FF:12186-129A8: Difference between revisions

Latest revision as of 18:33, 4 June 2020

Name:	CD8+ T Cells (pluriselect), donor090309, donation1
Species:	Human (Homo sapiens)
Library ID:	CNhs12176,RDhi10014
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	NA
age	NA
cell type	T cell, CD8+
cell line	NA
company	NA
collaboration	Matched_genome_OSC(contact:Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00013687

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12176		CAGE		DRX008064		DRR008936
RDhi10014		RNA-Seq		DRX012347		DRR013795

Accession ID Hg19

Library id		BAM		CTSS
CNhs12176		DRZ000361		DRZ001746
RDhi10014		DRZ002996

Accession ID Hg38

Library id		BAM		CTSS
CNhs12176		DRZ011711		DRZ013096
RDhi10014

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0.12
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.155
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.242
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0106
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.12
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.00153
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.449
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.316
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.868
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.446
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.225
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.12
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.375
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0.214
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.464
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.0379
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.502
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.102
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.023
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.375
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.186
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.622
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.149
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.532
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.168
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.12
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.214
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.12
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.464
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.962
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.762
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12176

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	3.18073e-9
MA0003.1	MA0003.1	0.757
MA0004.1	MA0004.1	0.763
MA0006.1	MA0006.1	0.401
MA0007.1	MA0007.1	0.935
MA0009.1	MA0009.1	0.388
MA0014.1	MA0014.1	0.803
MA0017.1	MA0017.1	0.0335
MA0018.2	MA0018.2	0.746
MA0019.1	MA0019.1	0.69
MA0024.1	MA0024.1	0.396
MA0025.1	MA0025.1	0.789
MA0027.1	MA0027.1	0.95
MA0028.1	MA0028.1	1.75598e-6
MA0029.1	MA0029.1	0.68
MA0030.1	MA0030.1	0.144
MA0031.1	MA0031.1	0.00266
MA0035.2	MA0035.2	0.143
MA0038.1	MA0038.1	0.11
MA0039.2	MA0039.2	0.946
MA0040.1	MA0040.1	0.937
MA0041.1	MA0041.1	0.661
MA0042.1	MA0042.1	0.868
MA0043.1	MA0043.1	0.282
MA0046.1	MA0046.1	0.985
MA0047.2	MA0047.2	0.1
MA0048.1	MA0048.1	0.424
MA0050.1	MA0050.1	1.04257e-7
MA0051.1	MA0051.1	8.44592e-4
MA0052.1	MA0052.1	0.0093
MA0055.1	MA0055.1	0.763
MA0057.1	MA0057.1	0.581
MA0058.1	MA0058.1	0.587
MA0059.1	MA0059.1	0.378
MA0060.1	MA0060.1	0.124
MA0061.1	MA0061.1	0.0041
MA0062.2	MA0062.2	5.44632e-21
MA0065.2	MA0065.2	0.0416
MA0066.1	MA0066.1	0.281
MA0067.1	MA0067.1	0.803
MA0068.1	MA0068.1	0.523
MA0069.1	MA0069.1	0.861
MA0070.1	MA0070.1	0.615
MA0071.1	MA0071.1	0.61
MA0072.1	MA0072.1	0.278
MA0073.1	MA0073.1	0.825
MA0074.1	MA0074.1	0.588
MA0076.1	MA0076.1	3.49033e-10
MA0077.1	MA0077.1	0.0595
MA0078.1	MA0078.1	0.765
MA0079.2	MA0079.2	0.457
MA0080.2	MA0080.2	1.70467e-13
MA0081.1	MA0081.1	0.00694
MA0083.1	MA0083.1	0.0241
MA0084.1	MA0084.1	0.577
MA0087.1	MA0087.1	0.921
MA0088.1	MA0088.1	0.0444
MA0090.1	MA0090.1	1.34818e-4
MA0091.1	MA0091.1	0.754
MA0092.1	MA0092.1	0.985
MA0093.1	MA0093.1	0.828
MA0099.2	MA0099.2	0.0033
MA0100.1	MA0100.1	0.352
MA0101.1	MA0101.1	0.714
MA0102.2	MA0102.2	0.913
MA0103.1	MA0103.1	0.11
MA0104.2	MA0104.2	0.127
MA0105.1	MA0105.1	1.52569e-5
MA0106.1	MA0106.1	0.193
MA0107.1	MA0107.1	0.948
MA0108.2	MA0108.2	1.01887e-10
MA0111.1	MA0111.1	0.167
MA0112.2	MA0112.2	0.254
MA0113.1	MA0113.1	0.385
MA0114.1	MA0114.1	0.24
MA0115.1	MA0115.1	0.966
MA0116.1	MA0116.1	4.77327e-5
MA0117.1	MA0117.1	0.669
MA0119.1	MA0119.1	0.578
MA0122.1	MA0122.1	0.145
MA0124.1	MA0124.1	0.668
MA0125.1	MA0125.1	0.32
MA0131.1	MA0131.1	0.334
MA0135.1	MA0135.1	0.803
MA0136.1	MA0136.1	1.10153e-26
MA0137.2	MA0137.2	0.0127
MA0138.2	MA0138.2	0.622
MA0139.1	MA0139.1	0.00836
MA0140.1	MA0140.1	0.161
MA0141.1	MA0141.1	0.972
MA0142.1	MA0142.1	0.148
MA0143.1	MA0143.1	0.196
MA0144.1	MA0144.1	0.14
MA0145.1	MA0145.1	0.69
MA0146.1	MA0146.1	0.361
MA0147.1	MA0147.1	0.129
MA0148.1	MA0148.1	0.27
MA0149.1	MA0149.1	0.227
MA0150.1	MA0150.1	0.325
MA0152.1	MA0152.1	0.0208
MA0153.1	MA0153.1	0.432
MA0154.1	MA0154.1	0.0118
MA0155.1	MA0155.1	0.739
MA0156.1	MA0156.1	2.73653e-27
MA0157.1	MA0157.1	0.0019
MA0159.1	MA0159.1	0.15
MA0160.1	MA0160.1	0.46
MA0162.1	MA0162.1	0.821
MA0163.1	MA0163.1	1.35021e-10
MA0164.1	MA0164.1	0.451
MA0258.1	MA0258.1	0.312
MA0259.1	MA0259.1	0.41

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12176

Novel motif	Logo	P-value
1	1	0.234
10	10	0.0201
100	100	0.982
101	101	0.317
102	102	0.71
103	103	0.261
104	104	0.382
105	105	0.0738
106	106	0.902
107	107	0.0976
108	108	0.708
109	109	0.05
11	11	0.0902
110	110	0.383
111	111	0.45
112	112	0.35
113	113	0.213
114	114	0.229
115	115	0.204
116	116	0.757
117	117	0.00487
118	118	0.405
119	119	0.574
12	12	0.587
120	120	0.619
121	121	0.963
122	122	0.258
123	123	0.0498
124	124	0.157
125	125	0.943
126	126	0.267
127	127	0.589
128	128	0.949
129	129	0.534
13	13	0.541
130	130	0.697
131	131	0.648
132	132	0.804
133	133	0.577
134	134	0.952
135	135	0.385
136	136	0.964
137	137	0.137
138	138	0.389
139	139	0.0136
14	14	0.32
140	140	0.0806
141	141	0.732
142	142	0.383
143	143	5.59235e-5
144	144	0.925
145	145	0.306
146	146	0.129
147	147	0.0462
148	148	0.144
149	149	0.767
15	15	0.0768
150	150	0.758
151	151	0.224
152	152	0.384
153	153	0.751
154	154	0.945
155	155	0.029
156	156	0.707
157	157	0.307
158	158	0.228
159	159	0.0802
16	16	0.821
160	160	0.743
161	161	0.346
162	162	0.303
163	163	0.93
164	164	0.249
165	165	0.643
166	166	0.4
167	167	0.291
168	168	0.192
169	169	0.91
17	17	0.914
18	18	0.773
19	19	0.307
2	2	0.767
20	20	0.965
21	21	0.45
22	22	0.974
23	23	0.64
24	24	0.603
25	25	0.0418
26	26	0.349
27	27	0.0407
28	28	0.363
29	29	0.0754
3	3	0.0357
30	30	0.471
31	31	0.91
32	32	0.118
33	33	0.467
34	34	0.947
35	35	0.101
36	36	0.0291
37	37	0.207
38	38	0.594
39	39	0.398
4	4	0.8
40	40	0.57
41	41	0.187
42	42	0.0455
43	43	0.246
44	44	0.575
45	45	0.806
46	46	0.15
47	47	0.066
48	48	0.147
49	49	0.14
5	5	0.171
50	50	0.523
51	51	0.564
52	52	0.252
53	53	0.205
54	54	0.562
55	55	0.22
56	56	0.505
57	57	0.555
58	58	0.0497
59	59	0.479
6	6	0.881
60	60	0.382
61	61	0.0819
62	62	0.023
63	63	0.773
64	64	0.224
65	65	0.767
66	66	0.706
67	67	0.957
68	68	0.656
69	69	0.892
7	7	0.176
70	70	0.0106
71	71	0.13
72	72	0.0652
73	73	0.673
74	74	0.673
75	75	0.0145
76	76	0.185
77	77	0.415
78	78	0.0863
79	79	0.199
8	8	0.982
80	80	9.17574e-4
81	81	0.31
82	82	0.0987
83	83	0.966
84	84	0.345
85	85	0.687
86	86	0.184
87	87	0.671
88	88	0.869
89	89	0.824
9	9	0.489
90	90	0.0165
91	91	0.952
92	92	0.398
93	93	0.279
94	94	0.0938
95	95	0.0105
96	96	0.221
97	97	0.381
98	98	0.135
99	99	0.0876

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12176

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
+|DRA_sample_Accession=RNA-Seq@SAMD00013687
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000625,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000827,CL:0000837,CL:0000838,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420
+|accession_numbers=CAGE;DRX008064;DRR008936;DRZ000361;DRZ001746;DRZ011711;DRZ013096!RNA-Seq;DRX012347;DRR013795;DRZ002996;
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.06!114.68!TCF7;;chr3:27763807..27763822,-!p1@EOMES!1.84!67.85!EOMES;;chr3:63953435..63953499,+!p1@ATXN7!1.81!63.08!ATXN7;;chr2:192015701..192015743,-!p1@STAT4!1.79!81.23!STAT4;;chr7:50343634..50343717,+!p2@IKZF1!1.78!59.57!IKZF1;;chr2:68592406..68592424,+!p1@PLEK!1.77!57.34!PLEK;;chr4:109087445..109087463,-!p1@LEF1!1.70!49.38!LEF1;;chr17:45810594..45810608,+!p1@TBX21!1.69!47.78!TBX21;;chr9:117150254..117150271,-!p1@AKNA!1.66!117.87!AKNA;;chr5:133450365..133450444,+!p1@TCF7!1.65!190.82!TCF7;;chr1:25256756..25256774,-!p1@RUNX3!1.62!74.23!RUNX3;;chr17:37934365..37934387,-!p2@IKZF3!1.59!37.91!IKZF3;;chr2:231090433..231090469,+!p1@SP140!1.59!37.91!SP140;;chr2:192015750..192015793,-!p2@STAT4!1.58!49.06!STAT4;;chr19:16435625..16435682,+!p1@KLF2!1.50!933.72!KLF2;;chr5:133451347..133451358,+!p3@TCF7!1.48!29.31!TCF7;;chr19:19779619..19779670,+!p1@ZNF101!1.47!77.73!ZNF101;;chr14:75988771..75988826,+!p1@BATF!1.45!35.68!BATF;;chr4:109090075..109090095,-!p2@LEF1!1.43!25.80!LEF1;;chr20:50159198..50159299,-!p1@NFATC2!1.42!36.64!NFATC2;;chr2:68592394..68592405,+!p2@PLEK!1.41!24.53!PLEK;;chr7:50344251..50344288,+!p3@IKZF1!1.40!23.89!IKZF1;;chr7:50343895..50343936,+!p5@IKZF1!1.35!21.34!IKZF1;;chr11:128392273..128392308,-!p2@ETS1!1.30!78.05!ETS1;;chr3:71355163..71355209,-!p5@FOXP1!1.30!26.44!FOXP1;;chr3:18486354..18486377,-!p2@SATB1!1.30!23.89!SATB1;;chr20:56195474..56195506,-!p1@ZBP1!1.30!18.80!ZBP1;;chr3:71542615..71542644,-!p12@FOXP1!1.27!17.52!FOXP1;;chr15:60884706..60884743,-!p1@RORA!1.26!87.29!RORA;;chr6:106546808..106546833,+!p3@PRDM1!1.25!21.03!PRDM1;;chr6:391743..391759,+!p1@IRF4!1.24!16.57!IRF4;;chr6:91006518..91006570,-!p1@BACH2!1.21!34.41!BACH2;;chr17:37934204..37934241,-!p3@IKZF3!1.21!15.29!IKZF3;;chr2:97202991..97203043,+!p3@ARID5A!1.21!15.29!ARID5A;;chr13:41593425..41593480,-!p1@ELF1!1.20!94.30!ELF1;;chr11:128392085..128392232,-!p1@ETS1!1.19!474.66!ETS1;;chr17:38020557..38020572,-!p4@IKZF3!1.19!14.65!IKZF3;;chr17:38020392..38020477,-!p1@IKZF3!1.19!14.34!IKZF3;;chr2:231090471..231090504,+!p2@SP140!1.18!14.02!SP140;;chr17:38020516..38020544,-!p5@IKZF3!1.16!13.38!IKZF3;;chr11:128563948..128564003,+!p1@FLI1!1.14!153.87!FLI1;;chr14:64970670..64970712,-!p3@ZBTB25!1.14!27.40!ZBTB25;;chr8:67525443..67525459,-!p2@MYBL1!1.13!18.48!MYBL1;;chr4:109089901..109089930,-!p3@LEF1!1.12!12.11!LEF1;;chr11:47400078..47400106,-!p1@SPI1!1.11!11.79!SPI1;;chr16:88752889..88752921,-!p1@SNAI3!1.10!13.70!SNAI3;;chr14:75988831..75988847,+!p2@BATF!1.08!11.15!BATF;;chr21:36421535..36421610,-!p2@RUNX1!1.07!38.86!RUNX1;;chr10:8096772..8096787,+!p2@GATA3!1.07!12.74!GATA3;;chr13:74707894..74707947,-!p6@KLF12!1.07!12.11!KLF12;;chr14:99738138..99738163,-!p1@BCL11B!1.07!10.83!BCL11B;;chr17:37934280..37934299,-!p6@IKZF3!1.07!10.83!IKZF3;;chr16:3313791..3313834,+!p2@ZNF263!1.06!23.57!ZNF263;;chr20:56195525..56195556,-!p2@ZBP1!1.06!10.51!ZBP1;;chr4:57522166..57522260,-!p2@HOPX!1.05!11.79!HOPX;;chr3:71542684..71542720,-!p18@FOXP1!1.05!10.19!FOXP1;;chr4:109089573..109089585,-!p8@LEF1!1.04!9.88!LEF1;;chr1:92951607..92951661,-!p1@GFI1!1.04!9.88!GFI1;;chr17:38020481..38020506,-!p7@IKZF3!1.01!9.24!IKZF3;;chr7:50344289..50344323,+!p1@IKZF1!1.01!9.24!IKZF1;;chrX:106960285..106960299,-!p1@TSC22D3!1.00!245.30!TSC22D3;;chr4:109088940..109089037,-!p4@LEF1!1.00!8.92!LEF1;;chr4:57522598..57522664,-!p3@HOPX!1.00!8.92!HOPX;;chr7:50348268..50348366,+!p4@IKZF1!1.00!8.92!IKZF1;;chrX:101186981..101187030,-!p1@ZMAT1!0.99!29.31!ZMAT1;;chr2:178128250..178128293,-!p6@NFE2L2!0.97!21.34!NFE2L2;;chr3:18487057..18487105,-!p4@SATB1!0.97!8.28!SATB1;;chr3:71542651..71542683,-!p22@FOXP1!0.97!8.28!FOXP1;;chr8:60031619..60031676,-!p1@TOX!0.96!18.16!TOX;;chr19:38085768..38085821,+!p1@ZNF540!0.96!12.42!ZNF540;;chr3:71179699..71179744,-!p2@FOXP1!0.95!61.16!FOXP1;;chr19:20748574..20748599,-!p1@ZNF737!0.94!47.47!ZNF737;;chr16:89787937..89787971,+!p1@ZNF276!0.93!20.07!ZNF276;;chr4:185395633..185395651,-!p2@IRF2!0.93!12.42!IRF2;;chr4:109088130..109088163,-!p13@LEF1!0.92!7.33!LEF1;;chr10:8096631..8096660,+!p1@GATA3!0.90!8.60!GATA3;;chr4:109089996..109090012,-!p5@LEF1!0.90!7.01!LEF1;;chr4:57522674..57522699,-!p5@HOPX!0.90!7.01!HOPX;;chr9:3525727..3525828,-!p2@RFX3!0.89!18.16!RFX3;;chr19:19729477..19729542,-!p1@PBX4!0.89!14.97!PBX4;;chr14:69262947..69262986,-!p3@ZFP36L1!0.89!8.28!ZFP36L1;;chr3:18480217..18480239,-!p3@SATB1!0.89!6.69!SATB1;;chr9:117150303..117150312,-!p3@AKNA!0.88!8.60!AKNA;;chr6:106546731..106546755,+!p5@PRDM1!0.87!6.37!PRDM1;;chr19:9546177..9546224,-!p1@ZNF266!0.86!47.15!ZNF266;;chr17:36861675..36861697,+!p3@MLLT6!0.85!14.97!MLLT6;;chr14:99737850..99737852,-!p3@BCL11B!0.85!6.05!BCL11B;;chr7:137620650..137620677,-!p3@CREB3L2!0.85!6.05!CREB3L2;;chr16:79634624..79634642,-!p1@MAF!0.84!24.85!MAF;;chr20:44600199..44600219,-!p3@ZNF335!0.84!8.28!ZNF335;;chr19:19779686..19779697,+!p3@ZNF101!0.84!7.01!ZNF101;;chr16:89789248..89789270,+!p8@ZNF276!0.83!5.73!ZNF276;;chr4:109086281..109086319,-!p9@LEF1!0.83!5.73!LEF1;;chr4:1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LF2;;chr19:58144529..58144579,+!p1@ZNF211!0.62!20.07!ZNF211;;chr19:23941680..23941704,-!p1@ZNF681!0.62!10.51!ZNF681;;chr13:74708372..74708409,-!p4@KLF12!0.62!8.28!KLF12;;chr1:44679370..44679422,+!p3@DMAP1!0.62!4.46!DMAP1;;chr1:158978768..158978800,+!p8@IFI16!0.62!3.19!IFI16;;chr1:26697189..26697205,-!p2@ZNF683!0.62!3.19!ZNF683;;chr4:149363475..149363492,-!p2@NR3C2!0.62!3.19!NR3C2;;chrX:134429952..134429971,-!p3@ZNF75D!0.62!3.19!ZNF75D;;chr19:21203451..21203475,+!p1@ZNF430!0.61!37.27!ZNF430;;chr19:22018966..22019001,-!p1@ZNF43!0.61!21.03!ZNF43;;chr19:21512202..21512225,-!p1@ZNF708!0.61!18.80!ZNF708;;chr2:208394817..208394834,+!p3@CREB1!0.61!14.34!CREB1;;chr6:35227282..35227330,+!p2@ZNF76!0.61!13.38!ZNF76;;chr9:3525867..3525902,-!p3@RFX3!0.61!12.42!RFX3;;chr9:20622444..20622468,-!p2@MLLT3!0.61!11.47!MLLT3;;chr8:67525473..67525518,-!p1@MYBL1!0.61!7.96!MYBL1;;chr19:35225078..35225120,+!p2@ZNF181!0.61!7.96!ZNF181;;chrX:131623982..131624011,-!p6@MBNL3!0.61!4.78!MBNL3;;chrX:131624056..131624069,-!p2@MBNL3!0.61!4.46!MBNL3;;chr1:158979686..158979745,+!p1@IFI16!0.60!118.82!IFI16;;chr2:145277640..145277771,-!p1@ZEB2!0.60!48.42!ZEB2;;chr7:99097863..99097936,-!p1@ZNF394!0.60!36.32!ZNF394;;chr17:40440481..40440550,+!p1@STAT5A!0.60!25.49!STAT5A;;chr13:41240717..41240735,-!p2@FOXO1!0.60!24.21!FOXO1;;chr10:104154246..104154347,+!p3@NFKB2!0.60!21.66!NFKB2;;chr3:114819124..114819200,-!p3@ZBTB20!0.60!7.96!ZBTB20;;chr6:157098579..157098634,+!p4@ARID1B!0.60!7.65!ARID1B;;chr19:37064145..37064216,-!p1@ZNF529!0.59!29.63!ZNF529;;chr9:88969339..88969422,-!p2@ZCCHC6!0.59!27.40!ZCCHC6;;chr8:42698194..42698239,-!p2@THAP1!0.59!15.29!THAP1;;chr6:126102292..126102329,+!p3@NCOA7!0.59!11.15!NCOA7;;chr14:69262789..69262822,-!p2@ZFP36L1!0.59!8.60!ZFP36L1;;chr6:15249128..15249177,+!p4@JARID2!0.59!5.73!JARID2;;chr8:71316428..71316459,-!p2@NCOA2!0.59!5.42!NCOA2;;chrX:131623932..131623964,-!p7@MBNL3!0.59!4.46!MBNL3;;chr7:150102756..150102772,+!p5@ZNF775!0.59!2.87!ZNF775;;chr7:63505799..63505904,+!p1@ZNF727!0.59!2.87!ZNF727;;chr17:45810816..45810838,+!p2@TBX21!0.59!2.87!TBX21;;chr17:46621146..46621180,-!p10@HOXB2!0.59!2.87!HOXB2;;chr2:100759010..100759035,-!p1@AFF3!0.59!2.87!AFF3;;chr3:71353892..71353928,-!p31@FOXP1!0.59!2.87!FOXP1;;chr4:109087906..109087928,-!p12@LEF1!0.59!2.87!LEF1;;chr12:54778471..54778528,-!p1@ZNF385A!0.59!2.87!ZNF385A;;chr19:38183138..38183157,-!p2@ZNF781!0.59!2.87!ZNF781;;chr14:64970494..64970578,-!p1@ZBTB25!0.58!34.72!ZBTB25;;chr7:64838754..64838778,+!p1@ZNF92!0.58!33.13!ZNF92;;chr6:109804412..109804458,-!p1@ZBTB24!0.58!29.95!ZBTB24;;chr1:249132410..249132456,+!p1@ZNF672!0.58!25.80!ZNF672;;chr19:21579908..21579949,+!p1@ZNF493!0.58!20.39!ZNF493;;chr8:67525524..67525543,-!p3@MYBL1!0.58!5.10!MYBL1;;chr19:49139477..49139552,-!p4@DBP!0.58!3.82!DBP;;chr17:42295777..42295816,-!p7@UBTF!0.58!3.50!UBTF;;chr7:86781734..86781777,+!p1@DMTF1!0.57!61.80!DMTF1;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.57!21.98!ZNF580;;chr19:38270215..38270251,-!p1@ZNF573!0.57!13.38!ZNF573;;chr19:58694742..58694800,+!p2@ZNF274!0.57!13.38!ZNF274;;chr19:12405645..12405685,-!p1@ZNF44!0.57!11.47!ZNF44;;chr12:133707021..133707071,-!p2@ZNF891!0.57!5.10!ZNF891;;chr1:67395855..67395872,+!p5@MIER1!0.57!4.46!MIER1;;chr19:37464063..37464127,+!p2@ZNF568!0.57!3.82!ZNF568;;chr2:231191875..231191918,+!p1@SP140L!0.56!31.54!SP140L;;chr9:73028332..73028385,-!p3@KLF9!0.56!10.83!KLF9;;chr17:38256973..38256990,-!p5@NR1D1!0.56!7.01!NR1D1;;chr3:33482052..33482116,-!p2@UBP1!0.56!4.46!UBP1;;chr19:58239007..58239016,-!p2@ZNF671!0.56!3.50!ZNF671;;chr10:44144292..44144338,-!p1@ZNF32!0.55!20.39!ZNF32;;chr3:23986824..23986848,+!p2@NR1D2!0.55!17.52!NR1D2;;chr4:87928142..87928165,+!p5@AFF1!0.55!10.51!AFF1;;chr16:29817433..29817468,+!p8@MAZ!0.55!9.56!MAZ;;chr9:97021572..97021615,+!p1@ZNF169!0.55!7.65!ZNF169;;chr9:20621927..20621996,-!p3@MLLT3!0.55!4.78!MLLT3;;chr6:45390269..45390298,+!p5@RUNX2!0.55!4.78!RUNX2;;chr5:142814241..142814278,-!p12@NR3C1!0.55!2.55!NR3C1;;chr7:50343800..50343811,+!p8@IKZF1!0.55!2.55!IKZF1;;chr7:92076686..92076700,+!p3@GATAD1!0.55!2.55!GATAD1;;chr3:27764190..27764208,-!p2@EOMES!0.55!2.55!EOMES;;chr4:109089290..109089320,-!p14@LEF1!0.55!2.55!LEF1;;chr10:35416223..35416234,+!p12@CREM!0.55!2.55!CREM;;chr13:41593493..41593506,-!p8@ELF1!0.55!2.55!ELF1;;chr9:32551047..32551066,-!p5@TOPORS!0.55!2.55!TOPORS;;chr19:22193731..22193751,-!p1@ZNF208!0.55!2.55!ZNF208;;chr15:31619326..31619390,+!p2@KLF13!0.54!35.68!KLF13;;chr7:64126503..64126528,+!p1@ZNF107!0.54!21.66!ZNF107;;chr20:25677465..25677497,-!p1@ZNF337!0.54!19.11!ZNF337;;chr2:95831389..95831432,-!p1@ZNF514!0.54!13.06!ZNF514;;chr19:37709076..37709154,+!p1@ZNF383!0.54!9.88!ZNF383;;chr2:97202451..97202462,+!p2@ARID5A!0.54!6.37!ARID5A;;chr8:125985531..125985571,+!p1@ZNF572!0.54!5.73!ZNF572;;chr6:42419649..42419673,-!p3@TRERF1!0.54!4.78!TRERF1;;chr19:49140595..49140607,-!p3@DBP!0.54!3.82!DBP;;chr2:174828545..174828644,-!p1@SP3!0.53!47.15!SP3;;chr4:331578..331615,+!p1@ZNF141!0.53!32.81!ZNF141;;chr2:208031542..208031595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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
+|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12176.12186-129A8.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12176.12186-129A8.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12176.12186-129A8.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12176.12186-129A8.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12176.12186-129A8.hg38.nobarcode.ctss.bed.gz
 |id=FF:12186-129A8
-|is_a=EFO:0002091;;FF:0000002;;FF:0000030;;FF:0000210
+|is_a=EFO:0002091;;FF:0000030;;FF:0000210
+|is_obsolete=
+|library_id=CNhs12176!RDhi10014
+|library_id_phase_based=2:CNhs12176
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12186
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12186
 |name=CD8+ T Cells (pluriselect), donor090309, donation1
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12176,LSID975,release011,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=129
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=2.1355
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.93990968727596e-218!GO:0043227;membrane-bound organelle;3.398265966761e-194!GO:0043231;intracellular membrane-bound organelle;7.16195620042937e-194!GO:0043226;organelle;2.1840312894708e-179!GO:0043229;intracellular organelle;9.62331562081654e-179!GO:0005737;cytoplasm;6.69730987800477e-133!GO:0044422;organelle part;4.76349982698121e-113!GO:0044446;intracellular organelle part;1.85467447547061e-111!GO:0005634;nucleus;4.62149681643531e-101!GO:0043170;macromolecule metabolic process;7.31424877760173e-97!GO:0032991;macromolecular complex;8.89625247290614e-97!GO:0044237;cellular metabolic process;2.85498176757807e-96!GO:0044444;cytoplasmic part;1.70718640093092e-94!GO:0044238;primary metabolic process;6.09474063823375e-92!GO:0030529;ribonucleoprotein complex;5.80763216403406e-90!GO:0044428;nuclear part;2.33347233001499e-79!GO:0003723;RNA binding;3.04907437348638e-79!GO:0043233;organelle lumen;5.06656648080205e-69!GO:0031974;membrane-enclosed lumen;5.06656648080205e-69!GO:0043283;biopolymer metabolic process;8.42193927131524e-66!GO:0010467;gene expression;9.81251431185751e-61!GO:0005739;mitochondrion;9.20655241987668e-57!GO:0006396;RNA processing;1.05844685264365e-55!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.77656810606094e-54!GO:0006412;translation;1.14976811659193e-52!GO:0005515;protein binding;4.17324328876067e-51!GO:0005840;ribosome;1.51558717387463e-49!GO:0031981;nuclear lumen;1.17676598064345e-48!GO:0019538;protein metabolic process;1.31305920058805e-48!GO:0016071;mRNA metabolic process;9.90740667185549e-47!GO:0044267;cellular protein metabolic process;1.57385057773109e-46!GO:0043234;protein complex;2.24373478151179e-46!GO:0033036;macromolecule localization;2.45796485276203e-46!GO:0044260;cellular macromolecule metabolic process;6.83323527541858e-46!GO:0015031;protein transport;6.63236265715023e-45!GO:0045184;establishment of protein localization;4.14831575504024e-43!GO:0008104;protein localization;8.23193995548618e-43!GO:0003735;structural constituent of ribosome;1.90110732382534e-42!GO:0008380;RNA splicing;5.916542563553e-41!GO:0044429;mitochondrial part;1.30847695494002e-40!GO:0003676;nucleic acid binding;1.82141387873132e-40!GO:0006397;mRNA processing;9.0224612131764e-40!GO:0009059;macromolecule biosynthetic process;1.58392628749148e-39!GO:0031090;organelle membrane;4.28002155906907e-38!GO:0031967;organelle envelope;1.22345297748393e-37!GO:0031975;envelope;2.70017467432072e-37!GO:0033279;ribosomal subunit;5.61657061039884e-37!GO:0005829;cytosol;8.89778645016441e-34!GO:0016070;RNA metabolic process;2.21383760475005e-32!GO:0046907;intracellular transport;2.16014790088866e-31!GO:0005681;spliceosome;3.0681319316015e-31!GO:0005654;nucleoplasm;3.53796494503563e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.03576672141481e-30!GO:0044249;cellular biosynthetic process;1.04721780617734e-30!GO:0009058;biosynthetic process;2.03960412476608e-30!GO:0006886;intracellular protein transport;2.66354393246649e-30!GO:0065003;macromolecular complex assembly;2.87241051326032e-29!GO:0006259;DNA metabolic process;3.46796302359984e-29!GO:0016043;cellular component organization and biogenesis;5.02167360269696e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.82955155111641e-28!GO:0022607;cellular component assembly;1.24682504031771e-25!GO:0005740;mitochondrial envelope;1.98395212173977e-25!GO:0044445;cytosolic part;2.2671053061037e-25!GO:0044451;nucleoplasm part;3.60935026730816e-25!GO:0019866;organelle inner membrane;1.31603845018282e-24!GO:0031966;mitochondrial membrane;1.70526185398544e-24!GO:0000166;nucleotide binding;3.75720091845017e-24!GO:0006512;ubiquitin cycle;7.96568532996585e-23!GO:0005743;mitochondrial inner membrane;1.27483088168072e-22!GO:0051641;cellular localization;8.9747057785762e-22!GO:0051649;establishment of cellular localization;1.27062656425225e-21!GO:0006996;organelle organization and biogenesis;6.24959802328952e-21!GO:0006119;oxidative phosphorylation;1.55898983940251e-20!GO:0016874;ligase activity;4.85366001931976e-20!GO:0022618;protein-RNA complex assembly;1.40237370373755e-19!GO:0012501;programmed cell death;1.87395858063733e-19!GO:0006915;apoptosis;2.40461875671804e-19!GO:0015935;small ribosomal subunit;2.40461875671804e-19!GO:0044265;cellular macromolecule catabolic process;5.30401224175258e-19!GO:0005730;nucleolus;8.47522088391303e-19!GO:0015934;large ribosomal subunit;1.29354866847331e-18!GO:0044455;mitochondrial membrane part;1.35689329182643e-18!GO:0008219;cell death;1.50261415612808e-18!GO:0016265;death;1.50261415612808e-18!GO:0043412;biopolymer modification;1.5136827518304e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;2.0662734082671e-18!GO:0019941;modification-dependent protein catabolic process;2.94094772072808e-18!GO:0043632;modification-dependent macromolecule catabolic process;2.94094772072808e-18!GO:0031980;mitochondrial lumen;3.23367847997587e-18!GO:0005759;mitochondrial matrix;3.23367847997587e-18!GO:0006511;ubiquitin-dependent protein catabolic process;5.7999555694396e-18!GO:0044257;cellular protein catabolic process;6.13715608470385e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.94488717636749e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;1.00160879900844e-17!GO:0016462;pyrophosphatase activity;1.00160879900844e-17!GO:0017111;nucleoside-triphosphatase activity;2.68533784386803e-17!GO:0032553;ribonucleotide binding;3.63854752007447e-17!GO:0032555;purine ribonucleotide binding;3.63854752007447e-17!GO:0043228;non-membrane-bound organelle;4.83261123307716e-17!GO:0043232;intracellular non-membrane-bound organelle;4.83261123307716e-17!GO:0016604;nuclear body;5.5509846802781e-17!GO:0043285;biopolymer catabolic process;6.52743496664823e-17!GO:0017076;purine nucleotide binding;1.0779097066672e-16!GO:0006605;protein targeting;1.23712465400068e-16!GO:0006457;protein folding;2.93087300820573e-16!GO:0006464;protein modification process;4.592296716966e-16!GO:0008135;translation factor activity, nucleic acid binding;9.11854510287235e-16!GO:0005746;mitochondrial respiratory chain;1.36569969238123e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.59847483985736e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;7.93115412753336e-15!GO:0006913;nucleocytoplasmic transport;9.23634516440841e-15!GO:0009057;macromolecule catabolic process;9.3090610750534e-15!GO:0006974;response to DNA damage stimulus;1.00575275953888e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.03035335642191e-14!GO:0000375;RNA splicing, via transesterification reactions;1.03035335642191e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.03035335642191e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.28327491912098e-14!GO:0008134;transcription factor binding;1.35556793396218e-14!GO:0051169;nuclear transport;1.6012227714356e-14!GO:0043687;post-translational protein modification;2.70750155360239e-14!GO:0005524;ATP binding;3.02314852117756e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.46485523464507e-14!GO:0006323;DNA packaging;3.75235306710383e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.97416461701547e-14!GO:0012505;endomembrane system;5.7487490359145e-14!GO:0016607;nuclear speck;6.1361134613298e-14!GO:0050136;NADH dehydrogenase (quinone) activity;6.1361134613298e-14!GO:0003954;NADH dehydrogenase activity;6.1361134613298e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.1361134613298e-14!GO:0032559;adenyl ribonucleotide binding;6.59577441077694e-14!GO:0051276;chromosome organization and biogenesis;7.70913066577743e-14!GO:0030554;adenyl nucleotide binding;2.63249074988451e-13!GO:0016887;ATPase activity;3.16717825261913e-13!GO:0050794;regulation of cellular process;3.34554508622335e-13!GO:0042623;ATPase activity, coupled;3.34554508622335e-13!GO:0042981;regulation of apoptosis;3.47863767586164e-13!GO:0043067;regulation of programmed cell death;4.0350638797283e-13!GO:0006281;DNA repair;4.21787481066394e-13!GO:0005761;mitochondrial ribosome;5.05861236703958e-13!GO:0000313;organellar ribosome;5.05861236703958e-13!GO:0030163;protein catabolic process;5.12384154156244e-13!GO:0005635;nuclear envelope;5.23423359037724e-13!GO:0044248;cellular catabolic process;7.55189920336467e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.68737133932911e-12!GO:0042773;ATP synthesis coupled electron transport;1.68737133932911e-12!GO:0031965;nuclear membrane;3.77112015438402e-12!GO:0042254;ribosome biogenesis and assembly;3.79748382942482e-12!GO:0006413;translational initiation;4.71323095211193e-12!GO:0030964;NADH dehydrogenase complex (quinone);4.92649312032326e-12!GO:0045271;respiratory chain complex I;4.92649312032326e-12!GO:0005747;mitochondrial respiratory chain complex I;4.92649312032326e-12!GO:0003743;translation initiation factor activity;5.03466742702094e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.46735559352938e-11!GO:0008639;small protein conjugating enzyme activity;1.47844346604009e-11!GO:0004386;helicase activity;1.77773627532426e-11!GO:0051082;unfolded protein binding;2.35654506216311e-11!GO:0004842;ubiquitin-protein ligase activity;2.80566290984742e-11!GO:0048193;Golgi vesicle transport;3.40807327385143e-11!GO:0048770;pigment granule;4.32008736801805e-11!GO:0042470;melanosome;4.32008736801805e-11!GO:0017038;protein import;4.40510265522721e-11!GO:0019222;regulation of metabolic process;4.82673024099534e-11!GO:0005694;chromosome;6.38854754237165e-11!GO:0019787;small conjugating protein ligase activity;9.74926134803158e-11!GO:0006446;regulation of translational initiation;1.00796279230768e-10!GO:0016568;chromatin modification;1.11103598539081e-10!GO:0007049;cell cycle;1.21196211361009e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.28772504864411e-10!GO:0044453;nuclear membrane part;1.54450935681696e-10!GO:0051186;cofactor metabolic process;2.1170459231857e-10!GO:0006333;chromatin assembly or disassembly;4.32429510640867e-10!GO:0008026;ATP-dependent helicase activity;7.65819343956624e-10!GO:0065004;protein-DNA complex assembly;9.98009067755811e-10!GO:0005794;Golgi apparatus;1.54279077506655e-09!GO:0044427;chromosomal part;1.54462492250316e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.59249184774665e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.80738898737905e-09!GO:0019829;cation-transporting ATPase activity;2.04795849975083e-09!GO:0050657;nucleic acid transport;2.46936683250256e-09!GO:0051236;establishment of RNA localization;2.46936683250256e-09!GO:0050658;RNA transport;2.46936683250256e-09!GO:0016192;vesicle-mediated transport;2.51610993613627e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.72250022261748e-09!GO:0006403;RNA localization;2.73763842418958e-09!GO:0003712;transcription cofactor activity;2.84621827758343e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.07852126213324e-09!GO:0031323;regulation of cellular metabolic process;3.42391692682213e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.55143033747038e-09!GO:0005643;nuclear pore;4.30339851922352e-09!GO:0009259;ribonucleotide metabolic process;7.07360664333157e-09!GO:0043566;structure-specific DNA binding;7.52858100166808e-09!GO:0006399;tRNA metabolic process;9.44841372690629e-09!GO:0016072;rRNA metabolic process;1.0432132847194e-08!GO:0016881;acid-amino acid ligase activity;1.27343616609646e-08!GO:0006364;rRNA processing;1.37701159614664e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.80455916511462e-08!GO:0006164;purine nucleotide biosynthetic process;1.87639767777934e-08!GO:0050789;regulation of biological process;1.89947252838687e-08!GO:0009260;ribonucleotide biosynthetic process;1.92330654487315e-08!GO:0009719;response to endogenous stimulus;2.16837573410984e-08!GO:0008565;protein transporter activity;2.33796486045751e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.35645462773045e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.37194208466608e-08!GO:0065002;intracellular protein transport across a membrane;2.5752300060742e-08!GO:0006793;phosphorus metabolic process;2.60587816814714e-08!GO:0006796;phosphate metabolic process;2.60587816814714e-08!GO:0000785;chromatin;2.64981760729773e-08!GO:0006350;transcription;2.64981760729773e-08!GO:0006163;purine nucleotide metabolic process;2.66040489980411e-08!GO:0006732;coenzyme metabolic process;3.09271062605553e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.36273561623359e-08!GO:0008270;zinc ion binding;4.36522761720801e-08!GO:0009150;purine ribonucleotide metabolic process;5.30362532834283e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.94881579020262e-08!GO:0005768;endosome;6.26865946437551e-08!GO:0022402;cell cycle process;6.52048547028548e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.95308804855964e-08!GO:0051028;mRNA transport;8.01942613398851e-08!GO:0003697;single-stranded DNA binding;8.49853473537303e-08!GO:0004298;threonine endopeptidase activity;1.05078027555565e-07!GO:0051170;nuclear import;1.22789999084017e-07!GO:0010468;regulation of gene expression;1.22789999084017e-07!GO:0051726;regulation of cell cycle;1.22994861049938e-07!GO:0016787;hydrolase activity;1.32098584647112e-07!GO:0032446;protein modification by small protein conjugation;1.42478720268912e-07!GO:0015986;ATP synthesis coupled proton transport;1.46830564768644e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.46830564768644e-07!GO:0000074;regulation of progression through cell cycle;1.52806445182585e-07!GO:0009060;aerobic respiration;1.5981231624883e-07!GO:0007243;protein kinase cascade;1.62860485522854e-07!GO:0000151;ubiquitin ligase complex;1.72398963799337e-07!GO:0051246;regulation of protein metabolic process;1.86961233524932e-07!GO:0006606;protein import into nucleus;2.0767160833783e-07!GO:0016310;phosphorylation;2.17050173291404e-07!GO:0046930;pore complex;2.27816161583525e-07!GO:0000245;spliceosome assembly;2.36102705951352e-07!GO:0016567;protein ubiquitination;3.09872803852994e-07!GO:0016779;nucleotidyltransferase activity;3.30266538029522e-07!GO:0044432;endoplasmic reticulum part;3.39165732493534e-07!GO:0003713;transcription coactivator activity;3.6219154899821e-07!GO:0009055;electron carrier activity;3.73290990975717e-07!GO:0006916;anti-apoptosis;4.48176047985374e-07!GO:0005783;endoplasmic reticulum;7.12134307420169e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.42221460271826e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.91776717487817e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.72648864888978e-07!GO:0009615;response to virus;1.09910856549235e-06!GO:0045333;cellular respiration;1.17254867507992e-06!GO:0006754;ATP biosynthetic process;1.34703859486657e-06!GO:0006753;nucleoside phosphate metabolic process;1.34703859486657e-06!GO:0043069;negative regulation of programmed cell death;1.40741931795172e-06!GO:0006917;induction of apoptosis;1.45839599489008e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.51390411781089e-06!GO:0006334;nucleosome assembly;1.59676973110346e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.64359556549747e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.7047919745468e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.7047919745468e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.72201919286382e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.72201919286382e-06!GO:0009056;catabolic process;1.75037367980753e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.85076657767757e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.86659669368396e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.86659669368396e-06!GO:0003724;RNA helicase activity;1.88611675345899e-06!GO:0006366;transcription from RNA polymerase II promoter;1.91789323809338e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.07675591883834e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.07675591883834e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.07675591883834e-06!GO:0031497;chromatin assembly;2.07675591883834e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.18230523958694e-06!GO:0046034;ATP metabolic process;2.18230523958694e-06!GO:0009141;nucleoside triphosphate metabolic process;2.2095596641496e-06!GO:0012502;induction of programmed cell death;2.25163495403564e-06!GO:0016740;transferase activity;2.3293376475346e-06!GO:0016563;transcription activator activity;2.45786346775553e-06!GO:0043066;negative regulation of apoptosis;2.60625977328302e-06!GO:0005789;endoplasmic reticulum membrane;2.77026718911222e-06!GO:0006260;DNA replication;2.80358663822785e-06!GO:0043065;positive regulation of apoptosis;2.87732370988872e-06!GO:0065009;regulation of a molecular function;2.88003498992918e-06!GO:0051188;cofactor biosynthetic process;3.46350224363648e-06!GO:0006461;protein complex assembly;3.57387270024038e-06!GO:0048523;negative regulation of cellular process;3.64994629666227e-06!GO:0051168;nuclear export;3.79575026524827e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.20701987111882e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.20701987111882e-06!GO:0043068;positive regulation of programmed cell death;4.21937328079936e-06!GO:0043038;amino acid activation;4.57868446814217e-06!GO:0006418;tRNA aminoacylation for protein translation;4.57868446814217e-06!GO:0043039;tRNA aminoacylation;4.57868446814217e-06!GO:0045259;proton-transporting ATP synthase complex;4.84625572178933e-06!GO:0032774;RNA biosynthetic process;5.26322351749481e-06!GO:0006351;transcription, DNA-dependent;6.5517076591768e-06!GO:0046914;transition metal ion binding;7.89955309966375e-06!GO:0045449;regulation of transcription;9.80214453180714e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.01372447722721e-05!GO:0015399;primary active transmembrane transporter activity;1.01372447722721e-05!GO:0006613;cotranslational protein targeting to membrane;1.01630267088088e-05!GO:0030120;vesicle coat;1.03069795785732e-05!GO:0030662;coated vesicle membrane;1.03069795785732e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.11698738773012e-05!GO:0006099;tricarboxylic acid cycle;1.11933440298448e-05!GO:0046356;acetyl-CoA catabolic process;1.11933440298448e-05!GO:0005770;late endosome;1.32791940225393e-05!GO:0006401;RNA catabolic process;1.56071220425909e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.76246159401308e-05!GO:0005793;ER-Golgi intermediate compartment;1.78513344431846e-05!GO:0048475;coated membrane;1.85464584114777e-05!GO:0030117;membrane coat;1.85464584114777e-05!GO:0019899;enzyme binding;2.13342378620167e-05!GO:0005525;GTP binding;2.17251624309635e-05!GO:0007242;intracellular signaling cascade;2.21200989554e-05!GO:0006084;acetyl-CoA metabolic process;2.26375468206794e-05!GO:0043623;cellular protein complex assembly;2.66181391663935e-05!GO:0008632;apoptotic program;2.69565826209706e-05!GO:0007005;mitochondrion organization and biogenesis;2.95916914319693e-05!GO:0005773;vacuole;3.1169692454183e-05!GO:0001772;immunological synapse;3.61419206505879e-05!GO:0045786;negative regulation of progression through cell cycle;3.6676163815719e-05!GO:0009108;coenzyme biosynthetic process;3.82549223280038e-05!GO:0006417;regulation of translation;4.06794193693781e-05!GO:0065007;biological regulation;4.70251737188415e-05!GO:0031324;negative regulation of cellular metabolic process;4.85468071509907e-05!GO:0016564;transcription repressor activity;5.90164888975414e-05!GO:0008186;RNA-dependent ATPase activity;6.00238421900243e-05!GO:0003690;double-stranded DNA binding;7.10627266557338e-05!GO:0000278;mitotic cell cycle;7.25046374070332e-05!GO:0006402;mRNA catabolic process;7.44228402440564e-05!GO:0006612;protein targeting to membrane;7.50136531978628e-05!GO:0000323;lytic vacuole;7.63846441413565e-05!GO:0005764;lysosome;7.63846441413565e-05!GO:0048519;negative regulation of biological process;7.96484346076494e-05!GO:0009109;coenzyme catabolic process;9.16073851814526e-05!GO:0005762;mitochondrial large ribosomal subunit;9.28048665647412e-05!GO:0000315;organellar large ribosomal subunit;9.28048665647412e-05!GO:0003899;DNA-directed RNA polymerase activity;0.000106409838043362!GO:0043492;ATPase activity, coupled to movement of substances;0.000107195728950752!GO:0044431;Golgi apparatus part;0.000107825657835668!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000117305225522699!GO:0042101;T cell receptor complex;0.00012162329083675!GO:0051187;cofactor catabolic process;0.000127187446864171!GO:0006752;group transfer coenzyme metabolic process;0.000137056227716293!GO:0003677;DNA binding;0.000143589954463279!GO:0016363;nuclear matrix;0.000148530596448685!GO:0006355;regulation of transcription, DNA-dependent;0.00015016685042817!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000151777016569788!GO:0003729;mRNA binding;0.000162254405186572!GO:0006310;DNA recombination;0.000163481311164924!GO:0005813;centrosome;0.000167774334322575!GO:0044440;endosomal part;0.000169560461053303!GO:0010008;endosome membrane;0.000169560461053303!GO:0031326;regulation of cellular biosynthetic process;0.000181224873952501!GO:0004004;ATP-dependent RNA helicase activity;0.000187425848778839!GO:0005885;Arp2/3 protein complex;0.000191661524005273!GO:0009117;nucleotide metabolic process;0.000195229018871188!GO:0008234;cysteine-type peptidase activity;0.000196571807644461!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00022785565876454!GO:0043021;ribonucleoprotein binding;0.000259219841284601!GO:0003924;GTPase activity;0.000274986253553896!GO:0042110;T cell activation;0.000277132293689182!GO:0005667;transcription factor complex;0.000303778089577756!GO:0000314;organellar small ribosomal subunit;0.000307693245926855!GO:0005763;mitochondrial small ribosomal subunit;0.000307693245926855!GO:0043681;protein import into mitochondrion;0.000308941738165903!GO:0032561;guanyl ribonucleotide binding;0.000312653833455376!GO:0019001;guanyl nucleotide binding;0.000312653833455376!GO:0008654;phospholipid biosynthetic process;0.000316388259506385!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00039303775836615!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000399100104977801!GO:0016481;negative regulation of transcription;0.000404153146695392!GO:0009967;positive regulation of signal transduction;0.000442103453808097!GO:0060090;molecular adaptor activity;0.000442916776630562!GO:0009892;negative regulation of metabolic process;0.000500193113792805!GO:0004674;protein serine/threonine kinase activity;0.000518811409485512!GO:0005815;microtubule organizing center;0.000521652501786358!GO:0006891;intra-Golgi vesicle-mediated transport;0.000573043524014103!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000606868592896034!GO:0048522;positive regulation of cellular process;0.000638337813198009!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000671735566461557!GO:0031072;heat shock protein binding;0.000681893173891315!GO:0051427;hormone receptor binding;0.0006839428850308!GO:0030384;phosphoinositide metabolic process;0.000706205920312111!GO:0008168;methyltransferase activity;0.000741551145695524!GO:0008033;tRNA processing;0.000784352529077748!GO:0006383;transcription from RNA polymerase III promoter;0.000792093226798419!GO:0006352;transcription initiation;0.000799378012036285!GO:0009889;regulation of biosynthetic process;0.00084759565621604!GO:0016741;transferase activity, transferring one-carbon groups;0.00084859430033873!GO:0005798;Golgi-associated vesicle;0.000849523151796367!GO:0007264;small GTPase mediated signal transduction;0.000895958670012034!GO:0000786;nucleosome;0.000910213567856533!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.000973356099609522!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000975964612368211!GO:0016251;general RNA polymerase II transcription factor activity;0.00102990451630558!GO:0006611;protein export from nucleus;0.00117838510764363!GO:0046489;phosphoinositide biosynthetic process;0.00120357730805253!GO:0005774;vacuolar membrane;0.0012299381648464!GO:0050790;regulation of catalytic activity;0.00126790471402532!GO:0035257;nuclear hormone receptor binding;0.00130393507308942!GO:0006261;DNA-dependent DNA replication;0.00133590269221841!GO:0008047;enzyme activator activity;0.0013622676475581!GO:0004518;nuclease activity;0.0013622676475581!GO:0046649;lymphocyte activation;0.00139236309299143!GO:0051252;regulation of RNA metabolic process;0.00142367457373595!GO:0032259;methylation;0.00153315860599378!GO:0000087;M phase of mitotic cell cycle;0.00161150189586612!GO:0015992;proton transport;0.00161729990267539!GO:0006818;hydrogen transport;0.00162073531234538!GO:0000139;Golgi membrane;0.00167646247711424!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00172993075831194!GO:0019867;outer membrane;0.00177930652393269!GO:0044452;nucleolar part;0.00181373003084428!GO:0016197;endosome transport;0.00182997372996263!GO:0031902;late endosome membrane;0.00196726528053401!GO:0048500;signal recognition particle;0.00200450551760124!GO:0005769;early endosome;0.00200887512579142!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00213784848205769!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00213784848205769!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00213784848205769!GO:0031968;organelle outer membrane;0.00213784848205769!GO:0022890;inorganic cation transmembrane transporter activity;0.00220484017822911!GO:0005741;mitochondrial outer membrane;0.00222645416940284!GO:0016859;cis-trans isomerase activity;0.00230587029779836!GO:0005684;U2-dependent spliceosome;0.00233715032224483!GO:0007006;mitochondrial membrane organization and biogenesis;0.00234949360888031!GO:0005765;lysosomal membrane;0.00242510691542724!GO:0007067;mitosis;0.00256808417825564!GO:0006650;glycerophospholipid metabolic process;0.00267392216556516!GO:0044437;vacuolar part;0.00299221782863183!GO:0046474;glycerophospholipid biosynthetic process;0.00301785239111424!GO:0003714;transcription corepressor activity;0.00321410182161337!GO:0043414;biopolymer methylation;0.0032509116627667!GO:0043488;regulation of mRNA stability;0.00331166581823334!GO:0043487;regulation of RNA stability;0.00331166581823334!GO:0006414;translational elongation;0.00332136745204156!GO:0006607;NLS-bearing substrate import into nucleus;0.00334697139512603!GO:0007265;Ras protein signal transduction;0.00334697139512603!GO:0004527;exonuclease activity;0.00340473174123806!GO:0008624;induction of apoptosis by extracellular signals;0.00343958647837297!GO:0022415;viral reproductive process;0.00354609387791228!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00366296531961905!GO:0015002;heme-copper terminal oxidase activity;0.00366296531961905!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00366296531961905!GO:0004129;cytochrome-c oxidase activity;0.00366296531961905!GO:0006338;chromatin remodeling;0.00408342022718846!GO:0030695;GTPase regulator activity;0.00415771689372231!GO:0006405;RNA export from nucleus;0.00429220295286962!GO:0003725;double-stranded RNA binding;0.00430178735775578!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00437753602356065!GO:0045321;leukocyte activation;0.00438370971771216!GO:0009165;nucleotide biosynthetic process;0.00447236441726797!GO:0003746;translation elongation factor activity;0.00456229146069178!GO:0016584;nucleosome positioning;0.00458684364704556!GO:0051087;chaperone binding;0.00466180730985275!GO:0015631;tubulin binding;0.00466180730985275!GO:0051539;4 iron, 4 sulfur cluster binding;0.00471488409313111!GO:0007034;vacuolar transport;0.00475543951308378!GO:0031252;leading edge;0.00492711394272028!GO:0006289;nucleotide-excision repair;0.00501528792681714!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00509558317381158!GO:0045047;protein targeting to ER;0.00509558317381158!GO:0005070;SH3/SH2 adaptor activity;0.00547679381151553!GO:0022403;cell cycle phase;0.00547841424851884!GO:0030658;transport vesicle membrane;0.00576233292343952!GO:0051301;cell division;0.00577106285893043!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0058002546225587!GO:0019783;small conjugating protein-specific protease activity;0.00587108556171398!GO:0005637;nuclear inner membrane;0.00612081971286884!GO:0047485;protein N-terminus binding;0.00619564785827399!GO:0003678;DNA helicase activity;0.00627255312713179!GO:0051251;positive regulation of lymphocyte activation;0.00653014117319467!GO:0016853;isomerase activity;0.00665381939908896!GO:0006302;double-strand break repair;0.0066969829564154!GO:0004843;ubiquitin-specific protease activity;0.00675134835796045!GO:0003711;transcription elongation regulator activity;0.00675134835796045!GO:0008312;7S RNA binding;0.00680253352154464!GO:0051540;metal cluster binding;0.00682118090532592!GO:0051536;iron-sulfur cluster binding;0.00682118090532592!GO:0051789;response to protein stimulus;0.00713656283123147!GO:0006986;response to unfolded protein;0.00713656283123147!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00714638052190969!GO:0051920;peroxiredoxin activity;0.00733025107217837!GO:0048487;beta-tubulin binding;0.00748784311694647!GO:0042802;identical protein binding;0.00751561628967981!GO:0031625;ubiquitin protein ligase binding;0.00781331290115967!GO:0048471;perinuclear region of cytoplasm;0.00782871772747014!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00793802525158699!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00793802525158699!GO:0048518;positive regulation of biological process;0.00801964257982259!GO:0051092;activation of NF-kappaB transcription factor;0.00838949350151505!GO:0000049;tRNA binding;0.00845394005506022!GO:0030118;clathrin coat;0.00863876976773314!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0086539516065439!GO:0005669;transcription factor TFIID complex;0.00883294694026272!GO:0051090;regulation of transcription factor activity;0.00885690203024524!GO:0006839;mitochondrial transport;0.00896424823051759!GO:0006626;protein targeting to mitochondrion;0.00902907883404499!GO:0051098;regulation of binding;0.00952777726242138!GO:0030880;RNA polymerase complex;0.00952777726242138!GO:0003684;damaged DNA binding;0.00995221575322937!GO:0022411;cellular component disassembly;0.00999725796203218!GO:0015980;energy derivation by oxidation of organic compounds;0.010187078218823!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0111293847679679!GO:0016272;prefoldin complex;0.0111613839319806!GO:0044438;microbody part;0.0115236444199999!GO:0044439;peroxisomal part;0.0115236444199999!GO:0032200;telomere organization and biogenesis;0.0115572155552032!GO:0000723;telomere maintenance;0.0115572155552032!GO:0006376;mRNA splice site selection;0.011587520731416!GO:0000389;nuclear mRNA 3'-splice site recognition;0.011587520731416!GO:0033116;ER-Golgi intermediate compartment membrane;0.0116480297275007!GO:0046966;thyroid hormone receptor binding;0.0117540831952511!GO:0045892;negative regulation of transcription, DNA-dependent;0.0118016745167923!GO:0006497;protein amino acid lipidation;0.0118405608216528!GO:0004532;exoribonuclease activity;0.0120895653287113!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0120895653287113!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0121099082353755!GO:0030518;steroid hormone receptor signaling pathway;0.0125320030978908!GO:0051336;regulation of hydrolase activity;0.0125878128415299!GO:0006506;GPI anchor biosynthetic process;0.0127797532072491!GO:0045454;cell redox homeostasis;0.0131173844321555!GO:0030660;Golgi-associated vesicle membrane;0.0131499505418104!GO:0008017;microtubule binding;0.0131499505418104!GO:0004221;ubiquitin thiolesterase activity;0.0131855042898561!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.013211382737985!GO:0030663;COPI coated vesicle membrane;0.0136654026128664!GO:0030126;COPI vesicle coat;0.0136654026128664!GO:0008097;5S rRNA binding;0.013848035489365!GO:0000209;protein polyubiquitination;0.0139905483036389!GO:0018193;peptidyl-amino acid modification;0.0141767767088484!GO:0009966;regulation of signal transduction;0.0141960839439165!GO:0003682;chromatin binding;0.014309422954398!GO:0046467;membrane lipid biosynthetic process;0.014512454939451!GO:0005083;small GTPase regulator activity;0.014657337315561!GO:0030137;COPI-coated vesicle;0.0147413962357453!GO:0005869;dynactin complex;0.0148927374062941!GO:0016585;chromatin remodeling complex;0.015042666349081!GO:0008408;3'-5' exonuclease activity;0.015331692941512!GO:0005657;replication fork;0.015344853874716!GO:0008022;protein C-terminus binding;0.0153493459376367!GO:0009112;nucleobase metabolic process;0.0153760330840969!GO:0009116;nucleoside metabolic process;0.0155206234861601!GO:0046822;regulation of nucleocytoplasmic transport;0.0159874661560795!GO:0042287;MHC protein binding;0.0160264790198453!GO:0005096;GTPase activator activity;0.0167810974154834!GO:0015923;mannosidase activity;0.0173139153907327!GO:0032940;secretion by cell;0.0173429011411456!GO:0006505;GPI anchor metabolic process;0.0173429011411456!GO:0031903;microbody membrane;0.0175548539131637!GO:0005778;peroxisomal membrane;0.0175548539131637!GO:0008180;signalosome;0.0178962469215449!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0183664526968496!GO:0000428;DNA-directed RNA polymerase complex;0.0183664526968496!GO:0005048;signal sequence binding;0.0184807604283775!GO:0050852;T cell receptor signaling pathway;0.018948068478203!GO:0040029;regulation of gene expression, epigenetic;0.0193573403026258!GO:0000059;protein import into nucleus, docking;0.0195499126091374!GO:0007050;cell cycle arrest;0.0197883757369611!GO:0043621;protein self-association;0.0199240850922723!GO:0015630;microtubule cytoskeleton;0.0199673568124654!GO:0031982;vesicle;0.0200315015986451!GO:0004197;cysteine-type endopeptidase activity;0.0209349450135165!GO:0050811;GABA receptor binding;0.0213480814366237!GO:0002757;immune response-activating signal transduction;0.0213480814366237!GO:0048002;antigen processing and presentation of peptide antigen;0.0213636993406824!GO:0050870;positive regulation of T cell activation;0.0214239814591917!GO:0019843;rRNA binding;0.0219240291124055!GO:0045045;secretory pathway;0.0222571196361652!GO:0016605;PML body;0.0225469025466654!GO:0042393;histone binding;0.0226131096684982!GO:0030867;rough endoplasmic reticulum membrane;0.0239924924053715!GO:0005521;lamin binding;0.0240825154415493!GO:0004576;oligosaccharyl transferase activity;0.0247056837189321!GO:0043022;ribosome binding;0.024838388342406!GO:0000781;chromosome, telomeric region;0.0253142797061031!GO:0030521;androgen receptor signaling pathway;0.0253967812943001!GO:0005777;peroxisome;0.0261636873500959!GO:0042579;microbody;0.0261636873500959!GO:0045309;protein phosphorylated amino acid binding;0.0261636873500959!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0261650707707354!GO:0010257;NADH dehydrogenase complex assembly;0.0261650707707354!GO:0033108;mitochondrial respiratory chain complex assembly;0.0261650707707354!GO:0008287;protein serine/threonine phosphatase complex;0.0262200504002333!GO:0002376;immune system process;0.0262524190648306!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0262524190648306!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0263737025104557!GO:0001784;phosphotyrosine binding;0.0265488202320551!GO:0004722;protein serine/threonine phosphatase activity;0.0266929463830363!GO:0031124;mRNA 3'-end processing;0.0268344721535599!GO:0005095;GTPase inhibitor activity;0.0270488871025337!GO:0000287;magnesium ion binding;0.0271841746917666!GO:0016301;kinase activity;0.0278868601785292!GO:0006284;base-excision repair;0.0279175073369728!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0280605099947995!GO:0006595;polyamine metabolic process;0.02820471659679!GO:0022406;membrane docking;0.0287259026129696!GO:0048278;vesicle docking;0.0287259026129696!GO:0030522;intracellular receptor-mediated signaling pathway;0.0287326486128825!GO:0001819;positive regulation of cytokine production;0.0289157185529517!GO:0030125;clathrin vesicle coat;0.0289625901000214!GO:0030665;clathrin coated vesicle membrane;0.0289625901000214!GO:0006144;purine base metabolic process;0.0290999440008157!GO:0030258;lipid modification;0.0296415260852911!GO:0043087;regulation of GTPase activity;0.0296415260852911!GO:0046979;TAP2 binding;0.0303050574904412!GO:0046977;TAP binding;0.0303050574904412!GO:0046978;TAP1 binding;0.0303050574904412!GO:0051219;phosphoprotein binding;0.0303554837375015!GO:0050863;regulation of T cell activation;0.0304921344610563!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0304937417573568!GO:0005832;chaperonin-containing T-complex;0.0308719430286871!GO:0006919;caspase activation;0.0309273047549272!GO:0016790;thiolester hydrolase activity;0.0310548627328841!GO:0000118;histone deacetylase complex;0.0315052701771865!GO:0050865;regulation of cell activation;0.0318880426182685!GO:0000738;DNA catabolic process, exonucleolytic;0.0318880426182685!GO:0042158;lipoprotein biosynthetic process;0.0320088129198259!GO:0051052;regulation of DNA metabolic process;0.0323044329605372!GO:0051249;regulation of lymphocyte activation;0.0323044329605372!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0325172883907846!GO:0048468;cell development;0.0325408120685316!GO:0000279;M phase;0.0327171072027223!GO:0042608;T cell receptor binding;0.0332025347349684!GO:0031123;RNA 3'-end processing;0.0333296605851202!GO:0019904;protein domain specific binding;0.0333988838590967!GO:0008139;nuclear localization sequence binding;0.0338987241359737!GO:0006904;vesicle docking during exocytosis;0.0338987241359737!GO:0008094;DNA-dependent ATPase activity;0.0339931864256533!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0340802502441492!GO:0000178;exosome (RNase complex);0.0345151629083276!GO:0007041;lysosomal transport;0.0345311464733902!GO:0000776;kinetochore;0.0348958382153159!GO:0008276;protein methyltransferase activity;0.0349406434886789!GO:0000119;mediator complex;0.035053006048875!GO:0030132;clathrin coat of coated pit;0.035053006048875!GO:0016791;phosphoric monoester hydrolase activity;0.0352027239342145!GO:0008213;protein amino acid alkylation;0.0353994888769458!GO:0006479;protein amino acid methylation;0.0353994888769458!GO:0031461;cullin-RING ubiquitin ligase complex;0.0354091476392369!GO:0002764;immune response-regulating signal transduction;0.0355437714466638!GO:0016788;hydrolase activity, acting on ester bonds;0.0355652415647381!GO:0008250;oligosaccharyl transferase complex;0.0359341473057245!GO:0030119;AP-type membrane coat adaptor complex;0.0363589490499925!GO:0043281;regulation of caspase activity;0.0364057043255344!GO:0006950;response to stress;0.0367687510917516!GO:0031988;membrane-bound vesicle;0.0372762067384518!GO:0032508;DNA duplex unwinding;0.0372762067384518!GO:0032392;DNA geometric change;0.0372762067384518!GO:0016044;membrane organization and biogenesis;0.0373618947710026!GO:0005689;U12-dependent spliceosome;0.037954136172187!GO:0045058;T cell selection;0.0384331462099833!GO:0019883;antigen processing and presentation of endogenous antigen;0.0389429803040539!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0392495663593893!GO:0000090;mitotic anaphase;0.039871655153634!GO:0051322;anaphase;0.039871655153634!GO:0007004;telomere maintenance via telomerase;0.0399515037143104!GO:0030176;integral to endoplasmic reticulum membrane;0.0413458823418523!GO:0019058;viral infectious cycle;0.0425381903337911!GO:0016505;apoptotic protease activator activity;0.0426577471961809!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0426577471961809!GO:0006091;generation of precursor metabolites and energy;0.0437622489568572!GO:0005784;translocon complex;0.0439434641846347!GO:0031410;cytoplasmic vesicle;0.0443079252086435!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0453242046002906!GO:0019079;viral genome replication;0.0454251656337602!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0454907907487157!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0454907907487157!GO:0030131;clathrin adaptor complex;0.045815917185331!GO:0005791;rough endoplasmic reticulum;0.0458404287169157!GO:0000123;histone acetyltransferase complex;0.0458404287169157!GO:0030911;TPR domain binding;0.0458404287169157!GO:0009451;RNA modification;0.0459381170226119!GO:0000303;response to superoxide;0.0459979629664728!GO:0017134;fibroblast growth factor binding;0.0462392299088845!GO:0006914;autophagy;0.0467129610421795!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0467243923178771!GO:0009161;ribonucleoside monophosphate metabolic process;0.0467243923178771!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0467243923178771!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0467739954879169!GO:0016311;dephosphorylation;0.0467879617279844!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0470465567809993!GO:0008538;proteasome activator activity;0.0477914442137989!GO:0007259;JAK-STAT cascade;0.0480884954621673!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0486553340591667!GO:0015036;disulfide oxidoreductase activity;0.0487401262867923!GO:0004003;ATP-dependent DNA helicase activity;0.0490781124986115!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0490781124986115!GO:0051223;regulation of protein transport;0.0490781124986115!GO:0030127;COPII vesicle coat;0.0496141085877858!GO:0012507;ER to Golgi transport vesicle membrane;0.0496141085877858!GO:0000339;RNA cap binding;0.0496504911164965
 |sample_id=12186
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=blood
 |top_motifs=ELF1,2,4:2.56360410536;RUNX1..3:2.29312340765;CDX1,2,4:2.13507900242;FOXO1,3,4:2.07950141402;PAX3,7:2.04549768989;ETS1,2:1.9901261018;PDX1:1.93270279666;STAT1,3:1.80371474367;FOX{D1,D2}:1.70577829081;RORA:1.62928879854;T:1.61804502138;FOX{F1,F2,J1}:1.53156315467;ELK1,4_GABP{A,B1}:1.49695935744;SPI1:1.42866368806;TLX2:1.3677390762;IRF1,2:1.27284446415;DMAP1_NCOR{1,2}_SMARC:1.27038927328;HMX1:1.16785050776;BPTF:1.13020145684;SPIB:1.08647948546;PBX1:1.07556375296;LEF1_TCF7_TCF7L1,2:1.06038657009;GATA6:0.990750583133;NKX6-1,2:0.974247283317;YY1:0.961307152471;PAX6:0.957996629539;CREB1:0.954862696658;ZBTB16:0.911007256074;IKZF2:0.901216615722;NANOG{mouse}:0.831038432249;IRF7:0.799479190742;BREu{core}:0.788227546495;MYOD1:0.730775288186;NKX2-2,8:0.718545002745;TGIF1:0.694118934076;FOXA2:0.681383512129;RFX2..5_RFXANK_RFXAP:0.631386617941;PAX4:0.568267369964;VSX1,2:0.568191151066;CRX:0.548950925739;SOX5:0.533488102454;FOXN1:0.500191486156;ATF5_CREB3:0.478620186282;HOX{A6,A7,B6,B7}:0.424194761663;ZEB1:0.390432650561;SNAI1..3:0.367590528467;NRF1:0.34918802115;LMO2:0.332990611215;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.312320524692;FOXP1:0.307330601652;SPZ1:0.29203204703;NFKB1_REL_RELA:0.274245400035;FOX{I1,J2}:0.261143808566;FOXP3:0.255014913836;EP300:0.246686010468;ADNP_IRX_SIX_ZHX:0.237648466967;NR1H4:0.23507538879;CUX2:0.222803611779;NFIL3:0.219481139534;NKX2-1,4:0.214328150201;ZNF143:0.213839211947;NR5A1,2:0.212628442554;POU1F1:0.207145271957;NFATC1..3:0.186381205172;NFIX:0.18223757121;PAX2:0.176647038603;RBPJ:0.16404452537;SOX2:0.126704415054;POU2F1..3:0.115338614745;AR:0.106272060819;MYB:0.0958160958779;SREBF1,2:0.0673731813578;ALX1:0.0640863319974;OCT4_SOX2{dimer}:0.0634488038577;PRRX1,2:0.0427472248183;ATF2:0.0242754307412;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.014747514708;FOXD3:-0.0225863910279;STAT5{A,B}:-0.0436488427767;STAT2,4,6:-0.0440243939359;AHR_ARNT_ARNT2:-0.0549102453126;TAL1_TCF{3,4,12}:-0.0582924021886;HES1:-0.0882439223144;ZNF148:-0.161009000556;E2F1..5:-0.174955230987;DBP:-0.180716659859;FOXQ1:-0.189515832432;GCM1,2:-0.199145788136;HNF4A_NR2F1,2:-0.205587971587;NFY{A,B,C}:-0.242951641019;RXRA_VDR{dimer}:-0.264206721415;HNF1A:-0.285125884869;GLI1..3:-0.313616880424;JUN:-0.315989450167;ATF4:-0.322545929512;CEBPA,B_DDIT3:-0.338644234244;TBX4,5:-0.352748090391;HAND1,2:-0.359577489231;PAX5:-0.3675672233;GFI1:-0.372835428244;MYFfamily:-0.376729591676;NANOG:-0.391223080858;NHLH1,2:-0.392565432624;SMAD1..7,9:-0.399839455975;NR3C1:-0.4131858439;TFAP4:-0.413764604647;FOSL2:-0.423272609521;NKX3-1:-0.434283020042;PITX1..3:-0.435334668278;AIRE:-0.483557975945;POU5F1:-0.486291275222;ONECUT1,2:-0.489925086629;ARID5B:-0.498977844021;PAX8:-0.512378112468;NFE2L2:-0.512700640639;RREB1:-0.522153021439;FOXM1:-0.526593803866;ALX4:-0.537049124336;NFE2L1:-0.561360169088;FOS_FOS{B,L1}_JUN{B,D}:-0.569516915972;BACH2:-0.57354474292;ZNF423:-0.582784117277;ESR1:-0.606396137407;ZNF384:-0.623691020975;HLF:-0.626978979989;MZF1:-0.63616537263;MEF2{A,B,C,D}:-0.662940962331;EGR1..3:-0.668709723559;MTF1:-0.669607004824;NKX2-3_NKX2-5:-0.686627870018;HMGA1,2:-0.68775841057;HBP1_HMGB_SSRP1_UBTF:-0.691156037516;ATF6:-0.707799224849;NFE2:-0.716566295179;RFX1:-0.717100389395;TFCP2:-0.719803974559;SRF:-0.744275893713;ZFP161:-0.771028118054;EVI1:-0.78595810128;HOXA9_MEIS1:-0.787654583287;REST:-0.789267811751;MAFB:-0.79994655919;MED-1{core}:-0.804934115445;SOX{8,9,10}:-0.847520944938;ZNF238:-0.900900366835;HIF1A:-0.928405629257;LHX3,4:-0.93852423018;MYBL2:-0.963384391469;CDC5L:-0.966051525519;EN1,2:-0.982706164455;MAZ:-0.983543327389;NR6A1:-1.00554384963;MTE{core}:-1.00577582595;PATZ1:-1.00919854123;XCPE1{core}:-1.02667287326;KLF4:-1.05260763707;PRDM1:-1.05641228857;ZBTB6:-1.0666870488;GFI1B:-1.07808029562;PPARG:-1.07872028612;TFDP1:-1.08404954265;POU6F1:-1.09620182319;TOPORS:-1.1069545759;TP53:-1.11008684628;SOX17:-1.12069908985;GATA4:-1.12114597686;HSF1,2:-1.14138375008;bHLH_family:-1.14459647484;TEF:-1.16012894711;HOX{A4,D4}:-1.20274950939;HOX{A5,B5}:-1.2262234773;GTF2I:-1.23825781605;UFEwm:-1.24297560372;EBF1:-1.34193609108;TFAP2B:-1.36367098779;GZF1:-1.36736263727;FOXL1:-1.37121998575;GTF2A1,2:-1.38555572287;NKX3-2:-1.41398974062;HIC1:-1.42933926545;TLX1..3_NFIC{dimer}:-1.47448405801;TBP:-1.49722599976;ZIC1..3:-1.50682425326;SP1:-1.52977271993;XBP1:-1.59111248146;ESRRA:-1.62434241562;POU3F1..4:-1.6679948696;TEAD1:-1.6962556731;RXR{A,B,G}:-1.74173701767;TFAP2{A,C}:-1.75651411661;IKZF1:-2.31444197027;PAX1,9:-2.35356289672
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12186-129A8;search_select_hide=table117:FF:12186-129A8
 }}

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FF:12186-129A8: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:33, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0