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{{f5samples
{{f5samples
|id=FF:11899-125E9
|DRA_sample_Accession=CAGE@SAMD00005404
|name=Hep-2 cells mock treated, biol_rep2
|accession_numbers=CAGE;DRX007783;DRR008655;DRZ000080;DRZ001465;DRZ011430;DRZ012815
|sample_id=11899
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001737,UBERON:0000064,UBERON:0004119,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000072,UBERON:0010317,UBERON:0000065,UBERON:0001004,UBERON:0001557
|rna_tube_id=125E9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
|rna_box=125
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305
|rna_position=E9
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0000343,FF:0000350,FF:0104978,FF:0100297,FF:0101120,FF:0011132
|sample_cell_lot=
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=3b
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr6:10415276..10415341,-!p2@TFAP2A!1.72!61.87!TFAP2A;;chr1:201979743..201979762,+!p1@ELF3!1.54!33.72!ELF3;;chr2:238592039..238592054,+!p4@LRRFIP1!1.52!31.86!LRRFIP1;;chr5:134369905..134369972,-!p1@PITX1!1.50!46.87!PITX1;;chr6:10415484..10415508,-!p3@TFAP2A!1.49!30.18!TFAP2A;;chr6:126240380..126240430,+!p2@NCOA7!1.48!73.00!NCOA7;;chr6:10412600..10412637,-!p1@TFAP2A!1.44!43.66!TFAP2A;;chr6:1312325..1312340,+!p1@FOXQ1!1.42!40.63!FOXQ1;;chr5:170736243..170736279,+!p1@TLX3!1.28!18.21!TLX3;;chr5:134369879..134369898,-!p2@PITX1!1.28!18.04!PITX1;;chr6:126240442..126240459,+!p4@NCOA7!1.26!22.08!NCOA7;;chr1:201979703..201979721,+!p2@ELF3!1.24!16.18!ELF3;;chr22:19748231..19748317,+!p1@TBX1!1.19!14.67!TBX1;;chr12:54380036..54380091,+!p4@HOXC10!1.16!13.32!HOXC10;;chr6:126240463..126240489,+!p6@NCOA7!1.13!13.99!NCOA7;;chr17:46682321..46682362,-!p1@HOXB6!1.12!12.14!HOXB6;;chr6:126240356..126240379,+!p7@NCOA7!1.11!14.67!NCOA7;;chr6:1389789..1389821,+!p1@FOXF2!1.10!16.02!FOXF2;;chr18:55102598..55102623,+!p1@ONECUT2!1.09!11.30!ONECUT2;;chr7:101917447..101917479,+!p4@CUX1!1.08!10.96!CUX1;;chr18:55102628..55102646,+!p2@ONECUT2!1.07!10.62!ONECUT2;;chrX:131624056..131624069,-!p2@MBNL3!1.06!14.50!MBNL3;;chr20:6748325..6748352,+!p1@BMP2!1.05!14.84!BMP2;;chr12:54380404..54380433,+!p3@HOXC10!1.02!9.44!HOXC10;;chr9:100615499..100615519,+!p1@FOXE1!1.00!9.10!FOXE1;;chr3:69915385..69915438,+!p3@MITF!1.00!9.10!MITF;;chr12:54378923..54378966,+!p1@HOXC10!0.99!8.77!HOXC10;;chr7:27224842..27224872,-!p1@HOXA11!0.98!8.60!HOXA11;;chr1:44513995..44514031,+!p1@KLF17!0.97!8.43!KLF17;;chr13:73633131..73633149,+!p1@KLF5!0.96!90.02!KLF5;;chr6:10412392..10412409,-!p4@TFAP2A!0.96!9.44!TFAP2A;;chr6:10412576..10412599,-!p5@TFAP2A!0.93!7.59!TFAP2A;;chr17:46687959..46688007,-!p2@HOXB7!0.91!9.95!HOXB7;;chr12:54379029..54379057,+!p2@HOXC10!0.91!7.08!HOXC10;;chr11:34663913..34663945,+!p6@EHF!0.90!6.91!EHF;;chr5:170736216..170736238,+!p2@TLX3!0.89!6.74!TLX3;;chr12:54332608..54332636,+!p1@HOXC13!0.88!6.57!HOXC13;;chr2:178129853..178129860,-!p14@NFE2L2!0.87!6.41!NFE2L2;;chr7:101917407..101917443,+!p3@CUX1!0.87!6.41!CUX1;;chr7:27239703..27239715,-!p1@HOXA13!0.87!6.41!HOXA13;;chr6:31126291..31126399,+!p1@TCF19!0.86!63.39!TCF19;;chr2:172967621..172967637,-!p1@DLX2!0.86!17.70!DLX2;;chr5:321810..321877,+!p1@AHRR!0.84!19.89!AHRR;;chr16:29818199..29818216,+!p11@MAZ!0.84!10.12!MAZ;;chr3:69915369..69915381,+!p4@MITF!0.84!5.90!MITF;;chr12:3068544..3068597,+!p1@TEAD4!0.83!37.26!TEAD4;;chr10:51572408..51572454,+!p3@NCOA4!0.83!36.25!NCOA4;;chr2:45236540..45236577,-!p1@SIX2!0.83!5.73!SIX2;;chr1:151804244..151804310,-!p1@RORC!0.83!5.73!RORC;;chr10:104155659..104155676,+!p4@NFKB2!0.82!7.08!NFKB2;;chr8:55370487..55370503,+!p1@SOX17!0.82!5.56!SOX17;;chr20:42295745..42295765,+!p1@MYBL2!0.81!95.59!MYBL2;;chrX:131623044..131623089,-!p1@MBNL3!0.79!22.93!MBNL3;;chr6:1389989..1390019,+!p2@FOXF2!0.79!5.23!FOXF2;;chr17:46806067..46806097,-!p1@HOXB13!0.79!5.23!HOXB13;;chr17:17726907..17726958,-!p2@SREBF1!0.78!33.55!SREBF1;;chr21:38071430..38071456,+!p1@SIM2!0.78!5.06!SIM2;;chr12:80084737..80084763,-!p3@PAWR!0.77!20.06!PAWR;;chr10:28034739..28034756,-!p1@MKX!0.76!4.72!MKX;;chr6:10415263..10415274,-!p8@TFAP2A!0.76!4.72!TFAP2A;;chr7:101917482..101917507,+!p6@CUX1!0.76!4.72!CUX1;;chr17:46688334..46688385,-!p1@HOXB7!0.74!6.74!HOXB7;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.74!4.55!SEBOX;;chr1:45805872..45805900,+!p2@TOE1!0.73!11.46!TOE1;;chr12:54379477..54379498,+!p5@HOXC5!0.73!4.38!HOXC5;;chr8:128748308..128748324,+!p2@MYC!0.72!133.86!MYC;;chr1:8934931..8934947,-!p4@ENO1!0.72!15.51!ENO1;;chr22:42229210..42229229,+!p3@SREBF2!0.72!10.79!SREBF2;;chr17:7492684..7492778,-!p2@SOX15!0.72!9.78!SOX15;;chr17:48072574..48072597,-!p1@DLX3!0.72!4.21!DLX3;;chr16:29818160..29818188,+!p6@MAZ!0.71!21.41!MAZ;;chr8:67525443..67525459,-!p2@MYBL1!0.71!6.41!MYBL1;;chr3:138665937..138665968,-!p1@FOXL2!0.70!4.05!FOXL2;;chr1:8938709..8938720,-!p3@ENO1!0.69!218.65!ENO1;;chr20:42295713..42295738,+!p2@MYBL2!0.69!26.13!MYBL2;;chr3:138665969..138665993,-!p2@FOXL2!0.69!3.88!FOXL2;;chr1:23885981..23886002,-!p1@ID3!0.68!774.31!ID3;;chr12:2986275..2986363,-!p1@FOXM1!0.68!43.83!FOXM1;;chrX:131623982..131624011,-!p6@MBNL3!0.68!5.90!MBNL3;;chr17:41277372..41277418,-!p1@BRCA1!0.67!15.17!BRCA1;;chr5:134369643..134369675,-!p4@PITX1!0.67!3.71!PITX1;;chr3:12330560..12330579,+!p1@PPARG!0.66!4.21!PPARG;;chr12:54379136..54379150,+!p4@HOXC5!0.66!3.54!HOXC5;;chr12:54393880..54393962,+!p1@HOXC9!0.66!3.54!HOXC9;;chr13:100623375..100623425,-!p1@ZIC5!0.66!3.54!ZIC5;;chrX:131623026..131623039,-!p5@MBNL3!0.66!3.54!MBNL3;;chr3:128206762..128206781,-!p2@GATA2!0.65!25.29!GATA2;;chr2:178128149..178128198,-!p2@NFE2L2!0.65!21.58!NFE2L2;;chr1:935398..935465,-!p2@HES4!0.65!7.92!HES4;;chr16:54964740..54964789,+!p1@IRX5!0.64!5.23!IRX5;;chr15:67418119..67418162,+!p5@SMAD3!0.64!3.88!SMAD3;;chr11:3400340..3400422,-!p1@ZNF195!0.63!60.52!ZNF195;;chr2:46524897..46524911,+!p2@EPAS1!0.62!10.12!EPAS1;;chr15:96875657..96875760,+!p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4.72!THAP1;;chr17:42297028..42297056,-!p3@UBTF!0.13!4.21!UBTF;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!0.13!3.88!HNRPK;;chr5:76383017..76383068,-!p1@ZBED3!0.13!3.71!ZBED3;;chr1:153895251..153895342,-!p2@GATAD2B!0.13!3.71!GATAD2B;;chr7:148581327..148581347,-!p2@EZH2!0.13!3.37!EZH2;;chr19:18392250..18392260,-!p4@JUND!0.13!3.03!JUND;;chr7:42276822..42276895,-!p2@GLI3!0.13!2.87!GLI3;;chr10:44070016..44070069,-!p1@ZNF239!0.13!2.87!ZNF239;;chr15:37393449..37393528,-!p4@MEIS2!0.13!2.53!MEIS2;;chr16:4323015..4323067,-!p2@TFAP4!0.13!2.53!TFAP4;;chr22:41697497..41697515,+!p2@ZC3H7B!0.13!2.53!ZC3H7B;;chr1:161736125..161736136,+!p5@ATF6!0.13!2.36!ATF6;;chr14:35872453..35872485,-!p2@NFKBIA!0.13!2.19!NFKBIA;;chr18:3450293..3450304,+!p4@TGIF1!0.13!2.19!TGIF1;;chr9:14314522..14314556,-!p3@NFIB!0.13!2.02!NFIB;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.13!1.85!SOHLH2;;chr12:48298765..48298783,-!p2@VDR!0.13!1.69!VDR;;chr2:11606283..11606289,-!p1@E2F6!0.13!1.69!E2F6;;chr4:144435112..144435176,+!p3@SMARCA5!0.13!1.69!SMARCA5;;chr5:43065197..43065244,+!p5@ZNF131!0.13!1.52!ZNF131;;chr2:121493492..121493537,+!p2@GLI2!0.13!1.18!GLI2;;chr18:42260059..42260132,+!p1@SETBP1!0.13!1.18!SETBP1;;chr18:5296138..5296159,-!p3@ZFP161!0.13!1.18!ZFP161;;chr15:64752927..64752950,+!p3@ZNF609!0.13!1.01!ZNF609;;chr1:164528588..164528610,+!p8@PBX1!0.13!1.01!PBX1;;chr12:10875768..10875808,-!p3@CSDA!0.13!1.01!CSDA;;chr12:56583297..56583304,-!p4@SMARCC2!0.13!1.01!SMARCC2;;chr10:96122739..96122750,-!p3@NOC3L!0.13!0.84!NOC3L;;chr16:67596356..67596367,+!p5@CTCF!0.13!0.84!CTCF;;chr18:6414884..6414942,-!p1@L3MBTL4!0.13!0.67!L3MBTL4;;chr11:45202580..45202606,+!p@chr11:45202580..45202606,+!0.13!0.67!PRDM11;;chr12:80083807..80083859,-!p11@PAWR!0.13!0.67!PAWR;;chr5:72744562..72744573,-!p3@FOXD1!0.13!0.67!FOXD1;;chr8:145535378..145535420,+!p4@HSF1!0.13!0.67!HSF1;;chr2:61108808..61108821,+!p3@REL!0.13!0.67!REL;;chr20:55204351..55204377,+!p1@TFAP2C!0.13!0.67!TFAP2C;;chrX:48901030..48901050,-!p4@TFE3!0.13!0.67!TFE3;;chr8:80680024..80680046,-!p2@HEY1!0.13!0.51!HEY1;;chr16:30407021..30407061,+!p3@ZNF48!0.13!0.51!ZNF48;;chr12:3068957..3068978,+!p6@TEAD4!0.13!0.51!TEAD4;;chr12:72056749..72056767,+!p6@THAP2!0.13!0.51!THAP2;;chr1:235344971..235344985,-!p5@ARID4B!0.13!0.51!ARID4B;;chr19:39390320..39390346,+!p5@NFKBIB!0.13!0.34!NFKBIB;;chr19:45254481..45254495,+!p13@BCL3!0.13!0.34!BCL3;;chr19:45579699..45579704,-!p3@ZNF296!0.13!0.34!ZNF296;;chr19:49140255..49140268,-!p9@DBP!0.13!0.34!DBP;;chr19:54024313..54024361,+!p7@ZNF331!0.13!0.34!ZNF331;;chr19:54041467..54041479,+!p13@ZNF331!0.13!0.34!ZNF331;;chr19:54041603..54041615,+!p10@ZNF331!0.13!0.34!ZNF331;;chr19:57791966..57791973,+!p8@ZNF460!0.13!0.34!ZNF460;;chr1:164528667..164528674,+!p18@PBX1!0.13!0.34!PBX1;;chr1:180199500..180199510,+!p2@LHX4!0.13!0.34!LHX4;;chr1:212873061..212873080,-!p4@BATF3!0.13!0.34!BATF3;;chr1:3568870..3568881,+!p5@TP73!0.13!0.34!TP73;;chr1:3569101..3569115,+!p2@TP73!0.13!0.34!TP73;;chr1:40367668..40367684,-!p2@MYCL1!0.13!0.34!MYCL1;;chr1:47903765..47903783,+!p3@BC169308!0.13!0.34!FOXD2;;chr1:59250262..59250296,-!p5@JUN!0.13!0.34!JUN;;chr20:50808639..50808661,-!p6@ZFP64!0.13!0.34!ZFP64;;
|sample_dev_stage=
|ffid_belonging_in_development=UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316
|sample_tissue=
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=56
|sample_ethnicity=
|rna_rin=9.6
|rna_od260/230=2.11
|rna_od260/280=2.01
|sample_cell_type=unclassifiable
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binding;3.13593907821889e-84!GO:0005634;nucleus;1.37227097363135e-82!GO:0043170;macromolecule metabolic process;2.23467153512637e-78!GO:0005515;protein binding;2.57318384905442e-67!GO:0043234;protein complex;1.28872915186309e-63!GO:0044429;mitochondrial part;5.92222038903504e-63!GO:0006396;RNA processing;7.91234484102471e-63!GO:0005840;ribosome;1.92902033347748e-60!GO:0006412;translation;6.29646975289448e-58!GO:0031090;organelle membrane;2.01398900441562e-57!GO:0031967;organelle envelope;1.79821063355983e-54!GO:0031975;envelope;2.95888882957296e-54!GO:0031981;nuclear lumen;3.62449240068956e-52!GO:0003735;structural constituent of ribosome;4.786844107489e-52!GO:0044249;cellular biosynthetic process;5.81350576224392e-51!GO:0009058;biosynthetic process;1.87056208620423e-50!GO:0016043;cellular component organization and biogenesis;3.00334746963108e-50!GO:0043228;non-membrane-bound organelle;6.34046445954672e-46!GO:0043232;intracellular non-membrane-bound organelle;6.34046445954672e-46!GO:0033279;ribosomal subunit;1.36781908519366e-45!GO:0006259;DNA metabolic process;1.84205538523648e-44!GO:0019538;protein metabolic process;1.90434975810724e-44!GO:0005829;cytosol;1.35517950770955e-43!GO:0015031;protein transport;6.05973221208793e-43!GO:0033036;macromolecule localization;1.54072882996622e-42!GO:0016071;mRNA metabolic process;2.36895755509936e-42!GO:0009059;macromolecule biosynthetic process;5.41294693046671e-42!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.75280651839174e-41!GO:0008380;RNA splicing;1.86966834065587e-40!GO:0005740;mitochondrial envelope;6.48680293936807e-40!GO:0043283;biopolymer metabolic process;7.26631223407446e-40!GO:0044260;cellular macromolecule metabolic process;3.76387944587219e-39!GO:0045184;establishment of protein localization;4.73218221118751e-39!GO:0044267;cellular protein metabolic process;8.0450137723889e-39!GO:0008104;protein localization;1.70571878783732e-38!GO:0006397;mRNA processing;2.37532876601957e-38!GO:0019866;organelle inner membrane;2.97664233097035e-38!GO:0006996;organelle organization and biogenesis;7.84084946853773e-38!GO:0031966;mitochondrial membrane;1.6736067999447e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.41362436398751e-37!GO:0065003;macromolecular complex assembly;4.21332069226233e-36!GO:0005743;mitochondrial inner membrane;4.29230036886808e-36!GO:0010467;gene expression;6.38729535889855e-36!GO:0046907;intracellular transport;1.32532920640316e-34!GO:0007049;cell cycle;2.58411215704794e-34!GO:0022607;cellular component assembly;9.64019717077775e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.02905007967947e-30!GO:0005654;nucleoplasm;5.12327448958997e-30!GO:0005681;spliceosome;1.15271706962613e-29!GO:0000166;nucleotide binding;3.0991635935434e-29!GO:0006886;intracellular protein transport;7.31405590643577e-29!GO:0031980;mitochondrial lumen;1.96530755569632e-28!GO:0005759;mitochondrial matrix;1.96530755569632e-28!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.99641237168637e-27!GO:0016462;pyrophosphatase activity;3.1287063327709e-27!GO:0016817;hydrolase activity, acting on acid anhydrides;4.35432597058925e-27!GO:0006974;response to DNA damage stimulus;1.21891010625169e-26!GO:0017111;nucleoside-triphosphatase activity;3.42624624271323e-26!GO:0044445;cytosolic part;4.60724105794158e-26!GO:0005730;nucleolus;5.20687701840888e-26!GO:0006119;oxidative phosphorylation;1.52482380481046e-25!GO:0000278;mitotic cell cycle;1.8217387441615e-25!GO:0022402;cell cycle process;2.09992100748952e-25!GO:0044455;mitochondrial membrane part;2.42589988379925e-25!GO:0005694;chromosome;7.9984135233215e-25!GO:0015934;large ribosomal subunit;1.55094988061999e-24!GO:0044451;nucleoplasm part;1.10888790667105e-23!GO:0044427;chromosomal part;5.36590650854057e-23!GO:0006281;DNA repair;2.11219392471766e-22!GO:0015935;small ribosomal subunit;2.93733271864712e-22!GO:0051649;establishment of cellular localization;3.72150678767463e-22!GO:0003676;nucleic acid binding;4.76021576194722e-22!GO:0051641;cellular localization;4.94772716567059e-22!GO:0051186;cofactor metabolic process;6.41604521330334e-22!GO:0006457;protein folding;1.29959278412385e-21!GO:0012505;endomembrane system;2.07488258690551e-21!GO:0016874;ligase activity;3.13740004220969e-21!GO:0032553;ribonucleotide binding;2.20824057429459e-20!GO:0032555;purine ribonucleotide binding;2.20824057429459e-20!GO:0005783;endoplasmic reticulum;2.25376928290859e-20!GO:0006260;DNA replication;2.53692857385814e-20!GO:0017076;purine nucleotide binding;3.15724350218714e-20!GO:0022403;cell cycle phase;3.19526813128256e-20!GO:0009719;response to endogenous stimulus;6.42273267055222e-20!GO:0042254;ribosome biogenesis and assembly;3.16004972890156e-19!GO:0005746;mitochondrial respiratory chain;3.37471437434383e-19!GO:0000087;M phase of mitotic cell cycle;8.22562258670408e-19!GO:0005761;mitochondrial ribosome;9.11663671506311e-19!GO:0000313;organellar ribosome;9.11663671506311e-19!GO:0022618;protein-RNA complex assembly;1.17869505077916e-18!GO:0007067;mitosis;1.51149928255534e-18!GO:0044432;endoplasmic reticulum part;4.88109243139936e-18!GO:0005524;ATP binding;5.25354327917343e-18!GO:0032559;adenyl ribonucleotide binding;7.78293749109174e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.837246132757e-18!GO:0006732;coenzyme metabolic process;1.69434299577883e-17!GO:0030554;adenyl nucleotide binding;1.87366336120489e-17!GO:0000502;proteasome complex (sensu Eukaryota);2.11979903953812e-17!GO:0044265;cellular macromolecule catabolic process;2.79640262527968e-17!GO:0051276;chromosome organization and biogenesis;3.05361049064562e-17!GO:0044248;cellular catabolic process;3.56876891876239e-17!GO:0016887;ATPase activity;3.61150595090683e-17!GO:0050136;NADH dehydrogenase (quinone) activity;4.27532748782824e-17!GO:0003954;NADH dehydrogenase activity;4.27532748782824e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.27532748782824e-17!GO:0051301;cell division;4.86535291715222e-17!GO:0042623;ATPase activity, coupled;6.50002494567798e-17!GO:0008135;translation factor activity, nucleic acid binding;9.74911517894741e-17!GO:0006512;ubiquitin cycle;1.35659422734334e-16!GO:0006399;tRNA metabolic process;2.34078826958061e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.62438529623973e-16!GO:0006605;protein targeting;4.73424633693024e-16!GO:0000279;M phase;5.2603863363427e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;9.6614455142778e-16!GO:0044453;nuclear membrane part;1.11783220762274e-15!GO:0019941;modification-dependent protein catabolic process;1.7956005465378e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.7956005465378e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.2414412868431e-15!GO:0042773;ATP synthesis coupled electron transport;2.2414412868431e-15!GO:0044257;cellular protein catabolic process;2.93633136327233e-15!GO:0005635;nuclear envelope;3.22370256000529e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;4.11703912119069e-15!GO:0000375;RNA splicing, via transesterification reactions;4.11703912119069e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.11703912119069e-15!GO:0030964;NADH dehydrogenase complex (quinone);4.12950326964792e-15!GO:0045271;respiratory chain complex I;4.12950326964792e-15!GO:0005747;mitochondrial respiratory chain complex I;4.12950326964792e-15!GO:0048770;pigment granule;4.18367678016564e-15!GO:0042470;melanosome;4.18367678016564e-15!GO:0006511;ubiquitin-dependent protein catabolic process;4.18742074655976e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.718532765095e-15!GO:0051082;unfolded protein binding;8.69951119569398e-15!GO:0031965;nuclear membrane;1.21067573510534e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.26866888199339e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.78149613669425e-14!GO:0009057;macromolecule catabolic process;1.80203208293012e-14!GO:0043285;biopolymer catabolic process;1.80809127354124e-14!GO:0005789;endoplasmic reticulum membrane;4.52076846069978e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.71298187052335e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;8.84759223752193e-14!GO:0000785;chromatin;9.39605572079578e-14!GO:0009055;electron carrier activity;1.46019948849159e-13!GO:0008134;transcription factor binding;1.54676448265781e-13!GO:0005643;nuclear pore;1.54676448265781e-13!GO:0006364;rRNA processing;1.96798318091163e-13!GO:0051726;regulation of cell cycle;3.02758431820926e-13!GO:0006323;DNA packaging;3.08900906909417e-13!GO:0000074;regulation of progression through cell cycle;3.49153464127941e-13!GO:0003743;translation initiation factor activity;3.95292161439979e-13!GO:0016072;rRNA metabolic process;5.08274358459912e-13!GO:0065002;intracellular protein transport across a membrane;5.45529549594956e-13!GO:0016070;RNA metabolic process;8.43032699876751e-13!GO:0009259;ribonucleotide metabolic process;1.64357849542129e-12!GO:0004386;helicase activity;2.14364183893974e-12!GO:0048193;Golgi vesicle transport;2.84387333547056e-12!GO:0051188;cofactor biosynthetic process;3.07033961341661e-12!GO:0050657;nucleic acid transport;3.52278285999877e-12!GO:0051236;establishment of RNA localization;3.52278285999877e-12!GO:0050658;RNA transport;3.52278285999877e-12!GO:0030163;protein catabolic process;3.73049868152618e-12!GO:0006403;RNA localization;4.33838724697106e-12!GO:0006333;chromatin assembly or disassembly;5.38666730163774e-12!GO:0006163;purine nucleotide metabolic process;5.93991650606548e-12!GO:0006413;translational initiation;7.34121066505691e-12!GO:0006913;nucleocytoplasmic transport;7.68278743967229e-12!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;9.0187323067951e-12!GO:0008026;ATP-dependent helicase activity;1.10285530433993e-11!GO:0065004;protein-DNA complex assembly;1.18223265382751e-11!GO:0046930;pore complex;1.76288059884194e-11!GO:0051169;nuclear transport;2.46149465149869e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.87455887992575e-11!GO:0012501;programmed cell death;5.34005449649406e-11!GO:0016604;nuclear body;5.40506304516502e-11!GO:0009150;purine ribonucleotide metabolic process;5.89023944435116e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.05944507159027e-11!GO:0009260;ribonucleotide biosynthetic process;7.56787990940119e-11!GO:0006915;apoptosis;8.87707930840533e-11!GO:0006164;purine nucleotide biosynthetic process;1.15899340087124e-10!GO:0007005;mitochondrion organization and biogenesis;1.18796643534886e-10!GO:0005794;Golgi apparatus;1.51412646594236e-10!GO:0016192;vesicle-mediated transport;1.72535093837157e-10!GO:0016491;oxidoreductase activity;1.73867702761052e-10!GO:0009117;nucleotide metabolic process;1.87050370530802e-10!GO:0051028;mRNA transport;2.42052969762751e-10!GO:0009060;aerobic respiration;2.93426431003864e-10!GO:0008565;protein transporter activity;3.02591519521465e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.05251825726945e-10!GO:0004812;aminoacyl-tRNA ligase activity;3.05251825726945e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.05251825726945e-10!GO:0006461;protein complex assembly;3.07837370566722e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.69480334006692e-10!GO:0009108;coenzyme biosynthetic process;3.95830110322508e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.12930260203049e-10!GO:0009199;ribonucleoside triphosphate metabolic process;5.42465757530834e-10!GO:0008639;small protein conjugating enzyme activity;6.34556878063961e-10!GO:0009141;nucleoside triphosphate metabolic process;6.60562240196094e-10!GO:0009056;catabolic process;6.61973121483158e-10!GO:0043038;amino acid activation;6.84318726916003e-10!GO:0006418;tRNA aminoacylation for protein translation;6.84318726916003e-10!GO:0043039;tRNA aminoacylation;6.84318726916003e-10!GO:0016779;nucleotidyltransferase activity;7.32208903019007e-10!GO:0006261;DNA-dependent DNA replication;7.90645388232832e-10!GO:0043412;biopolymer modification;9.61409967911855e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.10373735868174e-09!GO:0045333;cellular respiration;1.11788645066125e-09!GO:0008219;cell death;1.11945465690317e-09!GO:0016265;death;1.11945465690317e-09!GO:0016787;hydrolase activity;1.2522501414276e-09!GO:0003697;single-stranded DNA binding;1.3026316613301e-09!GO:0043566;structure-specific DNA binding;1.32960244880637e-09!GO:0006446;regulation of translational initiation;1.33610738155948e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.33610738155948e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.33610738155948e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.64701414747758e-09!GO:0006334;nucleosome assembly;1.67074242921336e-09!GO:0015986;ATP synthesis coupled proton transport;1.67162110969662e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.67162110969662e-09!GO:0004842;ubiquitin-protein ligase activity;1.9525995234943e-09!GO:0006366;transcription from RNA polymerase II promoter;2.4379858218677e-09!GO:0019787;small conjugating protein ligase activity;3.63036634377178e-09!GO:0046034;ATP metabolic process;3.74234351435639e-09!GO:0031497;chromatin assembly;4.53598748579917e-09!GO:0009142;nucleoside triphosphate biosynthetic process;4.57915039017484e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.57915039017484e-09!GO:0019829;cation-transporting ATPase activity;9.85091461126304e-09!GO:0017038;protein import;1.06577800496427e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.20912773214811e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.20912773214811e-08!GO:0016607;nuclear speck;1.23455652797785e-08!GO:0006099;tricarboxylic acid cycle;1.48457257951072e-08!GO:0046356;acetyl-CoA catabolic process;1.48457257951072e-08!GO:0006084;acetyl-CoA metabolic process;1.67354148230738e-08!GO:0005819;spindle;2.01253628291118e-08!GO:0051329;interphase of mitotic cell cycle;2.09672106750167e-08!GO:0016740;transferase activity;2.55634879976943e-08!GO:0051325;interphase;2.65730971409809e-08!GO:0006754;ATP biosynthetic process;2.72679848768207e-08!GO:0006753;nucleoside phosphate metabolic process;2.72679848768207e-08!GO:0016881;acid-amino acid ligase activity;2.74226074090319e-08!GO:0003712;transcription cofactor activity;3.97744059163033e-08!GO:0006752;group transfer coenzyme metabolic process;4.70425357229604e-08!GO:0000775;chromosome, pericentric region;4.79648045173221e-08!GO:0016469;proton-transporting two-sector ATPase complex;5.03532481016616e-08!GO:0005793;ER-Golgi intermediate compartment;5.55923253549633e-08!GO:0015078;hydrogen ion transmembrane transporter activity;9.71830339027957e-08!GO:0008033;tRNA processing;1.03140204868586e-07!GO:0015630;microtubule cytoskeleton;1.0463323261209e-07!GO:0006464;protein modification process;1.06667117706626e-07!GO:0005657;replication fork;1.51814833708027e-07!GO:0051187;cofactor catabolic process;1.61500583946456e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.20192983877241e-07!GO:0042981;regulation of apoptosis;2.37601395814751e-07!GO:0043067;regulation of programmed cell death;2.52569855781076e-07!GO:0009109;coenzyme catabolic process;2.70683667125764e-07!GO:0006091;generation of precursor metabolites and energy;2.84131510085536e-07!GO:0016568;chromatin modification;2.92908318930405e-07!GO:0045259;proton-transporting ATP synthase complex;4.00023305886212e-07!GO:0003899;DNA-directed RNA polymerase activity;4.23010702524921e-07!GO:0005667;transcription factor complex;4.34841229825456e-07!GO:0008094;DNA-dependent ATPase activity;4.37317405785125e-07!GO:0043623;cellular protein complex assembly;4.80929731811759e-07!GO:0005762;mitochondrial large ribosomal subunit;4.91791613948083e-07!GO:0000315;organellar large ribosomal subunit;4.91791613948083e-07!GO:0005768;endosome;6.52997075271009e-07!GO:0005839;proteasome core complex (sensu Eukaryota);6.90039169589488e-07!GO:0000075;cell cycle checkpoint;7.29669224684234e-07!GO:0007051;spindle organization and biogenesis;8.13589822216503e-07!GO:0000245;spliceosome assembly;8.88404262599381e-07!GO:0030120;vesicle coat;8.88404262599381e-07!GO:0030662;coated vesicle membrane;8.88404262599381e-07!GO:0000079;regulation of cyclin-dependent protein kinase activity;9.80102821002707e-07!GO:0043687;post-translational protein modification;1.00165179768832e-06!GO:0008654;phospholipid biosynthetic process;1.00189276586155e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.1267721801194e-06!GO:0003724;RNA helicase activity;1.31026992105574e-06!GO:0032446;protein modification by small protein conjugation;1.36670880862393e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.57705093910336e-06!GO:0000151;ubiquitin ligase complex;1.6312217136132e-06!GO:0048475;coated membrane;1.67493796948421e-06!GO:0030117;membrane coat;1.67493796948421e-06!GO:0016567;protein ubiquitination;1.83777368876382e-06!GO:0051427;hormone receptor binding;2.28575784933575e-06!GO:0003924;GTPase activity;2.65139459462603e-06!GO:0009165;nucleotide biosynthetic process;3.0093400349369e-06!GO:0016853;isomerase activity;3.08929624776776e-06!GO:0044452;nucleolar part;3.39177315810909e-06!GO:0004298;threonine endopeptidase activity;3.86906042498819e-06!GO:0000786;nucleosome;4.8603088203598e-06!GO:0000314;organellar small ribosomal subunit;5.0076452694245e-06!GO:0005763;mitochondrial small ribosomal subunit;5.0076452694245e-06!GO:0051168;nuclear export;5.45404546205883e-06!GO:0035257;nuclear hormone receptor binding;5.59712549322611e-06!GO:0051246;regulation of protein metabolic process;6.23281072187035e-06!GO:0006302;double-strand break repair;6.32471661174473e-06!GO:0006626;protein targeting to mitochondrion;6.52812791048604e-06!GO:0006613;cotranslational protein targeting to membrane;6.7569162445014e-06!GO:0006916;anti-apoptosis;6.91085389333248e-06!GO:0005813;centrosome;6.97031838090814e-06!GO:0043069;negative regulation of programmed cell death;8.33108554779259e-06!GO:0051170;nuclear import;8.42486622242937e-06!GO:0006082;organic acid metabolic process;9.75729293198924e-06!GO:0019752;carboxylic acid metabolic process;1.01206976478166e-05!GO:0003682;chromatin binding;1.04544247862855e-05!GO:0043066;negative regulation of apoptosis;1.31669926509871e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.50246001455465e-05!GO:0015399;primary active transmembrane transporter activity;1.50246001455465e-05!GO:0006414;translational elongation;1.50248489050152e-05!GO:0005815;microtubule organizing center;1.50248489050152e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.58093696990275e-05!GO:0048523;negative regulation of cellular process;1.59801538752714e-05!GO:0006839;mitochondrial transport;1.68244723708951e-05!GO:0045454;cell redox homeostasis;2.00805826104842e-05!GO:0046483;heterocycle metabolic process;2.02392071910742e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.02721984770466e-05!GO:0005788;endoplasmic reticulum lumen;2.45600601332898e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.45600601332898e-05!GO:0008168;methyltransferase activity;2.71854794898632e-05!GO:0006606;protein import into nucleus;2.9977486682263e-05!GO:0046474;glycerophospholipid biosynthetic process;3.110464396553e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.23341067451554e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.59886602142986e-05!GO:0003690;double-stranded DNA binding;3.74969298795908e-05!GO:0008186;RNA-dependent ATPase activity;4.28807103649529e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.34005531682466e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.46399927151894e-05!GO:0031324;negative regulation of cellular metabolic process;4.94677790927249e-05!GO:0044440;endosomal part;5.63134887244194e-05!GO:0010008;endosome membrane;5.63134887244194e-05!GO:0045786;negative regulation of progression through cell cycle;5.63834031915887e-05!GO:0005770;late endosome;5.83631832669476e-05!GO:0005525;GTP binding;5.892603076821e-05!GO:0019867;outer membrane;6.12311569625044e-05!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;6.21323125102223e-05!GO:0043681;protein import into mitochondrion;6.25968560773748e-05!GO:0030867;rough endoplasmic reticulum membrane;6.84791151054054e-05!GO:0043021;ribonucleoprotein binding;7.01062637760392e-05!GO:0003713;transcription coactivator activity;7.27402380013091e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;7.27402380013091e-05!GO:0051052;regulation of DNA metabolic process;7.27402380013091e-05!GO:0000776;kinetochore;7.2755470116216e-05!GO:0007088;regulation of mitosis;7.47207067957923e-05!GO:0050662;coenzyme binding;7.94464115710147e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;8.17907864215153e-05!GO:0006383;transcription from RNA polymerase III promoter;8.3781410551713e-05!GO:0003684;damaged DNA binding;8.42037108997704e-05!GO:0031968;organelle outer membrane;8.88946836718122e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;9.23844312010495e-05!GO:0006612;protein targeting to membrane;9.34401868664838e-05!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;9.74899229491828e-05!GO:0051789;response to protein stimulus;0.000101351756858053!GO:0006986;response to unfolded protein;0.000101351756858053!GO:0016859;cis-trans isomerase activity;0.000101591596353948!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00010281832803093!GO:0016126;sterol biosynthetic process;0.000104000595706164!GO:0009892;negative regulation of metabolic process;0.000115888549518585!GO:0007059;chromosome segregation;0.000118487288473191!GO:0046489;phosphoinositide biosynthetic process;0.00012100986616414!GO:0004004;ATP-dependent RNA helicase activity;0.000123044345948025!GO:0048471;perinuclear region of cytoplasm;0.000126863609316323!GO:0006793;phosphorus metabolic process;0.00014050530833881!GO:0006796;phosphate metabolic process;0.00014050530833881!GO:0006310;DNA recombination;0.000166710551920952!GO:0000059;protein import into nucleus, docking;0.000182916286572265!GO:0016564;transcription repressor activity;0.000182916286572265!GO:0004527;exonuclease activity;0.000183424175575008!GO:0005773;vacuole;0.000202224992557145!GO:0043284;biopolymer biosynthetic process;0.000207996165789745!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000237508745814505!GO:0003678;DNA helicase activity;0.000245820062034904!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000254597847091829!GO:0004518;nuclease activity;0.000258042578685919!GO:0042802;identical protein binding;0.00026080234194047!GO:0044431;Golgi apparatus part;0.000272196961742816!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000288544720084805!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0002929743822801!GO:0005741;mitochondrial outer membrane;0.0002929743822801!GO:0030880;RNA polymerase complex;0.000318351842477383!GO:0043596;nuclear replication fork;0.00032411932035856!GO:0048519;negative regulation of biological process;0.000330410534381325!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000338577324175063!GO:0048037;cofactor binding;0.000344345280545587!GO:0006695;cholesterol biosynthetic process;0.000346316638683192!GO:0006650;glycerophospholipid metabolic process;0.000346487287934197!GO:0006520;amino acid metabolic process;0.00035096047006964!GO:0019843;rRNA binding;0.000365413516163717!GO:0003729;mRNA binding;0.000437215274946935!GO:0005791;rough endoplasmic reticulum;0.000444702816616255!GO:0009112;nucleobase metabolic process;0.000465331109963653!GO:0005048;signal sequence binding;0.000481597221573993!GO:0016310;phosphorylation;0.0004904712839601!GO:0033116;ER-Golgi intermediate compartment membrane;0.000492587349550957!GO:0051920;peroxiredoxin activity;0.000496770584179374!GO:0008610;lipid biosynthetic process;0.000504632621270649!GO:0005798;Golgi-associated vesicle;0.000508875035684419!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000517711712939754!GO:0031072;heat shock protein binding;0.000549554166323523!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00055036194396941!GO:0000323;lytic vacuole;0.000565313922573615!GO:0005764;lysosome;0.000565313922573615!GO:0032561;guanyl ribonucleotide binding;0.000593355284221931!GO:0019001;guanyl nucleotide binding;0.000593355284221931!GO:0005684;U2-dependent spliceosome;0.000617959880018163!GO:0016363;nuclear matrix;0.000645767029650682!GO:0030176;integral to endoplasmic reticulum membrane;0.000670580559666464!GO:0031252;leading edge;0.000681169960076441!GO:0043492;ATPase activity, coupled to movement of substances;0.000683391181219424!GO:0006284;base-excision repair;0.000695354309810533!GO:0051287;NAD binding;0.000720192778069111!GO:0065009;regulation of a molecular function;0.000757333087469635!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000778020334341934!GO:0000428;DNA-directed RNA polymerase complex;0.000778020334341934!GO:0008361;regulation of cell size;0.000792892087663033!GO:0001558;regulation of cell growth;0.000799333697652499!GO:0005885;Arp2/3 protein complex;0.000822678075032923!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000822678075032923!GO:0007006;mitochondrial membrane organization and biogenesis;0.000829192520204912!GO:0015992;proton transport;0.000841945110307146!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000846628168228478!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000846628168228478!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000846628168228478!GO:0006275;regulation of DNA replication;0.000860860636972298!GO:0016049;cell growth;0.000876141665216374!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.000893156742308346!GO:0016563;transcription activator activity;0.000899536544260953!GO:0031988;membrane-bound vesicle;0.000922027579865947!GO:0006818;hydrogen transport;0.000958428437233133!GO:0032508;DNA duplex unwinding;0.00103069057782145!GO:0032392;DNA geometric change;0.00103069057782145!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00103723648649768!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00103723648649768!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00105076047314604!GO:0044262;cellular carbohydrate metabolic process;0.00106350686832772!GO:0005905;coated pit;0.00106385380350047!GO:0007052;mitotic spindle organization and biogenesis;0.00107194888499499!GO:0035258;steroid hormone receptor binding;0.00108819012199457!GO:0051540;metal cluster binding;0.00112024975123696!GO:0051536;iron-sulfur cluster binding;0.00112024975123696!GO:0030132;clathrin coat of coated pit;0.00112024975123696!GO:0051087;chaperone binding;0.00112415776162569!GO:0006405;RNA export from nucleus;0.00116112120392712!GO:0006506;GPI anchor biosynthetic process;0.00119336995612944!GO:0000082;G1/S transition of mitotic cell cycle;0.00119470426692638!GO:0016023;cytoplasmic membrane-bound vesicle;0.00119933645620639!GO:0006270;DNA replication initiation;0.00129713529059734!GO:0030384;phosphoinositide metabolic process;0.00130550937190976!GO:0009116;nucleoside metabolic process;0.00131550321764432!GO:0006767;water-soluble vitamin metabolic process;0.00132626882793188!GO:0003711;transcription elongation regulator activity;0.00132691442602083!GO:0048500;signal recognition particle;0.00139424913636088!GO:0046467;membrane lipid biosynthetic process;0.00142429465213313!GO:0000049;tRNA binding;0.00143814003146274!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00150417328845072!GO:0008312;7S RNA binding;0.00155019701722517!GO:0048487;beta-tubulin binding;0.00157748886019438!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00161684362573831!GO:0043601;nuclear replisome;0.00169848609374357!GO:0030894;replisome;0.00169848609374357!GO:0007093;mitotic cell cycle checkpoint;0.00170248813360866!GO:0006611;protein export from nucleus;0.00177622961081789!GO:0006118;electron transport;0.00178931375451493!GO:0008320;protein transmembrane transporter activity;0.00180651715730657!GO:0042770;DNA damage response, signal transduction;0.00182105135091616!GO:0016044;membrane organization and biogenesis;0.00186734553642229!GO:0009451;RNA modification;0.00188694020115131!GO:0006505;GPI anchor metabolic process;0.00191560761693006!GO:0006007;glucose catabolic process;0.00196814709676976!GO:0000139;Golgi membrane;0.00199219210393672!GO:0006950;response to stress;0.0020198853213901!GO:0000086;G2/M transition of mitotic cell cycle;0.00206025717019014!GO:0003714;transcription corepressor activity;0.00208174297394286!GO:0006268;DNA unwinding during replication;0.00209432983295335!GO:0051252;regulation of RNA metabolic process;0.00209983697935601!GO:0030118;clathrin coat;0.00209983697935601!GO:0006352;transcription initiation;0.00216313471106943!GO:0030663;COPI coated vesicle membrane;0.00219693132587517!GO:0030126;COPI vesicle coat;0.00219693132587517!GO:0008180;signalosome;0.00246136526695775!GO:0005769;early endosome;0.00263238181264306!GO:0008408;3'-5' exonuclease activity;0.00268042127288653!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00277421832892992!GO:0005876;spindle microtubule;0.00278924075140162!GO:0000096;sulfur amino acid metabolic process;0.00290574709724594!GO:0006497;protein amino acid lipidation;0.00291253658752461!GO:0003746;translation elongation factor activity;0.00291253658752461!GO:0016272;prefoldin complex;0.00294264183563464!GO:0042393;histone binding;0.0029579717706279!GO:0000178;exosome (RNase complex);0.00301014299465655!GO:0006519;amino acid and derivative metabolic process;0.00314705722831121!GO:0006595;polyamine metabolic process;0.00315099259718899!GO:0007010;cytoskeleton organization and biogenesis;0.00318024866226949!GO:0005758;mitochondrial intermembrane space;0.00320192796656864!GO:0006401;RNA catabolic process;0.00320778340417252!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00346634961970741!GO:0045047;protein targeting to ER;0.00346634961970741!GO:0022884;macromolecule transmembrane transporter activity;0.00351921735719695!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.00351921735719695!GO:0008632;apoptotic program;0.00352857577337024!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00357746412176626!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00363884450480554!GO:0000228;nuclear chromosome;0.00367472739291949!GO:0006733;oxidoreduction coenzyme metabolic process;0.0037588078396175!GO:0006144;purine base metabolic process;0.00384287422833579!GO:0005637;nuclear inner membrane;0.00395615920946494!GO:0004532;exoribonuclease activity;0.00405935994723956!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00405935994723956!GO:0000287;magnesium ion binding;0.0041334209441416!GO:0019899;enzyme binding;0.00449694807427043!GO:0031982;vesicle;0.00461558480099753!GO:0005874;microtubule;0.00468254041997921!GO:0006400;tRNA modification;0.00485213560448518!GO:0016481;negative regulation of transcription;0.00486328333961336!GO:0008022;protein C-terminus binding;0.00501511778148396!GO:0007017;microtubule-based process;0.00503817577891671!GO:0006891;intra-Golgi vesicle-mediated transport;0.00515913455852053!GO:0048522;positive regulation of cellular process;0.00538116308800355!GO:0003725;double-stranded RNA binding;0.00538235705587686!GO:0006402;mRNA catabolic process;0.00543305488558022!GO:0040008;regulation of growth;0.00564311024853671!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00575486930598733!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00575486930598733!GO:0015002;heme-copper terminal oxidase activity;0.00575486930598733!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00575486930598733!GO:0004129;cytochrome-c oxidase activity;0.00575486930598733!GO:0016251;general RNA polymerase II transcription factor activity;0.00580275371151334!GO:0004003;ATP-dependent DNA helicase activity;0.00580446361230933!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00581001095213517!GO:0006289;nucleotide-excision repair;0.00589866073592674!GO:0051338;regulation of transferase activity;0.00594739948878078!GO:0008629;induction of apoptosis by intracellular signals;0.00595240245062166!GO:0030137;COPI-coated vesicle;0.00599503143892448!GO:0015631;tubulin binding;0.00599503143892448!GO:0045792;negative regulation of cell size;0.00622623780858982!GO:0046982;protein heterodimerization activity;0.00627453183316663!GO:0006778;porphyrin metabolic process;0.00657800054552523!GO:0033013;tetrapyrrole metabolic process;0.00657800054552523!GO:0031410;cytoplasmic vesicle;0.00658354973123758!GO:0030308;negative regulation of cell growth;0.00658354973123758!GO:0050790;regulation of catalytic activity;0.00662634477836918!GO:0022890;inorganic cation transmembrane transporter activity;0.00679562923601471!GO:0031570;DNA integrity checkpoint;0.00708230254860416!GO:0008139;nuclear localization sequence binding;0.00710675014297737!GO:0008652;amino acid biosynthetic process;0.00769408843387661!GO:0043414;biopolymer methylation;0.0079338016347078!GO:0000922;spindle pole;0.00807234140773731!GO:0006807;nitrogen compound metabolic process;0.00808257538847501!GO:0043549;regulation of kinase activity;0.0081228722419109!GO:0043065;positive regulation of apoptosis;0.00822894089423295!GO:0016408;C-acyltransferase activity;0.00845535508515587!GO:0004526;ribonuclease P activity;0.00848621407200381!GO:0016125;sterol metabolic process;0.00853309420783581!GO:0031124;mRNA 3'-end processing;0.00867699106204452!GO:0032259;methylation;0.00873218027329456!GO:0008637;apoptotic mitochondrial changes;0.00873218027329456!GO:0043154;negative regulation of caspase activity;0.00877184799912501!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00881442743486647!GO:0007050;cell cycle arrest;0.00904094509768465!GO:0005832;chaperonin-containing T-complex;0.00904094509768465!GO:0004549;tRNA-specific ribonuclease activity;0.00921963712597251!GO:0046983;protein dimerization activity;0.0093406863210678!GO:0043624;cellular protein complex disassembly;0.00937460293764559!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00957550908766718!GO:0051539;4 iron, 4 sulfur cluster binding;0.0096921074864074!GO:0006509;membrane protein ectodomain proteolysis;0.00987223862950395!GO:0033619;membrane protein proteolysis;0.00987223862950395!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.00987639237505789!GO:0009124;nucleoside monophosphate biosynthetic process;0.0100692996141948!GO:0009123;nucleoside monophosphate metabolic process;0.0100692996141948!GO:0043068;positive regulation of programmed cell death;0.0101107935668496!GO:0042158;lipoprotein biosynthetic process;0.0102639937222154!GO:0009303;rRNA transcription;0.0103265739592369!GO:0000725;recombinational repair;0.0104728754480165!GO:0000724;double-strand break repair via homologous recombination;0.0104728754480165!GO:0030658;transport vesicle membrane;0.0105316202208429!GO:0007243;protein kinase cascade;0.0106138790404173!GO:0007021;tubulin folding;0.0106138790404173!GO:0043433;negative regulation of transcription factor activity;0.0106138790404173!GO:0009119;ribonucleoside metabolic process;0.0106225597454809!GO:0016407;acetyltransferase activity;0.011024584861398!GO:0000339;RNA cap binding;0.0114806823369643!GO:0030521;androgen receptor signaling pathway;0.0114806823369643!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0119067140294607!GO:0031970;organelle envelope lumen;0.0119162225855503!GO:0043022;ribosome binding;0.0122273798262257!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0123821292945042!GO:0046966;thyroid hormone receptor binding;0.0126315121384689!GO:0009308;amine metabolic process;0.0126470790019349!GO:0004523;ribonuclease H activity;0.0128274023081343!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0128834416259579!GO:0005862;muscle thin filament tropomyosin;0.0129987081324559!GO:0000070;mitotic sister chromatid segregation;0.0129987081324559!GO:0045859;regulation of protein kinase activity;0.0131120584331695!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.013470799377208!GO:0000175;3'-5'-exoribonuclease activity;0.013537200645364!GO:0006066;alcohol metabolic process;0.0139531126255866!GO:0050681;androgen receptor binding;0.0139531126255866!GO:0006096;glycolysis;0.0139670971600732!GO:0008234;cysteine-type peptidase activity;0.0140526825032865!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0140946446737224!GO:0000819;sister chromatid segregation;0.0141094382393987!GO:0030119;AP-type membrane coat adaptor complex;0.0141883646945129!GO:0030125;clathrin vesicle coat;0.0141883646945129!GO:0030665;clathrin coated vesicle membrane;0.0141883646945129!GO:0031902;late endosome membrane;0.0144126837586541!GO:0006740;NADPH regeneration;0.0144464213636284!GO:0006098;pentose-phosphate shunt;0.0144464213636284!GO:0006338;chromatin remodeling;0.0145641947326231!GO:0006779;porphyrin biosynthetic process;0.0145641947326231!GO:0033014;tetrapyrrole biosynthetic process;0.0145641947326231!GO:0004540;ribonuclease activity;0.0149279892951907!GO:0043488;regulation of mRNA stability;0.0152946536150063!GO:0043487;regulation of RNA stability;0.0152946536150063!GO:0050794;regulation of cellular process;0.0155216852547459!GO:0044438;microbody part;0.0159170474245215!GO:0044439;peroxisomal part;0.0159170474245215!GO:0007034;vacuolar transport;0.0161751318688681!GO:0050178;phenylpyruvate tautomerase activity;0.016505200755633!GO:0004860;protein kinase inhibitor activity;0.0166023910411573!GO:0003702;RNA polymerase II transcription factor activity;0.0168020144506612!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0168422713996698!GO:0030131;clathrin adaptor complex;0.0171061112045976!GO:0004861;cyclin-dependent protein kinase inhibitor activity;0.017531358034155!GO:0006378;mRNA polyadenylation;0.0176591651848899!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0178448503613835!GO:0045039;protein import into mitochondrial inner membrane;0.0178448503613835!GO:0032984;macromolecular complex disassembly;0.0178561064995249!GO:0016788;hydrolase activity, acting on ester bonds;0.0179780188041683!GO:0030660;Golgi-associated vesicle membrane;0.018660681590048!GO:0051128;regulation of cellular component organization and biogenesis;0.020385448159807!GO:0044255;cellular lipid metabolic process;0.020449136746057!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0206182774488128!GO:0008538;proteasome activator activity;0.0207354067098473!GO:0044454;nuclear chromosome part;0.0215243689692171!GO:0009161;ribonucleoside monophosphate metabolic process;0.0216106267773026!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0216106267773026!GO:0006769;nicotinamide metabolic process;0.0216813933369548!GO:0046365;monosaccharide catabolic process;0.021796697592104!GO:0042168;heme metabolic process;0.021796697592104!GO:0009003;signal peptidase activity;0.0219740299055476!GO:0000030;mannosyltransferase activity;0.0221694662443617!GO:0006979;response to oxidative stress;0.0224565270323804!GO:0006730;one-carbon compound metabolic process;0.0224565270323804!GO:0031529;ruffle organization and biogenesis;0.0225255580146856!GO:0005663;DNA replication factor C complex;0.0226951903034214!GO:0051053;negative regulation of DNA metabolic process;0.0229789111458356!GO:0000792;heterochromatin;0.0230995209594439!GO:0007346;regulation of progression through mitotic cell cycle;0.0234322632779625!GO:0031903;microbody membrane;0.0236230999023854!GO:0005778;peroxisomal membrane;0.0236230999023854!GO:0000726;non-recombinational repair;0.0238074791638185!GO:0030508;thiol-disulfide exchange intermediate activity;0.0238361657544588!GO:0043189;H4/H2A histone acetyltransferase complex;0.0238361657544588!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0238361657544588!GO:0043241;protein complex disassembly;0.024078323281189!GO:0019783;small conjugating protein-specific protease activity;0.0242379774872616!GO:0005669;transcription factor TFIID complex;0.0243196878425888!GO:0003923;GPI-anchor transamidase activity;0.0243960269603275!GO:0016255;attachment of GPI anchor to protein;0.0243960269603275!GO:0042765;GPI-anchor transamidase complex;0.0243960269603275!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0250983185961682!GO:0017166;vinculin binding;0.0250983185961682!GO:0005869;dynactin complex;0.0251805981935936!GO:0000781;chromosome, telomeric region;0.0254544354925106!GO:0016197;endosome transport;0.0255672500107263!GO:0046164;alcohol catabolic process;0.0258528591033724!GO:0006643;membrane lipid metabolic process;0.025861364002756!GO:0016790;thiolester hydrolase activity;0.0260393842758367!GO:0006220;pyrimidine nucleotide metabolic process;0.0260393842758367!GO:0006360;transcription from RNA polymerase I promoter;0.0261042305147097!GO:0030659;cytoplasmic vesicle membrane;0.0263842132668764!GO:0006596;polyamine biosynthetic process;0.0265636204783572!GO:0032200;telomere organization and biogenesis;0.0267614977128903!GO:0000723;telomere maintenance;0.0267614977128903!GO:0048146;positive regulation of fibroblast proliferation;0.0269791160260302!GO:0008250;oligosaccharyl transferase complex;0.0270090392653537!GO:0006417;regulation of translation;0.0270090392653537!GO:0031123;RNA 3'-end processing;0.0270743659477398!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0270743659477398!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0271132582115027!GO:0004576;oligosaccharyl transferase activity;0.0272915775194311!GO:0045045;secretory pathway;0.0274102571687087!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0274973022197116!GO:0005774;vacuolar membrane;0.027764387253361!GO:0005732;small nucleolar ribonucleoprotein complex;0.0277672822573672!GO:0000077;DNA damage checkpoint;0.0278189619726601!GO:0006354;RNA elongation;0.0281778528670651!GO:0006213;pyrimidine nucleoside metabolic process;0.0282667171364865!GO:0008092;cytoskeletal protein binding;0.0282844290255874!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0284040090253326!GO:0010257;NADH dehydrogenase complex assembly;0.0284040090253326!GO:0033108;mitochondrial respiratory chain complex assembly;0.0284040090253326!GO:0005996;monosaccharide metabolic process;0.0285826132320128!GO:0048144;fibroblast proliferation;0.0288938786948337!GO:0048145;regulation of fibroblast proliferation;0.0288938786948337!GO:0004843;ubiquitin-specific protease activity;0.0290382195132792!GO:0006376;mRNA splice site selection;0.029056708131455!GO:0000389;nuclear mRNA 3'-splice site recognition;0.029056708131455!GO:0045926;negative regulation of growth;0.0294016487706862!GO:0006541;glutamine metabolic process;0.0294016487706862!GO:0000152;nuclear ubiquitin ligase complex;0.0294016487706862!GO:0031406;carboxylic acid binding;0.0296189515675677!GO:0022411;cellular component disassembly;0.0303701913095198!GO:0019318;hexose metabolic process;0.0305887366489754!GO:0007040;lysosome organization and biogenesis;0.0306672449040032!GO:0019206;nucleoside kinase activity;0.0310732244098297!GO:0035267;NuA4 histone acetyltransferase complex;0.0310732244098297!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0311474034358356!GO:0045936;negative regulation of phosphate metabolic process;0.0317904319157775!GO:0046128;purine ribonucleoside metabolic process;0.0321448698198598!GO:0042278;purine nucleoside metabolic process;0.0321448698198598!GO:0006644;phospholipid metabolic process;0.0324963737151933!GO:0050811;GABA receptor binding;0.0327718596772289!GO:0019320;hexose catabolic process;0.0331506351404389!GO:0005658;alpha DNA polymerase:primase complex;0.0341954172742716!GO:0051716;cellular response to stimulus;0.0341954172742716!GO:0030133;transport vesicle;0.0341954172742716!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0341954172742716!GO:0001836;release of cytochrome c from mitochondria;0.0345222351015746!GO:0004448;isocitrate dehydrogenase activity;0.0346302297756789!GO:0008536;Ran GTPase binding;0.0347775434574369!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0350755316815564!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0351003600377972!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0352439453432613!GO:0046519;sphingoid metabolic process;0.0359452371102871!GO:0030032;lamellipodium biogenesis;0.035992601759566!GO:0006739;NADP metabolic process;0.0365269414220483!GO:0006006;glucose metabolic process;0.036574195982087!GO:0051059;NF-kappaB binding;0.0368676252898837!GO:0009066;aspartate family amino acid metabolic process;0.0370835853486446!GO:0042364;water-soluble vitamin biosynthetic process;0.0370835853486446!GO:0004659;prenyltransferase activity;0.0370835853486446!GO:0046112;nucleobase biosynthetic process;0.0371411425044154!GO:0000910;cytokinesis;0.0373479665161023!GO:0019362;pyridine nucleotide metabolic process;0.0375293237872326!GO:0005784;translocon complex;0.0375293237872326!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0377209729608163!GO:0030503;regulation of cell redox homeostasis;0.0380576254549955!GO:0030036;actin cytoskeleton organization and biogenesis;0.0388353560675311!GO:0005971;ribonucleoside-diphosphate reductase complex;0.039701019028188!GO:0008017;microtubule binding;0.0412204426663483!GO:0031625;ubiquitin protein ligase binding;0.0417564820762097!GO:0016417;S-acyltransferase activity;0.0417585077337684!GO:0008203;cholesterol metabolic process;0.0419030524279927!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0419935213807116!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0421587855159067!GO:0040029;regulation of gene expression, epigenetic;0.0426155357417912!GO:0015036;disulfide oxidoreductase activity;0.0426155357417912!GO:0022406;membrane docking;0.0426155357417912!GO:0048278;vesicle docking;0.0426155357417912!GO:0030677;ribonuclease P complex;0.0426155357417912!GO:0009225;nucleotide-sugar metabolic process;0.0426155357417912!GO:0030134;ER to Golgi transport vesicle;0.042694769506364!GO:0012506;vesicle membrane;0.0436602244955854!GO:0042769;DNA damage response, detection of DNA damage;0.0438424635050455!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0439991716691307!GO:0008426;protein kinase C inhibitor activity;0.0440148481226332!GO:0031326;regulation of cellular biosynthetic process;0.0448610035978705!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0453324910279176!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0453324910279176!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0453324910279176!GO:0001522;pseudouridine synthesis;0.0454410610005365!GO:0006518;peptide metabolic process;0.045747480571335!GO:0030911;TPR domain binding;0.0458437139869535!GO:0006749;glutathione metabolic process;0.0464748177836602!GO:0030127;COPII vesicle coat;0.0464748177836602!GO:0012507;ER to Golgi transport vesicle membrane;0.0464748177836602!GO:0030027;lamellipodium;0.0465487720716893!GO:0031371;ubiquitin conjugating enzyme complex;0.0465876191393038!GO:0007033;vacuole organization and biogenesis;0.0466082314986146!GO:0007041;lysosomal transport;0.0468427223732418!GO:0006406;mRNA export from nucleus;0.0471320029284161!GO:0006783;heme biosynthetic process;0.0474537430853716!GO:0044450;microtubule organizing center part;0.0474553737499415!GO:0009081;branched chain family amino acid metabolic process;0.0478078974339831!GO:0008156;negative regulation of DNA replication;0.0483671050267025!GO:0044433;cytoplasmic vesicle part;0.0487608821766217!GO:0004221;ubiquitin thiolesterase activity;0.0497755585478712!GO:0005777;peroxisome;0.049811256294904!GO:0042579;microbody;0.049811256294904!GO:0006672;ceramide metabolic process;0.049811256294904!GO:0016791;phosphoric monoester hydrolase activity;0.0498697252523929!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0499140640634109!GO:0008287;protein serine/threonine phosphatase complex;0.0499140640634109
|sample_id=11899
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.72158721212;ESRRA:1.64770404203;E2F1..5:1.6231079105;HES1:1.60465568367;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.4666976892;FOXM1:1.40000279301;FOXQ1:1.2803589274;HIF1A:1.14550770919;ELK1,4_GABP{A,B1}:1.14324044337;PPARG:1.11853845804;NR5A1,2:1.06398333502;YY1:1.04179768819;NRF1:1.03127080121;NKX3-1:0.987503409874;bHLH_family:0.899521895975;MYB:0.832352490277;ZNF143:0.769161220287;NR6A1:0.741204774723;NFY{A,B,C}:0.715007066284;HNF4A_NR2F1,2:0.685350098374;FOXD3:0.682461588955;PAX1,9:0.677629225466;NKX3-2:0.67198622423;ZEB1:0.609706490827;PAX5:0.58538706244;TEAD1:0.572223940041;SNAI1..3:0.558806147909;HOX{A6,A7,B6,B7}:0.529537993417;FOXN1:0.507103475971;PAX8:0.505070468551;NFE2L1:0.500729582717;POU1F1:0.498833748448;GCM1,2:0.48308378261;EP300:0.475456893928;IRF7:0.451218548593;IKZF1:0.436853830732;ZNF148:0.432463598477;RXR{A,B,G}:0.419800336568;UFEwm:0.413664035448;TFDP1:0.409764921424;TBX4,5:0.36603869625;MYOD1:0.34195343743;GFI1:0.3214797642;HOXA9_MEIS1:0.309450353056;HOX{A5,B5}:0.282887844269;VSX1,2:0.226403854016;MYBL2:0.201160492565;GZF1:0.17676180696;ARID5B:0.149121627065;PAX3,7:0.133821525918;TEF:0.125740094894;GTF2A1,2:0.121121963199;ALX4:0.114347861247;TP53:0.109475884856;FOX{F1,F2,J1}:0.106638079159;PAX2:0.092505751791;RFX2..5_RFXANK_RFXAP:0.0875660068712;POU3F1..4:0.0804101010078;IKZF2:0.0790318405093;CUX2:0.0777188225919;BREu{core}:0.0715336619395;ZBTB16:0.0715195210255;LHX3,4:0.07094965123;STAT5{A,B}:0.0606819831682;LEF1_TCF7_TCF7L1,2:0.0582436000946;CREB1:0.0554996628126;ZNF423:0.04127562751;ZNF384:0.0149091703743;BACH2:-0.00804698626685;HLF:-0.0143703050143;EN1,2:-0.0175935342145;RORA:-0.0276127095395;SOX{8,9,10}:-0.0288896399013;MTF1:-0.0291027144979;HNF1A:-0.0301488694553;NFE2:-0.0303455692713;GFI1B:-0.0339958245895;HBP1_HMGB_SSRP1_UBTF:-0.0413654643954;FOXL1:-0.05218401235;PDX1:-0.0527586519685;HAND1,2:-0.0552136691553;ATF5_CREB3:-0.0909915807234;HSF1,2:-0.0925963772937;CDX1,2,4:-0.100599218539;CEBPA,B_DDIT3:-0.100901341178;NKX6-1,2:-0.109218763469;PRRX1,2:-0.11060483645;ZBTB6:-0.130271941537;LMO2:-0.13313447538;PITX1..3:-0.136162374473;FOS_FOS{B,L1}_JUN{B,D}:-0.137789005661;NFE2L2:-0.139943299185;OCT4_SOX2{dimer}:-0.156892357022;EBF1:-0.159862035414;GLI1..3:-0.1599718316;HOX{A4,D4}:-0.1797843695;TLX1..3_NFIC{dimer}:-0.191653037135;MEF2{A,B,C,D}:-0.193637282835;AHR_ARNT_ARNT2:-0.21019885236;FOX{I1,J2}:-0.217378500881;PBX1:-0.233604441314;POU2F1..3:-0.235657559538;ONECUT1,2:-0.240464681901;ATF4:-0.263621475571;CDC5L:-0.265928030179;STAT2,4,6:-0.268316913432;NR3C1:-0.285330352679;ELF1,2,4:-0.28978970138;KLF4:-0.295102329225;TBP:-0.30359143113;HMGA1,2:-0.305170571661;ESR1:-0.308548278654;TFCP2:-0.315279617635;HIC1:-0.318748146112;ZFP161:-0.320624471194;NKX2-1,4:-0.330121589786;DBP:-0.349190914459;FOSL2:-0.351681880897;PAX6:-0.352610278698;NFKB1_REL_RELA:-0.368251878922;CRX:-0.379113015535;ADNP_IRX_SIX_ZHX:-0.385427002597;NKX2-2,8:-0.386396550929;IRF1,2:-0.394489158549;ATF6:-0.399176305371;NFIL3:-0.411763106796;FOXP3:-0.413904850227;SREBF1,2:-0.416371488417;TFAP2B:-0.433996640416;BPTF:-0.449394660475;POU5F1:-0.469617524483;TFAP2{A,C}:-0.470644953743;MAFB:-0.472274624886;ALX1:-0.475935294976;NR1H4:-0.483470919545;GTF2I:-0.485659311756;T:-0.493330944594;SOX2:-0.50631103722;PAX4:-0.506918806412;EVI1:-0.512839479923;NANOG:-0.514976199735;JUN:-0.516744069519;RFX1:-0.521804991624;SPIB:-0.523149305372;GATA6:-0.533754038078;POU6F1:-0.553388281332;RXRA_VDR{dimer}:-0.562996491786;REST:-0.593868285508;NHLH1,2:-0.612495326056;RBPJ:-0.617012253604;MED-1{core}:-0.647960642444;EGR1..3:-0.65015887607;MTE{core}:-0.659215766593;AR:-0.668726167;FOXP1:-0.669419781189;XCPE1{core}:-0.675989984875;SP1:-0.687105043177;RUNX1..3:-0.690877110722;SPI1:-0.70481261659;SOX17:-0.708369746885;NKX2-3_NKX2-5:-0.754128614509;ZIC1..3:-0.75427304067;GATA4:-0.769480809532;ETS1,2:-0.783669094335;TFAP4:-0.792150924916;SRF:-0.796592744111;TOPORS:-0.822689965334;MAZ:-0.825257657135;SOX5:-0.867304296391;ZNF238:-0.871366269017;NFATC1..3:-0.931528437328;AIRE:-0.932219757827;FOXA2:-0.932614203854;DMAP1_NCOR{1,2}_SMARC:-0.945564501435;RREB1:-0.97038737301;FOX{D1,D2}:-0.98239752463;STAT1,3:-0.985218330289;TAL1_TCF{3,4,12}:-1.01191565793;MYFfamily:-1.01425884517;NFIX:-1.06174033504;ATF2:-1.0736100824;SMAD1..7,9:-1.07479952663;FOXO1,3,4:-1.15727731142;PRDM1:-1.1657641501;HMX1:-1.21201132525;MZF1:-1.22397863905;XBP1:-1.26645395596;TGIF1:-1.28139503548;PATZ1:-1.28256567644;SPZ1:-1.3160255846;TLX2:-1.33128001744;NANOG{mouse}:-1.63204599418
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11899-125E9;search_select_hide=table117:FF:11899-125E9
}}
}}

Latest revision as of 18:27, 4 June 2020

Name:Hep-2 cells mock treated, biol_rep2
Species:Human (Homo sapiens)
Library ID:CNhs13500
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age56
cell typeunclassifiable
cell lineHep-2
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number3b
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005404
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13500 CAGE DRX007783 DRR008655
Accession ID Hg19

Library idBAMCTSS
CNhs13500 DRZ000080 DRZ001465
Accession ID Hg38

Library idBAMCTSS
CNhs13500 DRZ011430 DRZ012815
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0107
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0.828
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.511
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.0677
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0269
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.186
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.133
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.00384
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.00345
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.126
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.731
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.42
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.814
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.422
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.582
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0.126
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0383
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13500

Jaspar motifP-value
MA0002.20.0478
MA0003.10.98
MA0004.10.13
MA0006.10.435
MA0007.10.152
MA0009.10.788
MA0014.10.752
MA0017.10.697
MA0018.20.94
MA0019.10.866
MA0024.17.48717e-9
MA0025.10.186
MA0027.10.79
MA0028.11.24733e-5
MA0029.10.737
MA0030.10.397
MA0031.10.187
MA0035.20.427
MA0038.10.952
MA0039.20.0291
MA0040.10.269
MA0041.10.342
MA0042.10.513
MA0043.10.0424
MA0046.10.417
MA0047.20.852
MA0048.10.0981
MA0050.10.0421
MA0051.10.62
MA0052.10.00441
MA0055.11.49238e-4
MA0057.10.174
MA0058.10.0761
MA0059.10.0201
MA0060.10.0425
MA0061.10.0195
MA0062.20.0122
MA0065.20.0246
MA0066.10.715
MA0067.10.274
MA0068.17.02036e-4
MA0069.10.333
MA0070.10.654
MA0071.10.0915
MA0072.10.717
MA0073.10.238
MA0074.10.887
MA0076.12.2518e-4
MA0077.10.819
MA0078.10.137
MA0079.20.381
MA0080.22.40031e-8
MA0081.10.279
MA0083.10.00156
MA0084.10.405
MA0087.10.551
MA0088.10.0143
MA0090.10.00188
MA0091.10.517
MA0092.10.964
MA0093.10.0792
MA0099.20.00759
MA0100.10.335
MA0101.10.0912
MA0102.20.787
MA0103.10.0252
MA0104.25.54243e-4
MA0105.10.289
MA0106.10.919
MA0107.10.0154
MA0108.20.298
MA0111.10.707
MA0112.20.0586
MA0113.10.865
MA0114.10.0195
MA0115.10.112
MA0116.10.658
MA0117.10.924
MA0119.10.874
MA0122.10.891
MA0124.10.808
MA0125.10.436
MA0131.10.238
MA0135.10.919
MA0136.13.62378e-4
MA0137.20.0266
MA0138.20.0998
MA0139.10.706
MA0140.10.734
MA0141.10.00713
MA0142.10.981
MA0143.10.113
MA0144.10.449
MA0145.10.935
MA0146.10.221
MA0147.13.71407e-4
MA0148.10.304
MA0149.10.0512
MA0150.10.4
MA0152.10.391
MA0153.10.0146
MA0154.10.495
MA0155.10.215
MA0156.10.0608
MA0157.10.128
MA0159.10.176
MA0160.10.0281
MA0162.10.274
MA0163.10.203
MA0164.10.203
MA0258.10.991
MA0259.10.0148



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13500

Novel motifP-value
10.148
100.07
1000.0292
1010.272
1020.865
1030.842
1040.769
1050.108
1060.00248
1070.0658
1080.709
1090.00277
110.957
1100.483
1110.619
1120.248
1130.00149
1140.941
1150.956
1160.528
1170.207
1180.143
1190.955
120.871
1200.0532
1210.608
1220.192
1230.121
1240.694
1250.765
1260.838
1270.2
1286.27223e-5
1290.281
131.65776e-4
1300.536
1310.538
1320.591
1330.213
1340.746
1350.107
1360.00446
1370.246
1380.842
1390.0607
140.395
1400.431
1410.23
1420.851
1430.212
1440.296
1450.252
1460.921
1470.822
1480.57
1490.537
150.826
1500.826
1510.511
1520.447
1530.71
1540.437
1550.512
1560.0375
1570.105
1580.149
1590.295
160.946
1600.483
1610.486
1620.827
1630.22
1640.0188
1650.784
1660.0759
1670.218
1680.235
1690.428
170.597
180.153
190.839
20.422
200.139
210.432
220.87
230.00365
240.571
250.36
260.977
270.74
280.844
290.0229
30.524
300.481
310.476
320.0743
330.189
340.192
350.75
360.172
370.653
380.815
390.818
40.242
400.0155
410.0746
420.915
430.312
440.0503
450.163
460.551
470.516
480.552
490.2
50.316
500.902
510.473
520.234
530.0665
540.364
550.0217
560.972
570.822
580.909
590.793
60.739
600.239
610.0643
620.886
630.615
640.759
650.371
660.53
670.855
680.565
690.942
70.0342
700.11
710.0551
720.795
730.562
740.0611
750.207
760.31
770.711
780.217
790.868
80.147
800.0355
810.328
820.1
830.981
840.295
850.0233
860.813
870.00797
880.8
890.703
90.596
900.0195
910.0184
920.0576
930.32
940.391
950.0429
960.46
970.836
980.731
990.359



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13500


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001737 (larynx)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000072 (segment of respiratory tract)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0001004 (respiratory system)
0001557 (upper respiratory tract)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000343 (control treatment sample)
0000350 (experimentally modified sample)
0104978 (HEp-2 cell sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0011132 (human Hep-2 cells mock treated sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

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