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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005703
|accession_numbers=CAGE;DRX008175;DRR009047;DRZ000472;DRZ001857;DRZ011822;DRZ013207!CAGE;DRX022801;DRR025140;DRZ003565;DRZ004448;DRZ008306;DRZ009189
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|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000012,CL:0000034,CL:0000144
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000034
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000021,FF:0000026,FF:0000001
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|
|expression_enrichment_score
|fonse_cell_line=
|fonse_cell_line=
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|fonse_cell_line_closure=
Line 35: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD34%252b%2520stem%2520cells%2520-%2520adult%2520bone%2520marrow%2520derived%252c%2520donor1%252c%2520tech_rep1.CNhs12588.12225-129F2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD34%252b%2520stem%2520cells%2520-%2520adult%2520bone%2520marrow%2520derived%252c%2520donor1%252c%2520tech_rep1.CNhs12588.12225-129F2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD34%252b%2520stem%2520cells%2520-%2520adult%2520bone%2520marrow%2520derived%252c%2520donor1%252c%2520tech_rep2.CNhs12553.12225-129F2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD34%252b%2520stem%2520cells%2520-%2520adult%2520bone%2520marrow%2520derived%252c%2520donor1%252c%2520tech_rep2.CNhs12553.12225-129F2.hg38.nobarcode.ctss.bed.gz
|id=FF:12225-129F2
|id=FF:12225-129F2
|is_a=EFO:0002091;;FF:0000002;;FF:0000026;;FF:0000210
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|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12225
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12225
|name=CD34+ stem cells - adult bone marrow derived, donor1
|name=CD34+ stem cells - adult bone marrow derived, donor1
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 60:
|profile_cagescan=,,,
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|profile_hcage=CNhs12588 & CNhs12553,LSID912,release012,COMPLETED
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|rna_box=129
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|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=3.26862
|rna_weight_ug=3.26862
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|sample_cell_line=
Line 69: Line 91:
|sample_ethnicity=
|sample_ethnicity=
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.76704732177435e-272!GO:0043227;membrane-bound organelle;4.74870694468756e-239!GO:0043231;intracellular membrane-bound organelle;1.22914948770476e-238!GO:0043226;organelle;6.83313674881821e-222!GO:0043229;intracellular organelle;3.66221895550095e-221!GO:0005737;cytoplasm;1.34745709200525e-169!GO:0044422;organelle part;5.89817906121374e-154!GO:0044446;intracellular organelle part;5.06050959790853e-152!GO:0044444;cytoplasmic part;2.37277954918614e-127!GO:0044237;cellular metabolic process;4.45784562730583e-119!GO:0032991;macromolecular complex;5.23216959548627e-119!GO:0005634;nucleus;1.08520830051094e-115!GO:0044238;primary metabolic process;6.48328785364533e-114!GO:0043170;macromolecule metabolic process;8.35119892646062e-108!GO:0030529;ribonucleoprotein complex;2.97935675423443e-101!GO:0044428;nuclear part;5.99713920677275e-93!GO:0003723;RNA binding;5.62473570087801e-88!GO:0043233;organelle lumen;4.04983313323919e-87!GO:0031974;membrane-enclosed lumen;4.04983313323919e-87!GO:0005739;mitochondrion;7.96825816276055e-81!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.10725833389282e-68!GO:0043283;biopolymer metabolic process;1.07200651078496e-67!GO:0010467;gene expression;2.10053123476275e-61!GO:0006396;RNA processing;1.21690480857339e-60!GO:0006412;translation;2.42527488598362e-60!GO:0043234;protein complex;8.47225713408672e-60!GO:0005840;ribosome;2.18675374900017e-58!GO:0044429;mitochondrial part;4.16817509447699e-54!GO:0005515;protein binding;4.78639934548825e-54!GO:0006259;DNA metabolic process;6.1477705167565e-54!GO:0031981;nuclear lumen;8.25681824053091e-54!GO:0003735;structural constituent of ribosome;1.5342716127017e-50!GO:0016071;mRNA metabolic process;4.94631544321083e-49!GO:0019538;protein metabolic process;6.630088335576e-49!GO:0009059;macromolecule biosynthetic process;1.68338017463719e-48!GO:0031967;organelle envelope;7.56220533399273e-48!GO:0031975;envelope;2.12495763685453e-47!GO:0009058;biosynthetic process;7.5475659832942e-46!GO:0044249;cellular biosynthetic process;1.73549067582019e-45!GO:0044267;cellular protein metabolic process;7.47919561665696e-45!GO:0044260;cellular macromolecule metabolic process;2.32351177708268e-44!GO:0031090;organelle membrane;4.11664136812011e-44!GO:0003676;nucleic acid binding;6.65493591531843e-44!GO:0033279;ribosomal subunit;6.86339570176078e-44!GO:0008380;RNA splicing;1.86209771108755e-43!GO:0006397;mRNA processing;7.8173685558586e-42!GO:0033036;macromolecule localization;1.05255278621284e-41!GO:0015031;protein transport;1.04531044777346e-40!GO:0016043;cellular component organization and biogenesis;2.8980423951681e-39!GO:0005829;cytosol;3.49813421557786e-39!GO:0065003;macromolecular complex assembly;3.61133085476571e-39!GO:0045184;establishment of protein localization;1.82453975822326e-38!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.28876053161437e-38!GO:0008104;protein localization;1.39640080379125e-37!GO:0006996;organelle organization and biogenesis;2.52131679546095e-37!GO:0022607;cellular component assembly;8.58125921889897e-34!GO:0019866;organelle inner membrane;2.47904711146147e-33!GO:0005740;mitochondrial envelope;4.31332744991007e-33!GO:0005681;spliceosome;4.62595782200558e-33!GO:0005654;nucleoplasm;1.38519453257836e-32!GO:0043228;non-membrane-bound organelle;1.50281442111383e-32!GO:0043232;intracellular non-membrane-bound organelle;1.50281442111383e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.24651891154927e-32!GO:0046907;intracellular transport;2.11582542574551e-31!GO:0031966;mitochondrial membrane;5.8097785016958e-31!GO:0016070;RNA metabolic process;1.0602848659711e-30!GO:0005743;mitochondrial inner membrane;2.92323793458259e-30!GO:0044445;cytosolic part;7.05495610756745e-30!GO:0005694;chromosome;1.29551147511366e-29!GO:0006974;response to DNA damage stimulus;2.4124328905617e-29!GO:0007049;cell cycle;2.5048650806507e-28!GO:0006886;intracellular protein transport;2.99457812987803e-28!GO:0044427;chromosomal part;7.99274566437599e-27!GO:0006281;DNA repair;3.9328835828963e-26!GO:0031980;mitochondrial lumen;1.01554575806166e-25!GO:0005759;mitochondrial matrix;1.01554575806166e-25!GO:0051276;chromosome organization and biogenesis;3.51124445066777e-25!GO:0000166;nucleotide binding;4.74463034905216e-25!GO:0044451;nucleoplasm part;1.26026446676699e-24!GO:0051649;establishment of cellular localization;4.8423860003963e-24!GO:0051641;cellular localization;1.79269077032086e-23!GO:0006119;oxidative phosphorylation;2.71698700329303e-23!GO:0015934;large ribosomal subunit;1.00185467249635e-22!GO:0044455;mitochondrial membrane part;1.59968985852374e-22!GO:0005730;nucleolus;1.96984602262543e-22!GO:0015935;small ribosomal subunit;2.88014557970698e-22!GO:0022618;protein-RNA complex assembly;9.5056924860356e-22!GO:0022402;cell cycle process;9.80124134990358e-22!GO:0006260;DNA replication;1.00680161574814e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.35121730962123e-20!GO:0016462;pyrophosphatase activity;1.46583809001359e-20!GO:0006325;establishment and/or maintenance of chromatin architecture;1.76697758343451e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.80062098715541e-20!GO:0000278;mitotic cell cycle;6.15084069639869e-20!GO:0016874;ligase activity;9.60969651099505e-20!GO:0006323;DNA packaging;9.83325022766014e-20!GO:0044265;cellular macromolecule catabolic process;1.02697985488669e-19!GO:0017111;nucleoside-triphosphatase activity;2.39507393258266e-19!GO:0009719;response to endogenous stimulus;2.73798295683437e-19!GO:0006457;protein folding;7.37150960920202e-19!GO:0005746;mitochondrial respiratory chain;3.85099645376196e-18!GO:0044248;cellular catabolic process;6.41236675883922e-18!GO:0000502;proteasome complex (sensu Eukaryota);1.12351621446708e-17!GO:0022403;cell cycle phase;2.42108754829905e-17!GO:0042254;ribosome biogenesis and assembly;2.57544107603238e-17!GO:0019941;modification-dependent protein catabolic process;5.32696113067723e-17!GO:0043632;modification-dependent macromolecule catabolic process;5.32696113067723e-17!GO:0005761;mitochondrial ribosome;5.46014822782073e-17!GO:0000313;organellar ribosome;5.46014822782073e-17!GO:0006511;ubiquitin-dependent protein catabolic process;5.48774092024885e-17!GO:0043285;biopolymer catabolic process;5.53290067512274e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;5.63326536245335e-17!GO:0006512;ubiquitin cycle;1.19333751794248e-16!GO:0032553;ribonucleotide binding;1.67333768264836e-16!GO:0032555;purine ribonucleotide binding;1.67333768264836e-16!GO:0008135;translation factor activity, nucleic acid binding;1.73651784121671e-16!GO:0044257;cellular protein catabolic process;2.00155719591939e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.30639735047331e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.47911789932559e-16!GO:0003954;NADH dehydrogenase activity;2.47911789932559e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.47911789932559e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;2.57675401513353e-16!GO:0000375;RNA splicing, via transesterification reactions;2.57675401513353e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.57675401513353e-16!GO:0017076;purine nucleotide binding;5.54149664488365e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.58534585190614e-16!GO:0016604;nuclear body;6.73743326129189e-16!GO:0048770;pigment granule;7.02660320806837e-16!GO:0042470;melanosome;7.02660320806837e-16!GO:0008134;transcription factor binding;7.13239983898531e-16!GO:0009057;macromolecule catabolic process;8.85419473248396e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.65713628206362e-16!GO:0000785;chromatin;1.01319841408378e-15!GO:0006605;protein targeting;1.69492726120733e-15!GO:0000087;M phase of mitotic cell cycle;2.01542777457355e-15!GO:0051186;cofactor metabolic process;2.29753812045362e-15!GO:0042623;ATPase activity, coupled;2.34930868241722e-15!GO:0016887;ATPase activity;2.38652987027011e-15!GO:0065004;protein-DNA complex assembly;2.66362314184331e-15!GO:0031965;nuclear membrane;3.45268798320893e-15!GO:0005524;ATP binding;3.48510911384753e-15!GO:0012505;endomembrane system;4.0078900147136e-15!GO:0005635;nuclear envelope;5.1969439128955e-15!GO:0006333;chromatin assembly or disassembly;5.24360320270617e-15!GO:0007067;mitosis;5.47456555175317e-15!GO:0032559;adenyl ribonucleotide binding;6.25495082224099e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.0725196551306e-14!GO:0042773;ATP synthesis coupled electron transport;1.0725196551306e-14!GO:0051301;cell division;1.26634864964396e-14!GO:0044453;nuclear membrane part;1.34963226010973e-14!GO:0030964;NADH dehydrogenase complex (quinone);2.27737990731499e-14!GO:0045271;respiratory chain complex I;2.27737990731499e-14!GO:0005747;mitochondrial respiratory chain complex I;2.27737990731499e-14!GO:0000279;M phase;3.05889528331739e-14!GO:0030554;adenyl nucleotide binding;3.12647459057714e-14!GO:0006413;translational initiation;3.84963351984376e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.27826483548725e-14!GO:0043412;biopolymer modification;1.24188496493043e-13!GO:0003743;translation initiation factor activity;1.71524983489076e-13!GO:0006915;apoptosis;4.13208338292625e-13!GO:0012501;programmed cell death;4.41119208695576e-13!GO:0006334;nucleosome assembly;5.17798960565555e-13!GO:0030163;protein catabolic process;5.90630813064768e-13!GO:0050657;nucleic acid transport;6.65206390624821e-13!GO:0051236;establishment of RNA localization;6.65206390624821e-13!GO:0050658;RNA transport;6.65206390624821e-13!GO:0006446;regulation of translational initiation;6.82388562900666e-13!GO:0006403;RNA localization;7.42847524782743e-13!GO:0005643;nuclear pore;1.68188864492776e-12!GO:0004386;helicase activity;2.76903923432052e-12!GO:0051082;unfolded protein binding;3.0178781631838e-12!GO:0016607;nuclear speck;3.19705199919155e-12!GO:0031497;chromatin assembly;4.02660915340608e-12!GO:0006364;rRNA processing;4.10619299943136e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.58259094160411e-12!GO:0016072;rRNA metabolic process;8.99597093019998e-12!GO:0008219;cell death;1.12770370989684e-11!GO:0016265;death;1.12770370989684e-11!GO:0006732;coenzyme metabolic process;1.26664702467769e-11!GO:0006399;tRNA metabolic process;1.29968430143113e-11!GO:0005783;endoplasmic reticulum;1.36976667471163e-11!GO:0016568;chromatin modification;1.50897149302406e-11!GO:0065002;intracellular protein transport across a membrane;1.57589618979828e-11!GO:0006913;nucleocytoplasmic transport;1.80167017997844e-11!GO:0009259;ribonucleotide metabolic process;2.49193860191039e-11!GO:0006163;purine nucleotide metabolic process;3.51035647041863e-11!GO:0006464;protein modification process;3.95882004104565e-11!GO:0051169;nuclear transport;4.18382101047875e-11!GO:0006164;purine nucleotide biosynthetic process;6.01049241934849e-11!GO:0051028;mRNA transport;6.23145167789143e-11!GO:0008026;ATP-dependent helicase activity;7.00754598392236e-11!GO:0044432;endoplasmic reticulum part;9.1828022447053e-11!GO:0009260;ribonucleotide biosynthetic process;1.01629118614484e-10!GO:0051726;regulation of cell cycle;1.05752935827932e-10!GO:0043566;structure-specific DNA binding;1.14491010921694e-10!GO:0016779;nucleotidyltransferase activity;1.26160730959345e-10!GO:0000074;regulation of progression through cell cycle;1.42904570119495e-10!GO:0009056;catabolic process;1.87588278494912e-10!GO:0006261;DNA-dependent DNA replication;2.44731562006573e-10!GO:0003712;transcription cofactor activity;3.63313240521931e-10!GO:0009150;purine ribonucleotide metabolic process;4.63311629000627e-10!GO:0048193;Golgi vesicle transport;4.63311629000627e-10!GO:0003697;single-stranded DNA binding;4.86067091289672e-10!GO:0046930;pore complex;4.88553059088749e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.27173596846068e-10!GO:0016192;vesicle-mediated transport;7.33198729553783e-10!GO:0030532;small nuclear ribonucleoprotein complex;7.42076497563644e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.42076497563644e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.46473028338643e-10!GO:0009152;purine ribonucleotide biosynthetic process;7.99090978401672e-10!GO:0008565;protein transporter activity;9.01651822635217e-10!GO:0050794;regulation of cellular process;9.18825802346963e-10!GO:0016787;hydrolase activity;1.62392994326616e-09!GO:0009060;aerobic respiration;1.96404035854725e-09!GO:0017038;protein import;2.17161901616288e-09!GO:0019829;cation-transporting ATPase activity;3.03676327454996e-09!GO:0051188;cofactor biosynthetic process;4.13313582199328e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.76302748939168e-09!GO:0019222;regulation of metabolic process;4.80536049280232e-09!GO:0005794;Golgi apparatus;5.96316622196276e-09!GO:0006461;protein complex assembly;1.21086371586284e-08!GO:0009055;electron carrier activity;1.31927322606441e-08!GO:0008639;small protein conjugating enzyme activity;1.42295293773974e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.43527908469193e-08!GO:0043687;post-translational protein modification;1.48695694030867e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.69100243833242e-08!GO:0051246;regulation of protein metabolic process;2.04633459473215e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.50529072243293e-08!GO:0045333;cellular respiration;2.63528931878339e-08!GO:0004842;ubiquitin-protein ligase activity;2.88392232488988e-08!GO:0009117;nucleotide metabolic process;3.00452311099527e-08!GO:0006950;response to stress;3.39324808273023e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.64927882500461e-08!GO:0004812;aminoacyl-tRNA ligase activity;3.64927882500461e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.64927882500461e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.76116022576389e-08!GO:0006366;transcription from RNA polymerase II promoter;3.90155853869298e-08!GO:0005793;ER-Golgi intermediate compartment;4.23859095937799e-08!GO:0015986;ATP synthesis coupled proton transport;4.51348577851631e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.51348577851631e-08!GO:0000786;nucleosome;4.73832080331227e-08!GO:0042981;regulation of apoptosis;4.89925332410271e-08!GO:0000775;chromosome, pericentric region;6.65324960559809e-08!GO:0005789;endoplasmic reticulum membrane;7.45996469592059e-08!GO:0043067;regulation of programmed cell death;8.41733440567969e-08!GO:0019787;small conjugating protein ligase activity;9.19565232310572e-08!GO:0043038;amino acid activation;9.23755017268061e-08!GO:0006418;tRNA aminoacylation for protein translation;9.23755017268061e-08!GO:0043039;tRNA aminoacylation;9.23755017268061e-08!GO:0004298;threonine endopeptidase activity;9.60557810995756e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.11438801936461e-07!GO:0006310;DNA recombination;1.13091357984655e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.17002604019855e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.17002604019855e-07!GO:0009141;nucleoside triphosphate metabolic process;1.24266366762338e-07!GO:0007005;mitochondrion organization and biogenesis;1.40597878159334e-07!GO:0005657;replication fork;1.68101370435925e-07!GO:0006099;tricarboxylic acid cycle;2.14996402429257e-07!GO:0046356;acetyl-CoA catabolic process;2.14996402429257e-07!GO:0003713;transcription coactivator activity;2.25850500976148e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.25850500976148e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.25850500976148e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.47040457903046e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.47040457903046e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.50551169504179e-07!GO:0016740;transferase activity;2.51444629725809e-07!GO:0008094;DNA-dependent ATPase activity;3.24992211545256e-07!GO:0005768;endosome;3.64526096524965e-07!GO:0031323;regulation of cellular metabolic process;3.73541079755736e-07!GO:0016881;acid-amino acid ligase activity;3.88919416021662e-07!GO:0000245;spliceosome assembly;4.07357178223558e-07!GO:0006084;acetyl-CoA metabolic process;4.99490221624554e-07!GO:0045259;proton-transporting ATP synthase complex;5.46805690251863e-07!GO:0051325;interphase;5.82928266738e-07!GO:0005819;spindle;6.83088946129068e-07!GO:0005813;centrosome;6.89658512100926e-07!GO:0004518;nuclease activity;7.49166773687741e-07!GO:0006401;RNA catabolic process;7.49166773687741e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.6797752308378e-07!GO:0003899;DNA-directed RNA polymerase activity;7.71048455595856e-07!GO:0051329;interphase of mitotic cell cycle;7.8006810379711e-07!GO:0009108;coenzyme biosynthetic process;8.29198197863042e-07!GO:0006754;ATP biosynthetic process;8.69972620684911e-07!GO:0006753;nucleoside phosphate metabolic process;8.69972620684911e-07!GO:0046034;ATP metabolic process;1.04007969598772e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.21857984524598e-06!GO:0050789;regulation of biological process;1.30867208031824e-06!GO:0032446;protein modification by small protein conjugation;1.31366731601423e-06!GO:0005773;vacuole;1.42388999882954e-06!GO:0003690;double-stranded DNA binding;1.431452718421e-06!GO:0000323;lytic vacuole;1.52910760047051e-06!GO:0005764;lysosome;1.52910760047051e-06!GO:0005815;microtubule organizing center;1.53081076589946e-06!GO:0016567;protein ubiquitination;2.60223580627894e-06!GO:0000075;cell cycle checkpoint;2.64986576645293e-06!GO:0051170;nuclear import;2.8366406253958e-06!GO:0051187;cofactor catabolic process;3.0820247685308e-06!GO:0016363;nuclear matrix;3.12238785266611e-06!GO:0009109;coenzyme catabolic process;3.31824847431692e-06!GO:0005762;mitochondrial large ribosomal subunit;3.50193853867159e-06!GO:0000315;organellar large ribosomal subunit;3.50193853867159e-06!GO:0006302;double-strand break repair;4.53679953190595e-06!GO:0006613;cotranslational protein targeting to membrane;5.01170577056699e-06!GO:0006793;phosphorus metabolic process;5.25279567267898e-06!GO:0006796;phosphate metabolic process;5.25279567267898e-06!GO:0015630;microtubule cytoskeleton;5.46857815452761e-06!GO:0006888;ER to Golgi vesicle-mediated transport;6.51263204656912e-06!GO:0006606;protein import into nucleus;6.51263204656912e-06!GO:0006350;transcription;6.58279357777739e-06!GO:0003724;RNA helicase activity;6.70474236974408e-06!GO:0043069;negative regulation of programmed cell death;8.74020286664803e-06!GO:0043066;negative regulation of apoptosis;1.07903046226682e-05!GO:0008654;phospholipid biosynthetic process;1.10847083989462e-05!GO:0010468;regulation of gene expression;1.11791910962356e-05!GO:0006916;anti-apoptosis;1.15698468200623e-05!GO:0005770;late endosome;1.16938979405554e-05!GO:0048523;negative regulation of cellular process;1.19049335609754e-05!GO:0016741;transferase activity, transferring one-carbon groups;1.38215383087488e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.3936523772292e-05!GO:0016563;transcription activator activity;1.46465357855705e-05!GO:0043623;cellular protein complex assembly;1.56257040428002e-05!GO:0000314;organellar small ribosomal subunit;1.60548295871792e-05!GO:0005763;mitochondrial small ribosomal subunit;1.60548295871792e-05!GO:0008168;methyltransferase activity;1.87336052765176e-05!GO:0006752;group transfer coenzyme metabolic process;1.93702906139565e-05!GO:0016310;phosphorylation;2.06078840703007e-05!GO:0051427;hormone receptor binding;2.37087895533739e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.37473011362392e-05!GO:0003678;DNA helicase activity;2.38203861275819e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.56234226034269e-05!GO:0000151;ubiquitin ligase complex;3.18687768995892e-05!GO:0043021;ribonucleoprotein binding;3.36542606538398e-05!GO:0009165;nucleotide biosynthetic process;3.52434995535359e-05!GO:0007051;spindle organization and biogenesis;3.62340521277045e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.66515140011756e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.675859449567e-05!GO:0003684;damaged DNA binding;3.89637994339982e-05!GO:0003729;mRNA binding;3.97556304283224e-05!GO:0051168;nuclear export;4.02701627778191e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;4.20555764729793e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;4.27571646989098e-05!GO:0006417;regulation of translation;4.63763407774121e-05!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;4.91350833670125e-05!GO:0035257;nuclear hormone receptor binding;4.92309318837378e-05!GO:0016853;isomerase activity;5.46827192256129e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.57839684124972e-05!GO:0031324;negative regulation of cellular metabolic process;5.85186359515351e-05!GO:0008033;tRNA processing;6.68740025811148e-05!GO:0048475;coated membrane;6.68740025811148e-05!GO:0030117;membrane coat;6.68740025811148e-05!GO:0007059;chromosome segregation;6.70353807329328e-05!GO:0003677;DNA binding;6.75012997651046e-05!GO:0000776;kinetochore;7.05836396850073e-05!GO:0005667;transcription factor complex;7.3141880302668e-05!GO:0006612;protein targeting to membrane;7.39697029795682e-05!GO:0043681;protein import into mitochondrion;7.65955603063169e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.67438964767949e-05!GO:0044452;nucleolar part;8.1274627705445e-05!GO:0016491;oxidoreductase activity;8.42520196587799e-05!GO:0004527;exonuclease activity;8.69706855715252e-05!GO:0051052;regulation of DNA metabolic process;9.05629653915767e-05!GO:0003682;chromatin binding;9.25089174901089e-05!GO:0006402;mRNA catabolic process;9.25089174901089e-05!GO:0030120;vesicle coat;9.73874689955534e-05!GO:0030662;coated vesicle membrane;9.73874689955534e-05!GO:0065009;regulation of a molecular function;0.000117404860217607!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000119645001828069!GO:0015399;primary active transmembrane transporter activity;0.000119645001828069!GO:0006626;protein targeting to mitochondrion;0.000133340119579214!GO:0007243;protein kinase cascade;0.000143755104592298!GO:0044440;endosomal part;0.000158687497289737!GO:0010008;endosome membrane;0.000158687497289737!GO:0048519;negative regulation of biological process;0.000194904904414659!GO:0046483;heterocycle metabolic process;0.000195061041184308!GO:0008186;RNA-dependent ATPase activity;0.000201233618846659!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000202893687985655!GO:0046474;glycerophospholipid biosynthetic process;0.000234981818805218!GO:0045454;cell redox homeostasis;0.00025239381204571!GO:0019899;enzyme binding;0.000259998175182416!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000262007086044478!GO:0005885;Arp2/3 protein complex;0.000262211329327653!GO:0031072;heat shock protein binding;0.000268928515622448!GO:0032508;DNA duplex unwinding;0.000271472552824613!GO:0032392;DNA geometric change;0.000271472552824613!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000281755071709802!GO:0005788;endoplasmic reticulum lumen;0.000294717647683772!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000318846681860261!GO:0016859;cis-trans isomerase activity;0.000322538110079502!GO:0006383;transcription from RNA polymerase III promoter;0.000330619007199411!GO:0065007;biological regulation;0.000393804226332941!GO:0032774;RNA biosynthetic process;0.000398795540556189!GO:0031326;regulation of cellular biosynthetic process;0.000418346063225255!GO:0016564;transcription repressor activity;0.000427285599944754!GO:0006839;mitochondrial transport;0.000470025596456116!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000476725241916805!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000491484884661653!GO:0000228;nuclear chromosome;0.000507317873604871!GO:0009892;negative regulation of metabolic process;0.000527950003904897!GO:0006351;transcription, DNA-dependent;0.000531248021451232!GO:0016481;negative regulation of transcription;0.000543897613440884!GO:0006414;translational elongation;0.000548548868050394!GO:0005525;GTP binding;0.000601473191289288!GO:0006082;organic acid metabolic process;0.000601473191289288!GO:0004004;ATP-dependent RNA helicase activity;0.000608714895567593!GO:0046489;phosphoinositide biosynthetic process;0.000641836079613767!GO:0019752;carboxylic acid metabolic process;0.000676017653042283!GO:0005637;nuclear inner membrane;0.000687075275091084!GO:0006268;DNA unwinding during replication;0.000692283764412101!GO:0007006;mitochondrial membrane organization and biogenesis;0.000731056801715957!GO:0005684;U2-dependent spliceosome;0.00077611775568114!GO:0030880;RNA polymerase complex;0.000809335369374519!GO:0051252;regulation of RNA metabolic process;0.000809335369374519!GO:0006650;glycerophospholipid metabolic process;0.000850021920016288!GO:0006091;generation of precursor metabolites and energy;0.000858221951448073!GO:0030384;phosphoinositide metabolic process;0.00085956594989989!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00085956594989989!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00085956594989989!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00085956594989989!GO:0003924;GTPase activity;0.000861088839471147!GO:0006352;transcription initiation;0.000877268045680614!GO:0051920;peroxiredoxin activity;0.000994701068638571!GO:0007088;regulation of mitosis;0.00108000490147743!GO:0045786;negative regulation of progression through cell cycle;0.00110745267770207!GO:0006284;base-excision repair;0.00111341385961226!GO:0006405;RNA export from nucleus;0.00112454868994768!GO:0043488;regulation of mRNA stability;0.00112565276134425!GO:0043487;regulation of RNA stability;0.00112565276134425!GO:0004540;ribonuclease activity;0.00125740758802787!GO:0009112;nucleobase metabolic process;0.00125907167766499!GO:0051087;chaperone binding;0.00126072742986657!GO:0022890;inorganic cation transmembrane transporter activity;0.00126167102025916!GO:0031988;membrane-bound vesicle;0.00127098257957782!GO:0015980;energy derivation by oxidation of organic compounds;0.00137207476406843!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00138922229802727!GO:0048500;signal recognition particle;0.00138957109581703!GO:0043414;biopolymer methylation;0.00142228119849846!GO:0009124;nucleoside monophosphate biosynthetic process;0.00142264700542211!GO:0009123;nucleoside monophosphate metabolic process;0.00142264700542211!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00145433321599986!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00147998763980772!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00147998763980772!GO:0015992;proton transport;0.00148473485644751!GO:0006818;hydrogen transport;0.00158400649418359!GO:0008408;3'-5' exonuclease activity;0.0015877233016504!GO:0008312;7S RNA binding;0.0016299946928218!GO:0008632;apoptotic program;0.0016779153778835!GO:0031968;organelle outer membrane;0.00167881122853449!GO:0045449;regulation of transcription;0.0017067824103902!GO:0046467;membrane lipid biosynthetic process;0.00171782232258588!GO:0043596;nuclear replication fork;0.00172642092174937!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00178808006429599!GO:0000428;DNA-directed RNA polymerase complex;0.00178808006429599!GO:0043492;ATPase activity, coupled to movement of substances;0.00180997365979345!GO:0007052;mitotic spindle organization and biogenesis;0.00183340960406908!GO:0019843;rRNA binding;0.00189088634363368!GO:0006338;chromatin remodeling;0.0019978265191515!GO:0007093;mitotic cell cycle checkpoint;0.00200548446390949!GO:0047485;protein N-terminus binding;0.00204976197097696!GO:0031982;vesicle;0.00205055688076628!GO:0006275;regulation of DNA replication;0.00207065525604255!GO:0005741;mitochondrial outer membrane;0.00211079421132695!GO:0005798;Golgi-associated vesicle;0.00213216336913508!GO:0019867;outer membrane;0.00213618016002874!GO:0050790;regulation of catalytic activity;0.00213618016002874!GO:0009889;regulation of biosynthetic process;0.00216273317106034!GO:0044431;Golgi apparatus part;0.00230571116716529!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00232491671589718!GO:0003887;DNA-directed DNA polymerase activity;0.00239119353310052!GO:0032259;methylation;0.00247859150562406!GO:0032561;guanyl ribonucleotide binding;0.00248546922584437!GO:0019001;guanyl nucleotide binding;0.00248546922584437!GO:0000059;protein import into nucleus, docking;0.00250582412496353!GO:0016023;cytoplasmic membrane-bound vesicle;0.00265449863603259!GO:0042802;identical protein binding;0.00265531584963503!GO:0016251;general RNA polymerase II transcription factor activity;0.00271759165622762!GO:0044454;nuclear chromosome part;0.00272336472031787!GO:0048471;perinuclear region of cytoplasm;0.00273772282243818!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00274265242344599!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00288918953317294!GO:0006270;DNA replication initiation;0.00299598086201429!GO:0031570;DNA integrity checkpoint;0.00310380112009097!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00316068290570373!GO:0045047;protein targeting to ER;0.00316068290570373!GO:0030521;androgen receptor signaling pathway;0.00320115146699147!GO:0004003;ATP-dependent DNA helicase activity;0.0033620877888826!GO:0003714;transcription corepressor activity;0.00336870519029623!GO:0005758;mitochondrial intermembrane space;0.00337822592905921!GO:0006144;purine base metabolic process;0.0033870370066101!GO:0006289;nucleotide-excision repair;0.0034372098516544!GO:0009161;ribonucleoside monophosphate metabolic process;0.00357243539192569!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00357243539192569!GO:0033116;ER-Golgi intermediate compartment membrane;0.00367449475674573!GO:0006506;GPI anchor biosynthetic process;0.00373580657440218!GO:0005769;early endosome;0.0037381890796329!GO:0000178;exosome (RNase complex);0.00377564014346787!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00379398370531615!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0038432436647869!GO:0051539;4 iron, 4 sulfur cluster binding;0.0038432436647869!GO:0004532;exoribonuclease activity;0.00393102793918869!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00393102793918869!GO:0035258;steroid hormone receptor binding;0.0039711727048057!GO:0000922;spindle pole;0.0039937720418513!GO:0009116;nucleoside metabolic process;0.00408369314352517!GO:0045045;secretory pathway;0.00415177338296843!GO:0015036;disulfide oxidoreductase activity;0.00418651136281862!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00428760334342361!GO:0006220;pyrimidine nucleotide metabolic process;0.00441351962315012!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0044845752510773!GO:0030867;rough endoplasmic reticulum membrane;0.00461432977820898!GO:0006611;protein export from nucleus;0.00471666705762758!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00471666705762758!GO:0032200;telomere organization and biogenesis;0.00476774183140036!GO:0000723;telomere maintenance;0.00476774183140036!GO:0006778;porphyrin metabolic process;0.00480255083399909!GO:0033013;tetrapyrrole metabolic process;0.00480255083399909!GO:0031410;cytoplasmic vesicle;0.00486286673942453!GO:0000049;tRNA binding;0.00489152545817577!GO:0031124;mRNA 3'-end processing;0.00512928077052628!GO:0042393;histone binding;0.00522765422091844!GO:0031902;late endosome membrane;0.00535085400491293!GO:0009451;RNA modification;0.00535085400491293!GO:0003711;transcription elongation regulator activity;0.00545895854229525!GO:0016197;endosome transport;0.00561903268566931!GO:0006497;protein amino acid lipidation;0.00561903268566931!GO:0016272;prefoldin complex;0.00568510909806323!GO:0006979;response to oxidative stress;0.00586148439715158!GO:0000287;magnesium ion binding;0.00589269130098356!GO:0000082;G1/S transition of mitotic cell cycle;0.00589626157845607!GO:0008234;cysteine-type peptidase activity;0.00607322087830396!GO:0016408;C-acyltransferase activity;0.0062460091953031!GO:0006505;GPI anchor metabolic process;0.00631672474227352!GO:0051540;metal cluster binding;0.00649531580761009!GO:0051536;iron-sulfur cluster binding;0.00649531580761009!GO:0030518;steroid hormone receptor signaling pathway;0.00663222010597575!GO:0006779;porphyrin biosynthetic process;0.00685415322151699!GO:0033014;tetrapyrrole biosynthetic process;0.00685415322151699!GO:0006520;amino acid metabolic process;0.00693930301163454!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00696744188597747!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00696800540116442!GO:0006595;polyamine metabolic process;0.00710189276083443!GO:0042158;lipoprotein biosynthetic process;0.00725378777958682!GO:0005048;signal sequence binding;0.00725753074785028!GO:0008180;signalosome;0.00770761950609006!GO:0031252;leading edge;0.00773047476188003!GO:0043065;positive regulation of apoptosis;0.00775695072396506!GO:0006730;one-carbon compound metabolic process;0.00782892453986821!GO:0051287;NAD binding;0.00796383882139503!GO:0043601;nuclear replisome;0.00808868511963511!GO:0030894;replisome;0.00808868511963511!GO:0000118;histone deacetylase complex;0.00821769589693875!GO:0007021;tubulin folding;0.00847413616545649!GO:0015631;tubulin binding;0.00854465509224852!GO:0032940;secretion by cell;0.00862119193229295!GO:0030663;COPI coated vesicle membrane;0.00879693312712643!GO:0030126;COPI vesicle coat;0.00879693312712643!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00899415171746893!GO:0043022;ribosome binding;0.0090346368563493!GO:0040029;regulation of gene expression, epigenetic;0.00949841051357094!GO:0046966;thyroid hormone receptor binding;0.00949841051357094!GO:0008276;protein methyltransferase activity;0.00973244185836044!GO:0000339;RNA cap binding;0.00979559764559146!GO:0004519;endonuclease activity;0.00983504038468462!GO:0003746;translation elongation factor activity;0.00994521902557294!GO:0048487;beta-tubulin binding;0.00994521902557294!GO:0000725;recombinational repair;0.010297755365743!GO:0000724;double-strand break repair via homologous recombination;0.010297755365743!GO:0006891;intra-Golgi vesicle-mediated transport;0.0103117788447408!GO:0043068;positive regulation of programmed cell death;0.0103202817357285!GO:0005832;chaperonin-containing T-complex;0.0103872571793308!GO:0051789;response to protein stimulus;0.0104480112855385!GO:0006986;response to unfolded protein;0.0104480112855385!GO:0003725;double-stranded RNA binding;0.0105533348963405!GO:0000077;DNA damage checkpoint;0.0113638474228116!GO:0004576;oligosaccharyl transferase activity;0.0115681631413648!GO:0005876;spindle microtubule;0.0116566242503685!GO:0042770;DNA damage response, signal transduction;0.0116592205038888!GO:0008610;lipid biosynthetic process;0.0116762073586411!GO:0042168;heme metabolic process;0.0116762073586411!GO:0006643;membrane lipid metabolic process;0.0118507646963984!GO:0031970;organelle envelope lumen;0.011861797550802!GO:0030218;erythrocyte differentiation;0.011910787386417!GO:0030176;integral to endoplasmic reticulum membrane;0.0119453787339775!GO:0007034;vacuolar transport;0.0119463291141948!GO:0051053;negative regulation of DNA metabolic process;0.0122612017300932!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0122709566991518!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0122709566991518!GO:0009126;purine nucleoside monophosphate metabolic process;0.0122709566991518!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0122709566991518!GO:0006740;NADPH regeneration;0.0125725106395282!GO:0006098;pentose-phosphate shunt;0.0125725106395282!GO:0000726;non-recombinational repair;0.012627306768937!GO:0006376;mRNA splice site selection;0.0128573090367655!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0128573090367655!GO:0005774;vacuolar membrane;0.0130532725285534!GO:0008139;nuclear localization sequence binding;0.0130717368530774!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0131417624010417!GO:0006672;ceramide metabolic process;0.0133635705221311!GO:0032984;macromolecular complex disassembly;0.0133659579120429!GO:0030433;ER-associated protein catabolic process;0.0134880522348808!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0134880522348808!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0135707987294051!GO:0015002;heme-copper terminal oxidase activity;0.0135707987294051!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0135707987294051!GO:0004129;cytochrome-c oxidase activity;0.0135707987294051!GO:0045947;negative regulation of translational initiation;0.0135717981311126!GO:0000139;Golgi membrane;0.01362741106067!GO:0046128;purine ribonucleoside metabolic process;0.0136597992757053!GO:0042278;purine nucleoside metabolic process;0.0136597992757053!GO:0008047;enzyme activator activity;0.0138282777871456!GO:0043284;biopolymer biosynthetic process;0.0139288722761877!GO:0000792;heterochromatin;0.0139289873899212!GO:0016584;nucleosome positioning;0.0142896689437629!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0143539969932341!GO:0010257;NADH dehydrogenase complex assembly;0.0143539969932341!GO:0033108;mitochondrial respiratory chain complex assembly;0.0143539969932341!GO:0006355;regulation of transcription, DNA-dependent;0.014878083861902!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.014940987495772!GO:0031123;RNA 3'-end processing;0.0150157213499735!GO:0016605;PML body;0.0153339746801949!GO:0005669;transcription factor TFIID complex;0.0156248813724198!GO:0030137;COPI-coated vesicle;0.0158272840556362!GO:0016788;hydrolase activity, acting on ester bonds;0.0159376427370843!GO:0003756;protein disulfide isomerase activity;0.0159376427370843!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0159376427370843!GO:0008097;5S rRNA binding;0.0159376427370843!GO:0048522;positive regulation of cellular process;0.0160576678069892!GO:0006783;heme biosynthetic process;0.0162245339053384!GO:0008320;protein transmembrane transporter activity;0.0167349469568588!GO:0006917;induction of apoptosis;0.016751324908119!GO:0009615;response to virus;0.0168557572576489!GO:0008250;oligosaccharyl transferase complex;0.0168557572576489!GO:0009967;positive regulation of signal transduction;0.016860976083327!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0169595680893303!GO:0000175;3'-5'-exoribonuclease activity;0.0171382851505821!GO:0006378;mRNA polyadenylation;0.0172055225417558!GO:0044262;cellular carbohydrate metabolic process;0.0172055225417558!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0175328029833123!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0175808904782816!GO:0018193;peptidyl-amino acid modification;0.017609593452672!GO:0046112;nucleobase biosynthetic process;0.0181292970571592!GO:0050681;androgen receptor binding;0.018421432331889!GO:0000209;protein polyubiquitination;0.0186754241417913!GO:0009081;branched chain family amino acid metabolic process;0.018833803870751!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0198548496248656!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0202641726217783!GO:0000152;nuclear ubiquitin ligase complex;0.0202641726217783!GO:0005663;DNA replication factor C complex;0.0204872464862268!GO:0033367;protein localization in mast cell secretory granule;0.0204872464862268!GO:0033365;protein localization in organelle;0.0204872464862268!GO:0033371;T cell secretory granule organization and biogenesis;0.0204872464862268!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0204872464862268!GO:0033375;protease localization in T cell secretory granule;0.0204872464862268!GO:0042629;mast cell granule;0.0204872464862268!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0204872464862268!GO:0033364;mast cell secretory granule organization and biogenesis;0.0204872464862268!GO:0033380;granzyme B localization in T cell secretory granule;0.0204872464862268!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0204872464862268!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0204872464862268!GO:0033368;protease localization in mast cell secretory granule;0.0204872464862268!GO:0033366;protein localization in secretory granule;0.0204872464862268!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0204872464862268!GO:0033374;protein localization in T cell secretory granule;0.0204872464862268!GO:0000096;sulfur amino acid metabolic process;0.0205410571059676!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0208453611617785!GO:0008538;proteasome activator activity;0.0210270063002247!GO:0046519;sphingoid metabolic process;0.0211943776080592!GO:0012502;induction of programmed cell death;0.0214779316754887!GO:0022884;macromolecule transmembrane transporter activity;0.0216928154553056!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0216928154553056!GO:0005869;dynactin complex;0.021819583265775!GO:0006301;postreplication repair;0.021885264606471!GO:0046983;protein dimerization activity;0.0219159263598674!GO:0007040;lysosome organization and biogenesis;0.0219159263598674!GO:0035267;NuA4 histone acetyltransferase complex;0.0227266692335794!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.022819046583063!GO:0045039;protein import into mitochondrial inner membrane;0.022819046583063!GO:0030522;intracellular receptor-mediated signaling pathway;0.0229489905263076!GO:0030118;clathrin coat;0.0229631451101994!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0238724525409599!GO:0000819;sister chromatid segregation;0.0246717822647163!GO:0008213;protein amino acid alkylation;0.0247077009853661!GO:0006479;protein amino acid methylation;0.0247077009853661!GO:0051098;regulation of binding;0.0247761325146822!GO:0004448;isocitrate dehydrogenase activity;0.0247946542764362!GO:0030041;actin filament polymerization;0.0251012122215037!GO:0005765;lysosomal membrane;0.0251012122215037!GO:0008270;zinc ion binding;0.0251741405175184!GO:0051318;G1 phase;0.0252148537652278!GO:0043549;regulation of kinase activity;0.025292346029693!GO:0043241;protein complex disassembly;0.0253849612434238!GO:0000910;cytokinesis;0.0254100832638093!GO:0005095;GTPase inhibitor activity;0.0254284447410703!GO:0043300;regulation of leukocyte degranulation;0.025455259357408!GO:0051338;regulation of transferase activity;0.0259789994412224!GO:0051320;S phase;0.0263051269113052!GO:0030119;AP-type membrane coat adaptor complex;0.0264633137823548!GO:0022411;cellular component disassembly;0.0265078122879618!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0265910370210068!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0266531478623877!GO:0000070;mitotic sister chromatid segregation;0.0274395303094565!GO:0006007;glucose catabolic process;0.0275033572381868!GO:0003988;acetyl-CoA C-acyltransferase activity;0.027918702939637!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0282150618599425!GO:0044437;vacuolar part;0.0284885496198089!GO:0009303;rRNA transcription;0.0286523936777765!GO:0009262;deoxyribonucleotide metabolic process;0.0287406140002408!GO:0009119;ribonucleoside metabolic process;0.0296814254940328!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0296833701628975!GO:0006400;tRNA modification;0.0302323282871658!GO:0050662;coenzyme binding;0.030371988628076!GO:0005784;translocon complex;0.0305200636529685!GO:0000781;chromosome, telomeric region;0.0308558319934013!GO:0007033;vacuole organization and biogenesis;0.0311491222176191!GO:0044438;microbody part;0.0311641000193415!GO:0044439;peroxisomal part;0.0311641000193415!GO:0007050;cell cycle arrest;0.0316354761930966!GO:0018196;peptidyl-asparagine modification;0.0317746381720463!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0317746381720463!GO:0000080;G1 phase of mitotic cell cycle;0.0327692810301794!GO:0031371;ubiquitin conjugating enzyme complex;0.0328007931509222!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0328101541356989!GO:0000793;condensed chromosome;0.0331578648989408!GO:0005791;rough endoplasmic reticulum;0.0333430986977342!GO:0008143;poly(A) binding;0.0334167051458798!GO:0046914;transition metal ion binding;0.0337794326130912!GO:0022406;membrane docking;0.0337835643511637!GO:0048278;vesicle docking;0.0337835643511637!GO:0007004;telomere maintenance via telomerase;0.0341817971731223!GO:0019377;glycolipid catabolic process;0.034667477521775!GO:0045859;regulation of protein kinase activity;0.0346821321687593!GO:0032404;mismatch repair complex binding;0.0346940191938217!GO:0030658;transport vesicle membrane;0.0358896708398679!GO:0045892;negative regulation of transcription, DNA-dependent;0.0360834352271456!GO:0008637;apoptotic mitochondrial changes;0.0362011944561716!GO:0019783;small conjugating protein-specific protease activity;0.0362211632803714!GO:0006266;DNA ligation;0.0369935855520861!GO:0000303;response to superoxide;0.037307377693974!GO:0044450;microtubule organizing center part;0.037339609129135!GO:0006607;NLS-bearing substrate import into nucleus;0.0374974534122815!GO:0019206;nucleoside kinase activity;0.0377189125373423!GO:0043189;H4/H2A histone acetyltransferase complex;0.0377189125373423!GO:0032603;fractalkine production;0.0377189125373423!GO:0050725;positive regulation of interleukin-1 beta biosynthetic process;0.0377189125373423!GO:0050752;regulation of fractalkine biosynthetic process;0.0377189125373423!GO:0045362;positive regulation of interleukin-1 biosynthetic process;0.0377189125373423!GO:0050754;positive regulation of fractalkine biosynthetic process;0.0377189125373423!GO:0001774;microglial cell activation;0.0377189125373423!GO:0050756;fractalkine metabolic process;0.0377189125373423!GO:0005766;primary lysosome;0.0377189125373423!GO:0050751;fractalkine biosynthetic process;0.0377189125373423!GO:0042222;interleukin-1 biosynthetic process;0.0377189125373423!GO:0050722;regulation of interleukin-1 beta biosynthetic process;0.0377189125373423!GO:0045360;regulation of interleukin-1 biosynthetic process;0.0377189125373423!GO:0042582;azurophil granule;0.0377189125373423!GO:0050720;interleukin-1 beta biosynthetic process;0.0377189125373423!GO:0030131;clathrin adaptor complex;0.0383298647361686!GO:0006644;phospholipid metabolic process;0.0384920374964644!GO:0008022;protein C-terminus binding;0.0388159759913933!GO:0031301;integral to organelle membrane;0.0389518143993274!GO:0006904;vesicle docking during exocytosis;0.0390743536119695!GO:0016860;intramolecular oxidoreductase activity;0.0399207388082028!GO:0008537;proteasome activator complex;0.0406010312867627!GO:0004674;protein serine/threonine kinase activity;0.0406799870760401!GO:0009083;branched chain family amino acid catabolic process;0.0409456869468847!GO:0015923;mannosidase activity;0.0410173146385946!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0412060668522153!GO:0004843;ubiquitin-specific protease activity;0.0412568202272539!GO:0004177;aminopeptidase activity;0.0412947785475501!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0413073818874786!GO:0008156;negative regulation of DNA replication;0.0413073818874786!GO:0030508;thiol-disulfide exchange intermediate activity;0.0413073818874786!GO:0004300;enoyl-CoA hydratase activity;0.0415532738625328!GO:0016585;chromatin remodeling complex;0.0416169888557192!GO:0031903;microbody membrane;0.0418984347510239!GO:0005778;peroxisomal membrane;0.0418984347510239!GO:0030911;TPR domain binding;0.0421046860857586!GO:0019238;cyclohydrolase activity;0.0421205763511635!GO:0004659;prenyltransferase activity;0.042168937808049!GO:0017134;fibroblast growth factor binding;0.0423241960571375!GO:0043624;cellular protein complex disassembly;0.0428284930896998!GO:0042769;DNA damage response, detection of DNA damage;0.0430012937685782!GO:0006733;oxidoreduction coenzyme metabolic process;0.0430729126197772!GO:0004197;cysteine-type endopeptidase activity;0.0436667455881802!GO:0030134;ER to Golgi transport vesicle;0.0438930333227275!GO:0005652;nuclear lamina;0.0440162795230506!GO:0030099;myeloid cell differentiation;0.0440706554399212!GO:0032405;MutLalpha complex binding;0.0443740372790301!GO:0000123;histone acetyltransferase complex;0.0445070345853647!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0450526322055365!GO:0006406;mRNA export from nucleus;0.0450526322055365!GO:0002764;immune response-regulating signal transduction;0.0462100561316287!GO:0006633;fatty acid biosynthetic process;0.0463517702729468!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.046689065430909!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.046770066634898!GO:0007259;JAK-STAT cascade;0.0473768687807776!GO:0007041;lysosomal transport;0.0473991227461003!GO:0043299;leukocyte degranulation;0.0475136812710431!GO:0006635;fatty acid beta-oxidation;0.0477629554526414!GO:0046479;glycosphingolipid catabolic process;0.0478617134104846!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0483461151202636!GO:0004523;ribonuclease H activity;0.049067990491538!GO:0008536;Ran GTPase binding;0.0492847674986962!GO:0008173;RNA methyltransferase activity;0.0494262242855222!GO:0005658;alpha DNA polymerase:primase complex;0.0496236929815643!GO:0045576;mast cell activation;0.0499888593387505
|sample_id=12225
|sample_id=12225
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=bone marrow
|sample_tissue=bone marrow
|top_motifs=GATA6:2.27712496324;MYB:2.26122923227;E2F1..5:1.73829194726;ALX1:1.63545220319;POU2F1..3:1.55027386693;ELF1,2,4:1.47134997852;DMAP1_NCOR{1,2}_SMARC:1.2371981594;FOX{I1,J2}:1.18090026922;PBX1:1.17513699817;SPIB:1.13879415937;STAT1,3:1.12532873695;TLX2:1.11080348018;YY1:1.05432857063;NFY{A,B,C}:1.03799480185;NANOG:0.95758896826;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.950322943624;BREu{core}:0.941146298835;ELK1,4_GABP{A,B1}:0.937976777848;RUNX1..3:0.893789039383;NANOG{mouse}:0.80132385514;RFX2..5_RFXANK_RFXAP:0.767055234055;ZNF143:0.724678355373;FOXP3:0.675468925188;CDX1,2,4:0.652613303476;HAND1,2:0.652048306981;ETS1,2:0.630117413345;SPI1:0.624564853209;NR6A1:0.613635897869;OCT4_SOX2{dimer}:0.610144652133;NFIL3:0.605437278274;PAX4:0.580607735411;HIF1A:0.537801025312;ARID5B:0.517237005518;NR5A1,2:0.504927057388;NRF1:0.489582768629;FOXA2:0.482544754882;PAX6:0.466066515278;RFX1:0.462260582359;NKX6-1,2:0.459426623199;AIRE:0.457581130791;IRF1,2:0.448553785811;POU1F1:0.391519091378;CREB1:0.368707031713;FOXN1:0.35731482802;FOXP1:0.350034968328;CUX2:0.341134603502;STAT5{A,B}:0.333374555284;NKX2-3_NKX2-5:0.290640915861;GFI1:0.27290496278;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.256502044182;PITX1..3:0.232737391295;POU3F1..4:0.228112628384;POU5F1:0.202629627949;SOX{8,9,10}:0.179756290472;MYBL2:0.161015790752;IKZF2:0.154537567398;RBPJ:0.154313466002;ATF5_CREB3:0.137346784085;HBP1_HMGB_SSRP1_UBTF:0.131895728065;bHLH_family:0.119466785309;SOX2:0.0887175245848;MEF2{A,B,C,D}:0.0586054739266;ZEB1:0.0482884414247;HOXA9_MEIS1:0.0463671304453;PAX2:0.0460930897741;TGIF1:0.0250643526175;LEF1_TCF7_TCF7L1,2:0.019498197212;NKX2-1,4:0.00426251822354;T:0.00154553509912;PRRX1,2:-0.0148348496976;DBP:-0.031712711575;NKX2-2,8:-0.0450243892993;XBP1:-0.0451063248141;TBP:-0.0460253109525;ATF4:-0.0474328931396;IRF7:-0.0553817110415;RXR{A,B,G}:-0.0608509631331;AR:-0.0683286616311;GCM1,2:-0.0932128050317;PAX8:-0.110465902864;SOX5:-0.128284559188;SNAI1..3:-0.132469623991;HES1:-0.1343480452;NFKB1_REL_RELA:-0.137054703705;NKX3-1:-0.14825464683;MYOD1:-0.150224122148;CRX:-0.163995035682;FOX{D1,D2}:-0.192517763345;FOX{F1,F2,J1}:-0.246068340614;FOXO1,3,4:-0.247254379152;NHLH1,2:-0.263385469361;TOPORS:-0.275485845335;TEF:-0.282875921865;SREBF1,2:-0.287416355462;HNF4A_NR2F1,2:-0.321623681552;RORA:-0.32579497227;LMO2:-0.357595785846;HNF1A:-0.358594976605;EVI1:-0.378259497775;PAX5:-0.378722018785;ZNF148:-0.381538083382;PDX1:-0.391112729354;VSX1,2:-0.406271538956;BPTF:-0.410498711983;REST:-0.421147008059;ZBTB16:-0.452988650336;GZF1:-0.456992130011;MYFfamily:-0.462512914488;CEBPA,B_DDIT3:-0.466613982096;FOXQ1:-0.467982188518;ESRRA:-0.480480836816;TFAP4:-0.497060657327;ESR1:-0.515836042577;PPARG:-0.523218187114;ZFP161:-0.532357683392;NFE2:-0.554681663998;HOX{A4,D4}:-0.558053333798;RXRA_VDR{dimer}:-0.570359577068;ATF2:-0.597941624905;SOX17:-0.604129041225;LHX3,4:-0.610493019701;EP300:-0.619368796825;FOSL2:-0.621773868458;ZNF238:-0.626048724805;NFATC1..3:-0.627909068766;SRF:-0.662477506993;TAL1_TCF{3,4,12}:-0.67551868362;AHR_ARNT_ARNT2:-0.68259884558;HLF:-0.684102453854;MZF1:-0.685237535681;PAX3,7:-0.685430534812;HIC1:-0.685532316105;FOS_FOS{B,L1}_JUN{B,D}:-0.688238034193;FOXD3:-0.691687721283;HSF1,2:-0.696307090937;MTF1:-0.70436609148;BACH2:-0.726099421144;TFDP1:-0.738387580784;HOX{A5,B5}:-0.770611593107;EBF1:-0.773836780079;MAFB:-0.774894839474;HMX1:-0.780294032583;EN1,2:-0.810562574538;POU6F1:-0.81278724361;FOXL1:-0.830211325771;PRDM1:-0.857430691612;STAT2,4,6:-0.862081840918;JUN:-0.865234980011;TBX4,5:-0.8652870814;HOX{A6,A7,B6,B7}:-0.873741117235;TFAP2B:-0.888409960862;NFE2L2:-0.894134440867;MTE{core}:-0.897245464494;ZNF423:-0.931697602811;PATZ1:-0.937108415271;GLI1..3:-0.942535222437;ADNP_IRX_SIX_ZHX:-0.95708530842;ALX4:-0.957182245539;SP1:-0.963133759366;ONECUT1,2:-0.973299876775;GTF2I:-0.979099146363;KLF4:-0.983070574105;GATA4:-0.984377273291;SMAD1..7,9:-0.993246500611;TFAP2{A,C}:-0.997040948333;XCPE1{core}:-1.03413298737;MAZ:-1.03469485342;ZBTB6:-1.06075434236;TLX1..3_NFIC{dimer}:-1.06599841845;FOXM1:-1.07260994374;EGR1..3:-1.08183954457;NFE2L1:-1.10588159291;TP53:-1.14089530894;NFIX:-1.15601605887;MED-1{core}:-1.18254562541;GTF2A1,2:-1.18639551775;UFEwm:-1.1933827259;CDC5L:-1.23009931138;ZIC1..3:-1.25578228712;TEAD1:-1.26049646998;ATF6:-1.26134494367;IKZF1:-1.26695610954;PAX1,9:-1.30393888873;ZNF384:-1.33468604414;GFI1B:-1.39677622162;NKX3-2:-1.41457867517;HMGA1,2:-1.41824991798;NR1H4:-1.48874136042;RREB1:-1.50109665083;TFCP2:-1.83282749254;SPZ1:-1.83589339203;NR3C1:-1.8624468977
|top_motifs=GATA6:2.27712496324;MYB:2.26122923227;E2F1..5:1.73829194726;ALX1:1.63545220319;POU2F1..3:1.55027386693;ELF1,2,4:1.47134997852;DMAP1_NCOR{1,2}_SMARC:1.2371981594;FOX{I1,J2}:1.18090026922;PBX1:1.17513699817;SPIB:1.13879415937;STAT1,3:1.12532873695;TLX2:1.11080348018;YY1:1.05432857063;NFY{A,B,C}:1.03799480185;NANOG:0.95758896826;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.950322943624;BREu{core}:0.941146298835;ELK1,4_GABP{A,B1}:0.937976777848;RUNX1..3:0.893789039383;NANOG{mouse}:0.80132385514;RFX2..5_RFXANK_RFXAP:0.767055234055;ZNF143:0.724678355373;FOXP3:0.675468925188;CDX1,2,4:0.652613303476;HAND1,2:0.652048306981;ETS1,2:0.630117413345;SPI1:0.624564853209;NR6A1:0.613635897869;OCT4_SOX2{dimer}:0.610144652133;NFIL3:0.605437278274;PAX4:0.580607735411;HIF1A:0.537801025312;ARID5B:0.517237005518;NR5A1,2:0.504927057388;NRF1:0.489582768629;FOXA2:0.482544754882;PAX6:0.466066515278;RFX1:0.462260582359;NKX6-1,2:0.459426623199;AIRE:0.457581130791;IRF1,2:0.448553785811;POU1F1:0.391519091378;CREB1:0.368707031713;FOXN1:0.35731482802;FOXP1:0.350034968328;CUX2:0.341134603502;STAT5{A,B}:0.333374555284;NKX2-3_NKX2-5:0.290640915861;GFI1:0.27290496278;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.256502044182;PITX1..3:0.232737391295;POU3F1..4:0.228112628384;POU5F1:0.202629627949;SOX{8,9,10}:0.179756290472;MYBL2:0.161015790752;IKZF2:0.154537567398;RBPJ:0.154313466002;ATF5_CREB3:0.137346784085;HBP1_HMGB_SSRP1_UBTF:0.131895728065;bHLH_family:0.119466785309;SOX2:0.0887175245848;MEF2{A,B,C,D}:0.0586054739266;ZEB1:0.0482884414247;HOXA9_MEIS1:0.0463671304453;PAX2:0.0460930897741;TGIF1:0.0250643526175;LEF1_TCF7_TCF7L1,2:0.019498197212;NKX2-1,4:0.00426251822354;T:0.00154553509912;PRRX1,2:-0.0148348496976;DBP:-0.031712711575;NKX2-2,8:-0.0450243892993;XBP1:-0.0451063248141;TBP:-0.0460253109525;ATF4:-0.0474328931396;IRF7:-0.0553817110415;RXR{A,B,G}:-0.0608509631331;AR:-0.0683286616311;GCM1,2:-0.0932128050317;PAX8:-0.110465902864;SOX5:-0.128284559188;SNAI1..3:-0.132469623991;HES1:-0.1343480452;NFKB1_REL_RELA:-0.137054703705;NKX3-1:-0.14825464683;MYOD1:-0.150224122148;CRX:-0.163995035682;FOX{D1,D2}:-0.192517763345;FOX{F1,F2,J1}:-0.246068340614;FOXO1,3,4:-0.247254379152;NHLH1,2:-0.263385469361;TOPORS:-0.275485845335;TEF:-0.282875921865;SREBF1,2:-0.287416355462;HNF4A_NR2F1,2:-0.321623681552;RORA:-0.32579497227;LMO2:-0.357595785846;HNF1A:-0.358594976605;EVI1:-0.378259497775;PAX5:-0.378722018785;ZNF148:-0.381538083382;PDX1:-0.391112729354;VSX1,2:-0.406271538956;BPTF:-0.410498711983;REST:-0.421147008059;ZBTB16:-0.452988650336;GZF1:-0.456992130011;MYFfamily:-0.462512914488;CEBPA,B_DDIT3:-0.466613982096;FOXQ1:-0.467982188518;ESRRA:-0.480480836816;TFAP4:-0.497060657327;ESR1:-0.515836042577;PPARG:-0.523218187114;ZFP161:-0.532357683392;NFE2:-0.554681663998;HOX{A4,D4}:-0.558053333798;RXRA_VDR{dimer}:-0.570359577068;ATF2:-0.597941624905;SOX17:-0.604129041225;LHX3,4:-0.610493019701;EP300:-0.619368796825;FOSL2:-0.621773868458;ZNF238:-0.626048724805;NFATC1..3:-0.627909068766;SRF:-0.662477506993;TAL1_TCF{3,4,12}:-0.67551868362;AHR_ARNT_ARNT2:-0.68259884558;HLF:-0.684102453854;MZF1:-0.685237535681;PAX3,7:-0.685430534812;HIC1:-0.685532316105;FOS_FOS{B,L1}_JUN{B,D}:-0.688238034193;FOXD3:-0.691687721283;HSF1,2:-0.696307090937;MTF1:-0.70436609148;BACH2:-0.726099421144;TFDP1:-0.738387580784;HOX{A5,B5}:-0.770611593107;EBF1:-0.773836780079;MAFB:-0.774894839474;HMX1:-0.780294032583;EN1,2:-0.810562574538;POU6F1:-0.81278724361;FOXL1:-0.830211325771;PRDM1:-0.857430691612;STAT2,4,6:-0.862081840918;JUN:-0.865234980011;TBX4,5:-0.8652870814;HOX{A6,A7,B6,B7}:-0.873741117235;TFAP2B:-0.888409960862;NFE2L2:-0.894134440867;MTE{core}:-0.897245464494;ZNF423:-0.931697602811;PATZ1:-0.937108415271;GLI1..3:-0.942535222437;ADNP_IRX_SIX_ZHX:-0.95708530842;ALX4:-0.957182245539;SP1:-0.963133759366;ONECUT1,2:-0.973299876775;GTF2I:-0.979099146363;KLF4:-0.983070574105;GATA4:-0.984377273291;SMAD1..7,9:-0.993246500611;TFAP2{A,C}:-0.997040948333;XCPE1{core}:-1.03413298737;MAZ:-1.03469485342;ZBTB6:-1.06075434236;TLX1..3_NFIC{dimer}:-1.06599841845;FOXM1:-1.07260994374;EGR1..3:-1.08183954457;NFE2L1:-1.10588159291;TP53:-1.14089530894;NFIX:-1.15601605887;MED-1{core}:-1.18254562541;GTF2A1,2:-1.18639551775;UFEwm:-1.1933827259;CDC5L:-1.23009931138;ZIC1..3:-1.25578228712;TEAD1:-1.26049646998;ATF6:-1.26134494367;IKZF1:-1.26695610954;PAX1,9:-1.30393888873;ZNF384:-1.33468604414;GFI1B:-1.39677622162;NKX3-2:-1.41457867517;HMGA1,2:-1.41824991798;NR1H4:-1.48874136042;RREB1:-1.50109665083;TFCP2:-1.83282749254;SPZ1:-1.83589339203;NR3C1:-1.8624468977
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12225-129F2;search_select_hide=table117:FF:12225-129F2
}}
}}

Latest revision as of 18:35, 4 June 2020

Name:CD34+ stem cells - adult bone marrow derived, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12588,CNhs12553
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone marrow
dev stageNA
sexNA
ageNA
cell typestem cell
cell lineNA
companyStem cell technologies
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005703
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12588 CAGE DRX008175 DRR009047
CNhs12553 CAGE DRX022801 DRR025140
Accession ID Hg19

Library idBAMCTSS
CNhs12588 DRZ000472 DRZ001857
CNhs12553 DRZ003565 DRZ004448
Accession ID Hg38

Library idBAMCTSS
CNhs12588 DRZ011822 DRZ013207
CNhs12553 DRZ008306 DRZ009189
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0442
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.459
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.0213
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0782
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.108
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0507
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.134
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.313
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0126
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0.528
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.102
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0774
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.814
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.366
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.671
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0559
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.218
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.102
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.83
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.102
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.229
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.381
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.102
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.148
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.184
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0.102
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.374
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



No results for this sample



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12588

Jaspar motifP-value
MA0002.20.0194
MA0003.10.525
MA0004.10.215
MA0006.10.463
MA0007.10.968
MA0009.10.599
MA0014.10.606
MA0017.10.196
MA0018.20.721
MA0019.10.0273
MA0024.14.04704e-10
MA0025.10.0757
MA0027.10.131
MA0028.17.78227e-8
MA0029.10.757
MA0030.10.52
MA0031.10.832
MA0035.22.12003e-5
MA0038.10.232
MA0039.20.858
MA0040.10.325
MA0041.10.53
MA0042.10.596
MA0043.10.0302
MA0046.10.702
MA0047.20.237
MA0048.10.402
MA0050.11.49998e-4
MA0051.18.89644e-4
MA0052.10.27
MA0055.10.126
MA0057.10.767
MA0058.10.132
MA0059.10.00566
MA0060.11.14086e-4
MA0061.10.672
MA0062.21.79113e-14
MA0065.20.1
MA0066.10.641
MA0067.10.493
MA0068.10.00701
MA0069.10.0673
MA0070.10.444
MA0071.10.405
MA0072.10.336
MA0073.10.524
MA0074.10.201
MA0076.11.02264e-10
MA0077.10.546
MA0078.10.408
MA0079.20.682
MA0080.21.75788e-10
MA0081.19.66066e-5
MA0083.11.55185e-4
MA0084.10.555
MA0087.10.261
MA0088.10.00496
MA0090.15.64708e-6
MA0091.10.72
MA0092.10.575
MA0093.10.21
MA0099.23.5419e-12
MA0100.11.16358e-6
MA0101.10.354
MA0102.20.0216
MA0103.10.761
MA0104.23.42392e-4
MA0105.10.12
MA0106.10.185
MA0107.10.0211
MA0108.20.00247
MA0111.10.434
MA0112.20.746
MA0113.10.543
MA0114.10.193
MA0115.10.226
MA0116.10.00205
MA0117.10.911
MA0119.10.942
MA0122.10.595
MA0124.10.275
MA0125.10.981
MA0131.10.0021
MA0135.10.885
MA0136.11.17042e-19
MA0137.20.967
MA0138.20.801
MA0139.10.827
MA0140.17.10889e-8
MA0141.10.817
MA0142.10.418
MA0143.10.933
MA0144.10.406
MA0145.10.133
MA0146.10.0875
MA0147.13.33557e-4
MA0148.10.071
MA0149.10.116
MA0150.10.0135
MA0152.10.148
MA0153.10.039
MA0154.10.176
MA0155.10.863
MA0156.13.91083e-16
MA0157.10.986
MA0159.10.653
MA0160.10.34
MA0162.10.58
MA0163.18.51862e-12
MA0164.10.441
MA0258.10.993
MA0259.10.117


library id: CNhs12553This sample isn't target for the analysis



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12588

Novel motifP-value
10.429
100.0192
1000.411
1010.424
1020.899
1030.908
1040.819
1050.614
1060.279
1070.0343
1080.0763
1090.26
110.157
1100.284
1110.6
1120.972
1130.883
1140.918
1150.336
1160.644
1170.0201
1180.0974
1190.19
120.244
1200.597
1210.237
1220.949
1230.12
1240.49
1250.0188
1260.291
1270.338
1280.594
1290.0753
130.00665
1300.664
1310.224
1320.243
1330.366
1340.76
1350.481
1360.0579
1370.105
1380.558
1390.707
140.992
1400.242
1410.445
1420.582
1430.321
1440.614
1450.555
1460.293
1470.0101
1480.662
1490.227
150.863
1500.955
1510.802
1520.211
1530.353
1540.77
1550.013
1560.939
1570.0825
1580.408
1590.0558
160.415
1600.7
1610.422
1620.921
1630.301
1640.145
1650.345
1660.305
1670.243
1680.909
1690.651
170.221
180.0322
190.617
20.239
200.443
210.968
220.573
231.04664e-4
240.517
250.0726
260.345
270.998
280.859
290.0285
30.246
300.0687
310.201
320.015
330.225
340.981
350.76
360.0363
370.274
380.792
390.264
40.808
400.0994
410.69
420.239
430.611
440.942
450.257
460.885
470.103
480.0991
490.915
50.462
500.71
510.984
520.146
530.484
540.21
550.383
560.714
570.672
580.444
590.929
60.394
600.383
610.0724
620.397
630.519
640.216
650.062
660.675
670.952
680.134
690.381
70.112
700.103
710.156
720.221
730.97
740.5
750.0475
760.169
770.0594
780.692
790.14
80.291
800.797
810.983
820.859
830.0222
840.409
850.045
860.562
870.0372
880.486
890.162
90.743
900.257
910.476
920.0475
930.903
940.708
950.0809
960.833
970.569
980.758
990.079


library id: CNhs12553This sample isn't target for the analysis



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12588
library id: CNhs12553


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000034 (stem cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000021 (hematopoietic stem cell sample)
0000026 (human CD34-positive hematopoietic stem cell sample)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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