!0.93!ZNF800;;chr10:104155659..104155676,+!p4@NFKB2!0.19!0.93!NFKB2;;chr10:21962268..21962272,+!p6@MLLT10!0.19!0.93!MLLT10;;chr11:707063..707088,-!p4@DEAF1!0.19!0.93!DEAF1;;chr12:80083544..80083558,-!p13@PAWR!0.19!0.93!PAWR;;chr22:30163056..30163067,-!p3@ZMAT5!0.19!0.93!ZMAT5;;chr19:50431973..50431998,+!p5@ATF5!0.19!0.93!ATF5;;chr1:151032739..151032748,+!p6@MLLT11!0.19!0.93!MLLT11;;chr1:249153309..249153330,-!p4@ZNF692!0.19!0.93!ZNF692;;chr1:67390715..67390733,+!p7@MIER1!0.19!0.93!MIER1;;chr22:29196511..29196541,-!p1@XBP1!0.18!154.52!XBP1;;chr2:191878874..191878938,-!p1@STAT1!0.18!74.25!STAT1;;chr12:12764773..12764852,+!p1@CREBL2!0.18!34.34!CREBL2;;chr14:64971461..64971542,+!p1@ZBTB1!0.18!27.38!ZBTB1;;chr22:21356016..21356105,-!p1@THAP7!0.18!20.88!THAP7;;chr9:94186101..94186122,-!p1@NFIL3!0.18!18.56!NFIL3;;chr9:20622478..20622525,-!p1@MLLT3!0.18!10.21!MLLT3;;chr7:64023441..64023462,-!p1@ZNF680!0.18!10.21!ZNF680;;chr6:108880956..108881011,+!p1@FOXO3!0.18!8.35!FOXO3;;chr13:45151259..45151326,-!p2@TSC22D1!0.18!7.42!TSC22D1;;chr13:41635512..41635539,-!p2@ELF1!0.18!6.96!ELF1;;chr6:7107999..7108031,+!p2@RREB1!0.18!6.50!RREB1;;chr14:74226783..74226819,-!p4@C14orf43!0.18!6.03!C14orf43;;chr11:65687362..65687436,+!p3@DRAP1!0.18!5.57!DRAP1;;chr5:92918894..92918912,+!p2@NR2F1!0.18!3.71!NR2F1;;chr19:23870007..23870022,-!p2@ZNF675!0.18!3.71!ZNF675;;chr4:47916613..47916640,-!p3@NFXL1!0.18!3.25!NFXL1;;chr14:45722287..45722308,-!p2@MIS18BP1!0.18!2.78!MIS18BP1;;chr3:12329397..12329433,+!p2@PPARG!0.18!2.32!PPARG;;chr8:116681150..116681164,-!p5@TRPS1!0.18!1.86!TRPS1;;chr6:21594845..21594908,+!p6@SOX4!0.18!1.39!SOX4;;chr12:56575310..56575344,-!p3@SMARCC2!0.18!1.39!SMARCC2;;chr2:208030299..208030332,-!p6@KLF7!0.18!1.39!KLF7;;chr3:37216069..37216075,-!p4@LRRFIP2!0.18!0.93!LRRFIP2;;chr3:44626359..44626387,+!p4@ZNF197!0.18!0.93!ZNF197;;chr9:128510454..128510469,+!p3@PBX3!0.18!0.93!PBX3;;chr18:56530756..56530774,+!p6@ZNF532!0.18!0.93!ZNF532;;chr19:37407411..37407451,+!p3@ZNF568!0.18!0.93!ZNF568;;chr14:62213758..62213774,+!p8@HIF1A!0.18!0.93!HIF1A;;chr19:38183208..38183225,-!p1@ZNF781!0.18!0.93!ZNF781;;chr10:3827389..3827408,-!p1@KLF6!0.17!103.02!KLF6;;chr20:46130619..46130664,+!p1@NCOA3!0.17!35.73!NCOA3;;chr7:111846741..111846776,+!p1@ZNF277!0.17!26.91!ZNF277;;chr1:211432700..211432753,+!p1@RCOR3!0.17!24.13!RCOR3;;chr19:12721725..12721758,+!p1@ZNF791!0.17!22.74!ZNF791;;chr7:64254793..64254813,+!p1@ZNF138!0.17!14.85!ZNF138;;chr12:51477368..51477386,-!p1@CSRNP2!0.17!14.39!CSRNP2;;chr9:73028814..73028895,-!p1@KLF9!0.17!12.53!KLF9;;chr17:7387524..7387597,-!p1@ZBTB4!0.17!12.06!ZBTB4;;chr17:40897043..40897087,-!p1@EZH1!0.17!11.14!EZH1;;chr7:148892629..148892651,+!p2@ZNF282!0.17!7.42!ZNF282;;chr19:50169013..50169062,-!p2@IRF3!0.17!6.96!IRF3;;chr19:9434841..9434886,+!p1@ZNF559!0.17!6.03!ZNF559;;chr19:44507091..44507163,+!p1@ZNF230!0.17!5.10!ZNF230;;chr6:28220023..28220053,-!p1@ZKSCAN4!0.17!5.10!ZKSCAN4;;chr18:53257027..53257052,-!p3@TCF4!0.17!4.64!TCF4;;chr2:85197924..85197955,+!p3@KCMF1!0.17!4.18!KCMF1;;chr19:44439420..44439447,-!p1@ZNF45!0.17!4.18!ZNF45;;chr7:17338324..17338341,+!p3@AHR!0.17!3.71!AHR;;chr9:73029219..73029289,-!p2@KLF9!0.17!3.25!KLF9;;chr18:3451646..3451691,+!p3@TGIF1!0.17!2.78!TGIF1;;chr19:12035878..12035902,+!p2@ZNF700,p2@ZNF763!0.17!2.32!ZNF700;;chr13:74708372..74708409,-!p4@KLF12!0.17!2.32!KLF12;;chr14:64971438..64971450,+!p2@ZBTB1!0.17!2.32!ZBTB1;;chr20:25677443..25677464,-!p2@ZNF337!0.17!2.32!ZNF337;;chr20:3388579..3388619,-!p3@C20orf194!0.17!2.32!C20orf194;;chr22:42229210..42229229,+!p3@SREBF2!0.17!2.32!SREBF2;;chr4:121843844..121843904,-!p1@PRDM5!0.17!2.32!PRDM5;;chrX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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000134
|sample_tissue=bone marrow
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
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Line 66: Line 40:
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|rna_box=124
|rna_catalog_number=
|rna_concentration=0.14613
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=1.78
|rna_od260/280=2.12
|rna_position=H6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=124H6
|rna_weight_ug=5.11455
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=SOC-57-02-G
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.42000041704984e-212!GO:0005737;cytoplasm;2.36610303127134e-187!GO:0043226;organelle;9.10630088582958e-150!GO:0043229;intracellular organelle;2.3541937540576e-149!GO:0043231;intracellular membrane-bound organelle;1.22599000096794e-147!GO:0043227;membrane-bound organelle;2.42587180129694e-147!GO:0044444;cytoplasmic part;3.15566646748212e-138!GO:0044422;organelle part;1.20760119468933e-110!GO:0044446;intracellular organelle part;2.39518873469257e-109!GO:0032991;macromolecular complex;3.86288215108316e-73!GO:0005515;protein binding;3.86288215108316e-73!GO:0044238;primary metabolic process;7.27450398835019e-69!GO:0044237;cellular metabolic process;8.1167858327448e-69!GO:0030529;ribonucleoprotein complex;1.61183248275387e-65!GO:0043170;macromolecule metabolic process;3.26756942330417e-62!GO:0005739;mitochondrion;5.56099969173164e-53!GO:0043233;organelle lumen;1.90000139396417e-52!GO:0031974;membrane-enclosed lumen;1.90000139396417e-52!GO:0031090;organelle membrane;5.36986805815079e-52!GO:0003723;RNA binding;4.80027218554321e-51!GO:0019538;protein metabolic process;4.38261766319499e-49!GO:0044428;nuclear part;1.59437027206344e-48!GO:0044260;cellular macromolecule metabolic process;1.64216119845996e-44!GO:0044267;cellular protein metabolic process;1.23880807706056e-43!GO:0015031;protein transport;4.12284725946339e-43!GO:0033036;macromolecule localization;8.32352187452163e-43!GO:0006412;translation;1.33279068849066e-42!GO:0005634;nucleus;1.53804004040592e-42!GO:0005840;ribosome;1.15174162123748e-41!GO:0045184;establishment of protein localization;1.45061934533439e-40!GO:0008104;protein localization;4.63000509996968e-40!GO:0009058;biosynthetic process;7.4633457890332e-40!GO:0016043;cellular component organization and biogenesis;4.44541347022505e-39!GO:0005829;cytosol;8.02584577783038e-39!GO:0003735;structural constituent of ribosome;1.16176714678166e-37!GO:0043234;protein complex;1.72338431555853e-36!GO:0009059;macromolecule biosynthetic process;1.05872300583715e-35!GO:0044429;mitochondrial part;1.05089630957614e-34!GO:0044249;cellular biosynthetic process;2.71089657516177e-34!GO:0046907;intracellular transport;3.42227957204342e-34!GO:0031967;organelle envelope;9.64936616645432e-34!GO:0006396;RNA processing;1.15012617371378e-33!GO:0031975;envelope;2.09141101523558e-33!GO:0033279;ribosomal subunit;2.98969631889612e-33!GO:0016071;mRNA metabolic process;2.24498029997348e-29!GO:0043283;biopolymer metabolic process;2.67520739242041e-29!GO:0006886;intracellular protein transport;3.66850194841506e-29!GO:0031981;nuclear lumen;3.89332913183882e-29!GO:0008380;RNA splicing;2.16259751420228e-27!GO:0005783;endoplasmic reticulum;7.43725569621892e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.6447102674948e-26!GO:0010467;gene expression;2.52395716873831e-25!GO:0006397;mRNA processing;2.76306595917494e-25!GO:0012505;endomembrane system;1.12909808272704e-24!GO:0005740;mitochondrial envelope;1.62395003528394e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.72533875442926e-22!GO:0031966;mitochondrial membrane;3.16015803029049e-22!GO:0065003;macromolecular complex assembly;5.66913966363507e-22!GO:0051641;cellular localization;1.0926496393988e-21!GO:0051649;establishment of cellular localization;1.26494196920656e-21!GO:0006457;protein folding;2.04450982456157e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.58209475014733e-21!GO:0044445;cytosolic part;7.29958906327998e-21!GO:0019866;organelle inner membrane;7.7310829659552e-21!GO:0006996;organelle organization and biogenesis;1.42014709500404e-20!GO:0006119;oxidative phosphorylation;2.12420093803014e-20!GO:0005794;Golgi apparatus;2.97194946606539e-20!GO:0044432;endoplasmic reticulum part;5.44750624184482e-20!GO:0005743;mitochondrial inner membrane;1.98600594413691e-19!GO:0048770;pigment granule;2.18040711413286e-19!GO:0042470;melanosome;2.18040711413286e-19!GO:0022607;cellular component assembly;2.33698268555845e-19!GO:0016462;pyrophosphatase activity;4.77333557718199e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.53090742884534e-19!GO:0000166;nucleotide binding;6.53162169240906e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;7.26876799942791e-19!GO:0005681;spliceosome;7.26876799942791e-19!GO:0043228;non-membrane-bound organelle;7.26876799942791e-19!GO:0043232;intracellular non-membrane-bound organelle;7.26876799942791e-19!GO:0017111;nucleoside-triphosphatase activity;1.34504590956513e-18!GO:0005654;nucleoplasm;6.54632728080125e-18!GO:0015934;large ribosomal subunit;7.4966173514506e-18!GO:0044455;mitochondrial membrane part;2.95064057274911e-17!GO:0048193;Golgi vesicle transport;2.38828904865963e-16!GO:0015935;small ribosomal subunit;2.52732965774849e-16!GO:0022618;protein-RNA complex assembly;3.96201560734293e-16!GO:0051082;unfolded protein binding;1.15253366793549e-15!GO:0008134;transcription factor binding;3.4568478998062e-15!GO:0044265;cellular macromolecule catabolic process;3.91843766317769e-15!GO:0043285;biopolymer catabolic process;7.86774191738143e-15!GO:0005746;mitochondrial respiratory chain;1.16133149824499e-14!GO:0051186;cofactor metabolic process;1.39600425391566e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.67794380193166e-14!GO:0044451;nucleoplasm part;1.70809412187555e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.05041703817395e-14!GO:0044257;cellular protein catabolic process;2.76850718789677e-14!GO:0016874;ligase activity;2.91628220362825e-14!GO:0019941;modification-dependent protein catabolic process;3.32393410668681e-14!GO:0043632;modification-dependent macromolecule catabolic process;3.32393410668681e-14!GO:0009057;macromolecule catabolic process;4.09061995574818e-14!GO:0006511;ubiquitin-dependent protein catabolic process;5.14425150066133e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.08632363047383e-14!GO:0032553;ribonucleotide binding;6.08632363047383e-14!GO:0032555;purine ribonucleotide binding;6.08632363047383e-14!GO:0006605;protein targeting;6.14058197629062e-14!GO:0017076;purine nucleotide binding;6.69794750311525e-14!GO:0016192;vesicle-mediated transport;6.87823836555572e-14!GO:0006259;DNA metabolic process;7.94238563535064e-14!GO:0005789;endoplasmic reticulum membrane;8.65472232816367e-14!GO:0000502;proteasome complex (sensu Eukaryota);8.67422388064114e-14!GO:0006512;ubiquitin cycle;1.07071594658177e-13!GO:0008135;translation factor activity, nucleic acid binding;1.29575959762715e-13!GO:0031980;mitochondrial lumen;1.44682304078505e-13!GO:0005759;mitochondrial matrix;1.44682304078505e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.48606121976078e-13!GO:0030163;protein catabolic process;1.83205461831989e-13!GO:0044248;cellular catabolic process;3.34076257447306e-13!GO:0043412;biopolymer modification;3.93877129195415e-13!GO:0050136;NADH dehydrogenase (quinone) activity;4.14538241012228e-13!GO:0003954;NADH dehydrogenase activity;4.14538241012228e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.14538241012228e-13!GO:0005793;ER-Golgi intermediate compartment;5.70344172140316e-13!GO:0012501;programmed cell death;6.44858521412932e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.15010991952301e-12!GO:0006915;apoptosis;1.73219529834792e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.69727409115519e-12!GO:0048523;negative regulation of cellular process;5.80328441079262e-12!GO:0006464;protein modification process;6.25177943955292e-12!GO:0005730;nucleolus;7.59241531021532e-12!GO:0008219;cell death;1.35396086525842e-11!GO:0016265;death;1.35396086525842e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.29307477128614e-11!GO:0045271;respiratory chain complex I;2.29307477128614e-11!GO:0005747;mitochondrial respiratory chain complex I;2.29307477128614e-11!GO:0006732;coenzyme metabolic process;3.99181490317397e-11!GO:0042775;organelle ATP synthesis coupled electron transport;4.37685782573383e-11!GO:0042773;ATP synthesis coupled electron transport;4.37685782573383e-11!GO:0005524;ATP binding;5.43061716344643e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.75818476539503e-11!GO:0006413;translational initiation;6.92292156682445e-11!GO:0005635;nuclear envelope;7.10651714789723e-11!GO:0003743;translation initiation factor activity;8.72944214624754e-11!GO:0032559;adenyl ribonucleotide binding;1.12291035114726e-10!GO:0005761;mitochondrial ribosome;1.18010743254504e-10!GO:0000313;organellar ribosome;1.18010743254504e-10!GO:0005768;endosome;1.54200336656533e-10!GO:0030554;adenyl nucleotide binding;1.58609312010961e-10!GO:0006446;regulation of translational initiation;2.10552504664578e-10!GO:0009259;ribonucleotide metabolic process;2.38082782775961e-10!GO:0003676;nucleic acid binding;2.97461674173918e-10!GO:0048519;negative regulation of biological process;3.55451235259309e-10!GO:0006163;purine nucleotide metabolic process;4.10195935002525e-10!GO:0003712;transcription cofactor activity;4.76341107992015e-10!GO:0009150;purine ribonucleotide metabolic process;5.16910911453836e-10!GO:0031965;nuclear membrane;5.86946331299021e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.38831597198878e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;6.41663059126e-10!GO:0000375;RNA splicing, via transesterification reactions;6.41663059126e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.41663059126e-10!GO:0044431;Golgi apparatus part;1.19911718612018e-09!GO:0006164;purine nucleotide biosynthetic process;2.00973410815107e-09!GO:0043687;post-translational protein modification;2.13839960440637e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.4358608655496e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.75236259644289e-09!GO:0009260;ribonucleotide biosynthetic process;3.61713461580352e-09!GO:0006913;nucleocytoplasmic transport;3.67418682777967e-09!GO:0009055;electron carrier activity;3.7877919362541e-09!GO:0008565;protein transporter activity;3.83774305115665e-09!GO:0043069;negative regulation of programmed cell death;4.10680020745872e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.16449922207483e-09!GO:0009144;purine nucleoside triphosphate metabolic process;4.16449922207483e-09!GO:0009141;nucleoside triphosphate metabolic process;5.29056634690215e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.41958631484885e-09!GO:0016887;ATPase activity;6.277798034497e-09!GO:0051169;nuclear transport;6.28928807081372e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.72607426886738e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.46689649755232e-09!GO:0043066;negative regulation of apoptosis;1.17141985239896e-08!GO:0042623;ATPase activity, coupled;1.25382426634218e-08!GO:0015986;ATP synthesis coupled proton transport;1.25382426634218e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.25382426634218e-08!GO:0019829;cation-transporting ATPase activity;1.28116555997777e-08!GO:0003924;GTPase activity;1.37820099086391e-08!GO:0008639;small protein conjugating enzyme activity;1.46633421218296e-08!GO:0016604;nuclear body;1.8447302808773e-08!GO:0005788;endoplasmic reticulum lumen;1.86126029205079e-08!GO:0043067;regulation of programmed cell death;1.95056557749377e-08!GO:0016070;RNA metabolic process;2.13378409633146e-08!GO:0046034;ATP metabolic process;2.21342910354287e-08!GO:0044453;nuclear membrane part;2.26462607710716e-08!GO:0030120;vesicle coat;2.45813269766066e-08!GO:0030662;coated vesicle membrane;2.45813269766066e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.81974099496378e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.81974099496378e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.81974099496378e-08!GO:0042981;regulation of apoptosis;3.0240645555459e-08!GO:0004842;ubiquitin-protein ligase activity;3.04582043601663e-08!GO:0007049;cell cycle;3.43447840498092e-08!GO:0006916;anti-apoptosis;3.84990278405478e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.16133040670706e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.35394555515419e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.35394555515419e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.35394555515419e-08!GO:0009056;catabolic process;4.47002689244822e-08!GO:0006974;response to DNA damage stimulus;6.40688155037901e-08!GO:0019787;small conjugating protein ligase activity;6.50549376800378e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.13717162367079e-08!GO:0031988;membrane-bound vesicle;1.12842625759387e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.15910607508562e-07!GO:0005773;vacuole;1.24315268928888e-07!GO:0016491;oxidoreductase activity;1.31448879219504e-07!GO:0051246;regulation of protein metabolic process;1.39646248404854e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.57508784545807e-07!GO:0048475;coated membrane;1.59043063039494e-07!GO:0030117;membrane coat;1.59043063039494e-07!GO:0042254;ribosome biogenesis and assembly;1.95543476823788e-07!GO:0006754;ATP biosynthetic process;2.09003714831604e-07!GO:0006753;nucleoside phosphate metabolic process;2.09003714831604e-07!GO:0017038;protein import;2.35830125734617e-07!GO:0016607;nuclear speck;2.67514071566295e-07!GO:0016881;acid-amino acid ligase activity;2.75920678540138e-07!GO:0000139;Golgi membrane;2.77427070012939e-07!GO:0051188;cofactor biosynthetic process;2.89264213133614e-07!GO:0003714;transcription corepressor activity;2.90170677297513e-07!GO:0016787;hydrolase activity;3.99600514771237e-07!GO:0031252;leading edge;4.00152113610602e-07!GO:0031982;vesicle;4.54246094831401e-07!GO:0006366;transcription from RNA polymerase II promoter;5.16952423243028e-07!GO:0009117;nucleotide metabolic process;5.37808811803358e-07!GO:0009060;aerobic respiration;5.59093521121118e-07!GO:0031410;cytoplasmic vesicle;6.42300246186737e-07!GO:0044440;endosomal part;7.48286541172837e-07!GO:0010008;endosome membrane;7.48286541172837e-07!GO:0005770;late endosome;7.77316417462441e-07!GO:0050794;regulation of cellular process;7.87013618796762e-07!GO:0004386;helicase activity;8.37505632234284e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.52880888814145e-07!GO:0005798;Golgi-associated vesicle;8.93315677884654e-07!GO:0051789;response to protein stimulus;1.48727297912709e-06!GO:0006986;response to unfolded protein;1.48727297912709e-06!GO:0000323;lytic vacuole;2.11552332703926e-06!GO:0005764;lysosome;2.11552332703926e-06!GO:0045333;cellular respiration;2.64740171478629e-06!GO:0006399;tRNA metabolic process;3.03240939425466e-06!GO:0006461;protein complex assembly;3.23849623261739e-06!GO:0006281;DNA repair;3.72129703322805e-06!GO:0065002;intracellular protein transport across a membrane;3.7948362956305e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.82460762138208e-06!GO:0004812;aminoacyl-tRNA ligase activity;3.82460762138208e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.82460762138208e-06!GO:0043038;amino acid activation;4.32082710855865e-06!GO:0006418;tRNA aminoacylation for protein translation;4.32082710855865e-06!GO:0043039;tRNA aminoacylation;4.32082710855865e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.75710339680985e-06!GO:0005643;nuclear pore;4.75710339680985e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;4.89996760494003e-06!GO:0016564;transcription repressor activity;4.89996760494003e-06!GO:0008026;ATP-dependent helicase activity;5.2495077921297e-06!GO:0006752;group transfer coenzyme metabolic process;5.27905620516401e-06!GO:0000074;regulation of progression through cell cycle;5.33493011103845e-06!GO:0009719;response to endogenous stimulus;5.38791915656316e-06!GO:0051726;regulation of cell cycle;5.40982947403522e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.48996947146778e-06!GO:0006793;phosphorus metabolic process;6.01484641504015e-06!GO:0006796;phosphate metabolic process;6.01484641504015e-06!GO:0051187;cofactor catabolic process;7.84561610404608e-06!GO:0009108;coenzyme biosynthetic process;7.94345483985313e-06!GO:0031324;negative regulation of cellular metabolic process;8.47668920550333e-06!GO:0007005;mitochondrion organization and biogenesis;8.96252992959512e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.02390911651708e-05!GO:0008361;regulation of cell size;1.03808574124244e-05!GO:0006323;DNA packaging;1.13152381087474e-05!GO:0006099;tricarboxylic acid cycle;1.16617046381114e-05!GO:0046356;acetyl-CoA catabolic process;1.16617046381114e-05!GO:0045786;negative regulation of progression through cell cycle;1.21560843249997e-05!GO:0051170;nuclear import;1.21623851111483e-05!GO:0005525;GTP binding;1.48907567515262e-05!GO:0008654;phospholipid biosynthetic process;1.58095520874059e-05!GO:0005769;early endosome;1.65172385599287e-05!GO:0016049;cell growth;1.67191752479259e-05!GO:0032446;protein modification by small protein conjugation;1.98200850482249e-05!GO:0016853;isomerase activity;2.00019025581099e-05!GO:0016310;phosphorylation;2.14232877672354e-05!GO:0045259;proton-transporting ATP synthase complex;2.1457086704511e-05!GO:0006613;cotranslational protein targeting to membrane;2.14970362031724e-05!GO:0006606;protein import into nucleus;2.33249786232204e-05!GO:0030133;transport vesicle;2.33263025877214e-05!GO:0046930;pore complex;2.34655927450815e-05!GO:0006403;RNA localization;2.38708624685478e-05!GO:0016740;transferase activity;2.47778634816101e-05!GO:0009109;coenzyme catabolic process;2.55469404096274e-05!GO:0022402;cell cycle process;2.58801393361222e-05!GO:0016567;protein ubiquitination;2.74165297384966e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.98857796845771e-05!GO:0050657;nucleic acid transport;3.14077246492413e-05!GO:0051236;establishment of RNA localization;3.14077246492413e-05!GO:0050658;RNA transport;3.14077246492413e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.25668435186909e-05!GO:0001558;regulation of cell growth;3.65839580834002e-05!GO:0009892;negative regulation of metabolic process;3.76413797098986e-05!GO:0006084;acetyl-CoA metabolic process;3.78330870678596e-05!GO:0045454;cell redox homeostasis;4.36316662128774e-05!GO:0048522;positive regulation of cellular process;4.44884381766035e-05!GO:0004298;threonine endopeptidase activity;4.68848155883926e-05!GO:0031968;organelle outer membrane;4.87396048572281e-05!GO:0000245;spliceosome assembly;5.21561651769233e-05!GO:0030867;rough endoplasmic reticulum membrane;5.99514701226339e-05!GO:0043566;structure-specific DNA binding;6.04191632634553e-05!GO:0006091;generation of precursor metabolites and energy;6.24718090226891e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;7.18811899643548e-05!GO:0019867;outer membrane;7.41108218955301e-05!GO:0016563;transcription activator activity;7.78629814151021e-05!GO:0050789;regulation of biological process;9.48555220437416e-05!GO:0033116;ER-Golgi intermediate compartment membrane;9.57679695283341e-05!GO:0051276;chromosome organization and biogenesis;9.80031481123992e-05!GO:0003724;RNA helicase activity;9.82768078961477e-05!GO:0000151;ubiquitin ligase complex;0.000103813391511536!GO:0016859;cis-trans isomerase activity;0.000106136494151232!GO:0032561;guanyl ribonucleotide binding;0.000106276640701005!GO:0019001;guanyl nucleotide binding;0.000106276640701005!GO:0005905;coated pit;0.000108506231199163!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000113139052063083!GO:0015399;primary active transmembrane transporter activity;0.000113139052063083!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00011502082851934!GO:0005762;mitochondrial large ribosomal subunit;0.000130555577382174!GO:0000315;organellar large ribosomal subunit;0.000130555577382174!GO:0003697;single-stranded DNA binding;0.000136511343347101!GO:0007243;protein kinase cascade;0.000142446007190164!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000157433696385619!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000161785632325127!GO:0030029;actin filament-based process;0.000190507013571362!GO:0004576;oligosaccharyl transferase activity;0.000204100190190594!GO:0044262;cellular carbohydrate metabolic process;0.000221246850858802!GO:0008250;oligosaccharyl transferase complex;0.000230243246074635!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000243740947503662!GO:0006333;chromatin assembly or disassembly;0.000248643992499452!GO:0005667;transcription factor complex;0.000251649906252954!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000256698726184136!GO:0006364;rRNA processing;0.00026607968986525!GO:0016568;chromatin modification;0.000277048098772915!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000301033445426981!GO:0015630;microtubule cytoskeleton;0.000311042755493129!GO:0006612;protein targeting to membrane;0.000311390743799593!GO:0065004;protein-DNA complex assembly;0.000320249168481612!GO:0003713;transcription coactivator activity;0.000337895198479023!GO:0008610;lipid biosynthetic process;0.00034159395843278!GO:0006260;DNA replication;0.000356911457861396!GO:0016072;rRNA metabolic process;0.000358026791899962!GO:0005741;mitochondrial outer membrane;0.000395206182884234!GO:0005048;signal sequence binding;0.000401419387572457!GO:0007264;small GTPase mediated signal transduction;0.000410663019120767!GO:0043021;ribonucleoprotein binding;0.000434613841641382!GO:0005791;rough endoplasmic reticulum;0.000436970581869264!GO:0019899;enzyme binding;0.000454515176248887!GO:0005885;Arp2/3 protein complex;0.00046662657095924!GO:0009165;nucleotide biosynthetic process;0.000490672285868889!GO:0016126;sterol biosynthetic process;0.000496783518850799!GO:0001726;ruffle;0.000505627947670582!GO:0051427;hormone receptor binding;0.000559003511983887!GO:0006891;intra-Golgi vesicle-mediated transport;0.000559648247465838!GO:0016779;nucleotidyltransferase activity;0.000559648247465838!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000564657768244405!GO:0018196;peptidyl-asparagine modification;0.000574781238559198!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000574781238559198!GO:0005813;centrosome;0.000607205884940088!GO:0051028;mRNA transport;0.000612655864004414!GO:0022890;inorganic cation transmembrane transporter activity;0.000677526931749346!GO:0030663;COPI coated vesicle membrane;0.000677791501864127!GO:0030126;COPI vesicle coat;0.000677791501864127!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000822180301300669!GO:0015980;energy derivation by oxidation of organic compounds;0.000868144195328553!GO:0035257;nuclear hormone receptor binding;0.00100578416844419!GO:0051920;peroxiredoxin activity;0.00105494589123198!GO:0019843;rRNA binding;0.00115534578562051!GO:0008092;cytoskeletal protein binding;0.00115816008407566!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0012139539063893!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00122604844028555!GO:0030137;COPI-coated vesicle;0.00125124244029935!GO:0006818;hydrogen transport;0.00125371007208556!GO:0000785;chromatin;0.00129416057457964!GO:0016481;negative regulation of transcription;0.00132660080368876!GO:0008186;RNA-dependent ATPase activity;0.00136889735321664!GO:0008047;enzyme activator activity;0.00141363403221951!GO:0043492;ATPase activity, coupled to movement of substances;0.00143788384061377!GO:0046474;glycerophospholipid biosynthetic process;0.00143788384061377!GO:0031072;heat shock protein binding;0.00143950283703617!GO:0005815;microtubule organizing center;0.00156426450866507!GO:0006892;post-Golgi vesicle-mediated transport;0.00167116008599336!GO:0015992;proton transport;0.00167116008599336!GO:0016044;membrane organization and biogenesis;0.00168179299933662!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00169012103924289!GO:0030658;transport vesicle membrane;0.00172382045779564!GO:0040008;regulation of growth;0.00177520639039348!GO:0043623;cellular protein complex assembly;0.00178099913468358!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00188558892980021!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00188558892980021!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00188558892980021!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00196191795143591!GO:0048518;positive regulation of biological process;0.00196743738153029!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00198850922832823!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00198850922832823!GO:0007033;vacuole organization and biogenesis;0.00201350426956944!GO:0007010;cytoskeleton organization and biogenesis;0.00205152833947333!GO:0030132;clathrin coat of coated pit;0.00211815488795856!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00212901357631019!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00216631099262269!GO:0030027;lamellipodium;0.00218159208044137!GO:0005694;chromosome;0.00226530328299871!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00228432577999448!GO:0048468;cell development;0.00238550029002913!GO:0006950;response to stress;0.00244429739951757!GO:0065007;biological regulation;0.00254199694154712!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00256610180339943!GO:0016197;endosome transport;0.00256610180339943!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00271029002596667!GO:0007040;lysosome organization and biogenesis;0.00272390669024864!GO:0045045;secretory pathway;0.00275039406049947!GO:0006695;cholesterol biosynthetic process;0.00293789476485567!GO:0000314;organellar small ribosomal subunit;0.00319410358662873!GO:0005763;mitochondrial small ribosomal subunit;0.00319410358662873!GO:0048471;perinuclear region of cytoplasm;0.00340904134099705!GO:0007050;cell cycle arrest;0.00350333411397126!GO:0004004;ATP-dependent RNA helicase activity;0.00354258512744115!GO:0004177;aminopeptidase activity;0.0035908738109612!GO:0048500;signal recognition particle;0.0037219611474482!GO:0031418;L-ascorbic acid binding;0.00377777738444902!GO:0006334;nucleosome assembly;0.00380911384315768!GO:0065009;regulation of a molecular function;0.00387783935003874!GO:0009967;positive regulation of signal transduction;0.00412808088040564!GO:0031543;peptidyl-proline dioxygenase activity;0.00414931726931191!GO:0030127;COPII vesicle coat;0.00417931800265675!GO:0012507;ER to Golgi transport vesicle membrane;0.00417931800265675!GO:0030134;ER to Golgi transport vesicle;0.0041876848915528!GO:0000278;mitotic cell cycle;0.00440412634947826!GO:0030176;integral to endoplasmic reticulum membrane;0.00443421082264437!GO:0051168;nuclear export;0.00448915587145728!GO:0030118;clathrin coat;0.00450095985109!GO:0030659;cytoplasmic vesicle membrane;0.00455713208125967!GO:0043681;protein import into mitochondrion;0.0045726180263749!GO:0051252;regulation of RNA metabolic process;0.00474434865922206!GO:0030660;Golgi-associated vesicle membrane;0.00484759183598381!GO:0043284;biopolymer biosynthetic process;0.0048723196820816!GO:0044427;chromosomal part;0.00490488187839401!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00525712771054191!GO:0046467;membrane lipid biosynthetic process;0.00525832918989717!GO:0008632;apoptotic program;0.00570058556349621!GO:0006509;membrane protein ectodomain proteolysis;0.00585857570994944!GO:0033619;membrane protein proteolysis;0.00585857570994944!GO:0005774;vacuolar membrane;0.00585857570994944!GO:0006650;glycerophospholipid metabolic process;0.00597968164283921!GO:0017166;vinculin binding;0.00629640719732657!GO:0031497;chromatin assembly;0.00654110465423171!GO:0003690;double-stranded DNA binding;0.00693022365621053!GO:0048487;beta-tubulin binding;0.00697144997360447!GO:0051087;chaperone binding;0.00700998968421609!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00707453138973648!GO:0006740;NADPH regeneration;0.00709128596279573!GO:0006098;pentose-phosphate shunt;0.00709128596279573!GO:0006414;translational elongation;0.00711271802374317!GO:0003899;DNA-directed RNA polymerase activity;0.00721919901230915!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00725226480840263!GO:0045047;protein targeting to ER;0.00725226480840263!GO:0006626;protein targeting to mitochondrion;0.00733731504040441!GO:0046483;heterocycle metabolic process;0.0073738380384108!GO:0042802;identical protein binding;0.00740501905509811!GO:0006979;response to oxidative stress;0.00752815454000517!GO:0019798;procollagen-proline dioxygenase activity;0.00755124113800208!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00759871750032841!GO:0015631;tubulin binding;0.00798218308304813!GO:0003729;mRNA binding;0.00806205101947137!GO:0045792;negative regulation of cell size;0.00821603434029699!GO:0031901;early endosome membrane;0.00877010463333869!GO:0031902;late endosome membrane;0.00900636389336756!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00901168603169711!GO:0005096;GTPase activator activity;0.00903400768724406!GO:0003746;translation elongation factor activity;0.00905799135687863!GO:0032940;secretion by cell;0.00948299160197416!GO:0046519;sphingoid metabolic process;0.00948299160197416!GO:0033673;negative regulation of kinase activity;0.00951447147098225!GO:0006469;negative regulation of protein kinase activity;0.00951447147098225!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00966963819946759!GO:0035258;steroid hormone receptor binding;0.00977477879729652!GO:0008139;nuclear localization sequence binding;0.00977477879729652!GO:0008312;7S RNA binding;0.00981334614844238!GO:0030308;negative regulation of cell growth;0.00989688891227542!GO:0006839;mitochondrial transport;0.0100866772505089!GO:0051348;negative regulation of transferase activity;0.0103069047769931!GO:0044433;cytoplasmic vesicle part;0.0105296967155533!GO:0006383;transcription from RNA polymerase III promoter;0.010969729230757!GO:0046489;phosphoinositide biosynthetic process;0.0112204049077122!GO:0006417;regulation of translation;0.0119187383711961!GO:0003711;transcription elongation regulator activity;0.0121234774873166!GO:0007006;mitochondrial membrane organization and biogenesis;0.0123785731805398!GO:0006402;mRNA catabolic process;0.0126143594014323!GO:0051540;metal cluster binding;0.0128372489016969!GO:0051536;iron-sulfur cluster binding;0.0128372489016969!GO:0030125;clathrin vesicle coat;0.0131698925418743!GO:0030665;clathrin coated vesicle membrane;0.0131698925418743!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0133208597964476!GO:0012506;vesicle membrane;0.0133451017604743!GO:0006354;RNA elongation;0.0133682258305924!GO:0051287;NAD binding;0.0134035316644984!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0134194864814945!GO:0006672;ceramide metabolic process;0.013463605955282!GO:0016860;intramolecular oxidoreductase activity;0.0135069800764296!GO:0044437;vacuolar part;0.0135712898039743!GO:0007034;vacuolar transport;0.0139152198815626!GO:0016363;nuclear matrix;0.0144198170304732!GO:0004674;protein serine/threonine kinase activity;0.0152984374076015!GO:0016272;prefoldin complex;0.0153679764751773!GO:0030119;AP-type membrane coat adaptor complex;0.0153814125185826!GO:0006007;glucose catabolic process;0.0157812719748227!GO:0005862;muscle thin filament tropomyosin;0.0158764734729913!GO:0007030;Golgi organization and biogenesis;0.0159777474251448!GO:0030041;actin filament polymerization;0.0160657577013264!GO:0045941;positive regulation of transcription;0.0160691385911877!GO:0004228;gelatinase A activity;0.0161366928516792!GO:0001955;blood vessel maturation;0.0161366928516792!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.016760731543404!GO:0015002;heme-copper terminal oxidase activity;0.016760731543404!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.016760731543404!GO:0004129;cytochrome-c oxidase activity;0.016760731543404!GO:0051128;regulation of cellular component organization and biogenesis;0.0172335992834428!GO:0045892;negative regulation of transcription, DNA-dependent;0.0175617290280667!GO:0051272;positive regulation of cell motility;0.0176371280698607!GO:0040017;positive regulation of locomotion;0.0176371280698607!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0183302440947816!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0183302440947816!GO:0003756;protein disulfide isomerase activity;0.0185230168244565!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0185230168244565!GO:0006595;polyamine metabolic process;0.0197518457880957!GO:0051270;regulation of cell motility;0.0199515789149261!GO:0006607;NLS-bearing substrate import into nucleus;0.0200820579867656!GO:0005869;dynactin complex;0.0202981497307046!GO:0050811;GABA receptor binding;0.0205043470696233!GO:0043022;ribosome binding;0.0207862816151073!GO:0006497;protein amino acid lipidation;0.0209467856897033!GO:0030503;regulation of cell redox homeostasis;0.0213876164103669!GO:0043488;regulation of mRNA stability;0.0215340118422881!GO:0043487;regulation of RNA stability;0.0215340118422881!GO:0031529;ruffle organization and biogenesis;0.0215340118422881!GO:0000339;RNA cap binding;0.0215340118422881!GO:0022408;negative regulation of cell-cell adhesion;0.0221581730220559!GO:0005581;collagen;0.0222659816731885!GO:0045893;positive regulation of transcription, DNA-dependent;0.0225719184111137!GO:0000059;protein import into nucleus, docking;0.0225719184111137!GO:0001516;prostaglandin biosynthetic process;0.0225719184111137!GO:0046457;prostanoid biosynthetic process;0.0225719184111137!GO:0006778;porphyrin metabolic process;0.0226771124653985!GO:0033013;tetrapyrrole metabolic process;0.0226771124653985!GO:0000096;sulfur amino acid metabolic process;0.0228159856146653!GO:0005765;lysosomal membrane;0.0230287674392124!GO:0001666;response to hypoxia;0.0234181558680123!GO:0031625;ubiquitin protein ligase binding;0.0234181558680123!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0238110842567176!GO:0000209;protein polyubiquitination;0.0242034731533137!GO:0019318;hexose metabolic process;0.0242503414850989!GO:0006739;NADP metabolic process;0.0248958043627632!GO:0035035;histone acetyltransferase binding;0.0250419863656135!GO:0008243;plasminogen activator activity;0.0262037490805347!GO:0051101;regulation of DNA binding;0.0263750035027595!GO:0030131;clathrin adaptor complex;0.0263750035027595!GO:0005832;chaperonin-containing T-complex;0.0263750035027595!GO:0001872;zymosan binding;0.0265709692982688!GO:0001878;response to yeast;0.0265709692982688!GO:0051539;4 iron, 4 sulfur cluster binding;0.026633942081072!GO:0000049;tRNA binding;0.0268487510068507!GO:0030433;ER-associated protein catabolic process;0.0268715179308321!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0268715179308321!GO:0019752;carboxylic acid metabolic process;0.0272545315779152!GO:0008234;cysteine-type peptidase activity;0.027267806685673!GO:0033559;unsaturated fatty acid metabolic process;0.0275354703234291!GO:0006636;unsaturated fatty acid biosynthetic process;0.0275354703234291!GO:0001952;regulation of cell-matrix adhesion;0.0276307694328688!GO:0004287;prolyl oligopeptidase activity;0.0279641577798444!GO:0050662;coenzyme binding;0.0281101488246078!GO:0030032;lamellipodium biogenesis;0.028149204628132!GO:0003684;damaged DNA binding;0.0284870825766828!GO:0005637;nuclear inner membrane;0.0293860228066231!GO:0005996;monosaccharide metabolic process;0.0295350243463164!GO:0009889;regulation of biosynthetic process;0.0295595758844018!GO:0031326;regulation of cellular biosynthetic process;0.0295595758844018!GO:0006082;organic acid metabolic process;0.0298634591290482!GO:0045926;negative regulation of growth;0.0298949754560908!GO:0005684;U2-dependent spliceosome;0.030072795286211!GO:0008147;structural constituent of bone;0.0305151196683624!GO:0006769;nicotinamide metabolic process;0.0306416242379323!GO:0003779;actin binding;0.0306416242379323!GO:0031124;mRNA 3'-end processing;0.0314003201982873!GO:0030384;phosphoinositide metabolic process;0.0320083449643207!GO:0001953;negative regulation of cell-matrix adhesion;0.0320221394764912!GO:0030521;androgen receptor signaling pathway;0.0320221394764912!GO:0022406;membrane docking;0.0323473671613374!GO:0048278;vesicle docking;0.0323473671613374!GO:0005801;cis-Golgi network;0.0325538679825876!GO:0016125;sterol metabolic process;0.0329267342885689!GO:0006790;sulfur metabolic process;0.0329600235247176!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0331486575369285!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0331486575369285!GO:0008154;actin polymerization and/or depolymerization;0.033712013672488!GO:0008180;signalosome;0.0337261586388869!GO:0006611;protein export from nucleus;0.0342946491972164!GO:0006289;nucleotide-excision repair;0.0344110594864697!GO:0009112;nucleobase metabolic process;0.0347802974369912!GO:0006984;ER-nuclear signaling pathway;0.0351750512088794!GO:0030140;trans-Golgi network transport vesicle;0.0360597469554404!GO:0006518;peptide metabolic process;0.0360597469554404!GO:0006767;water-soluble vitamin metabolic process;0.0360597469554404!GO:0042168;heme metabolic process;0.0364908669575315!GO:0030984;kininogen binding;0.0365648264074684!GO:0004213;cathepsin B activity;0.0365648264074684!GO:0015248;sterol transporter activity;0.0368473602605428!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0368958747068642!GO:0030833;regulation of actin filament polymerization;0.036917748826693!GO:0051329;interphase of mitotic cell cycle;0.0369990873053113!GO:0006066;alcohol metabolic process;0.0370070836051823!GO:0007041;lysosomal transport;0.0389454534896257!GO:0042158;lipoprotein biosynthetic process;0.0394256382192251!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0396504106587264!GO:0030145;manganese ion binding;0.0398096137437445!GO:0043433;negative regulation of transcription factor activity;0.0406984155668321!GO:0043407;negative regulation of MAP kinase activity;0.0408367993889011!GO:0016584;nucleosome positioning;0.0409850353445562!GO:0009116;nucleoside metabolic process;0.0410619686374856!GO:0030508;thiol-disulfide exchange intermediate activity;0.0410619686374856!GO:0051336;regulation of hydrolase activity;0.0410831841017712!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0412067916383343!GO:0007021;tubulin folding;0.0416297428144999!GO:0006118;electron transport;0.0421508153770814!GO:0030913;paranodal junction assembly;0.0428393454817356!GO:0032288;myelin formation;0.0428393454817356!GO:0006458;'de novo' protein folding;0.0428393454817356!GO:0051084;'de novo' posttranslational protein folding;0.0428393454817356!GO:0040011;locomotion;0.0434816786431052!GO:0030880;RNA polymerase complex;0.0438105606277722!GO:0043065;positive regulation of apoptosis;0.0442535363793568!GO:0019222;regulation of metabolic process;0.0445778110751976!GO:0006904;vesicle docking during exocytosis;0.0446907838736379!GO:0006401;RNA catabolic process;0.0453459803660395!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0453459803660395!GO:0005099;Ras GTPase activator activity;0.0455077054084299!GO:0006643;membrane lipid metabolic process;0.0458599271679855!GO:0008022;protein C-terminus binding;0.0461641110936577!GO:0006897;endocytosis;0.0462064710137733!GO:0010324;membrane invagination;0.0462064710137733!GO:0046426;negative regulation of JAK-STAT cascade;0.0462064710137733!GO:0000287;magnesium ion binding;0.0463866379009081!GO:0008320;protein transmembrane transporter activity;0.0464305490005898!GO:0005520;insulin-like growth factor binding;0.0466047829345986!GO:0007242;intracellular signaling cascade;0.0467035446330523!GO:0040012;regulation of locomotion;0.0467035446330523!GO:0043068;positive regulation of programmed cell death;0.0467035446330523!GO:0044255;cellular lipid metabolic process;0.0470858764315261!GO:0050681;androgen receptor binding;0.0471577721385925!GO:0045334;clathrin-coated endocytic vesicle;0.0483269542579058!GO:0030911;TPR domain binding;0.049380496446491!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0494849269594463!GO:0010257;NADH dehydrogenase complex assembly;0.0494849269594463!GO:0033108;mitochondrial respiratory chain complex assembly;0.0494849269594463!GO:0051301;cell division;0.0497903059375421!GO:0016301;kinase activity;0.0497903059375421
|sample_id=11842
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=bone marrow
|top_motifs=PAX1,9:1.68678957354;PPARG:1.47599849058;HIF1A:1.4565334963;ALX4:1.44660158498;GZF1:1.21052328684;RXR{A,B,G}:1.11769454398;TAL1_TCF{3,4,12}:1.10977220969;ZNF238:1.03449498218;UFEwm:1.00705819997;ZBTB6:0.962033212506;HSF1,2:0.961999382956;ATF6:0.94073670851;NFE2L1:0.936721720626;SRF:0.910583350706;bHLH_family:0.863635600146;TLX2:0.860571698448;ESR1:0.840287113505;PAX8:0.838569597046;NFATC1..3:0.833105186468;TEAD1:0.830625380704;RXRA_VDR{dimer}:0.79600841751;TLX1..3_NFIC{dimer}:0.79129651063;LHX3,4:0.790481180178;HMX1:0.770202575932;ALX1:0.713559365663;AHR_ARNT_ARNT2:0.686315535695;TFAP4:0.684683158551;HOX{A4,D4}:0.680927118079;HLF:0.660625878919;POU3F1..4:0.65744411928;GTF2A1,2:0.635058090863;PAX4:0.607328107601;MAFB:0.589040431058;MYFfamily:0.580756747209;HMGA1,2:0.574722552574;PRDM1:0.550375306963;NR3C1:0.531049672041;HOX{A5,B5}:0.505583874018;EVI1:0.495367883888;ONECUT1,2:0.492460249167;NHLH1,2:0.490740984774;ZIC1..3:0.477447492166;TP53:0.473655144751;SMAD1..7,9:0.473245519476;BACH2:0.450936554477;FOS_FOS{B,L1}_JUN{B,D}:0.45071297458;NFE2L2:0.441308027216;TFCP2:0.418002603898;MYBL2:0.401455421928;GLI1..3:0.39445327537;EN1,2:0.389274614868;AR:0.368145635924;MTE{core}:0.363366740365;HES1:0.338365026135;NANOG{mouse}:0.329323266126;GTF2I:0.309371058981;FOSL2:0.294514690969;EBF1:0.289400099827;TBP:0.281999011565;RFX1:0.277335476684;ZBTB16:0.272342644368;PITX1..3:0.266806662415;NFIX:0.262177931149;NR6A1:0.239529332607;NKX2-2,8:0.229130895674;TFAP2{A,C}:0.228306250891;SREBF1,2:0.226551658002;HBP1_HMGB_SSRP1_UBTF:0.226113275938;STAT5{A,B}:0.197862681956;CDX1,2,4:0.188358681015;XCPE1{core}:0.188171494256;FOXD3:0.180104171172;MEF2{A,B,C,D}:0.178561594813;IKZF1:0.169886508866;TFAP2B:0.162946296124;HNF1A:0.153284868502;GFI1B:0.130492049508;BPTF:0.130079403087;NKX3-1:0.12627822775;NFE2:0.121396425834;MZF1:0.108887985175;GATA4:0.101377702035;ZFP161:0.0933406626211;SPZ1:0.0895203250322;NKX3-2:0.0875486052762;PAX6:0.0754011462998;PATZ1:0.0516288958544;EGR1..3:0.0471038090165;ZNF384:0.0295483721703;CDC5L:0.0206229248267;RUNX1..3:0.0122095616734;KLF4:0.0114813915066;XBP1:0.011403834783;PAX3,7:0.00958564553183;NKX2-1,4:-0.000548436578107;SP1:-0.00407609065248;CEBPA,B_DDIT3:-0.02241768133;PAX2:-0.0520218958231;LEF1_TCF7_TCF7L1,2:-0.0785684911797;HIC1:-0.0844639326467;IRF1,2:-0.0865937650472;FOX{I1,J2}:-0.0892399956154;ESRRA:-0.0892428257849;TEF:-0.0909333207085;MED-1{core}:-0.0932662552968;FOXL1:-0.103620224397;JUN:-0.104822881302;SOX17:-0.116849423399;MAZ:-0.129883606975;SOX2:-0.139027141896;ZNF423:-0.139851479002;ATF2:-0.148126693335;TBX4,5:-0.166496902908;RREB1:-0.167887827138;ATF5_CREB3:-0.181774979136;CREB1:-0.185733192842;NFIL3:-0.188343650332;NFKB1_REL_RELA:-0.191373805136;ADNP_IRX_SIX_ZHX:-0.192492488839;MYOD1:-0.19732750821;FOXN1:-0.204466929131;ZNF148:-0.235600306696;POU6F1:-0.24369078754;SOX5:-0.246371182222;REST:-0.249545744809;HNF4A_NR2F1,2:-0.271206379337;NKX6-1,2:-0.27836940412;STAT2,4,6:-0.283183239351;AIRE:-0.292324618265;FOX{D1,D2}:-0.298722633757;EP300:-0.327124884202;NR1H4:-0.337622698064;GATA6:-0.340730836638;ZNF143:-0.342972071323;TFDP1:-0.357778172709;ATF4:-0.358102462772;DBP:-0.359980031691;IRF7:-0.394869480425;TOPORS:-0.398649829342;HAND1,2:-0.410122822637;NRF1:-0.4118212582;NANOG:-0.431634721794;STAT1,3:-0.435001833591;ARID5B:-0.439315352512;CRX:-0.448345703032;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.457904280892;POU1F1:-0.460775062124;PBX1:-0.465133334936;ETS1,2:-0.479786014168;FOXP1:-0.485981480178;POU5F1:-0.486248067904;MTF1:-0.505852362002;FOXM1:-0.516733588987;RFX2..5_RFXANK_RFXAP:-0.527726015862;DMAP1_NCOR{1,2}_SMARC:-0.549162887608;POU2F1..3:-0.560235179024;FOXQ1:-0.564063435107;PAX5:-0.582443398516;LMO2:-0.596551204956;ZEB1:-0.59675387572;ELF1,2,4:-0.602742891174;SPI1:-0.604318394503;GCM1,2:-0.607091484568;ELK1,4_GABP{A,B1}:-0.619285927192;SPIB:-0.625549333231;MYB:-0.646606883516;HOX{A6,A7,B6,B7}:-0.658693887255;E2F1..5:-0.662174466897;YY1:-0.667832374112;OCT4_SOX2{dimer}:-0.677240450713;PRRX1,2:-0.679389334712;HOXA9_MEIS1:-0.681448558659;SNAI1..3:-0.686963950297;IKZF2:-0.69192583375;GFI1:-0.694378863861;TGIF1:-0.70555483138;FOXP3:-0.718802998349;FOX{F1,F2,J1}:-0.73287662825;RORA:-0.776240641474;CUX2:-0.786416937105;VSX1,2:-0.809885038082;FOXO1,3,4:-0.919626742525;BREu{core}:-0.921535721511;NFY{A,B,C}:-0.934887321879;FOXA2:-0.938418514338;T:-0.971155305408;SOX{8,9,10}:-0.998733246924;NKX2-3_NKX2-5:-1.02605130856;RBPJ:-1.1276142834;NR5A1,2:-1.50172366537;PDX1:-1.63938776078;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.68663455915
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11842-124H6;search_select_hide=table117:FF:11842-124H6
}}
}}

Latest revision as of 18:23, 4 June 2020

Name:mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02-G)
Species:Human (Homo sapiens)
Library ID:CNhs13507
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone marrow
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005622
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13507 CAGE DRX008566 DRR009438
Accession ID Hg19

Library idBAMCTSS
CNhs13507 DRZ000863 DRZ002248
Accession ID Hg38

Library idBAMCTSS
CNhs13507 DRZ012213 DRZ013598
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0466
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.226
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.345
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0274
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.00968
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.456
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0458
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0703
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.545
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.678
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.285
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.537
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.349
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.131
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.166
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.166
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.456
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic1.012
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.379
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.817
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13507

Jaspar motifP-value
MA0002.20.903
MA0003.10.635
MA0004.10.57
MA0006.10.664
MA0007.10.137
MA0009.10.815
MA0014.10.706
MA0017.10.407
MA0018.24.51159e-4
MA0019.10.784
MA0024.12.2615e-6
MA0025.10.00904
MA0027.10.706
MA0028.12.19344e-5
MA0029.10.301
MA0030.10.276
MA0031.10.512
MA0035.20.0568
MA0038.12.67484e-4
MA0039.20.00441
MA0040.10.784
MA0041.10.45
MA0042.10.961
MA0043.10.00101
MA0046.10.258
MA0047.20.308
MA0048.10.747
MA0050.10.0251
MA0051.10.171
MA0052.10.478
MA0055.10.301
MA0057.10.934
MA0058.10.168
MA0059.10.574
MA0060.14.59898e-12
MA0061.10.545
MA0062.21.19001e-13
MA0065.20.0895
MA0066.10.808
MA0067.10.355
MA0068.10.494
MA0069.10.082
MA0070.10.835
MA0071.10.554
MA0072.10.294
MA0073.10.197
MA0074.10.48
MA0076.12.87759e-8
MA0077.10.906
MA0078.10.682
MA0079.20.0805
MA0080.24.53779e-7
MA0081.10.00171
MA0083.10.00324
MA0084.10.196
MA0087.10.436
MA0088.10.59
MA0090.13.29974e-5
MA0091.10.487
MA0092.10.532
MA0093.10.621
MA0099.21.21137e-9
MA0100.10.435
MA0101.10.216
MA0102.20.595
MA0103.10.0157
MA0104.20.116
MA0105.10.683
MA0106.10.0936
MA0107.10.163
MA0108.20.0107
MA0111.10.36
MA0112.20.051
MA0113.10.286
MA0114.10.0742
MA0115.10.00908
MA0116.10.602
MA0117.10.727
MA0119.10.0462
MA0122.10.14
MA0124.10.428
MA0125.10.0564
MA0131.10.216
MA0135.10.484
MA0136.18.69594e-10
MA0137.20.13
MA0138.20.745
MA0139.10.618
MA0140.10.825
MA0141.10.254
MA0142.10.0776
MA0143.10.438
MA0144.10.394
MA0145.10.709
MA0146.10.498
MA0147.10.225
MA0148.10.179
MA0149.10.312
MA0150.10.0981
MA0152.10.0605
MA0153.10.876
MA0154.10.716
MA0155.10.118
MA0156.12.79347e-7
MA0157.10.427
MA0159.10.541
MA0160.10.3
MA0162.10.0427
MA0163.10.408
MA0164.10.444
MA0258.10.516
MA0259.10.277



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13507

Novel motifP-value
10.862
100.533
1000.315
1010.0954
1020.147
1030.917
1040.99
1050.178
1060.0677
1070.159
1080.484
1090.989
110.787
1100.35
1110.35
1120.266
1130.0402
1140.181
1150.194
1160.343
1170.635
1180.638
1190.318
120.225
1200.532
1210.894
1220.0304
1230.0621
1240.565
1250.356
1260.598
1270.162
1280.251
1290.764
130.82
1300.783
1310.0227
1320.969
1330.483
1340.317
1350.298
1360.292
1370.295
1380.697
1390.144
140.278
1400.298
1410.976
1420.378
1430.0605
1440.256
1450.576
1460.569
1470.0723
1480.64
1490.0308
150.291
1500.33
1510.269
1520.067
1530.711
1540.906
1557.78399e-4
1560.487
1570.693
1580.177
1590.518
160.0817
1600.244
1610.561
1620.422
1630.0573
1640.0441
1650.882
1660.0664
1670.719
1680.493
1690.267
170.257
180.0683
190.133
20.445
200.165
210.165
220.63
230.00639
240.853
250.11
260.555
270.706
280.361
290.724
30.503
300.576
310.689
321.17313e-4
330.79
340.87
350.438
360.272
370.088
380.947
390.325
40.731
400.521
410.558
420.189
430.171
440.777
450.961
460.486
470.359
480.851
490.86
50.221
500.665
510.974
520.697
530.686
540.533
550.116
560.841
570.658
580.138
590.738
60.405
600.495
610.899
620.59
630.253
640.692
650.383
660.0317
670.257
680.677
690.913
70.0901
700.946
710.842
720.861
730.0857
740.0491
750.933
760.618
770.168
780.556
792.4936e-4
80.316
800.664
810.65
820.576
830.841
840.588
857.25998e-4
860.167
870.73
880.693
890.392
90.253
900.0624
910.244
920.0412
930.767
940.368
950.776
960.99
970.108
980.331
990.0382



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13507


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002118 (right ovary)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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