FF:12209-129D4: Difference between revisions

Latest revision as of 18:34, 4 June 2020

Name:	CD19+ B Cells (pluriselect), donor090612, donation2
Species:	Human (Homo sapiens)
Library ID:	CNhs12185,RDhi10011
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	NA
age	NA
cell type	b cell
cell line	NA
company	NA
collaboration	Matched_genome_OSC(contact:Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00013675

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12185		CAGE		DRX008056		DRR008928
RDhi10011		RNA-Seq		DRX012345		DRR013793

Accession ID Hg19

Library id		BAM		CTSS
CNhs12185		DRZ000353		DRZ001738
RDhi10011		DRZ002994

Accession ID Hg38

Library id		BAM		CTSS
CNhs12185		DRZ011703		DRZ013088
RDhi10011

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.1
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.28
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.0902
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.294
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.273
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.366
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.521
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.75
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.277
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	1.457
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.449
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.21
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.571
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.0292
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.0158
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.36
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.216
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.951
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.172
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.483
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.22
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.22
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.11
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.22
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	1.064
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.757
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12185

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	8.59857e-6
MA0003.1	MA0003.1	0.346
MA0004.1	MA0004.1	0.372
MA0006.1	MA0006.1	0.538
MA0007.1	MA0007.1	0.496
MA0009.1	MA0009.1	0.951
MA0014.1	MA0014.1	0.722
MA0017.1	MA0017.1	0.0195
MA0018.2	MA0018.2	0.983
MA0019.1	MA0019.1	0.591
MA0024.1	MA0024.1	0.996
MA0025.1	MA0025.1	0.424
MA0027.1	MA0027.1	0.431
MA0028.1	MA0028.1	3.2637e-5
MA0029.1	MA0029.1	0.488
MA0030.1	MA0030.1	0.00943
MA0031.1	MA0031.1	0.0387
MA0035.2	MA0035.2	0.346
MA0038.1	MA0038.1	0.348
MA0039.2	MA0039.2	0.341
MA0040.1	MA0040.1	0.884
MA0041.1	MA0041.1	0.135
MA0042.1	MA0042.1	0.713
MA0043.1	MA0043.1	0.663
MA0046.1	MA0046.1	0.333
MA0047.2	MA0047.2	0.183
MA0048.1	MA0048.1	0.472
MA0050.1	MA0050.1	1.45038e-11
MA0051.1	MA0051.1	1.28158e-5
MA0052.1	MA0052.1	0.0991
MA0055.1	MA0055.1	0.617
MA0057.1	MA0057.1	0.814
MA0058.1	MA0058.1	0.235
MA0059.1	MA0059.1	0.343
MA0060.1	MA0060.1	0.584
MA0061.1	MA0061.1	5.7299e-5
MA0062.2	MA0062.2	2.85816e-15
MA0065.2	MA0065.2	0.0188
MA0066.1	MA0066.1	0.249
MA0067.1	MA0067.1	0.563
MA0068.1	MA0068.1	0.364
MA0069.1	MA0069.1	0.265
MA0070.1	MA0070.1	0.467
MA0071.1	MA0071.1	0.595
MA0072.1	MA0072.1	0.611
MA0073.1	MA0073.1	0.451
MA0074.1	MA0074.1	0.666
MA0076.1	MA0076.1	6.66016e-9
MA0077.1	MA0077.1	0.274
MA0078.1	MA0078.1	0.699
MA0079.2	MA0079.2	0.518
MA0080.2	MA0080.2	2.80955e-12
MA0081.1	MA0081.1	6.61575e-4
MA0083.1	MA0083.1	0.073
MA0084.1	MA0084.1	0.521
MA0087.1	MA0087.1	0.6
MA0088.1	MA0088.1	0.115
MA0090.1	MA0090.1	1.14564e-4
MA0091.1	MA0091.1	0.5
MA0092.1	MA0092.1	0.999
MA0093.1	MA0093.1	0.456
MA0099.2	MA0099.2	8.53768e-5
MA0100.1	MA0100.1	0.213
MA0101.1	MA0101.1	0.00456
MA0102.2	MA0102.2	0.441
MA0103.1	MA0103.1	0.00407
MA0104.2	MA0104.2	0.139
MA0105.1	MA0105.1	5.77482e-7
MA0106.1	MA0106.1	0.419
MA0107.1	MA0107.1	0.00305
MA0108.2	MA0108.2	8.38861e-8
MA0111.1	MA0111.1	0.342
MA0112.2	MA0112.2	0.0115
MA0113.1	MA0113.1	0.959
MA0114.1	MA0114.1	0.0633
MA0115.1	MA0115.1	0.321
MA0116.1	MA0116.1	1.68915e-5
MA0117.1	MA0117.1	0.822
MA0119.1	MA0119.1	0.62
MA0122.1	MA0122.1	0.296
MA0124.1	MA0124.1	0.833
MA0125.1	MA0125.1	0.963
MA0131.1	MA0131.1	0.16
MA0135.1	MA0135.1	0.0553
MA0136.1	MA0136.1	1.2912e-18
MA0137.2	MA0137.2	0.456
MA0138.2	MA0138.2	0.375
MA0139.1	MA0139.1	0.165
MA0140.1	MA0140.1	0.135
MA0141.1	MA0141.1	0.844
MA0142.1	MA0142.1	0.114
MA0143.1	MA0143.1	0.913
MA0144.1	MA0144.1	0.884
MA0145.1	MA0145.1	0.963
MA0146.1	MA0146.1	0.205
MA0147.1	MA0147.1	0.144
MA0148.1	MA0148.1	0.829
MA0149.1	MA0149.1	0.0875
MA0150.1	MA0150.1	0.596
MA0152.1	MA0152.1	0.199
MA0153.1	MA0153.1	0.0792
MA0154.1	MA0154.1	2.98064e-4
MA0155.1	MA0155.1	0.796
MA0156.1	MA0156.1	2.16551e-15
MA0157.1	MA0157.1	0.0711
MA0159.1	MA0159.1	0.0345
MA0160.1	MA0160.1	0.343
MA0162.1	MA0162.1	0.754
MA0163.1	MA0163.1	3.57029e-9
MA0164.1	MA0164.1	0.913
MA0258.1	MA0258.1	0.077
MA0259.1	MA0259.1	0.508

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12185

Novel motif	Logo	P-value
1	1	0.0937
10	10	0.0493
100	100	0.595
101	101	0.392
102	102	0.68
103	103	0.113
104	104	0.174
105	105	0.262
106	106	0.663
107	107	0.361
108	108	0.362
109	109	0.0587
11	11	0.087
110	110	0.199
111	111	0.104
112	112	0.239
113	113	0.0365
114	114	0.354
115	115	0.817
116	116	0.864
117	117	0.00231
118	118	0.2
119	119	0.998
12	12	0.816
120	120	0.561
121	121	0.356
122	122	0.32
123	123	0.103
124	124	0.0984
125	125	0.346
126	126	0.11
127	127	0.533
128	128	0.558
129	129	0.718
13	13	0.402
130	130	0.358
131	131	0.716
132	132	0.346
133	133	0.00482
134	134	0.523
135	135	0.342
136	136	0.416
137	137	0.0633
138	138	0.355
139	139	0.0702
14	14	0.359
140	140	0.672
141	141	0.253
142	142	0.72
143	143	0.0369
144	144	0.752
145	145	0.211
146	146	0.163
147	147	0.0815
148	148	0.143
149	149	0.53
15	15	0.207
150	150	0.711
151	151	0.439
152	152	0.856
153	153	0.65
154	154	0.776
155	155	0.00795
156	156	0.385
157	157	0.263
158	158	0.141
159	159	0.184
16	16	0.98
160	160	0.284
161	161	0.114
162	162	0.993
163	163	0.206
164	164	0.596
165	165	0.255
166	166	0.258
167	167	0.14
168	168	0.147
169	169	0.443
17	17	0.94
18	18	0.548
19	19	0.883
2	2	0.972
20	20	0.792
21	21	0.816
22	22	0.725
23	23	0.695
24	24	0.321
25	25	0.0353
26	26	0.182
27	27	0.242
28	28	0.513
29	29	0.0668
3	3	0.0371
30	30	0.454
31	31	0.732
32	32	0.27
33	33	0.376
34	34	0.755
35	35	0.174
36	36	0.0252
37	37	0.11
38	38	0.364
39	39	0.52
4	4	0.576
40	40	0.154
41	41	0.177
42	42	0.0822
43	43	0.155
44	44	0.391
45	45	0.88
46	46	0.203
47	47	0.0738
48	48	0.111
49	49	0.122
5	5	0.307
50	50	0.978
51	51	0.463
52	52	0.448
53	53	0.376
54	54	0.844
55	55	0.119
56	56	0.591
57	57	0.63
58	58	0.0161
59	59	0.266
6	6	0.848
60	60	0.582
61	61	0.0294
62	62	0.0178
63	63	0.681
64	64	0.214
65	65	0.565
66	66	0.712
67	67	0.361
68	68	0.729
69	69	0.757
7	7	0.123
70	70	0.128
71	71	0.0497
72	72	0.0401
73	73	0.504
74	74	0.372
75	75	0.00773
76	76	0.0891
77	77	0.812
78	78	0.146
79	79	0.443
8	8	0.538
80	80	0.00255
81	81	0.183
82	82	0.0824
83	83	0.561
84	84	0.329
85	85	0.813
86	86	0.105
87	87	0.0965
88	88	0.723
89	89	0.829
9	9	0.363
90	90	0.0475
91	91	0.842
92	92	0.546
93	93	0.736
94	94	0.0357
95	95	0.00616
96	96	0.501
97	97	0.556
98	98	0.0864
99	99	0.103

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12185

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000025 CD19-positive B cell sample
FF:0000210 human sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
+|DRA_sample_Accession=RNA-Seq@SAMD00013675
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000236,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000826,CL:0000837,CL:0000838,CL:0000945,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371
+|accession_numbers=CAGE;DRX008056;DRR008928;DRZ000353;DRZ001738;DRZ011703;DRZ013088!RNA-Seq;DRX012345;DRR013793;DRZ002994;
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.54!343.08!IRF8;;chr19:50922187..50922204,+!p1@SPIB!2.46!288.22!SPIB;;chr2:100759010..100759035,-!p1@AFF3!2.39!243.26!AFF3;;chr11:111249993..111250006,-!p1@POU2AF1!2.35!224.76!POU2AF1;;chr11:47400078..47400106,-!p1@SPI1!2.12!129.56!SPI1;;chr6:391743..391759,+!p1@IRF4!2.09!122.95!IRF4;;chr2:231090433..231090469,+!p1@SP140!2.07!117.67!SP140;;chr2:100759037..100759058,-!p2@AFF3!2.06!114.36!AFF3;;chr6:91006518..91006570,-!p1@BACH2!2.04!239.96!BACH2;;chr2:231090471..231090504,+!p2@SP140!1.95!87.92!SP140;;chr17:38020392..38020477,-!p1@IKZF3!1.89!76.68!IKZF3;;chr5:88178983..88179012,-!p1@MEF2C!1.82!476.61!MEF2C;;chr2:68592406..68592424,+!p1@PLEK!1.77!57.51!PLEK;;chr2:100758991..100759009,-!p3@AFF3!1.76!56.85!AFF3;;chr8:86099884..86099918,+!p4@E2F5!1.76!56.19!E2F5;;chr3:71355163..71355209,-!p5@FOXP1!1.74!74.70!FOXP1;;chr6:91006575..91006602,-!p2@BACH2!1.72!75.36!BACH2;;chr3:32023232..32023273,+!p1@ZNF860!1.69!68.09!ZNF860;;chr2:60780607..60780624,-!p2@BCL11A!1.64!127.58!BCL11A;;chr19:16435625..16435682,+!p1@KLF2!1.59!1160.13!KLF2;;chr20:56195474..56195506,-!p1@ZBP1!1.58!37.02!ZBP1;;chr19:13213662..13213686,-!p1@LYL1!1.55!50.24!LYL1;;chr7:50344251..50344288,+!p3@IKZF1!1.55!34.37!IKZF1;;chr8:86089627..86089653,+!p3@E2F5!1.54!38.34!E2F5;;chr2:68592394..68592405,+!p2@PLEK!1.51!31.07!PLEK;;chr17:38020557..38020572,-!p4@IKZF3!1.51!31.07!IKZF3;;chr7:50343634..50343717,+!p2@IKZF1!1.50!30.41!IKZF1;;chr5:158526756..158526797,-!p3@EBF1!1.47!28.42!EBF1;;chr4:57522513..57522548,-!p4@HOPX!1.47!28.42!HOPX;;chr2:60781201..60781258,-!p3@BCL11A!1.46!27.76!BCL11A;;chr3:71409904..71409927,-!p46@FOXP1!1.44!26.44!FOXP1;;chr7:50344289..50344323,+!p1@IKZF1!1.44!26.44!IKZF1;;chr13:41593425..41593480,-!p1@ELF1!1.40!148.07!ELF1;;chr10:94449703..94449718,+!p1@HHEX!1.37!83.95!HHEX;;chr18:52989031..52989079,-!p2@TCF4!1.36!50.24!TCF4;;chr8:86089531..86089544,+!p7@E2F5!1.36!21.81!E2F5;;chr14:69262947..69262986,-!p3@ZFP36L1!1.35!25.78!ZFP36L1;;chr2:60778035..60778060,-!p4@BCL11A!1.35!25.78!BCL11A;;chr2:231090344..231090361,-!p3@SP110!1.29!18.51!SP110;;chr1:151319654..151319698,-!p2@RFX5!1.27!37.68!RFX5;;chr4:185395633..185395651,-!p2@IRF2!1.26!27.10!IRF2;;chr19:13213704..13213726,-!p3@LYL1!1.26!22.48!LYL1;;chr5:88179017..88179046,-!p2@MEF2C!1.24!64.78!MEF2C;;chr9:37034186..37034216,-!p2@PAX5!1.24!16.53!PAX5;;chr2:100759060..100759073,-!p8@AFF3!1.23!15.87!AFF3;;chr19:36391434..36391450,-!p1@NFKBID!1.22!30.41!NFKBID;;chr3:71631151..71631194,-!p15@FOXP1!1.21!17.19!FOXP1;;chr17:37934204..37934241,-!p3@IKZF3!1.21!15.20!IKZF3;;chr19:45579725..45579743,-!p1@ZNF296!1.18!62.80!ZNF296;;chr1:25256756..25256774,-!p1@RUNX3!1.17!25.78!RUNX3;;chr11:47400062..47400077,-!p2@SPI1!1.17!13.88!SPI1;;chr7:50348268..50348366,+!p4@IKZF1!1.15!13.22!IKZF1;;chr11:128563948..128564003,+!p1@FLI1!1.14!152.04!FLI1;;chr19:58220517..58220583,-!p1@ZNF154!1.13!39.66!ZNF154;;chr2:61108695..61108753,+!p1@REL!1.12!83.95!REL;;chr7:64838786..64838809,+!p2@ZNF92!1.12!69.41!ZNF92;;chr20:50159198..50159299,-!p1@NFATC2!1.12!17.85!NFATC2;;chr3:18486354..18486377,-!p2@SATB1!1.12!15.20!SATB1;;chr4:185395590..185395627,-!p3@IRF2!1.12!15.20!IRF2;;chr19:42636586..42636607,-!p1@POU2F2!1.10!32.39!POU2F2;;chr14:75988771..75988826,+!p1@BATF!1.09!15.20!BATF;;chr17:38020481..38020506,-!p7@IKZF3!1.09!11.24!IKZF3;;chr7:64126535..64126559,+!p2@ZNF107!1.07!23.14!ZNF107;;chr5:88179195..88179224,-!p3@MEF2C!1.07!17.19!MEF2C;;chr10:104154246..104154347,+!p3@NFKB2!1.06!64.12!NFKB2;;chr10:94449675..94449694,+!p2@HHEX!1.06!28.42!HHEX;;chr6:91006503..91006517,-!p3@BACH2!1.06!10.58!BACH2;;chr7:63505799..63505904,+!p1@ZNF727!1.06!10.58!ZNF727;;chr2:61108650..61108687,+!p2@REL!1.05!50.90!REL;;chr9:117150254..117150271,-!p1@AKNA!1.05!28.42!AKNA;;chr5:158526709..158526741,-!p7@EBF1!1.04!9.92!EBF1;;chr9:37027156..37027193,-!p4@PAX5!1.04!9.92!PAX5;;chr4:81104895..81104920,+!p2@PRDM8!1.03!14.54!PRDM8;;chr6:144385698..144385742,-!p2@PLAGL1!1.03!11.90!PLAGL1;;chr7:50343895..50343936,+!p5@IKZF1!1.01!9.25!IKZF1;;chr3:18487057..18487105,-!p4@SATB1!1.01!9.25!SATB1;;chr17:38020516..38020544,-!p5@IKZF3!1.01!9.25!IKZF3;;chr19:36204309..36204335,+!p1@ZBTB32!1.01!9.25!ZBTB32;;chr1:167298300..167298319,+!p2@POU2F1!1.01!9.25!POU2F1;;chr19:20748574..20748599,-!p1@ZNF737!1.00!54.87!ZNF737;;chr9:3525727..3525828,-!p2@RFX3!0.99!23.14!RFX3;;chrX:106960180..106960197,-!p2@TSC22D3!0.98!33.71!TSC22D3;;chr21:36421535..36421610,-!p2@RUNX1!0.98!31.07!RUNX1;;chr9:37003148..37003152,-!p5@PAX5!0.98!8.59!PAX5;;chr8:86089498..86089519,+!p6@E2F5!0.98!8.59!E2F5;;chr17:38020607..38020621,-!p9@IKZF3!0.98!8.59!IKZF3;;chr19:22193731..22193751,-!p1@ZNF208!0.98!8.59!ZNF208;;chr14:69263043..69263069,-!p8@ZFP36L1!0.98!8.59!ZFP36L1;;chrX:106960221..106960236,-!p3@TSC22D3!0.97!23.80!TSC22D3;;chrX:101186981..101187030,-!p1@ZMAT1!0.96!27.10!ZMAT1;;chr2:231084659..231084721,-!p1@SP110!0.95!192.36!SP110;;chr19:11959532..11959593,+!p1@ZNF439!0.95!31.07!ZNF439;;chr6:157098579..157098634,+!p4@ARID1B!0.95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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000236;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
+|ffid_belonging_in_development=CL:0000134,CL:0000051
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation2.CNhs12185.12209-129D4.hg38.nobarcode.ctss.bed.gz
 |id=FF:12209-129D4
-|is_a=EFO:0002091;;FF:0000002;;FF:0000025;;FF:0000210
+|is_a=EFO:0002091;;FF:0000025;;FF:0000210
+|is_obsolete=
+|library_id=CNhs12185!RDhi10011
+|library_id_phase_based=2:CNhs12185
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12209
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12209
 |name=CD19+ B Cells (pluriselect), donor090612, donation2
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12185,LSID975,release011,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=129
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=2.15973
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.49200945693648e-215!GO:0043227;membrane-bound organelle;5.2434390543556e-199!GO:0043231;intracellular membrane-bound organelle;1.10375386657901e-198!GO:0043226;organelle;1.43148006838639e-182!GO:0043229;intracellular organelle;6.03336042945939e-182!GO:0005737;cytoplasm;2.05023039382165e-129!GO:0044422;organelle part;8.3667847752842e-113!GO:0044446;intracellular organelle part;5.06107268288213e-111!GO:0005634;nucleus;1.09773414606324e-99!GO:0044444;cytoplasmic part;2.03153275043044e-98!GO:0032991;macromolecular complex;5.42325718903467e-98!GO:0044237;cellular metabolic process;1.25941990551719e-92!GO:0043170;macromolecule metabolic process;3.60743583504738e-91!GO:0044238;primary metabolic process;3.79468918845677e-88!GO:0030529;ribonucleoprotein complex;9.53076749745806e-88!GO:0003723;RNA binding;4.00425793858517e-78!GO:0044428;nuclear part;9.74153148074265e-78!GO:0043233;organelle lumen;2.1771823769414e-69!GO:0031974;membrane-enclosed lumen;2.1771823769414e-69!GO:0010467;gene expression;3.84066178013215e-66!GO:0043283;biopolymer metabolic process;7.4810723553124e-64!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.02536241680058e-60!GO:0005739;mitochondrion;1.536394254018e-59!GO:0006396;RNA processing;3.59341278280779e-56!GO:0006412;translation;9.28072201654652e-55!GO:0005840;ribosome;1.49278877582102e-49!GO:0043234;protein complex;5.72596017877811e-48!GO:0031981;nuclear lumen;5.88812880683955e-47!GO:0016071;mRNA metabolic process;1.2546279178363e-44!GO:0005515;protein binding;1.59550168223012e-43!GO:0033036;macromolecule localization;3.91413362662263e-43!GO:0003676;nucleic acid binding;2.49293443230113e-42!GO:0003735;structural constituent of ribosome;2.95554108793577e-42!GO:0044429;mitochondrial part;3.6594493964182e-42!GO:0015031;protein transport;1.46639092005815e-41!GO:0045184;establishment of protein localization;1.72550895581042e-40!GO:0019538;protein metabolic process;2.62177408181538e-40!GO:0009059;macromolecule biosynthetic process;4.91331022159056e-40!GO:0008380;RNA splicing;4.91331022159056e-40!GO:0008104;protein localization;1.64819506002071e-39!GO:0031090;organelle membrane;3.02230418901603e-39!GO:0044267;cellular protein metabolic process;2.0824594022869e-38!GO:0031967;organelle envelope;2.8813772732144e-38!GO:0006397;mRNA processing;6.18906863964883e-38!GO:0031975;envelope;6.18906863964883e-38!GO:0033279;ribosomal subunit;9.2109400291184e-38!GO:0044260;cellular macromolecule metabolic process;1.11824366447231e-37!GO:0016070;RNA metabolic process;1.09552477472399e-35!GO:0009058;biosynthetic process;7.48947447036937e-33!GO:0044249;cellular biosynthetic process;8.05257161496362e-33!GO:0005829;cytosol;2.16498662733411e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.49115726570682e-31!GO:0005654;nucleoplasm;4.340308389192e-31!GO:0005681;spliceosome;1.5580306719992e-29!GO:0006259;DNA metabolic process;9.51449849596126e-29!GO:0046907;intracellular transport;2.38706017400822e-28!GO:0065003;macromolecular complex assembly;2.65980245229421e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.16432978643099e-28!GO:0006886;intracellular protein transport;3.36473887971869e-26!GO:0044445;cytosolic part;7.43363634649968e-26!GO:0005740;mitochondrial envelope;1.08236650486931e-25!GO:0019866;organelle inner membrane;1.56488025901059e-25!GO:0016043;cellular component organization and biogenesis;9.52568806388815e-25!GO:0022607;cellular component assembly;1.64529818800208e-24!GO:0031966;mitochondrial membrane;1.96422271970567e-24!GO:0044451;nucleoplasm part;2.14414845094485e-24!GO:0005743;mitochondrial inner membrane;1.96965431655407e-23!GO:0006119;oxidative phosphorylation;3.78087895935362e-21!GO:0006996;organelle organization and biogenesis;3.95709162964728e-21!GO:0000166;nucleotide binding;2.55952178763728e-20!GO:0051649;establishment of cellular localization;3.60502225887343e-20!GO:0006512;ubiquitin cycle;5.01257013497975e-20!GO:0022618;protein-RNA complex assembly;6.29274841339173e-20!GO:0015935;small ribosomal subunit;7.93901261036388e-20!GO:0051641;cellular localization;9.45287121412374e-20!GO:0031980;mitochondrial lumen;3.75398274746479e-19!GO:0005759;mitochondrial matrix;3.75398274746479e-19!GO:0015934;large ribosomal subunit;6.10194653134645e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.74808625749388e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.00623432896942e-18!GO:0044455;mitochondrial membrane part;2.25030356595552e-18!GO:0044265;cellular macromolecule catabolic process;2.30701617183904e-18!GO:0016462;pyrophosphatase activity;2.54903595131729e-18!GO:0017111;nucleoside-triphosphatase activity;4.17184253659737e-18!GO:0008134;transcription factor binding;7.87613441596806e-18!GO:0005730;nucleolus;9.5495684738023e-18!GO:0016874;ligase activity;1.11864803404362e-17!GO:0019941;modification-dependent protein catabolic process;1.73748839959452e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.73748839959452e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.14572300893142e-17!GO:0006511;ubiquitin-dependent protein catabolic process;3.30160399171225e-17!GO:0044257;cellular protein catabolic process;4.18554393159071e-17!GO:0043228;non-membrane-bound organelle;5.53397527287735e-17!GO:0043232;intracellular non-membrane-bound organelle;5.53397527287735e-17!GO:0043285;biopolymer catabolic process;6.20180258547018e-17!GO:0006974;response to DNA damage stimulus;7.83427054946512e-17!GO:0016604;nuclear body;1.97199554437221e-16!GO:0005746;mitochondrial respiratory chain;6.71077532730584e-16!GO:0006457;protein folding;1.01643771385698e-15!GO:0006605;protein targeting;2.4650829478988e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.84352423649432e-15!GO:0012501;programmed cell death;3.54173642282973e-15!GO:0006915;apoptosis;3.63170253644656e-15!GO:0008135;translation factor activity, nucleic acid binding;6.13643234450916e-15!GO:0009057;macromolecule catabolic process;7.20429867100455e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;9.37431593019223e-15!GO:0000375;RNA splicing, via transesterification reactions;9.37431593019223e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.37431593019223e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.40657338378964e-14!GO:0006281;DNA repair;1.90456634119348e-14!GO:0032553;ribonucleotide binding;2.66918760763377e-14!GO:0032555;purine ribonucleotide binding;2.66918760763377e-14!GO:0005761;mitochondrial ribosome;3.49105608133829e-14!GO:0000313;organellar ribosome;3.49105608133829e-14!GO:0012505;endomembrane system;3.96589963964338e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.58677967470266e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;5.21220758019589e-14!GO:0051276;chromosome organization and biogenesis;5.79970735570136e-14!GO:0017076;purine nucleotide binding;5.85664606332197e-14!GO:0050136;NADH dehydrogenase (quinone) activity;9.46799294316238e-14!GO:0003954;NADH dehydrogenase activity;9.46799294316238e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.46799294316238e-14!GO:0043412;biopolymer modification;1.19201217857253e-13!GO:0050794;regulation of cellular process;1.51032111896736e-13!GO:0008219;cell death;1.56139261258131e-13!GO:0016265;death;1.56139261258131e-13!GO:0006323;DNA packaging;2.21140303737048e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.41087872088256e-13!GO:0016887;ATPase activity;2.46520187501371e-13!GO:0005635;nuclear envelope;2.86828290647763e-13!GO:0030163;protein catabolic process;2.9094454518402e-13!GO:0042623;ATPase activity, coupled;3.65229229797896e-13!GO:0019222;regulation of metabolic process;3.905292187756e-13!GO:0031965;nuclear membrane;7.35262572182506e-13!GO:0016607;nuclear speck;1.01875908459316e-12!GO:0044248;cellular catabolic process;1.40051455563688e-12!GO:0042254;ribosome biogenesis and assembly;1.49507816208446e-12!GO:0005524;ATP binding;2.25911526879869e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.39975895368291e-12!GO:0042773;ATP synthesis coupled electron transport;2.39975895368291e-12!GO:0006413;translational initiation;3.56815581492613e-12!GO:0006913;nucleocytoplasmic transport;4.72902943914999e-12!GO:0032559;adenyl ribonucleotide binding;5.57207581254999e-12!GO:0003712;transcription cofactor activity;7.22712401680205e-12!GO:0051169;nuclear transport;7.70173751964424e-12!GO:0030964;NADH dehydrogenase complex (quinone);7.73313564055596e-12!GO:0045271;respiratory chain complex I;7.73313564055596e-12!GO:0005747;mitochondrial respiratory chain complex I;7.73313564055596e-12!GO:0005694;chromosome;1.07202616455051e-11!GO:0006446;regulation of translational initiation;1.43046791118274e-11!GO:0030554;adenyl nucleotide binding;1.64421880633334e-11!GO:0006464;protein modification process;2.04105153834288e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.17903617704847e-11!GO:0031323;regulation of cellular metabolic process;2.60827367449209e-11!GO:0003743;translation initiation factor activity;3.05594017386535e-11!GO:0008639;small protein conjugating enzyme activity;3.60174576171975e-11!GO:0004842;ubiquitin-protein ligase activity;6.04657790001624e-11!GO:0051082;unfolded protein binding;7.41266301534947e-11!GO:0051186;cofactor metabolic process;8.19049530895784e-11!GO:0009719;response to endogenous stimulus;1.27032793935999e-10!GO:0042981;regulation of apoptosis;1.59014514900377e-10!GO:0043687;post-translational protein modification;1.94405261657322e-10!GO:0048193;Golgi vesicle transport;1.98925599994076e-10!GO:0044453;nuclear membrane part;2.22902741826179e-10!GO:0043067;regulation of programmed cell death;2.28307466293347e-10!GO:0048770;pigment granule;2.44374146745995e-10!GO:0042470;melanosome;2.44374146745995e-10!GO:0004386;helicase activity;2.81437758744283e-10!GO:0019787;small conjugating protein ligase activity;4.30065962353087e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.82181095659493e-10!GO:0006333;chromatin assembly or disassembly;4.9708191819113e-10!GO:0016568;chromatin modification;5.82215937162715e-10!GO:0044427;chromosomal part;7.09432488326855e-10!GO:0008026;ATP-dependent helicase activity;7.17020045403396e-10!GO:0006399;tRNA metabolic process;7.45853222763666e-10!GO:0007049;cell cycle;8.34766968954958e-10!GO:0017038;protein import;1.24376814802293e-09!GO:0006350;transcription;1.31390700450575e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.46135616383621e-09!GO:0015078;hydrogen ion transmembrane transporter activity;1.73079368498172e-09!GO:0009259;ribonucleotide metabolic process;1.97129866844119e-09!GO:0010468;regulation of gene expression;1.97129866844119e-09!GO:0006403;RNA localization;2.21498821184738e-09!GO:0050657;nucleic acid transport;2.59518404312727e-09!GO:0051236;establishment of RNA localization;2.59518404312727e-09!GO:0050658;RNA transport;2.59518404312727e-09!GO:0065004;protein-DNA complex assembly;2.72195878293309e-09!GO:0016072;rRNA metabolic process;3.08174948153563e-09!GO:0005643;nuclear pore;3.12927720227197e-09!GO:0006164;purine nucleotide biosynthetic process;3.23061947832742e-09!GO:0019829;cation-transporting ATPase activity;4.24268808721492e-09!GO:0009260;ribonucleotide biosynthetic process;4.32826459442442e-09!GO:0006364;rRNA processing;4.33463842893555e-09!GO:0006163;purine nucleotide metabolic process;4.73533103738577e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.85279174127895e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.06924810385601e-09!GO:0005839;proteasome core complex (sensu Eukaryota);7.9527602599232e-09!GO:0006732;coenzyme metabolic process;8.26834063164996e-09!GO:0005794;Golgi apparatus;8.64288298760557e-09!GO:0009152;purine ribonucleotide biosynthetic process;9.89739453429782e-09!GO:0050789;regulation of biological process;1.15943252950037e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.36536478181627e-08!GO:0009150;purine ribonucleotide metabolic process;1.53074882192876e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.76434038882359e-08!GO:0044432;endoplasmic reticulum part;1.79282954889516e-08!GO:0043566;structure-specific DNA binding;1.93102267107302e-08!GO:0051246;regulation of protein metabolic process;1.937112771967e-08!GO:0003713;transcription coactivator activity;2.04128296815326e-08!GO:0005783;endoplasmic reticulum;2.15821067444149e-08!GO:0016192;vesicle-mediated transport;2.55908560343042e-08!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.58117369138063e-08!GO:0015986;ATP synthesis coupled proton transport;2.9839273903101e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.9839273903101e-08!GO:0065002;intracellular protein transport across a membrane;3.4994757549568e-08!GO:0016881;acid-amino acid ligase activity;3.58447241316111e-08!GO:0004298;threonine endopeptidase activity;4.14957079151734e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.73617051056691e-08!GO:0051028;mRNA transport;8.82596254056866e-08!GO:0000785;chromatin;1.14000573036226e-07!GO:0008270;zinc ion binding;1.30575987471979e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.3099894691466e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.60762214677488e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.60762214677488e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.61704652720395e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.61704652720395e-07!GO:0046930;pore complex;1.61834084319879e-07!GO:0008565;protein transporter activity;1.84067381750722e-07!GO:0003697;single-stranded DNA binding;2.03918049097376e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.20199467895763e-07!GO:0032446;protein modification by small protein conjugation;2.27997006592792e-07!GO:0022402;cell cycle process;2.38430427265156e-07!GO:0000245;spliceosome assembly;2.41722010662831e-07!GO:0006754;ATP biosynthetic process;2.55642524209065e-07!GO:0006753;nucleoside phosphate metabolic process;2.55642524209065e-07!GO:0016787;hydrolase activity;2.58684335755076e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.71027440318209e-07!GO:0009060;aerobic respiration;2.93068884629231e-07!GO:0051726;regulation of cell cycle;3.14778559065962e-07!GO:0000074;regulation of progression through cell cycle;4.06528722190263e-07!GO:0032774;RNA biosynthetic process;4.19094122275293e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.19312940765155e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.50210646202515e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.71638067047658e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.91909783634955e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.91909783634955e-07!GO:0006351;transcription, DNA-dependent;4.99994414957971e-07!GO:0005789;endoplasmic reticulum membrane;5.29506134129691e-07!GO:0016567;protein ubiquitination;5.42250248894657e-07!GO:0009141;nucleoside triphosphate metabolic process;5.50675446787138e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.52703674813785e-07!GO:0006793;phosphorus metabolic process;6.55378737168368e-07!GO:0006796;phosphate metabolic process;6.55378737168368e-07!GO:0045449;regulation of transcription;7.05730818492734e-07!GO:0006366;transcription from RNA polymerase II promoter;8.83669827107962e-07!GO:0005768;endosome;9.66650508187319e-07!GO:0009055;electron carrier activity;1.00786678403272e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.06392320610316e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.06392320610316e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.06392320610316e-06!GO:0051188;cofactor biosynthetic process;1.10644056923377e-06!GO:0009056;catabolic process;1.13478953468207e-06!GO:0046034;ATP metabolic process;1.23883481239912e-06!GO:0007243;protein kinase cascade;1.35111209423184e-06!GO:0016779;nucleotidyltransferase activity;1.43613085369399e-06!GO:0045333;cellular respiration;1.49917336665136e-06!GO:0051170;nuclear import;1.58881291662784e-06!GO:0016310;phosphorylation;1.67869909080943e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.67986748028478e-06!GO:0045259;proton-transporting ATP synthase complex;1.73984881936982e-06!GO:0000151;ubiquitin ligase complex;1.81552467752578e-06!GO:0043038;amino acid activation;2.08460561141242e-06!GO:0006418;tRNA aminoacylation for protein translation;2.08460561141242e-06!GO:0043039;tRNA aminoacylation;2.08460561141242e-06!GO:0006334;nucleosome assembly;2.1813840957238e-06!GO:0065009;regulation of a molecular function;2.20173159411418e-06!GO:0031497;chromatin assembly;2.25919713798881e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.43341653241937e-06!GO:0006606;protein import into nucleus;2.9845641123329e-06!GO:0005793;ER-Golgi intermediate compartment;3.81577173797814e-06!GO:0006260;DNA replication;4.41170189993284e-06!GO:0016563;transcription activator activity;4.51997924112846e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.58059730415112e-06!GO:0006417;regulation of translation;4.60651634616125e-06!GO:0005770;late endosome;5.81420655305788e-06!GO:0046914;transition metal ion binding;6.07564666612609e-06!GO:0006099;tricarboxylic acid cycle;6.07564666612609e-06!GO:0046356;acetyl-CoA catabolic process;6.07564666612609e-06!GO:0043069;negative regulation of programmed cell death;6.21427643294457e-06!GO:0007005;mitochondrion organization and biogenesis;6.32480965597365e-06!GO:0016564;transcription repressor activity;6.32874427351754e-06!GO:0006084;acetyl-CoA metabolic process;7.5603047046548e-06!GO:0006461;protein complex assembly;7.5603047046548e-06!GO:0009615;response to virus;9.30125823476481e-06!GO:0043066;negative regulation of apoptosis;9.43513063273231e-06!GO:0006613;cotranslational protein targeting to membrane;9.45021152312985e-06!GO:0003724;RNA helicase activity;1.07896757684143e-05!GO:0031324;negative regulation of cellular metabolic process;1.10207412611639e-05!GO:0009108;coenzyme biosynthetic process;1.10838337547556e-05!GO:0019899;enzyme binding;1.41847235561509e-05!GO:0006401;RNA catabolic process;1.682520574386e-05!GO:0016740;transferase activity;1.68910944977823e-05!GO:0006355;regulation of transcription, DNA-dependent;1.95700590772085e-05!GO:0065007;biological regulation;2.34835177825708e-05!GO:0009117;nucleotide metabolic process;2.83601625562833e-05!GO:0005773;vacuole;2.97705717593124e-05!GO:0051168;nuclear export;3.08471247740266e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.12252336264045e-05!GO:0015399;primary active transmembrane transporter activity;3.12252336264045e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.49253261536058e-05!GO:0030120;vesicle coat;3.7069634944562e-05!GO:0030662;coated vesicle membrane;3.7069634944562e-05!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;3.85477830180101e-05!GO:0044440;endosomal part;3.92841930984294e-05!GO:0010008;endosome membrane;3.92841930984294e-05!GO:0003677;DNA binding;3.93153472659543e-05!GO:0006752;group transfer coenzyme metabolic process;4.31203452018218e-05!GO:0043065;positive regulation of apoptosis;4.48269648669617e-05!GO:0009109;coenzyme catabolic process;4.59432839925122e-05!GO:0042613;MHC class II protein complex;4.69400778331474e-05!GO:0005762;mitochondrial large ribosomal subunit;4.72564231395071e-05!GO:0000315;organellar large ribosomal subunit;4.72564231395071e-05!GO:0045786;negative regulation of progression through cell cycle;5.11817328133018e-05!GO:0048523;negative regulation of cellular process;5.48057652496232e-05!GO:0048475;coated membrane;6.23565600385342e-05!GO:0030117;membrane coat;6.23565600385342e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.53593835084013e-05!GO:0006612;protein targeting to membrane;6.61068655687079e-05!GO:0043068;positive regulation of programmed cell death;6.75644450014635e-05!GO:0031326;regulation of cellular biosynthetic process;7.05921909161436e-05!GO:0051187;cofactor catabolic process;7.13620064469064e-05!GO:0006916;anti-apoptosis;7.42587969116023e-05!GO:0000323;lytic vacuole;7.60039523530286e-05!GO:0005764;lysosome;7.60039523530286e-05!GO:0016481;negative regulation of transcription;7.74699237410687e-05!GO:0005667;transcription factor complex;0.000105926341869285!GO:0000314;organellar small ribosomal subunit;0.000145882342300706!GO:0005763;mitochondrial small ribosomal subunit;0.000145882342300706!GO:0031072;heat shock protein binding;0.000155336992773063!GO:0008186;RNA-dependent ATPase activity;0.000159516484610201!GO:0008033;tRNA processing;0.000165091555669712!GO:0003714;transcription corepressor activity;0.000165091555669712!GO:0016197;endosome transport;0.000165091555669712!GO:0003924;GTPase activity;0.000180713244425119!GO:0007264;small GTPase mediated signal transduction;0.000181642795880132!GO:0043492;ATPase activity, coupled to movement of substances;0.000185162470879997!GO:0003690;double-stranded DNA binding;0.000185622269794275!GO:0006402;mRNA catabolic process;0.000187498978875443!GO:0006818;hydrogen transport;0.00019079671603682!GO:0042113;B cell activation;0.000193687152535209!GO:0009892;negative regulation of metabolic process;0.000194154339078345!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000194154339078345!GO:0005885;Arp2/3 protein complex;0.000194638336223174!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000213363871674907!GO:0005525;GTP binding;0.000223306301312841!GO:0015992;proton transport;0.000239183432233305!GO:0008654;phospholipid biosynthetic process;0.000239183432233305!GO:0044431;Golgi apparatus part;0.000240880736307103!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000247130133679434!GO:0008632;apoptotic program;0.000250081517909598!GO:0043021;ribonucleoprotein binding;0.000253102784195963!GO:0003899;DNA-directed RNA polymerase activity;0.000268653299520313!GO:0000278;mitotic cell cycle;0.000294803094664996!GO:0043681;protein import into mitochondrion;0.000307393324348647!GO:0006917;induction of apoptosis;0.000308385337886065!GO:0050790;regulation of catalytic activity;0.000315705394196138!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000343144321344079!GO:0030384;phosphoinositide metabolic process;0.000398261441157954!GO:0012502;induction of programmed cell death;0.000433604942667097!GO:0007242;intracellular signaling cascade;0.0004837775361128!GO:0004004;ATP-dependent RNA helicase activity;0.000486930454210864!GO:0009889;regulation of biosynthetic process;0.000493817824558863!GO:0003729;mRNA binding;0.00050289293262189!GO:0000786;nucleosome;0.000518377527605057!GO:0044452;nucleolar part;0.000549489266020149!GO:0022890;inorganic cation transmembrane transporter activity;0.000578429748649311!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000579797818692718!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00059235365305209!GO:0005813;centrosome;0.000596633358959745!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000602622927463386!GO:0006310;DNA recombination;0.000608812153668476!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000665357887366552!GO:0008168;methyltransferase activity;0.000680962263299068!GO:0016741;transferase activity, transferring one-carbon groups;0.000686225025367352!GO:0006261;DNA-dependent DNA replication;0.000712904210839571!GO:0051427;hormone receptor binding;0.00080223115715364!GO:0006352;transcription initiation;0.000826207894240728!GO:0048519;negative regulation of biological process;0.000868673776679677!GO:0004518;nuclease activity;0.000872671020136053!GO:0008234;cysteine-type peptidase activity;0.000960894525318419!GO:0043623;cellular protein complex assembly;0.000968265148433978!GO:0009967;positive regulation of signal transduction;0.0010241244042013!GO:0009165;nucleotide biosynthetic process;0.00105542996386122!GO:0007265;Ras protein signal transduction;0.00115938772389333!GO:0031902;late endosome membrane;0.00118449166345285!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00121188456117696!GO:0051252;regulation of RNA metabolic process;0.00131370028716205!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00137882018393936!GO:0015002;heme-copper terminal oxidase activity;0.00137882018393936!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00137882018393936!GO:0004129;cytochrome-c oxidase activity;0.00137882018393936!GO:0005815;microtubule organizing center;0.00142622229406538!GO:0016251;general RNA polymerase II transcription factor activity;0.00143930050745292!GO:0006950;response to stress;0.00145330466247612!GO:0006650;glycerophospholipid metabolic process;0.00145937189115186!GO:0035257;nuclear hormone receptor binding;0.00146714309902233!GO:0045454;cell redox homeostasis;0.00152743969920922!GO:0003725;double-stranded RNA binding;0.00158040177828166!GO:0006383;transcription from RNA polymerase III promoter;0.00162916419886222!GO:0006414;translational elongation;0.00174997113345122!GO:0007006;mitochondrial membrane organization and biogenesis;0.00188576800876235!GO:0043488;regulation of mRNA stability;0.00194036187586227!GO:0043487;regulation of RNA stability;0.00194036187586227!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00197081443552794!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00197081443552794!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00197081443552794!GO:0016363;nuclear matrix;0.00197453287860625!GO:0032561;guanyl ribonucleotide binding;0.00197453287860625!GO:0019001;guanyl nucleotide binding;0.00197453287860625!GO:0046489;phosphoinositide biosynthetic process;0.00207714445430604!GO:0051789;response to protein stimulus;0.00213854649522458!GO:0006986;response to unfolded protein;0.00213854649522458!GO:0033116;ER-Golgi intermediate compartment membrane;0.00218898254106045!GO:0000087;M phase of mitotic cell cycle;0.00224910569538612!GO:0051336;regulation of hydrolase activity;0.00229037204781786!GO:0043087;regulation of GTPase activity;0.00231080782162144!GO:0048500;signal recognition particle;0.00245893690703967!GO:0046474;glycerophospholipid biosynthetic process;0.00253444925730721!GO:0051301;cell division;0.00261080133055367!GO:0005774;vacuolar membrane;0.0027420159205815!GO:0008047;enzyme activator activity;0.00275677021706631!GO:0016859;cis-trans isomerase activity;0.00277582164125761!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0029315605095163!GO:0007067;mitosis;0.00299350258535305!GO:0005684;U2-dependent spliceosome;0.00302802020930816!GO:0007034;vacuolar transport;0.0030609638901071!GO:0045892;negative regulation of transcription, DNA-dependent;0.00313572657291745!GO:0003711;transcription elongation regulator activity;0.00323584492896733!GO:0006405;RNA export from nucleus;0.00337984331426036!GO:0004674;protein serine/threonine kinase activity;0.0034220528636869!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00352563945040462!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00352563945040462!GO:0051920;peroxiredoxin activity;0.00355113445014779!GO:0006839;mitochondrial transport;0.00378571029554384!GO:0006891;intra-Golgi vesicle-mediated transport;0.00378571029554384!GO:0008312;7S RNA binding;0.00381908946893792!GO:0000139;Golgi membrane;0.00384376814746997!GO:0002764;immune response-regulating signal transduction;0.00398633956576793!GO:0046649;lymphocyte activation;0.00409783499767279!GO:0005048;signal sequence binding;0.00415188887237871!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00415188887237871!GO:0045047;protein targeting to ER;0.00415188887237871!GO:0005769;early endosome;0.00415774996049025!GO:0048471;perinuclear region of cytoplasm;0.00421051546153109!GO:0000118;histone deacetylase complex;0.00423401990460014!GO:0003678;DNA helicase activity;0.00428121278271675!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00452326629010602!GO:0045947;negative regulation of translational initiation;0.00453911783108319!GO:0003684;damaged DNA binding;0.00455295357305897!GO:0005637;nuclear inner membrane;0.00455295357305897!GO:0004527;exonuclease activity;0.00466118243385174!GO:0005798;Golgi-associated vesicle;0.00472183403666091!GO:0016853;isomerase activity;0.0052029337240065!GO:0006611;protein export from nucleus;0.00535669368937856!GO:0022403;cell cycle phase;0.00535669368937856!GO:0032200;telomere organization and biogenesis;0.00535669368937856!GO:0000723;telomere maintenance;0.00535669368937856!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00562822083035718!GO:0044437;vacuolar part;0.00573054310142968!GO:0030695;GTPase regulator activity;0.00595409072743451!GO:0006302;double-strand break repair;0.0061553160188095!GO:0005765;lysosomal membrane;0.00619105324835509!GO:0005741;mitochondrial outer membrane;0.00622852778449297!GO:0004532;exoribonuclease activity;0.00623240419329248!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00623240419329248!GO:0005657;replication fork;0.00630116336215001!GO:0016584;nucleosome positioning;0.00642806746200304!GO:0030433;ER-associated protein catabolic process;0.00642806746200304!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00642806746200304!GO:0006289;nucleotide-excision repair;0.00655029670930119!GO:0006626;protein targeting to mitochondrion;0.00661352858307426!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00669018468780445!GO:0008408;3'-5' exonuclease activity;0.00702252362035255!GO:0002376;immune system process;0.00708340821698243!GO:0006091;generation of precursor metabolites and energy;0.00749452054491136!GO:0048522;positive regulation of cellular process;0.00758081470613583!GO:0046467;membrane lipid biosynthetic process;0.00771780775542559!GO:0031252;leading edge;0.00799207804988501!GO:0031968;organelle outer membrane;0.00876566012780462!GO:0031625;ubiquitin protein ligase binding;0.00882495655150138!GO:0005669;transcription factor TFIID complex;0.00893889775871624!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00901171776588808!GO:0046822;regulation of nucleocytoplasmic transport;0.00907330240891126!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00930007368721152!GO:0019867;outer membrane;0.00936841112618801!GO:0032940;secretion by cell;0.00938346329945944!GO:0002757;immune response-activating signal transduction;0.0094097031854823!GO:0006376;mRNA splice site selection;0.00974259490173612!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00974259490173612!GO:0030880;RNA polymerase complex;0.0101886519778606!GO:0046966;thyroid hormone receptor binding;0.0104323318083159!GO:0003746;translation elongation factor activity;0.0106720646801429!GO:0016605;PML body;0.0107145293978008!GO:0051087;chaperone binding;0.0107809271001044!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0108514980260773!GO:0030658;transport vesicle membrane;0.0108724473016593!GO:0047485;protein N-terminus binding;0.0111864455938179!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0112425037450564!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0112425037450564!GO:0051539;4 iron, 4 sulfur cluster binding;0.0112955932640394!GO:0006607;NLS-bearing substrate import into nucleus;0.0113269203378745!GO:0045321;leukocyte activation;0.0115560302374841!GO:0015980;energy derivation by oxidation of organic compounds;0.0120187902553887!GO:0016272;prefoldin complex;0.012322393123007!GO:0009451;RNA modification;0.0125229727611482!GO:0009116;nucleoside metabolic process;0.0129498502427548!GO:0050851;antigen receptor-mediated signaling pathway;0.0132556349044499!GO:0007041;lysosomal transport;0.0135732304374495!GO:0043281;regulation of caspase activity;0.0136167530316625!GO:0019883;antigen processing and presentation of endogenous antigen;0.0140136142728113!GO:0043022;ribosome binding;0.0145587310379051!GO:0051052;regulation of DNA metabolic process;0.0145715190139358!GO:0042802;identical protein binding;0.0147108714928077!GO:0000781;chromosome, telomeric region;0.0149380246350317!GO:0030518;steroid hormone receptor signaling pathway;0.0149717072479568!GO:0019843;rRNA binding;0.0150788642021795!GO:0006595;polyamine metabolic process;0.0156141914835114!GO:0060090;molecular adaptor activity;0.015749035719213!GO:0030258;lipid modification;0.0162130421052782!GO:0019882;antigen processing and presentation;0.0165690113617343!GO:0045045;secretory pathway;0.0168733320691162!GO:0032259;methylation;0.0170012129185206!GO:0030663;COPI coated vesicle membrane;0.0171119679549544!GO:0030126;COPI vesicle coat;0.0171119679549544!GO:0015631;tubulin binding;0.0175762862447227!GO:0030137;COPI-coated vesicle;0.0175762862447227!GO:0000279;M phase;0.017877906714361!GO:0019783;small conjugating protein-specific protease activity;0.018139610970845!GO:0006506;GPI anchor biosynthetic process;0.0182920006699645!GO:0000049;tRNA binding;0.0188259167192111!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0190761558789102!GO:0000428;DNA-directed RNA polymerase complex;0.0190761558789102!GO:0030521;androgen receptor signaling pathway;0.0192706309665787!GO:0030118;clathrin coat;0.0198287199208004!GO:0031901;early endosome membrane;0.0201825310454831!GO:0032395;MHC class II receptor activity;0.0203021052733471!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.02062995247851!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.02062995247851!GO:0032318;regulation of Ras GTPase activity;0.0209452008237862!GO:0048002;antigen processing and presentation of peptide antigen;0.0211575023346385!GO:0006284;base-excision repair;0.0217527699542072!GO:0030041;actin filament polymerization;0.0217906297457194!GO:0008097;5S rRNA binding;0.0226176015630259!GO:0030660;Golgi-associated vesicle membrane;0.0226251798423456!GO:0004843;ubiquitin-specific protease activity;0.0228721902975971!GO:0000738;DNA catabolic process, exonucleolytic;0.0230248590140232!GO:0006338;chromatin remodeling;0.0231389403650547!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0231788943370529!GO:0004197;cysteine-type endopeptidase activity;0.0232541166189215!GO:0042824;MHC class I peptide loading complex;0.0232541166189215!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0239297015995715!GO:0006919;caspase activation;0.0239435406343586!GO:0005869;dynactin complex;0.0240961590548086!GO:0051098;regulation of binding;0.0241239185078952!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.025797394396935!GO:0006497;protein amino acid lipidation;0.0259761857500643!GO:0050871;positive regulation of B cell activation;0.0262421768428744!GO:0008139;nuclear localization sequence binding;0.0265311639476189!GO:0008094;DNA-dependent ATPase activity;0.0265607904518783!GO:0045730;respiratory burst;0.0265607904518783!GO:0043414;biopolymer methylation;0.0267530492006421!GO:0031124;mRNA 3'-end processing;0.0269201787275014!GO:0006505;GPI anchor metabolic process;0.0270058406955831!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0271700245392971!GO:0010257;NADH dehydrogenase complex assembly;0.0271700245392971!GO:0033108;mitochondrial respiratory chain complex assembly;0.0271700245392971!GO:0006672;ceramide metabolic process;0.0272258770062294!GO:0050853;B cell receptor signaling pathway;0.028214061558986!GO:0030867;rough endoplasmic reticulum membrane;0.028237633082203!GO:0048487;beta-tubulin binding;0.0282669679010085!GO:0015923;mannosidase activity;0.028365317678409!GO:0006914;autophagy;0.0285957538450473!GO:0000178;exosome (RNase complex);0.0286164131086217!GO:0019814;immunoglobulin complex;0.0288854165445686!GO:0019815;B cell receptor complex;0.0288854165445686!GO:0046979;TAP2 binding;0.0288854165445686!GO:0046977;TAP binding;0.0288854165445686!GO:0046978;TAP1 binding;0.0288854165445686!GO:0005832;chaperonin-containing T-complex;0.030198748374314!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0303853375744609!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0306448399244096!GO:0004003;ATP-dependent DNA helicase activity;0.0307921807629755!GO:0005521;lamin binding;0.031150259740927!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0311579966231314!GO:0018193;peptidyl-amino acid modification;0.0312964477680294!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0312964477680294!GO:0051223;regulation of protein transport;0.0314599940649689!GO:0005096;GTPase activator activity;0.0315906398413948!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0319160900933787!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0319160900933787!GO:0005083;small GTPase regulator activity;0.0319499905960148!GO:0008017;microtubule binding;0.0319499905960148!GO:0008538;proteasome activator activity;0.0320377513878072!GO:0004576;oligosaccharyl transferase activity;0.0324829836083389!GO:0000287;magnesium ion binding;0.0328983916084415!GO:0004540;ribonuclease activity;0.032919464069202!GO:0006516;glycoprotein catabolic process;0.0329198466275779!GO:0051092;activation of NF-kappaB transcription factor;0.0332095906900416!GO:0031647;regulation of protein stability;0.0332868500670651!GO:0051540;metal cluster binding;0.0335027281586501!GO:0051536;iron-sulfur cluster binding;0.0335027281586501!GO:0004722;protein serine/threonine phosphatase activity;0.0337758829695683!GO:0009112;nucleobase metabolic process;0.0342419719033589!GO:0000175;3'-5'-exoribonuclease activity;0.0342762848329845!GO:0000339;RNA cap binding;0.0349248915714836!GO:0009161;ribonucleoside monophosphate metabolic process;0.0358184341797552!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0358184341797552!GO:0051251;positive regulation of lymphocyte activation;0.0362481473520244!GO:0008250;oligosaccharyl transferase complex;0.0365383746629833!GO:0004221;ubiquitin thiolesterase activity;0.0366096870547941!GO:0000209;protein polyubiquitination;0.0374511860474532!GO:0007004;telomere maintenance via telomerase;0.0376626037807478!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0376705865145708!GO:0000123;histone acetyltransferase complex;0.0387553975491605!GO:0009607;response to biotic stimulus;0.0391666406679519!GO:0000119;mediator complex;0.0391699485634348!GO:0031123;RNA 3'-end processing;0.0399242824444082!GO:0008180;signalosome;0.0402216250607561!GO:0000303;response to superoxide;0.0404141466827014!GO:0043596;nuclear replication fork;0.0405224676097429!GO:0022406;membrane docking;0.0407210192540216!GO:0048278;vesicle docking;0.0407210192540216!GO:0043280;positive regulation of caspase activity;0.0411625829678959!GO:0051059;NF-kappaB binding;0.0416980879789849!GO:0007040;lysosome organization and biogenesis;0.0417322383140023!GO:0000059;protein import into nucleus, docking;0.0420463358857773!GO:0007050;cell cycle arrest;0.0425828950118687!GO:0006144;purine base metabolic process;0.0426806310206737!GO:0043550;regulation of lipid kinase activity;0.0427161595169355!GO:0016763;transferase activity, transferring pentosyl groups;0.042853864811935!GO:0008287;protein serine/threonine phosphatase complex;0.043232111656085!GO:0007021;tubulin folding;0.0433226273553106!GO:0006368;RNA elongation from RNA polymerase II promoter;0.043356831337143!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0436905248716587!GO:0005784;translocon complex;0.0439505727630815!GO:0046483;heterocycle metabolic process;0.0440554827386972!GO:0003682;chromatin binding;0.0441431012024664!GO:0051090;regulation of transcription factor activity;0.0444807876209844!GO:0031982;vesicle;0.0445382630468638!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0451058006965667!GO:0046128;purine ribonucleoside metabolic process;0.0453674586391746!GO:0042278;purine nucleoside metabolic process;0.0453674586391746!GO:0030125;clathrin vesicle coat;0.0466774228174294!GO:0030665;clathrin coated vesicle membrane;0.0466774228174294!GO:0015036;disulfide oxidoreductase activity;0.047245356427723!GO:0030119;AP-type membrane coat adaptor complex;0.047349679435402!GO:0030833;regulation of actin filament polymerization;0.0479236030429812!GO:0032508;DNA duplex unwinding;0.0488261370941814!GO:0032392;DNA geometric change;0.0488261370941814!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0488261370941814!GO:0048518;positive regulation of biological process;0.0492207028614367!GO:0009124;nucleoside monophosphate biosynthetic process;0.049239209926309!GO:0009123;nucleoside monophosphate metabolic process;0.049239209926309!GO:0017134;fibroblast growth factor binding;0.0493559995442088!GO:0032039;integrator complex;0.0494230008968936!GO:0006904;vesicle docking during exocytosis;0.0494230008968936!GO:0046519;sphingoid metabolic process;0.0498242374790694
 |sample_id=12209
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=blood
 |top_motifs=POU2F1..3:3.3047692326;POU5F1:3.20945799116;FOXA2:2.66248542242;PBX1:1.95460541429;ELF1,2,4:1.86846326877;DMAP1_NCOR{1,2}_SMARC:1.83460461801;TLX2:1.83306623834;FOX{I1,J2}:1.82753581051;FOX{F1,F2,J1}:1.75330376369;SPI1:1.4607040224;ELK1,4_GABP{A,B1}:1.42313366566;FOXO1,3,4:1.4168428197;IRF1,2:1.41091583274;CRX:1.35116641264;FOX{D1,D2}:1.32305728542;ETS1,2:1.30052798164;SPIB:1.29390721728;STAT1,3:1.13870156241;PAX6:1.11399152196;ESR1:1.08466028894;RUNX1..3:1.04896217417;YY1:1.01708216667;NFKB1_REL_RELA:0.977917261401;FOXP3:0.915684393104;NANOG{mouse}:0.906634765081;IRF7:0.886025014561;RFX2..5_RFXANK_RFXAP:0.842919032646;MYOD1:0.837141303932;AIRE:0.795069825832;LMO2:0.769674150543;CDX1,2,4:0.749259833548;ZEB1:0.726023125043;BPTF:0.711716721104;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.709238913943;OCT4_SOX2{dimer}:0.672686894807;ALX1:0.670762005469;NKX2-2,8:0.63180972621;RORA:0.608326886727;TGIF1:0.594724957127;HBP1_HMGB_SSRP1_UBTF:0.506998916983;SNAI1..3:0.504103847998;GATA6:0.479868634679;BREu{core}:0.475535819977;ATF5_CREB3:0.432291930102;NR5A1,2:0.402220364575;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.401031365207;VSX1,2:0.394942027553;CREB1:0.393278291266;CUX2:0.357942316902;FOXN1:0.353575193319;MYB:0.340216179714;HMX1:0.338299071482;HES1:0.336902769094;PDX1:0.325507208082;SOX{8,9,10}:0.320609503908;MEF2{A,B,C,D}:0.289027611508;NKX6-1,2:0.287410923467;FOXQ1:0.283226741518;SOX5:0.282762582516;PAX3,7:0.280240279867;NRF1:0.273421359381;ZNF148:0.25548565953;NFIX:0.254686303993;STAT5{A,B}:0.22143373441;ZNF143:0.213175097333;FOXP1:0.204707503938;LEF1_TCF7_TCF7L1,2:0.187062290771;NFIL3:0.184970930522;ATF2:0.149959974205;HOX{A6,A7,B6,B7}:0.129937426688;GLI1..3:0.123419600625;NHLH1,2:0.088407421397;PRRX1,2:0.0868442828553;SREBF1,2:0.0777612274537;ATF4:0.0306147050043;SPZ1:0.0214100186715;IKZF2:-0.00762941925825;EP300:-0.015567351764;PAX2:-0.0787557274514;HIF1A:-0.0871938686168;RBPJ:-0.119533841807;NKX2-1,4:-0.121647265838;NFY{A,B,C}:-0.129143788185;NFATC1..3:-0.130228375023;HAND1,2:-0.138344533709;ZFP161:-0.142314150831;HNF4A_NR2F1,2:-0.175750152657;TEF:-0.179378893102;ADNP_IRX_SIX_ZHX:-0.215228965093;TAL1_TCF{3,4,12}:-0.216888179468;SMAD1..7,9:-0.284943526357;CDC5L:-0.304505408407;PPARG:-0.318249501729;E2F1..5:-0.322348706703;TFAP4:-0.323969535214;EBF1:-0.332150233406;T:-0.356806471066;HNF1A:-0.357110160143;NKX2-3_NKX2-5:-0.401430598601;ALX4:-0.404052521487;POU1F1:-0.404588852971;ARID5B:-0.421762792897;AR:-0.425986796437;RXRA_VDR{dimer}:-0.438267923074;FOXL1:-0.453404815227;ZBTB16:-0.454030711537;TOPORS:-0.45545929304;PRDM1:-0.456882882406;EVI1:-0.475903343982;AHR_ARNT_ARNT2:-0.479419574159;NR6A1:-0.488202324127;CEBPA,B_DDIT3:-0.513173840988;bHLH_family:-0.51603603836;GFI1:-0.519639050355;ATF6:-0.521519931576;RFX1:-0.526568370109;FOSL2:-0.541269302248;TFCP2:-0.579645115137;FOS_FOS{B,L1}_JUN{B,D}:-0.587277985049;MYBL2:-0.625203323248;NR1H4:-0.650338930331;NANOG:-0.653508487838;PAX4:-0.656211727002;JUN:-0.665737219363;HOXA9_MEIS1:-0.672510274542;DBP:-0.691394863782;BACH2:-0.713207635608;MYFfamily:-0.719078292808;MAFB:-0.722893661287;XCPE1{core}:-0.735832145274;SRF:-0.757084526224;HOX{A4,D4}:-0.767774950486;POU6F1:-0.788102100946;ONECUT1,2:-0.810275153989;XBP1:-0.816936376946;PATZ1:-0.819683294382;ZNF238:-0.849775139311;TBP:-0.868357104934;NKX3-2:-0.900209519706;RXR{A,B,G}:-0.912311717739;RREB1:-0.913457220779;HLF:-0.916481162879;EGR1..3:-0.919963449954;SOX2:-0.929436171253;STAT2,4,6:-0.93204884399;MTE{core}:-0.96734368039;NFE2:-0.973796030766;HMGA1,2:-0.984052998904;MED-1{core}:-1.00310838083;EN1,2:-1.03021457207;MZF1:-1.04481440326;NKX3-1:-1.0537404555;HSF1,2:-1.06463613258;REST:-1.08397356865;TBX4,5:-1.08532030433;ZNF384:-1.09830674286;MTF1:-1.10063740556;TP53:-1.11620905188;NFE2L2:-1.12570341717;GATA4:-1.1271133331;SOX17:-1.12881603946;ZNF423:-1.19780383211;GFI1B:-1.23512437151;NR3C1:-1.23538441849;MAZ:-1.23794620687;HOX{A5,B5}:-1.27642795866;LHX3,4:-1.28591124982;SP1:-1.33549745272;PAX8:-1.36423334387;PITX1..3:-1.38942123818;UFEwm:-1.41082526924;GZF1:-1.43649783444;FOXM1:-1.43695241451;HIC1:-1.44883920118;ESRRA:-1.45961531167;GCM1,2:-1.49317411091;ZBTB6:-1.50123956752;TFAP2B:-1.54793234564;TFAP2{A,C}:-1.55949962296;GTF2I:-1.585877024;KLF4:-1.63557727434;NFE2L1:-1.69067837471;TEAD1:-1.69311297908;PAX5:-1.70578927416;POU3F1..4:-1.79877851376;PAX1,9:-1.80115953681;TLX1..3_NFIC{dimer}:-1.86982211917;FOXD3:-1.94585529661;GTF2A1,2:-1.98910431136;IKZF1:-1.99918024185;TFDP1:-2.01600391565;ZIC1..3:-2.17938274468
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12209-129D4;search_select_hide=table117:FF:12209-129D4
 }}

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FF:12209-129D4: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:34, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0