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(Created page with "{{f5samples |id=FF:11905-125F6 |name=immature langerhans cells, donor2 |sample_id=11905 |rna_tube_id= |rna_box=125 |rna_position=F6 |sample_cell_lot= |sample_cell_cata...")
 
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{{f5samples
{{f5samples
|id=FF:11905-125F6
|DRA_sample_Accession=CAGE@SAMD00005294
|name=immature langerhans cells, donor2
|accession_numbers=CAGE;DRX008544;DRR009416;DRZ000841;DRZ002226;DRZ012191;DRZ013576
|sample_id=11905
|ancestors_in_anatomy_facet=
|rna_tube_id=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000453,CL:0000840,CL:0001014,CL:0001016
|rna_box=125
|rna_position=F6
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=LC-II
|rna_catalog_number=
|sample_species=
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.51000
|rna_od260/280=2.07000
|sample_cell_type=langerhans cell
|sample_cell_line=
|sample_collaboration=Teunis Geijtenbeek
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=2.33590
|rna_concentration=0.23359
|sample_note=
|profile_hcage=CNhs13480,,,SEQUENCING QUEUE
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000451,CL:0000453,CL:0000548,CL:0000557,CL:0000566,CL:0000723,CL:0000738,CL:0000763,CL:0000837,CL:0000840,CL:0000988,CL:0000990,CL:0001012,CL:0001014,CL:0001016,CL:0001019,CL:0001029,CL:0002009,CL:0002031,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011135
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr19:45971246..45971265,+!p1@FOSB!2.47!5021.97!FOSB;;chr11:47400078..47400106,-!p1@SPI1!2.42!264.64!SPI1;;chr17:80797886..80797906,-!p1@ZNF750!2.32!206.61!ZNF750;;chr9:102584159..102584174,+!p2@NR4A3!2.29!342.02!NR4A3;;chr1:209979467..209979494,-!p1@IRF6!2.28!213.57!IRF6;;chr12:52445218..52445237,+!p1@NR4A1!2.17!1745.70!NR4A1;;chr1:25291475..25291511,-!p2@RUNX3!2.17!148.57!RUNX3;;chr18:77155922..77155939,+!p1@NFATC1!2.16!372.20!NFATC1;;chr2:157189180..157189290,-!p1@NR4A2!2.12!640.71!NR4A2;;chr16:85932760..85932775,+!p1@IRF8!2.12!130.77!IRF8;;chr4:57547454..57547469,-!p1@HOPX!2.05!111.43!HOPX;;chr12:72056800..72056834,+!p1@THAP2!2.04!143.15!THAP2;;chr19:36391434..36391450,-!p1@NFKBID!2.03!200.41!NFKBID;;chr11:47400062..47400077,-!p2@SPI1!1.97!92.08!SPI1;;chr11:65554528..65554546,+!p1@OVOL1!1.94!85.89!OVOL1;;chr15:60884706..60884743,-!p1@RORA!1.93!414.76!RORA;;chr9:102584262..102584276,+!p1@NR4A3!1.92!177.20!NR4A3;;chr2:68592406..68592424,+!p1@PLEK!1.91!79.70!PLEK;;chr17:7493405..7493419,-!p1@SOX15!1.91!79.70!SOX15;;chr11:34642612..34642646,+!p1@EHF!1.89!77.38!EHF;;chr1:209979411..209979433,-!p2@IRF6!1.88!74.28!IRF6;;chr8:22550982..22550999,-!p1@EGR3!1.87!196.55!EGR3;;chr19:54058073..54058088,+!p1@ZNF331!1.85!69.64!ZNF331;;chr11:65554563..65554576,+!p2@OVOL1!1.82!65.00!OVOL1;;chr22:38597987..38598021,+!p2@MAFF!1.80!359.82!MAFF;;chr14:35873947..35873965,-!p1@NFKBIA!1.78!3523.12!NFKBIA;;chr7:64342913..64342935,+!p2@ZNF273!1.75!55.71!ZNF273;;chr1:212782094..212782109,+!p1@ATF3!1.72!1317.78!ATF3;;chr14:75745523..75745537,+!p1@FOS!1.69!5406.55!FOS;;chr11:65668011..65668020,-!p3@FOSL1!1.69!47.98!FOSL1;;chr2:122042770..122042785,-!p1@TFCP2L1!1.67!45.65!TFCP2L1;;chr20:55204351..55204377,+!p1@TFAP2C!1.66!56.49!TFAP2C;;chr20:50159198..50159299,-!p1@NFATC2!1.64!61.90!NFATC2;;chr12:72056749..72056767,+!p6@THAP2!1.63!46.43!THAP2;;chr10:104154415..104154434,+!p5@NFKB2!1.63!41.79!NFKB2;;chr1:37940170..37940190,+!p1@ZC3H12A!1.61!461.96!ZC3H12A;;chr3:39195037..39195069,-!p2@CSRNP1!1.61!238.33!CSRNP1;;chr6:106534192..106534224,+!p1@PRDM1!1.61!109.11!PRDM1;;chr12:54785074..54785122,-!p2@ZNF385A!1.61!59.58!ZNF385A;;chr2:61108878..61108891,+!p5@REL!1.61!39.46!REL;;chr14:75746722..75746777,+!p2@FOS!1.60!48.75!FOS;;chr9:110252035..110252057,-!p1@KLF4!1.59!578.03!KLF4;;chr2:10091815..10091864,+!p1@GRHL1!1.59!49.52!GRHL1;;chr2:61108695..61108753,+!p1@REL!1.58!240.65!REL;;chr9:102584128..102584144,+!p3@NR4A3!1.57!68.09!NR4A3;;chr15:101069113..101069169,-!p1@CERS3!1.57!36.37!CERS3;;chr9:102584241..102584261,+!p4@NR4A3!1.56!53.39!NR4A3;;chr12:54785054..54785072,-!p4@ZNF385A!1.55!38.69!ZNF385A;;chr3:39195075..39195088,-!p1@CSRNP1!1.54!201.96!CSRNP1;;chr12:72056773..72056796,+!p3@THAP2!1.53!42.56!THAP2;;chr2:61108808..61108821,+!p3@REL!1.52!40.24!REL;;chr6:391743..391759,+!p1@IRF4!1.50!30.95!IRF4;;chr14:35872926..35872951,-!p4@NFKBIA!1.49!41.79!NFKBIA;;chr2:70142232..70142251,+!p1@MXD1!1.48!158.63!MXD1;;chr2:73520667..73520683,-!p1@EGR4!1.47!28.63!EGR4;;chr10:104155480..104155534,+!p2@NFKB2!1.46!173.33!NFKB2;;chr2:208394817..208394834,+!p3@CREB1!1.46!109.88!CREB1;;chr4:103422499..103422632,+!p1@NFKB1!1.45!540.11!NFKB1;;chr7:28725715..28725727,+!p3@CREB5!1.45!31.73!CREB5;;chr19:6110474..6110551,-!p1@RFX2!1.44!155.53!RFX2;;chr14:35872453..35872485,-!p2@NFKBIA!1.44!63.45!NFKBIA;;chr8:81397820..81397836,+!p2@ZBTB10!1.44!33.27!ZBTB10;;chr9:102584278..102584285,+!p5@NR4A3!1.44!26.31!NR4A3;;chr7:50344251..50344288,+!p3@IKZF1!1.42!25.54!IKZF1;;chr11:47400032..47400043,-!p5@SPI1!1.42!25.54!SPI1;;chr19:54041669..54041697,+!p2@ZNF331!1.40!23.99!ZNF331;;chr11:65686802..65686818,+!p6@DRAP1!1.39!40.24!DRAP1;;chr19:36389729..36389751,-!p3@NFKBID!1.38!23.21!NFKBID;;chrX:56258900..56258917,+!p4@KLF8!1.38!23.21!KLF8;;chr1:24646263..24646277,+!p4@GRHL3!1.37!22.44!GRHL3;;chr11:120110863..120110908,+!p2@POU2F3!1.37!22.44!POU2F3;;chr11:47399996..47400014,-!p4@SPI1!1.37!22.44!SPI1;;chr7:64342942..64342975,+!p5@ZNF273!1.36!21.67!ZNF273;;chr3:101546827..101546847,+!p2@NFKBIZ!1.35!30.18!NFKBIZ;;chr8:81397876..81397898,+!p5@ZBTB10!1.34!24.76!ZBTB10;;chr7:50344289..50344323,+!p1@IKZF1!1.34!20.89!IKZF1;;chr6:44233252..44233296,-!p1@NFKBIE!1.33!196.55!NFKBIE;;chr14:35872962..35873025,-!p3@NFKBIA!1.33!51.07!NFKBIA;;chr3:101568349..101568365,+!p1@NFKBIZ!1.32!988.92!NFKBIZ;;chr17:26833339..26833378,+!p1@FOXN1!1.32!20.12!FOXN1;;chr11:120107344..120107351,+!p1@POU2F3!1.31!23.21!POU2F3;;chr17:53342311..53342400,+!p1@HLF!1.31!22.44!HLF;;chr7:96654133..96654150,-!p1@DLX5!1.31!19.35!DLX5;;chr19:9732460..9732472,-!p2@ZNF561!1.31!19.35!ZNF561;;chr1:157108130..157108173,-!p1@ETV3!1.30!133.09!ETV3;;chr19:33793430..33793447,-!p1@CEBPA!1.30!78.93!CEBPA;;chr19:45252008..45252024,+!p2@BCL3!1.29!60.36!BCL3;;chr7:104654690..104654704,+!p2@MLL5!1.29!36.37!MLL5;;chr11:47399947..47399961,-!p3@SPI1!1.29!18.57!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!1.29!18.57!ZNF385A;;chr16:31885093..31885165,+!p1@ZNF267!1.28!265.41!ZNF267;;chr7:28725740..28725778,+!p1@CREB5!1.28!157.08!CREB5;;chr3:37218023..37218069,-!p3@LRRFIP2!1.27!27.86!LRRFIP2;;chr2:238600998..238601013,+!p5@LRRFIP1!1.27!17.80!LRRFIP1;;chr9:129567282..129567353,+!p1@ZBTB43!1.26!222.08!ZBTB43;;chr10:104155659..104155676,+!p4@NFKB2!1.26!21.67!NFKB2;;chr10:3827371..3827386,-!p2@KLF6!1.25!136.96!KLF6;;chr6:126240380..126240430,+!p2@NCOA7!1.24!42.56!NCOA7;;chr6:106534230..106534254,+!p2@PRDM1!1.24!41.01!PRDM1;;chr15:60884747..60884774,-!p3@RORA!1.24!39.46!RORA;;chr17:38256799..38256815,-!p3@NR1D1!1.24!29.40!NR1D1;;chr2:61108771..61108789,+!p4@REL!1.24!24.76!REL;;chrX:56258844..56258882,+!p1@KLF8!1.24!22.44!KLF8;;chr8:102218439..102218455,-!p3@ZNF706!1.24!16.25!ZNF706;;chr8:81397846..81397860,+!p3@ZBTB10!1.23!20.12!ZBTB10;;chr3:5022272..5022321,+!p7@BHLHE40!1.22!15.48!BHLHE40;;chr16:67881534..67881549,-!p4@CENPT!1.22!15.48!CENPT;;chr11:47400045..47400060,-!p6@SPI1!1.22!15.48!SPI1;;chr1:209979375..209979386,-!p4@IRF6!1.22!15.48!IRF6;;chr10:8096631..8096660,+!p1@GATA3!1.20!17.80!GATA3;;chr13:41593392..41593403,-!p7@ELF1!1.20!14.70!ELF1;;chr1:24645921..24645973,+!p2@GRHL3!1.20!14.70!GRHL3;;chr1:24645832..24645853,+!p1@GRHL3!1.17!13.93!GRHL3;;chr2:157189317..157189325,-!p8@NR4A2!1.17!13.93!NR4A2;;chr19:45504688..45504782,+!p1@RELB!1.16!81.25!RELB;;chr13:41635512..41635539,-!p2@ELF1!1.16!74.28!ELF1;;chr14:103059006..103059017,+!p2@RCOR1!1.16!20.89!RCOR1;;chr1:38512457..38512474,-!p1@POU3F1!1.16!14.70!POU3F1;;chr6:12011943..12012015,+!p2@HIVEP1!1.15!42.56!HIVEP1;;chr1:25256756..25256774,-!p1@RUNX3!1.15!24.76!RUNX3;;chr11:129245526..129245553,+!p1@BARX2!1.15!13.15!BARX2;;chrX:106960285..106960299,-!p1@TSC22D3!1.14!339.70!TSC22D3;;chr1:91487806..91487826,-!p5@ZNF644!1.14!22.44!ZNF644;;chr10:104154246..104154347,+!p3@NFKB2!1.13!75.83!NFKB2;;chr3:5021268..5021282,+!p4@BHLHE40!1.13!25.54!BHLHE40;;chrX:56258929..56258941,+!p7@KLF8!1.13!12.38!KLF8;;chr3:63897742..63897797,+!p2@ATXN7!1.12!41.01!ATXN7;;chr19:45250948..45250998,+!p3@BCL3!1.12!30.95!BCL3;;chr7:106809470..106809481,+!p2@HBP1!1.12!17.02!HBP1;;chr5:131826457..131826514,-!p1@IRF1!1.11!458.86!IRF1;;chr1:91487774..91487802,-!p2@ZNF644!1.11!31.73!ZNF644;;chr2:157199008..157199023,-!p3@NR4A2!1.11!24.76!NR4A2;;chr17:46620898..46620927,-!p9@HOXB2!1.11!13.93!HOXB2;;chr14:35872494..35872511,-!p5@NFKBIA!1.10!15.48!NFKBIA;;chr12:52448151..52448200,+!p8@NR4A1!1.10!11.61!NR4A1;;chr14:35872542..35872553,-!p10@NFKBIA!1.10!11.61!NFKBIA;;chr17:48072574..48072597,-!p1@DLX3!1.10!11.61!DLX3;;chr8:102504979..102505010,+!p2@GRHL2!1.10!11.61!GRHL2;;chr2:68592394..68592405,+!p2@PLEK!1.10!11.61!PLEK;;chr19:12902289..12902307,+!p1@JUNB!1.09!2613.13!JUNB;;chr10:3827389..3827408,-!p1@KLF6!1.09!858.15!KLF6;;chr10:35416142..35416169,+!p3@CREM!1.09!30.18!CREM;;chrX:84498989..84499003,+!p1@ZNF711!1.09!15.48!ZNF711;;chr2:8822176..8822196,+!p1@ID2!1.08!1563.85!ID2;;chr1:156470515..156470542,-!p2@MEF2D!1.08!58.04!MEF2D;;chr1:91487836..91487854,-!p3@ZNF644!1.08!25.54!ZNF644;;chr13:41593425..41593480,-!p1@ELF1!1.07!68.87!ELF1;;chr3:37217736..37217753,-!p2@LRRFIP2!1.07!45.65!LRRFIP2;;chr12:52448420..52448460,+!p5@NR4A1!1.07!10.83!NR4A1;;chr14:75747250..75747267,+!p5@FOS!1.07!10.83!FOS;;chr6:28048343..28048354,+!p1@ZNF165!1.07!10.83!ZNF165;;chr10:64576105..64576133,-!p1@EGR2!1.06!21.67!EGR2;;chr3:150126904..150126958,+!p7@TSC22D2!1.06!18.57!TSC22D2;;chr5:43121586..43121601,+!p10@ZNF131!1.05!11.61!ZNF131;;chr6:91006518..91006570,-!p1@BACH2!1.04!23.21!BACH2;;chr11:65430535..65430549,-!p4@RELA!1.04!11.61!RELA;;chr10:135121763..135121783,+!p5@ZNF511!1.04!10.06!ZNF511;;chr7:50343634..50343717,+!p2@IKZF1!1.04!10.06!IKZF1;;chr19:45972203..45972226,+!p5@FOSB!1.04!10.06!FOSB;;chr1:201979743..201979762,+!p1@ELF3!1.04!10.06!ELF3;;chr1:25256439..25256476,-!p3@RUNX3!1.04!10.06!RUNX3;;chr1:25291461..25291472,-!p11@RUNX3!1.04!10.06!RUNX3;;chr9:139294614..139294633,-!p@chr9:139294614..139294633,-!1.03!62.68!SNAPC4;;chr7:17338324..17338341,+!p3@AHR!1.03!33.27!AHR;;chr5:43121711..43121753,+!p2@ZNF131!1.03!28.63!ZNF131;;chr12:24715376..24715432,-!p1@SOX5!1.03!12.38!SOX5;;chr11:65667846..65667868,-!p1@FOSL1!1.02!253.03!FOSL1;;chr12:48298765..48298783,-!p2@VDR!1.02!20.12!VDR;;chr7:104654718..104654741,+!p3@MLL5!1.02!13.93!MLL5;;chr3:5021113..5021180,+!p1@BHLHE40!1.01!652.32!BHLHE40;;chr22:38598086..38598105,+!p1@MAFF!1.01!99.82!MAFF;;chr17:38498594..38498661,+!p2@RARA!1.01!31.73!RARA;;chr17:40429090..40429125,-!p3@STAT5B!1.01!9.29!STAT5B;;chr12:52448213..52448262,+!p6@NR4A1!1.01!9.29!NR4A1;;chr12:72056706..72056717,+!p10@THAP2!1.01!9.29!THAP2;;chr13:41593405..41593416,-!p9@ELF1!1.01!9.29!ELF1;;chr19:45251395..45251432,+!p8@BCL3!1.01!9.29!BCL3;;chr1:209979449..209979460,-!p3@IRF6!1.01!9.29!IRF6;;chr2:10091922..10091935,+!p3@GRHL1!1.01!9.29!GRHL1;;chr2:157186630..157186686,-!p6@NR4A2!1.01!9.29!NR4A2;;chr3:169490834..169490863,+!p4@MYNN!1.01!9.29!MYNN;;chr3:189507432..189507459,+!p1@TP63!1.01!9.29!TP63;;chr4:106066730..106066754,+!p6@TET2!1.01!9.29!TET2;;chr4:83822294..83822306,+!p8@THAP9!1.01!9.29!THAP9;;chr11:13299319..13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|ffid_belonging_in_development=CL:0000049,CL:0000134
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Line 67: Line 41:
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|id=FF:11905-125F6
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|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11905
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11905
|name=immature langerhans cells, donor2
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|rna_box=125
|rna_catalog_number=
|rna_concentration=0.23359
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=LC-II
|rna_od260/230=1.51
|rna_od260/280=2.07
|rna_position=F6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=125F6
|rna_weight_ug=2.3359
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=langerhans cell
|sample_collaboration=Teunis Geijtenbeek
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.78423799722737e-209!GO:0043226;organelle;1.53027242709634e-167!GO:0043229;intracellular organelle;7.75276497522518e-167!GO:0043227;membrane-bound organelle;4.90326985027799e-155!GO:0043231;intracellular membrane-bound organelle;6.63205919131291e-155!GO:0005737;cytoplasm;1.25519614206113e-150!GO:0044422;organelle part;3.61356341722686e-107!GO:0044446;intracellular organelle part;9.93654047540734e-106!GO:0044444;cytoplasmic part;6.11564563203561e-91!GO:0032991;macromolecular complex;3.66367125580467e-80!GO:0005515;protein binding;1.03923629046316e-79!GO:0044238;primary metabolic process;1.39388298055164e-78!GO:0044237;cellular metabolic process;6.06043677885097e-78!GO:0043170;macromolecule metabolic process;1.90386515708336e-76!GO:0005634;nucleus;8.83012174870743e-74!GO:0030529;ribonucleoprotein complex;1.79133658164408e-58!GO:0044428;nuclear part;1.77605157547662e-56!GO:0003723;RNA binding;2.21135600813409e-55!GO:0043283;biopolymer metabolic process;2.9189215721352e-52!GO:0043233;organelle lumen;1.25887977034718e-50!GO:0031974;membrane-enclosed lumen;1.25887977034718e-50!GO:0019538;protein metabolic process;1.6062720761709e-47!GO:0033036;macromolecule localization;5.34916714826109e-44!GO:0043234;protein complex;7.46669901283253e-44!GO:0015031;protein transport;6.93069629165797e-43!GO:0044267;cellular protein metabolic process;1.51395345511155e-42!GO:0044260;cellular macromolecule metabolic process;2.69749834882914e-41!GO:0016043;cellular component organization and biogenesis;6.81679477669248e-41!GO:0045184;establishment of protein localization;8.51739411506438e-41!GO:0008104;protein localization;3.87157842293886e-40!GO:0010467;gene expression;3.76608549713145e-39!GO:0031090;organelle membrane;2.50717838272884e-38!GO:0006396;RNA processing;8.0188160504649e-38!GO:0006412;translation;4.71685154573546e-37!GO:0031981;nuclear lumen;3.70772632557215e-36!GO:0005829;cytosol;7.16560844985481e-36!GO:0016071;mRNA metabolic process;7.29810377722374e-36!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.83016666085728e-35!GO:0005739;mitochondrion;5.6082719997941e-35!GO:0046907;intracellular transport;2.40580377732271e-32!GO:0065003;macromolecular complex assembly;9.64683880149811e-32!GO:0005840;ribosome;4.59196864878917e-31!GO:0006886;intracellular protein transport;3.02527645090431e-30!GO:0008380;RNA splicing;4.41851760104042e-30!GO:0006397;mRNA processing;1.28444849105821e-29!GO:0003735;structural constituent of ribosome;3.55845661660896e-28!GO:0043228;non-membrane-bound organelle;3.74326772599974e-28!GO:0043232;intracellular non-membrane-bound organelle;3.74326772599974e-28!GO:0031967;organelle envelope;3.94737490577485e-28!GO:0009058;biosynthetic process;6.43158187866819e-28!GO:0031975;envelope;7.97758122167511e-28!GO:0006996;organelle organization and biogenesis;8.62410001441044e-28!GO:0022607;cellular component assembly;1.84975146026948e-27!GO:0044249;cellular biosynthetic process;3.01884731668117e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.07282270744436e-27!GO:0033279;ribosomal subunit;9.32821243474253e-27!GO:0009059;macromolecule biosynthetic process;4.39013733674348e-26!GO:0044429;mitochondrial part;8.59562784425613e-26!GO:0000166;nucleotide binding;1.63692881832359e-24!GO:0044445;cytosolic part;2.18919799951032e-24!GO:0005654;nucleoplasm;6.3946211638249e-24!GO:0051649;establishment of cellular localization;1.00366214550052e-22!GO:0043412;biopolymer modification;1.04778638542277e-22!GO:0051641;cellular localization;3.13260709133888e-22!GO:0043687;post-translational protein modification;4.19995643376344e-22!GO:0005681;spliceosome;4.27406571857387e-22!GO:0006259;DNA metabolic process;1.5615901716739e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.46733897750304e-21!GO:0006464;protein modification process;1.00947968550006e-20!GO:0006915;apoptosis;2.11170693056331e-20!GO:0008219;cell death;2.43940666138277e-20!GO:0016265;death;2.43940666138277e-20!GO:0012501;programmed cell death;2.4799689712245e-20!GO:0008134;transcription factor binding;4.11143110761524e-20!GO:0006512;ubiquitin cycle;4.17100744748774e-20!GO:0003676;nucleic acid binding;4.65412522793234e-20!GO:0044451;nucleoplasm part;5.18800608224584e-20!GO:0016070;RNA metabolic process;7.95871632635395e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.4332250331841e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;3.54886358649306e-19!GO:0016462;pyrophosphatase activity;4.14645143168501e-19!GO:0017111;nucleoside-triphosphatase activity;8.31774606019479e-19!GO:0032553;ribonucleotide binding;8.49490243726459e-19!GO:0032555;purine ribonucleotide binding;8.49490243726459e-19!GO:0048770;pigment granule;8.83910961985485e-19!GO:0042470;melanosome;8.83910961985485e-19!GO:0044265;cellular macromolecule catabolic process;3.21710622779363e-18!GO:0005740;mitochondrial envelope;4.20882779562934e-18!GO:0017076;purine nucleotide binding;7.28286616485547e-18!GO:0007049;cell cycle;7.45791440069039e-18!GO:0019941;modification-dependent protein catabolic process;7.89048654825823e-18!GO:0043632;modification-dependent macromolecule catabolic process;7.89048654825823e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;8.52093911085983e-18!GO:0006511;ubiquitin-dependent protein catabolic process;9.73457327929343e-18!GO:0031966;mitochondrial membrane;1.34567328876293e-17!GO:0044257;cellular protein catabolic process;1.43046573726964e-17!GO:0016874;ligase activity;3.04175526419484e-17!GO:0006119;oxidative phosphorylation;1.14778766561064e-16!GO:0006605;protein targeting;2.14246806704601e-16!GO:0043285;biopolymer catabolic process;2.14331512187809e-16!GO:0006793;phosphorus metabolic process;2.18899367799841e-16!GO:0006796;phosphate metabolic process;2.18899367799841e-16!GO:0019866;organelle inner membrane;3.15580391432302e-16!GO:0005524;ATP binding;3.15580391432302e-16!GO:0032559;adenyl ribonucleotide binding;4.08793693123651e-16!GO:0012505;endomembrane system;1.08081188220501e-15!GO:0030554;adenyl nucleotide binding;4.50480271549115e-15!GO:0015934;large ribosomal subunit;2.0148263540055e-14!GO:0006913;nucleocytoplasmic transport;2.56529191805521e-14!GO:0005743;mitochondrial inner membrane;3.03752461344945e-14!GO:0044248;cellular catabolic process;3.23210003785997e-14!GO:0022618;protein-RNA complex assembly;3.81857064878858e-14!GO:0009057;macromolecule catabolic process;3.84513106945416e-14!GO:0051169;nuclear transport;4.56307568135497e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.071739490606e-14!GO:0030163;protein catabolic process;9.30408181505716e-14!GO:0016192;vesicle-mediated transport;1.02706527169018e-13!GO:0050794;regulation of cellular process;1.22857876280618e-13!GO:0048523;negative regulation of cellular process;1.41713236679103e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.01801290334782e-13!GO:0015935;small ribosomal subunit;3.3851699043213e-13!GO:0005730;nucleolus;3.63435948359357e-13!GO:0016310;phosphorylation;5.09317276391316e-13!GO:0051726;regulation of cell cycle;5.5252039860515e-13!GO:0008135;translation factor activity, nucleic acid binding;5.56972862341868e-13!GO:0042981;regulation of apoptosis;6.28256158369706e-13!GO:0000074;regulation of progression through cell cycle;6.56933302900223e-13!GO:0006366;transcription from RNA polymerase II promoter;7.43092310824055e-13!GO:0016604;nuclear body;8.91940672537223e-13!GO:0022402;cell cycle process;1.02330432058336e-12!GO:0044455;mitochondrial membrane part;1.1275352199948e-12!GO:0043067;regulation of programmed cell death;1.48128558408264e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.90178728415978e-12!GO:0048519;negative regulation of biological process;2.62394872074225e-12!GO:0005768;endosome;3.45481744502835e-12!GO:0006457;protein folding;3.72450198029325e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;6.71980749839603e-12!GO:0006974;response to DNA damage stimulus;9.68052152066142e-12!GO:0003712;transcription cofactor activity;1.1552812458499e-11!GO:0005794;Golgi apparatus;1.15738479057248e-11!GO:0008639;small protein conjugating enzyme activity;1.74326550264848e-11!GO:0016607;nuclear speck;2.03440040462746e-11!GO:0004842;ubiquitin-protein ligase activity;2.51121512582695e-11!GO:0006323;DNA packaging;2.84923908311443e-11!GO:0044453;nuclear membrane part;8.77988948185292e-11!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.54132720983281e-11!GO:0005635;nuclear envelope;1.33301086813497e-10!GO:0006461;protein complex assembly;1.47590967117518e-10!GO:0045786;negative regulation of progression through cell cycle;1.90293781420574e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.96411171455484e-10!GO:0031965;nuclear membrane;2.17319495323813e-10!GO:0005783;endoplasmic reticulum;2.18547077433862e-10!GO:0050657;nucleic acid transport;2.18547077433862e-10!GO:0051236;establishment of RNA localization;2.18547077433862e-10!GO:0050658;RNA transport;2.18547077433862e-10!GO:0003743;translation initiation factor activity;2.26235514931214e-10!GO:0042623;ATPase activity, coupled;2.49524895796674e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.85480294280196e-10!GO:0006403;RNA localization;3.04326560194064e-10!GO:0016887;ATPase activity;3.20134153867564e-10!GO:0019787;small conjugating protein ligase activity;3.34515083415285e-10!GO:0051276;chromosome organization and biogenesis;4.01012951923393e-10!GO:0031980;mitochondrial lumen;4.03141404690316e-10!GO:0005759;mitochondrial matrix;4.03141404690316e-10!GO:0005643;nuclear pore;7.08329427276772e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;7.87202818072904e-10!GO:0000375;RNA splicing, via transesterification reactions;7.87202818072904e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.87202818072904e-10!GO:0005746;mitochondrial respiratory chain;9.68720409995276e-10!GO:0050789;regulation of biological process;1.05038359992317e-09!GO:0006413;translational initiation;1.19665108253885e-09!GO:0051082;unfolded protein binding;1.23372551160991e-09!GO:0044432;endoplasmic reticulum part;1.43619376012214e-09!GO:0017038;protein import;1.83432073579415e-09!GO:0050136;NADH dehydrogenase (quinone) activity;1.86117956214181e-09!GO:0003954;NADH dehydrogenase activity;1.86117956214181e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.86117956214181e-09!GO:0007242;intracellular signaling cascade;2.25595289940339e-09!GO:0007243;protein kinase cascade;2.43174137947084e-09!GO:0006446;regulation of translational initiation;2.56498591907117e-09!GO:0048193;Golgi vesicle transport;2.62326423563108e-09!GO:0065004;protein-DNA complex assembly;3.01197148574425e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.93834954094116e-09!GO:0016564;transcription repressor activity;5.40806486556319e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.77119640286499e-09!GO:0031324;negative regulation of cellular metabolic process;8.00682756573449e-09!GO:0051028;mRNA transport;9.3086433325804e-09!GO:0006281;DNA repair;1.02774420629215e-08!GO:0007264;small GTPase mediated signal transduction;1.08981970130816e-08!GO:0065009;regulation of a molecular function;1.27472394829045e-08!GO:0006333;chromatin assembly or disassembly;1.30726364733295e-08!GO:0043069;negative regulation of programmed cell death;1.30726364733295e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.3466555917765e-08!GO:0043066;negative regulation of apoptosis;1.35830222070246e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.37792107909737e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.41509778851412e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.44864218578253e-08!GO:0009719;response to endogenous stimulus;1.492774623997e-08!GO:0005694;chromosome;1.51532858756589e-08!GO:0016881;acid-amino acid ligase activity;1.77209692741508e-08!GO:0019829;cation-transporting ATPase activity;1.97763237607745e-08!GO:0051246;regulation of protein metabolic process;2.28708134786602e-08!GO:0004386;helicase activity;2.72239927435863e-08!GO:0051186;cofactor metabolic process;3.35273998481465e-08!GO:0015986;ATP synthesis coupled proton transport;3.96326557625148e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.96326557625148e-08!GO:0009056;catabolic process;4.15402769732543e-08!GO:0008565;protein transporter activity;4.45381522566948e-08!GO:0042254;ribosome biogenesis and assembly;4.69682838835817e-08!GO:0016481;negative regulation of transcription;5.19294348849192e-08!GO:0042775;organelle ATP synthesis coupled electron transport;5.4663505263981e-08!GO:0042773;ATP synthesis coupled electron transport;5.4663505263981e-08!GO:0051170;nuclear import;5.97320183466759e-08!GO:0009892;negative regulation of metabolic process;6.58969847824097e-08!GO:0030964;NADH dehydrogenase complex (quinone);6.84291274368584e-08!GO:0045271;respiratory chain complex I;6.84291274368584e-08!GO:0005747;mitochondrial respiratory chain complex I;6.84291274368584e-08!GO:0003924;GTPase activity;6.92707624059726e-08!GO:0016567;protein ubiquitination;7.32425099080025e-08!GO:0006606;protein import into nucleus;7.74189550591404e-08!GO:0032446;protein modification by small protein conjugation;8.80623908119518e-08!GO:0046930;pore complex;1.0569952058102e-07!GO:0019222;regulation of metabolic process;1.06785001204662e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.10979769385579e-07!GO:0005773;vacuole;1.14666710330066e-07!GO:0000785;chromatin;1.25455010314601e-07!GO:0005789;endoplasmic reticulum membrane;1.49472294271458e-07!GO:0044427;chromosomal part;1.51687192534123e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.55501348743527e-07!GO:0044440;endosomal part;1.659008385523e-07!GO:0010008;endosome membrane;1.659008385523e-07!GO:0065002;intracellular protein transport across a membrane;1.8004675405634e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.89094093067476e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.91629845451246e-07!GO:0009260;ribonucleotide biosynthetic process;1.96378596392989e-07!GO:0006164;purine nucleotide biosynthetic process;2.29115500501107e-07!GO:0009259;ribonucleotide metabolic process;2.29356532840667e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.46666339409691e-07!GO:0008026;ATP-dependent helicase activity;2.51921819842223e-07!GO:0019899;enzyme binding;2.52696449453136e-07!GO:0006163;purine nucleotide metabolic process;3.62424826661229e-07!GO:0009142;nucleoside triphosphate biosynthetic process;3.86139528495166e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.86139528495166e-07!GO:0009150;purine ribonucleotide metabolic process;4.2948323355757e-07!GO:0016740;transferase activity;4.2948323355757e-07!GO:0003714;transcription corepressor activity;4.61208443632619e-07!GO:0048522;positive regulation of cellular process;5.46449564299792e-07!GO:0006732;coenzyme metabolic process;5.56221206269458e-07!GO:0006334;nucleosome assembly;5.58244639378313e-07!GO:0006916;anti-apoptosis;5.6652045293629e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.70652902402343e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.70652902402343e-07!GO:0006754;ATP biosynthetic process;6.37541410314348e-07!GO:0006753;nucleoside phosphate metabolic process;6.37541410314348e-07!GO:0005770;late endosome;6.41794323840429e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.97148880647805e-07!GO:0031497;chromatin assembly;8.27905619070226e-07!GO:0016568;chromatin modification;9.83622326822857e-07!GO:0030120;vesicle coat;1.0464556648728e-06!GO:0030662;coated vesicle membrane;1.0464556648728e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.14479162175042e-06!GO:0009141;nucleoside triphosphate metabolic process;1.39721184938886e-06!GO:0031982;vesicle;1.63762400572285e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.72175035825915e-06!GO:0000323;lytic vacuole;1.72175035825915e-06!GO:0005764;lysosome;1.72175035825915e-06!GO:0006260;DNA replication;1.75858260639854e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.84197052654641e-06!GO:0016787;hydrolase activity;2.00543235232063e-06!GO:0051168;nuclear export;2.01688863471745e-06!GO:0065007;biological regulation;2.17782017447775e-06!GO:0003713;transcription coactivator activity;2.1876976139616e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.29286490769935e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.48782792514518e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.48782792514518e-06!GO:0051188;cofactor biosynthetic process;2.62532957347443e-06!GO:0042802;identical protein binding;2.64130396686858e-06!GO:0009967;positive regulation of signal transduction;3.24000878861866e-06!GO:0048475;coated membrane;3.34434117725575e-06!GO:0030117;membrane coat;3.34434117725575e-06!GO:0031988;membrane-bound vesicle;3.76930076871978e-06!GO:0030695;GTPase regulator activity;4.2748158943238e-06!GO:0048468;cell development;4.32230385109586e-06!GO:0007265;Ras protein signal transduction;4.73705124017574e-06!GO:0046034;ATP metabolic process;4.73705124017574e-06!GO:0007005;mitochondrion organization and biogenesis;4.90420393880485e-06!GO:0005083;small GTPase regulator activity;5.00339727550345e-06!GO:0009055;electron carrier activity;5.8110200524006e-06!GO:0050790;regulation of catalytic activity;5.81913957721734e-06!GO:0009966;regulation of signal transduction;6.01177424885914e-06!GO:0006399;tRNA metabolic process;6.81753342305714e-06!GO:0048518;positive regulation of biological process;7.09750805736602e-06!GO:0031410;cytoplasmic vesicle;7.18096825745111e-06!GO:0005839;proteasome core complex (sensu Eukaryota);8.00417925990478e-06!GO:0016563;transcription activator activity;8.24137951809414e-06!GO:0016023;cytoplasmic membrane-bound vesicle;8.60934995983507e-06!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;1.01841686582721e-05!GO:0004674;protein serine/threonine kinase activity;1.07984819571078e-05!GO:0005793;ER-Golgi intermediate compartment;1.09233604385808e-05!GO:0051789;response to protein stimulus;1.09995888603622e-05!GO:0006986;response to unfolded protein;1.09995888603622e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.22103316439679e-05!GO:0000278;mitotic cell cycle;1.32322521847959e-05!GO:0043566;structure-specific DNA binding;1.39833846894648e-05!GO:0045892;negative regulation of transcription, DNA-dependent;1.51036996555512e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.7435151957343e-05!GO:0015399;primary active transmembrane transporter activity;1.7435151957343e-05!GO:0009108;coenzyme biosynthetic process;1.9369546539404e-05!GO:0009060;aerobic respiration;2.01630247862117e-05!GO:0031323;regulation of cellular metabolic process;2.2534300039674e-05!GO:0043065;positive regulation of apoptosis;2.37895454783541e-05!GO:0004298;threonine endopeptidase activity;2.46570088004523e-05!GO:0031252;leading edge;2.51954975753919e-05!GO:0003697;single-stranded DNA binding;2.71042072059145e-05!GO:0045259;proton-transporting ATP synthase complex;2.77314020632216e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.90286508736382e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.11190927502528e-05!GO:0006401;RNA catabolic process;3.18851036031767e-05!GO:0043068;positive regulation of programmed cell death;3.7090523988806e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.85485847317882e-05!GO:0006364;rRNA processing;3.92365642125221e-05!GO:0006402;mRNA catabolic process;3.99780485422796e-05!GO:0016301;kinase activity;4.1112976025055e-05!GO:0042613;MHC class II protein complex;4.14313699826966e-05!GO:0048471;perinuclear region of cytoplasm;4.48517673296871e-05!GO:0016072;rRNA metabolic process;4.51251537287672e-05!GO:0005525;GTP binding;6.26050142307728e-05!GO:0003724;RNA helicase activity;6.58256129482765e-05!GO:0008047;enzyme activator activity;6.92412627500681e-05!GO:0000151;ubiquitin ligase complex;7.23953343729005e-05!GO:0007050;cell cycle arrest;7.40287558909223e-05!GO:0005769;early endosome;8.32706754895239e-05!GO:0005667;transcription factor complex;8.62498190322737e-05!GO:0046983;protein dimerization activity;9.13528590505176e-05!GO:0016773;phosphotransferase activity, alcohol group as acceptor;9.40547217363994e-05!GO:0045333;cellular respiration;9.5941287335436e-05!GO:0006350;transcription;0.000104382455444106!GO:0030036;actin cytoskeleton organization and biogenesis;0.000107706802980969!GO:0051427;hormone receptor binding;0.000115137210429924!GO:0016779;nucleotidyltransferase activity;0.000122362129252668!GO:0044431;Golgi apparatus part;0.000125545043278101!GO:0005813;centrosome;0.000125545043278101!GO:0016197;endosome transport;0.000136537264479231!GO:0016044;membrane organization and biogenesis;0.000136751655264622!GO:0005798;Golgi-associated vesicle;0.000156908593834947!GO:0006613;cotranslational protein targeting to membrane;0.000157493957057116!GO:0043623;cellular protein complex assembly;0.000163762205561172!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000173455860560199!GO:0004812;aminoacyl-tRNA ligase activity;0.000173455860560199!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000173455860560199!GO:0006752;group transfer coenzyme metabolic process;0.000175585822374274!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000188086045243059!GO:0005761;mitochondrial ribosome;0.000189545409429537!GO:0000313;organellar ribosome;0.000189545409429537!GO:0015630;microtubule cytoskeleton;0.000196339033068524!GO:0008092;cytoskeletal protein binding;0.000196339033068524!GO:0035257;nuclear hormone receptor binding;0.00020110890004527!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000216407424645996!GO:0010468;regulation of gene expression;0.000230815744987948!GO:0043492;ATPase activity, coupled to movement of substances;0.00024312403687628!GO:0000786;nucleosome;0.0002566861279985!GO:0043038;amino acid activation;0.000259791550258281!GO:0006418;tRNA aminoacylation for protein translation;0.000259791550258281!GO:0043039;tRNA aminoacylation;0.000259791550258281!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00028800421581768!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000288967029214487!GO:0005774;vacuolar membrane;0.000300324198055489!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000300324198055489!GO:0005885;Arp2/3 protein complex;0.000309023944039233!GO:0006950;response to stress;0.000314760009371423!GO:0042611;MHC protein complex;0.000338776431383658!GO:0006099;tricarboxylic acid cycle;0.000359904500000536!GO:0046356;acetyl-CoA catabolic process;0.000359904500000536!GO:0006468;protein amino acid phosphorylation;0.000368287504764663!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00037685761786705!GO:0008654;phospholipid biosynthetic process;0.000384246910114708!GO:0016311;dephosphorylation;0.000397097405888874!GO:0008186;RNA-dependent ATPase activity;0.000411277196172534!GO:0003729;mRNA binding;0.000418315653045026!GO:0005815;microtubule organizing center;0.000432861462131131!GO:0045941;positive regulation of transcription;0.000452085037986329!GO:0019882;antigen processing and presentation;0.000455057425595476!GO:0030029;actin filament-based process;0.000597858596299799!GO:0009893;positive regulation of metabolic process;0.000599092364878905!GO:0000245;spliceosome assembly;0.00062509298241032!GO:0031902;late endosome membrane;0.000680665687618263!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000692979956283736!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000737342401676871!GO:0015631;tubulin binding;0.000753927790015915!GO:0006917;induction of apoptosis;0.000754193322926916!GO:0045893;positive regulation of transcription, DNA-dependent;0.000757131577681225!GO:0030658;transport vesicle membrane;0.000794279286544942!GO:0006417;regulation of translation;0.000795951781261463!GO:0001726;ruffle;0.000829949243216097!GO:0022403;cell cycle phase;0.000849292521394003!GO:0007266;Rho protein signal transduction;0.000933560236535891!GO:0044437;vacuolar part;0.000949547830082135!GO:0051056;regulation of small GTPase mediated signal transduction;0.00101011410670667!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00102569085798702!GO:0032561;guanyl ribonucleotide binding;0.00102569085798702!GO:0019001;guanyl nucleotide binding;0.00102569085798702!GO:0006084;acetyl-CoA metabolic process;0.00105426923429002!GO:0012502;induction of programmed cell death;0.00106664113931892!GO:0051338;regulation of transferase activity;0.00107955216582879!GO:0004004;ATP-dependent RNA helicase activity;0.00115288819739689!GO:0008017;microtubule binding;0.00123354491324472!GO:0008632;apoptotic program;0.00123942980399653!GO:0005765;lysosomal membrane;0.00136996300540488!GO:0019904;protein domain specific binding;0.00136996300540488!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00138774301923783!GO:0007010;cytoskeleton organization and biogenesis;0.00140550534608665!GO:0005096;GTPase activator activity;0.00140714472479584!GO:0006405;RNA export from nucleus;0.00158165214666565!GO:0030118;clathrin coat;0.00173216460180591!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00173426710613712!GO:0006611;protein export from nucleus;0.00178285789293799!GO:0032395;MHC class II receptor activity;0.00180858725776113!GO:0008234;cysteine-type peptidase activity;0.00182864143969121!GO:0030660;Golgi-associated vesicle membrane;0.00184658137134095!GO:0043549;regulation of kinase activity;0.00190141993821067!GO:0046578;regulation of Ras protein signal transduction;0.00194709537013377!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00200362128983689!GO:0009117;nucleotide metabolic process;0.00204733467260026!GO:0051329;interphase of mitotic cell cycle;0.00205147649060536!GO:0003690;double-stranded DNA binding;0.00212120972204912!GO:0006612;protein targeting to membrane;0.00216005638689616!GO:0009109;coenzyme catabolic process;0.00220733538470725!GO:0032774;RNA biosynthetic process;0.00220833105559615!GO:0005099;Ras GTPase activator activity;0.00220833105559615!GO:0045859;regulation of protein kinase activity;0.0022147597181628!GO:0051336;regulation of hydrolase activity;0.0022147597181628!GO:0006351;transcription, DNA-dependent;0.00230230986207383!GO:0008287;protein serine/threonine phosphatase complex;0.00235174670974693!GO:0043021;ribonucleoprotein binding;0.00235819056748971!GO:0006368;RNA elongation from RNA polymerase II promoter;0.00239498172343804!GO:0051187;cofactor catabolic process;0.00241386128016847!GO:0009889;regulation of biosynthetic process;0.00271244452870772!GO:0006897;endocytosis;0.00273803785892122!GO:0010324;membrane invagination;0.00273803785892122!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00278987309370661!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00278987309370661!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00278987309370661!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00290295674462725!GO:0016791;phosphoric monoester hydrolase activity;0.00291743504559196!GO:0016251;general RNA polymerase II transcription factor activity;0.00296439278949314!GO:0022890;inorganic cation transmembrane transporter activity;0.00303375899986783!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00315721579140833!GO:0008637;apoptotic mitochondrial changes;0.00317822556208174!GO:0051252;regulation of RNA metabolic process;0.00326545659385604!GO:0051059;NF-kappaB binding;0.00334421257932476!GO:0030125;clathrin vesicle coat;0.00336189656451969!GO:0030665;clathrin coated vesicle membrane;0.00336189656451969!GO:0017091;AU-rich element binding;0.00342156895153685!GO:0050779;RNA destabilization;0.00342156895153685!GO:0000289;poly(A) tail shortening;0.00342156895153685!GO:0007067;mitosis;0.00344541157055238!GO:0000087;M phase of mitotic cell cycle;0.00346445286952023!GO:0009165;nucleotide biosynthetic process;0.0034706928581434!GO:0000139;Golgi membrane;0.00358646743387845!GO:0005637;nuclear inner membrane;0.00362128271395809!GO:0031072;heat shock protein binding;0.0037457354747219!GO:0031326;regulation of cellular biosynthetic process;0.00396220546323794!GO:0031901;early endosome membrane;0.0042087965829594!GO:0006470;protein amino acid dephosphorylation;0.0042087965829594!GO:0003899;DNA-directed RNA polymerase activity;0.00422165014954512!GO:0006261;DNA-dependent DNA replication;0.00443186798782705!GO:0030384;phosphoinositide metabolic process;0.00444185313116744!GO:0045454;cell redox homeostasis;0.00450674978712025!GO:0004672;protein kinase activity;0.00459004744745978!GO:0015992;proton transport;0.00473629925047309!GO:0046822;regulation of nucleocytoplasmic transport;0.0047413515493192!GO:0030133;transport vesicle;0.00481913286456911!GO:0051301;cell division;0.00487740560989881!GO:0006414;translational elongation;0.00491114620045218!GO:0030119;AP-type membrane coat adaptor complex;0.00492613336350338!GO:0006352;transcription initiation;0.00499329112916351!GO:0005048;signal sequence binding;0.00503002037359861!GO:0008139;nuclear localization sequence binding;0.00512901189758581!GO:0006818;hydrogen transport;0.00534950890845857!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00550410566881375!GO:0005741;mitochondrial outer membrane;0.00568390116505076!GO:0051325;interphase;0.00600001611996892!GO:0005905;coated pit;0.00600001611996892!GO:0030659;cytoplasmic vesicle membrane;0.00600435423445915!GO:0006626;protein targeting to mitochondrion;0.00609849136529087!GO:0005085;guanyl-nucleotide exchange factor activity;0.00658785319282!GO:0030132;clathrin coat of coated pit;0.00671984978623589!GO:0008610;lipid biosynthetic process;0.00677526418846767!GO:0030258;lipid modification;0.00737867334310407!GO:0043022;ribosome binding;0.0075666035102968!GO:0045449;regulation of transcription;0.00760086361387447!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00783852258921475!GO:0030131;clathrin adaptor complex;0.0078483088883036!GO:0030433;ER-associated protein catabolic process;0.00812332022421666!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00812332022421666!GO:0051223;regulation of protein transport;0.00813848514684995!GO:0030176;integral to endoplasmic reticulum membrane;0.00813913745148976!GO:0031325;positive regulation of cellular metabolic process;0.00834259106292769!GO:0043488;regulation of mRNA stability;0.00838471367276265!GO:0043487;regulation of RNA stability;0.00838471367276265!GO:0033673;negative regulation of kinase activity;0.00853620201684593!GO:0006469;negative regulation of protein kinase activity;0.00853620201684593!GO:0030518;steroid hormone receptor signaling pathway;0.00859793753853962!GO:0001836;release of cytochrome c from mitochondria;0.00860092010941708!GO:0004860;protein kinase inhibitor activity;0.00860092010941708!GO:0006607;NLS-bearing substrate import into nucleus;0.00874643498976635!GO:0006650;glycerophospholipid metabolic process;0.00891083808185716!GO:0048500;signal recognition particle;0.00953651280999204!GO:0006643;membrane lipid metabolic process;0.00953651280999204!GO:0019867;outer membrane;0.00956725759259927!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00968748971095614!GO:0016363;nuclear matrix;0.00970450959902754!GO:0030127;COPII vesicle coat;0.00972421825536056!GO:0012507;ER to Golgi transport vesicle membrane;0.00972421825536056!GO:0006354;RNA elongation;0.00974892265680962!GO:0031625;ubiquitin protein ligase binding;0.00984141795352775!GO:0006891;intra-Golgi vesicle-mediated transport;0.0098550488432916!GO:0043087;regulation of GTPase activity;0.00998359438508624!GO:0004721;phosphoprotein phosphatase activity;0.0103921444531083!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.010400522848668!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0106241770207761!GO:0012506;vesicle membrane;0.0107006512081444!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0107360061531686!GO:0031968;organelle outer membrane;0.0108796993592817!GO:0005856;cytoskeleton;0.0113983135176152!GO:0008629;induction of apoptosis by intracellular signals;0.0114664368954156!GO:0051098;regulation of binding;0.0115143987600415!GO:0030031;cell projection biogenesis;0.011697144689505!GO:0006984;ER-nuclear signaling pathway;0.0119834936863684!GO:0005788;endoplasmic reticulum lumen;0.0121521485356901!GO:0046489;phosphoinositide biosynthetic process;0.012171588080412!GO:0030521;androgen receptor signaling pathway;0.0122222537848595!GO:0040029;regulation of gene expression, epigenetic;0.0128186248149562!GO:0006672;ceramide metabolic process;0.0129399062895896!GO:0051090;regulation of transcription factor activity;0.0130305474628327!GO:0051348;negative regulation of transferase activity;0.0133923815697899!GO:0018193;peptidyl-amino acid modification;0.0135822266592188!GO:0005149;interleukin-1 receptor binding;0.0137422401618277!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0144456613532723!GO:0045047;protein targeting to ER;0.0144456613532723!GO:0030139;endocytic vesicle;0.0149022226871698!GO:0003702;RNA polymerase II transcription factor activity;0.0149137864955886!GO:0030134;ER to Golgi transport vesicle;0.0149458084793425!GO:0005669;transcription factor TFIID complex;0.0152011982670958!GO:0022406;membrane docking;0.0153699840430071!GO:0048278;vesicle docking;0.0153699840430071!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0153699840430071!GO:0007006;mitochondrial membrane organization and biogenesis;0.015447241984642!GO:0051052;regulation of DNA metabolic process;0.0155269993570613!GO:0048487;beta-tubulin binding;0.0155269993570613!GO:0000279;M phase;0.0156649997318893!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0156732781211839!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0156732781211839!GO:0033116;ER-Golgi intermediate compartment membrane;0.0161985463881798!GO:0051101;regulation of DNA binding;0.0161985463881798!GO:0035258;steroid hormone receptor binding;0.0165807707701515!GO:0019783;small conjugating protein-specific protease activity;0.0166180463828332!GO:0008601;protein phosphatase type 2A regulator activity;0.0167935748683008!GO:0006839;mitochondrial transport;0.0168102849541615!GO:0016584;nucleosome positioning;0.0168251876878704!GO:0051092;activation of NF-kappaB transcription factor;0.0169469453405047!GO:0008033;tRNA processing;0.0172308887775084!GO:0007034;vacuolar transport;0.017269282216862!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0175723160571795!GO:0006644;phospholipid metabolic process;0.0183057461673118!GO:0005874;microtubule;0.0185986486936748!GO:0005684;U2-dependent spliceosome;0.0185986486936748!GO:0019843;rRNA binding;0.0187629024612156!GO:0046519;sphingoid metabolic process;0.0187727882467758!GO:0000209;protein polyubiquitination;0.0189996502631456!GO:0044433;cytoplasmic vesicle part;0.0191907771793635!GO:0019210;kinase inhibitor activity;0.0192928931943158!GO:0006904;vesicle docking during exocytosis;0.0192975348549565!GO:0000287;magnesium ion binding;0.0193730622399448!GO:0016859;cis-trans isomerase activity;0.0196358760823924!GO:0045746;negative regulation of Notch signaling pathway;0.0196932746728327!GO:0046467;membrane lipid biosynthetic process;0.0202245552994254!GO:0001889;liver development;0.021422017832917!GO:0003711;transcription elongation regulator activity;0.0215660291889783!GO:0000159;protein phosphatase type 2A complex;0.0219294254526613!GO:0046426;negative regulation of JAK-STAT cascade;0.0220667803237047!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0220667803237047!GO:0007040;lysosome organization and biogenesis;0.0228316607268517!GO:0000059;protein import into nucleus, docking;0.023167856686707!GO:0046474;glycerophospholipid biosynthetic process;0.0235942895934638!GO:0051087;chaperone binding;0.0236012892823791!GO:0043681;protein import into mitochondrion;0.0237189175001586!GO:0006091;generation of precursor metabolites and energy;0.0239514451721774!GO:0004843;ubiquitin-specific protease activity;0.0242038362239404!GO:0008312;7S RNA binding;0.0243463266806429!GO:0006355;regulation of transcription, DNA-dependent;0.024954663124932!GO:0043281;regulation of caspase activity;0.024954663124932!GO:0045045;secretory pathway;0.0249770084586501!GO:0051920;peroxiredoxin activity;0.0256532423519483!GO:0035023;regulation of Rho protein signal transduction;0.0258363458418641!GO:0004576;oligosaccharyl transferase activity;0.0260100584219795!GO:0019220;regulation of phosphate metabolic process;0.0268321343717206!GO:0051174;regulation of phosphorus metabolic process;0.0268321343717206!GO:0008250;oligosaccharyl transferase complex;0.0269685223258474!GO:0031647;regulation of protein stability;0.0271096479645364!GO:0000118;histone deacetylase complex;0.0272184577061718!GO:0044438;microbody part;0.0276373768625659!GO:0044439;peroxisomal part;0.0276373768625659!GO:0007041;lysosomal transport;0.0276373768625659!GO:0046966;thyroid hormone receptor binding;0.0282782581022557!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0282850449706501!GO:0030140;trans-Golgi network transport vesicle;0.0284320828691137!GO:0006516;glycoprotein catabolic process;0.0284712671932732!GO:0030674;protein binding, bridging;0.0292926066153549!GO:0046128;purine ribonucleoside metabolic process;0.0293833792292115!GO:0042278;purine nucleoside metabolic process;0.0293833792292115!GO:0005869;dynactin complex;0.0300635105802671!GO:0004221;ubiquitin thiolesterase activity;0.0312904075842894!GO:0016853;isomerase activity;0.0312904075842894!GO:0008022;protein C-terminus binding;0.0336845510687063!GO:0046979;TAP2 binding;0.0336845510687063!GO:0046977;TAP binding;0.0336845510687063!GO:0046978;TAP1 binding;0.0336845510687063!GO:0009116;nucleoside metabolic process;0.0346057507418167!GO:0051023;regulation of immunoglobulin secretion;0.0358513663800056!GO:0045994;positive regulation of translational initiation by iron;0.0358513663800056!GO:0032940;secretion by cell;0.0362672798797082!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0363377772139326!GO:0015923;mannosidase activity;0.0367411348586937!GO:0007033;vacuole organization and biogenesis;0.0368978565744678!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0369109849763703!GO:0003746;translation elongation factor activity;0.0375837492244632!GO:0016790;thiolester hydrolase activity;0.038211820214341!GO:0030968;unfolded protein response;0.0385746643054864!GO:0008159;positive transcription elongation factor activity;0.0386038843646115!GO:0031903;microbody membrane;0.03904046670972!GO:0005778;peroxisomal membrane;0.03904046670972!GO:0032318;regulation of Ras GTPase activity;0.0399864374641701!GO:0044452;nucleolar part;0.0404565211071127!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0411188473683341!GO:0008538;proteasome activator activity;0.0411492021172125!GO:0006144;purine base metabolic process;0.0416228022134545!GO:0030503;regulation of cell redox homeostasis;0.0427954901363163!GO:0016126;sterol biosynthetic process;0.042816028340005!GO:0000776;kinetochore;0.042937898473067!GO:0008320;protein transmembrane transporter activity;0.042992060579006!GO:0006979;response to oxidative stress;0.0433349975369626!GO:0006661;phosphatidylinositol biosynthetic process;0.0433385876313473!GO:0046456;icosanoid biosynthetic process;0.0438289195089947!GO:0019318;hexose metabolic process;0.0441718400042876!GO:0006406;mRNA export from nucleus;0.0449047142994911!GO:0030041;actin filament polymerization;0.0449497078175627!GO:0000303;response to superoxide;0.0450192145985047!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.045950258922424!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0475008431012542!GO:0005762;mitochondrial large ribosomal subunit;0.0475198673205648!GO:0000315;organellar large ribosomal subunit;0.0475198673205648!GO:0051091;positive regulation of transcription factor activity;0.0488815109989592!GO:0005657;replication fork;0.0494743530645561!GO:0018196;peptidyl-asparagine modification;0.0495810640002277!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0495810640002277!GO:0000082;G1/S transition of mitotic cell cycle;0.0495810640002277!GO:0008426;protein kinase C inhibitor activity;0.0497225906564574
|sample_id=11905
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11905-125F6;search_select_hide=table117:FF:11905-125F6
}}
}}

Latest revision as of 18:28, 4 June 2020

Name:immature langerhans cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13480
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexNA
ageNA
cell typelangerhans cell
cell lineNA
companyNA
collaborationTeunis Geijtenbeek
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberLC-II
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005294
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13480 CAGE DRX008544 DRR009416
Accession ID Hg19

Library idBAMCTSS
CNhs13480 DRZ000841 DRZ002226
Accession ID Hg38

Library idBAMCTSS
CNhs13480 DRZ012191 DRZ013576
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.174
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.179
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD341.37
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.406
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.204
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.521
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.249
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.42
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.405
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.314
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage1.256
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.346
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0.159
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.406
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.489
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.406
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.218
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.301
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.521
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.804
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.249
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.738
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.687
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.598
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.651
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.208
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.671
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.08
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.249
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.249
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.128
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.406
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0.807
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.249
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13480

Jaspar motifP-value
MA0002.20.127
MA0003.10.149
MA0004.10.631
MA0006.10.571
MA0007.10.433
MA0009.10.237
MA0014.10.102
MA0017.10.0273
MA0018.21.28226e-15
MA0019.10.801
MA0024.10.778
MA0025.14.0164e-6
MA0027.10.831
MA0028.10.567
MA0029.10.728
MA0030.10.0121
MA0031.10.616
MA0035.20.504
MA0038.10.831
MA0039.21.40449e-4
MA0040.10.853
MA0041.10.492
MA0042.10.449
MA0043.13.4008e-12
MA0046.10.369
MA0047.20.329
MA0048.10.213
MA0050.10.721
MA0051.10.755
MA0052.11.73943e-6
MA0055.10.0111
MA0057.10.378
MA0058.10.424
MA0059.10.986
MA0060.10.512
MA0061.11.84304e-29
MA0062.20.0315
MA0065.20.199
MA0066.10.146
MA0067.13.67433e-9
MA0068.10.134
MA0069.10.263
MA0070.10.402
MA0071.10.496
MA0072.10.591
MA0073.10.382
MA0074.10.763
MA0076.10.536
MA0077.10.543
MA0078.10.237
MA0079.20.0823
MA0080.24.72138e-11
MA0081.10.00399
MA0083.10.112
MA0084.10.986
MA0087.10.216
MA0088.10.00924
MA0090.10.0431
MA0091.10.199
MA0092.10.69
MA0093.10.624
MA0099.22.23769e-24
MA0100.10.392
MA0101.18.77563e-32
MA0102.20.00812
MA0103.10.732
MA0104.20.55
MA0105.18.71082e-12
MA0106.10.737
MA0107.13.95704e-33
MA0108.21.20646e-4
MA0111.10.588
MA0112.20.644
MA0113.10.936
MA0114.10.0496
MA0115.10.227
MA0116.10.603
MA0117.17.84658e-4
MA0119.10.0615
MA0122.10.919
MA0124.10.168
MA0125.10.481
MA0131.10.179
MA0135.10.0278
MA0136.13.0578e-11
MA0137.20.99
MA0138.20.058
MA0139.10.0288
MA0140.10.0986
MA0141.10.112
MA0142.10.591
MA0143.10.145
MA0144.10.863
MA0145.10.963
MA0146.10.601
MA0147.10.62
MA0148.10.213
MA0149.10.432
MA0150.12.32999e-5
MA0152.10.759
MA0153.10.0208
MA0154.10.601
MA0155.10.0243
MA0156.10.00484
MA0157.10.716
MA0159.10.214
MA0160.10.778
MA0162.10.0922
MA0163.10.148
MA0164.10.782
MA0258.10.713
MA0259.10.75



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13480

Novel motifP-value
10.918
100.492
1000.944
1010.0877
1020.425
1030.757
1040.838
1050.213
1060.00378
1070.987
1080.786
1090.574
110.527
1100.938
1110.403
1120.371
1130.744
1140.258
1150.238
1160.244
1170.15
1180.312
1190.367
120.132
1200.662
1210.282
1220.226
1230.588
1240.00245
1250.661
1260.107
1270.951
1280.905
1290.334
130.0103
1300.645
1310.369
1320.144
1330.124
1340.637
1350.039
1360.0349
1370.139
1380.499
1390.416
140.89
1400.723
1410.838
1420.99
1430.339
1440.257
1450.303
1460.751
1470.278
1480.302
1490.182
150.827
1500.657
1510.684
1520.0407
1530.506
1540.585
1550.184
1560.722
1570.533
1580.773
1590.0603
160.399
1600.0439
1610.252
1620.132
1630.0497
1640.178
1650.201
1660.273
1670.301
1680.163
1690.937
170.636
180.363
190.0179
20.105
200.0609
210.154
220.584
230.845
240.418
250.781
260.827
270.0419
280.548
290.23
30.862
300.927
310.417
324.71566e-4
330.123
340.48
350.321
360.511
370.597
380.864
390.874
40.781
400.459
410.721
420.966
430.992
440.337
450.828
460.631
470.766
480.595
490.4
50.969
500.826
510.92
520.346
530.988
540.758
550.583
560.514
570.354
580.686
590.56
60.942
600.362
610.504
620.841
630.989
640.426
650.991
660.558
670.742
680.71
690.0773
70.689
700.587
710.594
720.182
730.0706
740.0106
750.493
760.452
770.235
780.0645
790.102
80.0945
800.927
810.434
820.128
830.689
840.0185
850.742
860.187
870.0879
880.268
890.0851
90.857
900.761
910.948
920.12
930.41
940.819
950.112
960.983
970.433
980.763
993.01782e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13480


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000990 (conventional dendritic cell)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000453 (Langerhans cell)
0000840 (immature conventional dendritic cell)
0001014 (CD1a-positive Langerhans cell)
0001016 (immature CD1a-positive Langerhans cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011135 (human immature langerhans cells sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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