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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000468,UBERON:0000922,UBERON:0001062
|DRA_sample_Accession=CAGE@SAMD00004802
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000055,CL:0000063,CL:0000066,CL:0000075,CL:0000133,CL:0000144,CL:0000147,CL:0000148,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000325,CL:0000333,CL:0000541,CL:0000548,CL:0000710,CL:0002077,CL:0002321,CL:0002322,CL:0002371
|accession_numbers=CAGE;DRX008583;DRR009455;DRZ000880;DRZ002265;DRZ012230;DRZ013615
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000061,UBERON:0000465,UBERON:0001062
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002321,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000147,CL:0000710,CL:0000255,CL:0002077,CL:0000034,CL:0000148,CL:0002322
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101581,FF:0000350,FF:0000334,FF:0000380,FF:0000400,FF:0100669,FF:0000532
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|donor= biol_rep1 (H9EB-1 d0)
|expression_enrichment_score=chr20:31350184..31350200,+!p1@DNMT3B!2.50!628.03!DNMT3B;;chr10:135043702..135043729,+!p1@UTF1!2.16!144.66!UTF1;;chr3:181429704..181429722,+!p1@SOX2!2.14!136.41!SOX2;;chr8:145701192..145701241,-!p1@FOXH1!2.07!115.38!FOXH1;;chr6:31138439..31138475,-!p1@POU5F1!2.03!106.09!POU5F1;;chr8:73921136..73921151,+!p2@TERF1!2.00!146.40!TERF1;;chr4:188916918..188916942,+!p1@ZFP42!1.93!83.66!ZFP42;;chr1:6304233..6304243,+!p1@HES3!1.92!82.27!HES3;;chr5:153857778..153857794,-!p1@HAND1!1.80!62.63!HAND1;;chr16:3149278..3149305,-!p1@ZSCAN10!1.76!57.05!ZSCAN10;;chr8:70983476..70983493,-!p1@PRDM14!1.68!46.71!PRDM14;;chrX:136648279..136648295,+!p1@ZIC3!1.65!43.46!ZIC3;;chr2:16080659..16080685,+!p1@MYCN!1.61!39.74!MYCN;;chr2:5832508..5832524,+!p1@SOX11!1.61!39.62!SOX11;;chr11:63684602..63684664,-!p1@RCOR2!1.60!74.83!RCOR2;;chr3:181429741..181429767,+!p2@SOX2!1.58!37.07!SOX2;;chr13:100634031..100634045,+!p1@ZIC2!1.57!36.48!ZIC2;;chr13:100623375..100623425,-!p1@ZIC5!1.56!34.97!ZIC5;;chr9:114287433..114287513,+!p1@ZNF483!1.54!84.59!ZNF483;;chr14:57272369..57272391,-!p2@OTX2!1.53!32.53!OTX2;;chr20:50418972..50419029,-!p1@SALL4!1.52!31.84!SALL4;;chr6:15246200..15246214,+!p2@JARID2!1.46!74.13!JARID2;;chr14:22005197..22005261,-!p3@SALL2!1.46!28.00!SALL2;;chr17:7493405..7493419,-!p1@SOX15!1.46!27.89!SOX15;;chr2:25475120..25475176,-!p2@DNMT3A!1.44!35.67!DNMT3A;;chr19:20188776..20188826,+!p1@ZNF90!1.42!66.81!ZNF90;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.42!25.10!ZBED1;;chr12:7941989..7942014,+!p1@NANOG!1.39!23.82!NANOG;;chr3:170076314..170076334,+!p2@SKIL!1.36!28.35!SKIL;;chr6:137815524..137815537,-!p1@OLIG3!1.36!22.08!OLIG3;;chr3:185797712..185797746,-!p6@ETV5!1.36!21.84!ETV5;;chr10:135043493..135043510,+!p2@UTF1!1.36!21.73!UTF1;;chr1:164528687..164528711,+!p6@PBX1!1.35!24.98!PBX1;;chr2:16081912..16081931,+!p2@MYCN!1.35!21.61!MYCN;;chrX:136648643..136648711,+!p2@ZIC3!1.35!21.61!ZIC3;;chr2:25475094..25475112,-!p3@DNMT3A!1.35!21.26!DNMT3A;;chr3:57234000..57234014,-!p1@HESX1!1.35!21.26!HESX1;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!1.32!28.24!TGIF2;;chr1:201979703..201979721,+!p2@ELF3!1.31!19.52!ELF3;;chr8:70983443..70983460,-!p2@PRDM14!1.31!19.40!PRDM14;;chr19:45579725..45579743,-!p1@ZNF296!1.27!77.27!ZNF296;;chr8:145701166..145701187,-!p2@FOXH1!1.27!17.78!FOXH1;;chr20:50418128..50418147,-!p2@SALL4!1.27!17.55!SALL4;;chr4:299227..299272,-!p1@ZNF732!1.27!17.43!ZNF732;;chr20:55204351..55204377,+!p1@TFAP2C!1.26!21.73!TFAP2C;;chr5:2751762..2751784,-!p1@IRX2!1.25!16.96!IRX2;;chr8:73921067..73921078,+!p3@TERF1!1.20!23.24!TERF1;;chr19:46800289..46800327,+!p2@HIF3A!1.20!14.87!HIF3A;;chr13:100634004..100634025,+!p2@ZIC2!1.20!14.87!ZIC2;;chr8:55370487..55370503,+!p1@SOX17!1.19!14.41!SOX17;;chr1:201979743..201979762,+!p1@ELF3!1.18!14.06!ELF3;;chr12:66218836..66218888,+!p1@HMGA2!1.16!124.21!HMGA2;;chr10:70320074..70320106,+!p1@TET1!1.16!27.31!TET1;;chr14:21994337..21994442,-!p1@SALL2!1.15!36.60!SALL2;;chr19:46367576..46367592,+!p1@FOXA3!1.13!12.55!FOXA3;;chr2:88752207..88752218,-!p1@FOXI3!1.13!12.55!FOXI3;;chr2:16082155..16082169,+!p3@MYCN!1.12!12.32!MYCN;;chr5:2751785..2751808,-!p2@IRX2!1.12!12.20!IRX2;;chr1:63788229..63788250,+!p1@FOXD3!1.10!11.62!FOXD3;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!1.09!24.52!SOHLH2;;chr9:127533519..127533573,-!p2@NR6A1!1.09!13.59!NR6A1;;chr8:70983506..70983522,-!p3@PRDM14!1.09!11.39!PRDM14;;chr3:48282587..48282603,+!p1@ZNF589!1.08!49.85!ZNF589;;chr18:56531584..56531646,+!p4@ZNF532!1.08!14.52!ZNF532;;chr19:23299814..23299844,+!p1@ZNF730!1.08!13.59!ZNF730;;chr10:135122906..135122921,+!p4@ZNF511!1.08!10.92!ZNF511;;chr12:19592405..19592492,+!p2@AEBP2!1.07!93.54!AEBP2;;chr20:50419055..50419066,-!p3@SALL4!1.07!10.81!SALL4;;chr2:42795745..42795824,+!p1@MTA3!1.06!98.18!MTA3;;chr17:41622765..41622821,-!p2@ETV4!1.06!15.92!ETV4;;chr10:126138597..126138612,-!p1@NKX1-2!1.06!10.46!NKX1-2;;chr14:57277178..57277203,-!p1@OTX2!1.06!10.46!OTX2;;chr1:226411361..226411366,+!p1@MIXL1!1.06!10.46!MIXL1;;chr6:126070769..126070801,+!p1@HEY2!1.05!11.85!HEY2;;chr3:71355163..71355209,-!p5@FOXP1!1.04!13.94!FOXP1;;chr8:37963466..37963506,+!p3@ASH2L!1.04!12.67!ASH2L;;chr2:223163706..223163730,-!p1@PAX3!1.04!9.88!PAX3;;chr17:47892398..47892407,+!p2@KAT7!1.04!9.88!KAT7;;chrX:136648297..136648319,+!p3@ZIC3!1.04!9.88!ZIC3;;chr4:26322267..26322334,+!p3@RBPJ!1.03!23.59!RBPJ;;chr12:66218183..66218209,+!p4@HMGA2!1.03!19.06!HMGA2;;chr2:5832493..5832507,+!p2@SOX11!1.03!9.76!SOX11;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!1.02!36.72!HNRPK;;chrX:139587228..139587234,-!p1@SOX3!1.02!9.53!SOX3;;chr2:171571827..171571853,+!p1@SP5!1.02!9.41!SP5;;chr17:46132044..46132080,+!p4@NFE2L1!1.02!9.41!NFE2L1;;chr12:66218598..66218645,+!p2@HMGA2!1.01!43.69!HMGA2;;chr18:56940611..56940660,-!p1@RAX!1.01!9.30!RAX;;chr4:174451370..174451387,-!p1@HAND2!1.01!9.18!HAND2;;chr19:23433144..23433204,-!p1@ZNF724P!1.00!41.25!ZNF724P;;chr1:2461692..2461710,-!p1@HES5!1.00!9.06!HES5;;chr11:128457446..128457461,-!p4@ETS1!1.00!8.95!ETS1;;chr7:14028743..14028799,-!p3@ETV1!0.99!11.04!ETV1;;chr13:100638100..100638115,+!p4@ZIC2!0.99!8.83!ZIC2;;chr19:20011775..20011800,+!p2@ZNF93!0.97!15.22!ZNF93;;chr12:66218255..66218304,+!p3@HMGA2!0.96!22.43!HMGA2;;chr18:76740152..76740186,+!p2@SALL3!0.96!8.13!SALL3;;chr16:51185363..51185381,-!p4@SALL1!0.96!8.02!SALL1;;chr19:47523058..47523114,+!p1@NPAS1!0.96!8.02!NPAS1;;chr19:50922187..50922204,+!p1@SPIB!0.96!8.02!SPIB;;chr1:204042233..204042249,+!p1@SOX13!0.95!51.59!SOX13;;chr9:127358120..127358170,-!p3@NR6A1!0.95!7.90!NR6A1;;chr6:21597765..21597779,+!p2@SOX4!0.94!65.30!SOX4;;chr8:37963407..37963454,+!p2@ASH2L!0.94!23.70!ASH2L;;chr12:66218378..66218401,+!p6@HMGA2!0.94!12.32!HMGA2;;chr4:111544219..111544240,-!p1@PITX2!0.94!7.78!PITX2;;chr19:3574330..3574393,+!p2@HMG20B!0.94!7.78!HMG20B;;chr15:57511609..57511651,+!p2@TCF12!0.93!13.01!TCF12;;chr1:209979467..209979494,-!p1@IRF6!0.93!8.60!IRF6;;chr1:38512457..38512474,-!p1@POU3F1!0.93!8.37!POU3F1;;chr19:23299851..23299880,+!p2@ZNF730!0.93!7.55!ZNF730;;chr22:38380543..38380569,-!p1@SOX10!0.92!7.32!SOX10;;chr1:151032922..151032951,+!p2@MLLT11!0.91!12.08!MLLT11;;chr12:66218573..66218596,+!p7@HMGA2!0.91!10.81!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!0.91!10.46!HMGA2;;chr3:170076223..170076242,+!p6@SKIL!0.91!8.13!SKIL;;chr12:66218152..66218174,+!p10@HMGA2!0.91!7.78!HMGA2;;chr2:85360499..85360598,+!p1@TCF7L1!0.90!40.44!TCF7L1;;chr6:1312325..1312340,+!p1@FOXQ1!0.90!11.50!FOXQ1;;chr16:29818199..29818216,+!p11@MAZ!0.89!11.50!MAZ;;chr12:54785074..54785122,-!p2@ZNF385A!0.89!10.57!ZNF385A;;chr17:41622925..41622976,-!p3@ETV4!0.89!10.34!ETV4;;chr17:7197911..7197964,-!p1@YBX2!0.89!6.74!YBX2;;chr10:135043690..135043701,+!p4@UTF1!0.89!6.74!UTF1;;chr19:20011744..20011770,+!p1@ZNF93!0.88!27.07!ZNF93;;chr15:53082521..53082549,-!p1@ONECUT1!0.88!6.51!ONECUT1;;chr13:100634130..100634143,+!p3@ZIC2!0.88!6.51!ZIC2;;chr7:26191809..26191890,+!p1@NFE2L3!0.87!33.46!NFE2L3;;chr6:31869828..31869880,-!p1@ZBTB12!0.87!12.55!ZBTB12;;chr18:56530136..56530199,+!p3@ZNF532!0.87!9.88!ZNF532;;chr16:51185573..51185593,-!p3@SALL1!0.87!6.39!SALL1;;chr19:23941680..23941704,-!p1@ZNF681!0.86!19.17!ZNF681;;chr2:121493425..121493474,+!p1@GLI2!0.86!14.41!GLI2;;chr19:20150268..20150298,-!p2@ZNF682!0.86!12.08!ZNF682;;chr8:70983462..70983471,-!p4@PRDM14!0.86!6.27!PRDM14;;chr14:22005343..22005364,-!p5@SALL2!0.86!6.27!SALL2;;chr17:41623692..41623715,-!p1@ETV4!0.85!27.42!ETV4;;chr11:31825588..31825613,-!p8@PAX6!0.85!6.16!PAX6;;chr12:66218420..66218439,+!p12@HMGA2!0.85!6.16!HMGA2;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!0.85!6.04!MEF2B;;chr6:21593973..21593988,+!p1@SOX4!0.84!225.30!SOX4;;chr6:19837592..19837621,+!p1@ID4!0.84!38.23!ID4;;chr14:21566540..21566580,-!p2@ZNF219!0.84!8.25!ZNF219;;chr6:50786591..50786614,+!p1@TFAP2B!0.84!5.93!TFAP2B;;chr19:20278012..20278034,+!p1@ZNF486!0.83!51.82!ZNF486;;chr14:55493763..55493824,-!p1@WDHD1!0.83!46.71!WDHD1;;chr12:3068544..3068597,+!p1@TEAD4!0.83!37.30!TEAD4;;chr19:47538560..47538591,+!p2@NPAS1!0.83!5.81!NPAS1;;chr12:7941942..7941949,+!p3@NANOG!0.83!5.69!NANOG;;chr2:60780753..60780800,-!p1@BCL11A!0.82!29.51!BCL11A;;chr2:166326200..166326216,+!p1@CSRNP3!0.82!8.48!CSRNP3;;chr7:35293685..35293718,-!p1@TBX20!0.82!5.58!TBX20;;chr12:50479109..50479146,+!p2@SMARCD1!0.81!101.44!SMARCD1;;chr19:22034809..22034878,-!p2@ZNF43!0.81!20.45!ZNF43;;chr17:41623009..41623053,-!p4@ETV4!0.81!9.06!ETV4;;chr8:128428066..128428078,+!p1@POU5F1B!0.81!5.46!POU5F1B;;chr1:93544791..93544807,+!p2@MTF2!0.80!8.48!MTF2;;chr1:247171316..247171336,-!p3@ZNF695!0.80!8.25!ZNF695;;chr5:174151612..174151633,+!p2@MSX2!0.80!5.34!MSX2;;chr16:51185318..51185348,-!p2@SALL1!0.80!5.34!SALL1;;chr3:52002412..52002433,-!p7@PCBP4!0.80!5.34!PCBP4;;chr19:20959098..20959117,+!p1@ZNF66P!0.79!23.24!ZNF66P;;chr5:124084493..124084524,-!p2@ZNF608!0.79!12.08!ZNF608;;chr19:54024251..54024305,+!p4@ZNF331!0.79!8.71!ZNF331;;chr9:127533582..127533615,-!p1@NR6A1!0.79!8.02!NR6A1;;chr19:49864746..49864780,-!p2@TEAD2!0.79!7.32!TEAD2;;chr6:15245797..15245818,+!p8@JARID2!0.79!6.39!JARID2;;chr8:86089627..86089653,+!p3@E2F5!0.79!5.93!E2F5;;chr8:102504651..102504683,+!p1@GRHL2!0.79!5.23!GRHL2;;chr8:11561684..11561751,+!p1@GATA4!0.79!5.23!GATA4;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.79!5.23!SEBOX;;chr14:60975883..60975911,+!p1@SIX6!0.79!5.11!SIX6;;chr14:21994449..21994524,-!p2@SALL2!0.78!16.03!SALL2;;chr19:925727..925784,+!p3@ARID3A!0.78!11.27!ARID3A;;chr6:134210243..134210257,+!p1@TCF21!0.78!5.00!TCF21;;chr2:16080635..16080650,+!p4@MYCN!0.78!5.00!MYCN;;chr2:88752231..88752245,-!p2@FOXI3!0.78!5.00!FOXI3;;chr19:58220517..58220583,-!p1@ZNF154!0.77!16.73!ZNF154;;chrX:84499081..84499115,+!p2@ZNF711!0.77!7.44!ZNF711;;chr20:30193083..30193098,+!p1@ID1!0.76!425.73!ID1;;chr12:7079780..7079791,-!p2@PHB2!0.76!26.96!PHB2;;chr17:46608354..46608385,-!p1@HOXB1!0.76!4.76!HOXB1;;chr7:64363638..64363667,+!p1@ZNF273!0.75!25.45!ZNF273;;chr16:29818160..29818188,+!p6@MAZ!0.75!23.94!MAZ;;chr6:15246217..15246228,+!p3@JARID2!0.75!8.71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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000034;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002322
|ffid_belonging_in_development=CL:0000133,CL:0000221
|fonse_cell_line=FF:0100669
|fonse_cell_line=FF:0100669
|fonse_cell_line_closure=FF:0100669
|fonse_cell_line_closure=FF:0100669
Line 34: Line 43:
|fonse_treatment_closure=EFO:0000369,FF:0000334,FF:0000532,FF:12627-134E8
|fonse_treatment_closure=EFO:0000369,FF:0000334,FF:0000532,FF:12627-134E8
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/H9%2520Embryoid%2520body%2520cells%252c%2520melanocytic%2520induction%252c%2520day00%252c%2520biol_rep1%2520%2528H9EB-1%2520d0%2529.CNhs12822.12627-134E8.hg38.nobarcode.ctss.bed.gz
|id=FF:12627-134E8
|id=FF:12627-134E8
|is_a=EFO:0002091;;FF:0000210;;FF:0000532
|is_a=EFO:0002091;;FF:0000532
|name=H9 Embryoid body cells, melanocytic induction, day00, biol_rep1 (H9EB-1 d0)
|is_obsolete=
|library_id=CNhs12822
|library_id_phase_based=2:CNhs12822
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12627
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12627
|name=H9 Embryoid body cells, melanocytic induction
|namespace=FANTOM5
|namespace=FANTOM5
|part_of=
|part_of=
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs12822,LSID972,release012,COMPLETED
|profile_hcage=CNhs12822,LSID972,release012,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=134
|rna_box=134
|rna_catalog_number=
|rna_catalog_number=
Line 53: Line 77:
|rna_rin=
|rna_rin=
|rna_sample_type=
|rna_sample_type=
|rna_tube_id=134E8
|rna_tube_id=1.34E+10
|rna_weight_ug=7.00
|rna_weight_ug=7
|sample_age=
|sample_age=
|sample_category=time courses
|sample_cell_catalog=
|sample_cell_catalog=
|sample_cell_line=H9
|sample_cell_line=H9
Line 68: Line 93:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=Human ES cell differentiation to melanocyte
|sample_experimental_condition=Human ES cell differentiation to melanocyte
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.51525464195128e-291!GO:0043226;organelle;2.86616745112917e-241!GO:0043229;intracellular organelle;1.12367130109872e-240!GO:0043227;membrane-bound organelle;2.03840227929064e-238!GO:0043231;intracellular membrane-bound organelle;2.03840227929064e-238!GO:0005737;cytoplasm;1.34030787454603e-182!GO:0044422;organelle part;4.58742325055142e-153!GO:0044446;intracellular organelle part;2.09102590066942e-151!GO:0044444;cytoplasmic part;1.15082497603354e-121!GO:0005634;nucleus;3.0025561776007e-118!GO:0032991;macromolecular complex;4.43735841523965e-111!GO:0044238;primary metabolic process;4.43735841523965e-111!GO:0044237;cellular metabolic process;5.54582001896278e-111!GO:0043170;macromolecule metabolic process;1.20549725813585e-104!GO:0030529;ribonucleoprotein complex;3.88349672274749e-96!GO:0044428;nuclear part;5.65343845982259e-86!GO:0003723;RNA binding;1.07856014319299e-84!GO:0043233;organelle lumen;9.17046927176419e-83!GO:0031974;membrane-enclosed lumen;9.17046927176419e-83!GO:0005515;protein binding;1.11726134924031e-82!GO:0005739;mitochondrion;5.92497151281659e-70!GO:0043283;biopolymer metabolic process;6.99113149362715e-67!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.51907115950348e-65!GO:0010467;gene expression;1.31652650156151e-64!GO:0006396;RNA processing;3.75027122885588e-59!GO:0016043;cellular component organization and biogenesis;6.84346147067978e-58!GO:0043234;protein complex;2.30111263730813e-55!GO:0005840;ribosome;5.8258219293577e-55!GO:0031981;nuclear lumen;2.71228468245917e-52!GO:0006412;translation;1.41023914934476e-51!GO:0003735;structural constituent of ribosome;9.30179794310225e-47!GO:0044429;mitochondrial part;1.84246143513024e-46!GO:0016071;mRNA metabolic process;9.05228771318572e-46!GO:0006996;organelle organization and biogenesis;4.40916684095349e-45!GO:0003676;nucleic acid binding;6.81531627993177e-44!GO:0019538;protein metabolic process;4.24834881471946e-43!GO:0008380;RNA splicing;5.11992886100017e-43!GO:0043228;non-membrane-bound organelle;9.41975770574916e-43!GO:0043232;intracellular non-membrane-bound organelle;9.41975770574916e-43!GO:0044249;cellular biosynthetic process;1.05014549782442e-42!GO:0009058;biosynthetic process;3.54137692769933e-42!GO:0033279;ribosomal subunit;4.07281766496535e-42!GO:0031090;organelle membrane;1.71439174107167e-41!GO:0031967;organelle envelope;2.21317406320872e-40!GO:0031975;envelope;5.20543327799137e-40!GO:0006397;mRNA processing;3.49949697879551e-39!GO:0006259;DNA metabolic process;1.71710209277864e-38!GO:0009059;macromolecule biosynthetic process;3.22450014981624e-38!GO:0015031;protein transport;1.3404154825719e-37!GO:0033036;macromolecule localization;1.40544422840475e-37!GO:0065003;macromolecular complex assembly;2.6181568603625e-37!GO:0044260;cellular macromolecule metabolic process;3.459442104569e-37!GO:0044267;cellular protein metabolic process;4.06442272732521e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.2894666019019e-36!GO:0016070;RNA metabolic process;4.9644234164406e-36!GO:0022607;cellular component assembly;1.00459628274044e-35!GO:0046907;intracellular transport;1.74251631319357e-35!GO:0005829;cytosol;7.00975656573609e-35!GO:0008104;protein localization;4.62845458949831e-33!GO:0045184;establishment of protein localization;7.05466114886509e-33!GO:0005681;spliceosome;1.83802890325479e-31!GO:0005654;nucleoplasm;3.01382046253389e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.16755843792146e-29!GO:0007049;cell cycle;7.18705626943869e-29!GO:0019866;organelle inner membrane;4.82267009054752e-28!GO:0005740;mitochondrial envelope;6.36987248747421e-28!GO:0006886;intracellular protein transport;3.3435586818437e-26!GO:0005743;mitochondrial inner membrane;8.56859372997065e-26!GO:0031966;mitochondrial membrane;1.16535231849935e-25!GO:0044451;nucleoplasm part;2.13428616037061e-25!GO:0000166;nucleotide binding;2.67248125407707e-24!GO:0005694;chromosome;3.62788838250564e-24!GO:0051649;establishment of cellular localization;6.13365745321383e-24!GO:0044445;cytosolic part;7.01596397150562e-24!GO:0006119;oxidative phosphorylation;9.31455843905942e-23!GO:0051641;cellular localization;9.49748878028539e-23!GO:0005730;nucleolus;2.39638965248497e-22!GO:0006974;response to DNA damage stimulus;2.39638965248497e-22!GO:0031980;mitochondrial lumen;3.10707348004656e-22!GO:0005759;mitochondrial matrix;3.10707348004656e-22!GO:0044455;mitochondrial membrane part;3.19726317473368e-22!GO:0000278;mitotic cell cycle;7.1282030318623e-22!GO:0022402;cell cycle process;1.11245980914415e-21!GO:0015934;large ribosomal subunit;1.38454418669745e-21!GO:0015935;small ribosomal subunit;1.38454418669745e-21!GO:0044427;chromosomal part;2.07214772664302e-21!GO:0051276;chromosome organization and biogenesis;1.39646275194275e-20!GO:0022618;protein-RNA complex assembly;3.70248030365986e-20!GO:0016462;pyrophosphatase activity;2.12569934856931e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.42503226938621e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;4.87881564679867e-19!GO:0000087;M phase of mitotic cell cycle;1.04257055139913e-18!GO:0022403;cell cycle phase;1.84040058239758e-18!GO:0007067;mitosis;2.43909696180632e-18!GO:0017111;nucleoside-triphosphatase activity;2.58732762640972e-18!GO:0016874;ligase activity;2.58732762640972e-18!GO:0044265;cellular macromolecule catabolic process;4.91115189529232e-18!GO:0006281;DNA repair;8.58231765500338e-18!GO:0051301;cell division;1.42586879243528e-17!GO:0006457;protein folding;1.67352533328956e-17!GO:0048770;pigment granule;4.33787911747464e-17!GO:0042470;melanosome;4.33787911747464e-17!GO:0005746;mitochondrial respiratory chain;1.03694823461477e-16!GO:0005761;mitochondrial ribosome;1.06818027429316e-16!GO:0000313;organellar ribosome;1.06818027429316e-16!GO:0008135;translation factor activity, nucleic acid binding;1.20686102457233e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;1.6605185325563e-16!GO:0000375;RNA splicing, via transesterification reactions;1.6605185325563e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.6605185325563e-16!GO:0042254;ribosome biogenesis and assembly;1.99687766579531e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.84826315715127e-16!GO:0003954;NADH dehydrogenase activity;2.84826315715127e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.84826315715127e-16!GO:0006512;ubiquitin cycle;3.35210253744327e-16!GO:0000279;M phase;3.35210253744327e-16!GO:0006260;DNA replication;3.93399756633624e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;4.00000617764682e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;4.03290623675662e-16!GO:0012505;endomembrane system;4.41887110489362e-16!GO:0008134;transcription factor binding;4.57626360655191e-16!GO:0043285;biopolymer catabolic process;4.86881198196269e-16!GO:0019941;modification-dependent protein catabolic process;6.77472396946406e-16!GO:0043632;modification-dependent macromolecule catabolic process;6.77472396946406e-16!GO:0006511;ubiquitin-dependent protein catabolic process;9.49665049761146e-16!GO:0009057;macromolecule catabolic process;9.49919385877469e-16!GO:0044257;cellular protein catabolic process;9.70180923849903e-16!GO:0032553;ribonucleotide binding;9.89072689815043e-16!GO:0032555;purine ribonucleotide binding;9.89072689815043e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.03956823197839e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.46438532340768e-15!GO:0006323;DNA packaging;2.0026988089564e-15!GO:0009719;response to endogenous stimulus;2.84315228310371e-15!GO:0044248;cellular catabolic process;3.70430261824385e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.94222256528142e-15!GO:0017076;purine nucleotide binding;7.22000836166525e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.14817509735148e-14!GO:0042775;organelle ATP synthesis coupled electron transport;5.39410984846168e-14!GO:0042773;ATP synthesis coupled electron transport;5.39410984846168e-14!GO:0030964;NADH dehydrogenase complex (quinone);5.39410984846168e-14!GO:0045271;respiratory chain complex I;5.39410984846168e-14!GO:0005747;mitochondrial respiratory chain complex I;5.39410984846168e-14!GO:0031965;nuclear membrane;5.90669538150021e-14!GO:0030163;protein catabolic process;7.13313185777927e-14!GO:0006605;protein targeting;1.34198055853008e-13!GO:0051082;unfolded protein binding;1.55303221713227e-13!GO:0050794;regulation of cellular process;1.78593917563069e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.84329292192529e-13!GO:0005794;Golgi apparatus;2.21050644834685e-13!GO:0005635;nuclear envelope;2.51259600394507e-13!GO:0044453;nuclear membrane part;4.09136770796498e-13!GO:0005524;ATP binding;5.58688829996029e-13!GO:0051186;cofactor metabolic process;9.22208496236967e-13!GO:0032559;adenyl ribonucleotide binding;1.21634815481345e-12!GO:0016604;nuclear body;1.9221961306629e-12!GO:0005643;nuclear pore;2.13648099586574e-12!GO:0006413;translational initiation;2.67406173020858e-12!GO:0006403;RNA localization;3.80401766674095e-12!GO:0006399;tRNA metabolic process;3.96999310581283e-12!GO:0003743;translation initiation factor activity;6.05623384066736e-12!GO:0043412;biopolymer modification;7.16505956025248e-12!GO:0006446;regulation of translational initiation;8.09114572634693e-12!GO:0050657;nucleic acid transport;8.33042150926145e-12!GO:0051236;establishment of RNA localization;8.33042150926145e-12!GO:0050658;RNA transport;8.33042150926145e-12!GO:0030554;adenyl nucleotide binding;1.07442180810423e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.28058787961161e-11!GO:0006364;rRNA processing;1.49541730380511e-11!GO:0016072;rRNA metabolic process;1.96337009747886e-11!GO:0000785;chromatin;2.08323142552674e-11!GO:0004386;helicase activity;2.15271503657323e-11!GO:0006366;transcription from RNA polymerase II promoter;2.50503476264112e-11!GO:0006732;coenzyme metabolic process;3.5126081905748e-11!GO:0048193;Golgi vesicle transport;3.56605851465249e-11!GO:0019222;regulation of metabolic process;3.9971182583257e-11!GO:0005783;endoplasmic reticulum;6.45385935971572e-11!GO:0006913;nucleocytoplasmic transport;8.02548082994882e-11!GO:0042623;ATPase activity, coupled;8.38257595627801e-11!GO:0065004;protein-DNA complex assembly;9.91604907937829e-11!GO:0006461;protein complex assembly;1.00606708020289e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.15841400471265e-10!GO:0015630;microtubule cytoskeleton;1.30436484285048e-10!GO:0008565;protein transporter activity;1.42434427511739e-10!GO:0050789;regulation of biological process;1.47309242069877e-10!GO:0016607;nuclear speck;1.98244993379001e-10!GO:0065002;intracellular protein transport across a membrane;2.04238967298708e-10!GO:0016887;ATPase activity;2.10570757014354e-10!GO:0051169;nuclear transport;2.52499339020755e-10!GO:0030532;small nuclear ribonucleoprotein complex;4.04374206989045e-10!GO:0006333;chromatin assembly or disassembly;4.1817041211701e-10!GO:0006464;protein modification process;5.83207776973991e-10!GO:0008026;ATP-dependent helicase activity;6.05563304245871e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.09281365565026e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.11650101473459e-10!GO:0004812;aminoacyl-tRNA ligase activity;6.11650101473459e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.11650101473459e-10!GO:0051028;mRNA transport;6.17054186426965e-10!GO:0009055;electron carrier activity;7.65033845160408e-10!GO:0046930;pore complex;1.57613817603303e-09!GO:0043038;amino acid activation;1.73205462929615e-09!GO:0006418;tRNA aminoacylation for protein translation;1.73205462929615e-09!GO:0043039;tRNA aminoacylation;1.73205462929615e-09!GO:0000074;regulation of progression through cell cycle;1.82301301412806e-09!GO:0051726;regulation of cell cycle;1.91268014024102e-09!GO:0003712;transcription cofactor activity;2.10327703102372e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.90439616118488e-09!GO:0009259;ribonucleotide metabolic process;4.38381406710736e-09!GO:0043687;post-translational protein modification;4.74241074281291e-09!GO:0016192;vesicle-mediated transport;5.10442023892923e-09!GO:0009056;catabolic process;5.37393493551931e-09!GO:0006163;purine nucleotide metabolic process;5.49003402905484e-09!GO:0006164;purine nucleotide biosynthetic process;7.11097294219448e-09!GO:0016568;chromatin modification;7.17104929629439e-09!GO:0006261;DNA-dependent DNA replication;7.70936989173475e-09!GO:0009260;ribonucleotide biosynthetic process;1.21972699752756e-08!GO:0043566;structure-specific DNA binding;1.52640274471366e-08!GO:0016740;transferase activity;1.54656615292777e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.81854393339909e-08!GO:0003697;single-stranded DNA binding;2.07125323060628e-08!GO:0031323;regulation of cellular metabolic process;2.0868776737135e-08!GO:0006350;transcription;2.23208600521707e-08!GO:0005793;ER-Golgi intermediate compartment;2.33234480272673e-08!GO:0000775;chromosome, pericentric region;2.53411473665566e-08!GO:0017038;protein import;2.81811948375188e-08!GO:0031497;chromatin assembly;3.61511167253687e-08!GO:0015986;ATP synthesis coupled proton transport;3.82260913297912e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.82260913297912e-08!GO:0044432;endoplasmic reticulum part;4.20798891506359e-08!GO:0008639;small protein conjugating enzyme activity;4.52772759780985e-08!GO:0009150;purine ribonucleotide metabolic process;4.62818873844901e-08!GO:0009152;purine ribonucleotide biosynthetic process;6.23311249528797e-08!GO:0006334;nucleosome assembly;7.07905244533347e-08!GO:0016779;nucleotidyltransferase activity;8.38484315794708e-08!GO:0004842;ubiquitin-protein ligase activity;8.65371960158986e-08!GO:0009060;aerobic respiration;1.0138716630441e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.26999030810826e-07!GO:0019787;small conjugating protein ligase activity;1.35910003136955e-07!GO:0045333;cellular respiration;1.37949941744382e-07!GO:0000245;spliceosome assembly;1.55933719260363e-07!GO:0007005;mitochondrion organization and biogenesis;1.8678238629985e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.12029957329255e-07!GO:0019829;cation-transporting ATPase activity;2.40283152276587e-07!GO:0010468;regulation of gene expression;2.40283152276587e-07!GO:0005819;spindle;2.88698779694167e-07!GO:0051188;cofactor biosynthetic process;3.50798261093467e-07!GO:0031988;membrane-bound vesicle;3.69942588330046e-07!GO:0007010;cytoskeleton organization and biogenesis;3.75051731982746e-07!GO:0007051;spindle organization and biogenesis;4.22323172249963e-07!GO:0003899;DNA-directed RNA polymerase activity;4.39107926611497e-07!GO:0031982;vesicle;5.38203607954346e-07!GO:0012501;programmed cell death;5.44826143606159e-07!GO:0005667;transcription factor complex;5.46340340938034e-07!GO:0043623;cellular protein complex assembly;5.46348112567831e-07!GO:0016469;proton-transporting two-sector ATPase complex;5.81904686007359e-07!GO:0016023;cytoplasmic membrane-bound vesicle;5.81904686007359e-07!GO:0048523;negative regulation of cellular process;5.98139252691369e-07!GO:0032774;RNA biosynthetic process;7.39590027839615e-07!GO:0009142;nucleoside triphosphate biosynthetic process;8.39098502632197e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.39098502632197e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.61041581464258e-07!GO:0031410;cytoplasmic vesicle;9.13114151752936e-07!GO:0006915;apoptosis;9.17387840627102e-07!GO:0005657;replication fork;9.17387840627102e-07!GO:0051246;regulation of protein metabolic process;9.17387840627102e-07!GO:0006351;transcription, DNA-dependent;9.48722689812672e-07!GO:0006099;tricarboxylic acid cycle;1.13359034425744e-06!GO:0046356;acetyl-CoA catabolic process;1.13359034425744e-06!GO:0003924;GTPase activity;1.24639089942122e-06!GO:0006754;ATP biosynthetic process;1.3002702802988e-06!GO:0006753;nucleoside phosphate metabolic process;1.3002702802988e-06!GO:0009117;nucleotide metabolic process;1.32805719581325e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.35133112362737e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.36785321522517e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.40042410349421e-06!GO:0009141;nucleoside triphosphate metabolic process;1.42613975539467e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.63743951309896e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.63743951309896e-06!GO:0003724;RNA helicase activity;2.00656828358106e-06!GO:0048475;coated membrane;2.02140897902749e-06!GO:0030117;membrane coat;2.02140897902749e-06!GO:0009108;coenzyme biosynthetic process;2.04373634247573e-06!GO:0008094;DNA-dependent ATPase activity;2.04373634247573e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.08493266699315e-06!GO:0045259;proton-transporting ATP synthase complex;2.19323389616488e-06!GO:0006084;acetyl-CoA metabolic process;2.21117992229176e-06!GO:0032446;protein modification by small protein conjugation;2.2928398075306e-06!GO:0016881;acid-amino acid ligase activity;2.34282233342266e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.56095519248819e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.56095519248819e-06!GO:0046034;ATP metabolic process;3.19384066011502e-06!GO:0006752;group transfer coenzyme metabolic process;4.00370445383081e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.66890612046474e-06!GO:0007017;microtubule-based process;4.80420689881883e-06!GO:0031324;negative regulation of cellular metabolic process;5.04487922925126e-06!GO:0000314;organellar small ribosomal subunit;5.18206140060886e-06!GO:0005763;mitochondrial small ribosomal subunit;5.18206140060886e-06!GO:0016567;protein ubiquitination;5.28245031548147e-06!GO:0005762;mitochondrial large ribosomal subunit;5.76094404761545e-06!GO:0000315;organellar large ribosomal subunit;5.76094404761545e-06!GO:0008219;cell death;6.36887062152087e-06!GO:0016265;death;6.36887062152087e-06!GO:0016853;isomerase activity;7.09245764859613e-06!GO:0065007;biological regulation;7.76295835351473e-06!GO:0005768;endosome;8.38243325940382e-06!GO:0051329;interphase of mitotic cell cycle;8.81859901285323e-06!GO:0044431;Golgi apparatus part;9.5945599663346e-06!GO:0048519;negative regulation of biological process;1.04497018048544e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.05242377266648e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.21574317936545e-05!GO:0005525;GTP binding;1.2304020698952e-05!GO:0009109;coenzyme catabolic process;1.39362123937281e-05!GO:0030120;vesicle coat;1.62807714980858e-05!GO:0030662;coated vesicle membrane;1.62807714980858e-05!GO:0051325;interphase;1.65619203526258e-05!GO:0051170;nuclear import;1.66733460415922e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.66887304601185e-05!GO:0005813;centrosome;1.84845512394126e-05!GO:0051187;cofactor catabolic process;1.88220325399391e-05!GO:0009892;negative regulation of metabolic process;1.91296111264438e-05!GO:0005789;endoplasmic reticulum membrane;1.95492784408222e-05!GO:0005874;microtubule;2.00676992781004e-05!GO:0051168;nuclear export;2.16907519419388e-05!GO:0051427;hormone receptor binding;2.18891214294513e-05!GO:0006613;cotranslational protein targeting to membrane;2.28806810019882e-05!GO:0000075;cell cycle checkpoint;2.74640540110825e-05!GO:0003677;DNA binding;2.84356772720337e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;2.86237927415593e-05!GO:0042802;identical protein binding;3.02845242851082e-05!GO:0045449;regulation of transcription;3.08646565968415e-05!GO:0003682;chromatin binding;3.27748701851964e-05!GO:0006606;protein import into nucleus;4.33425413147458e-05!GO:0016859;cis-trans isomerase activity;4.42941168005634e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;4.85397574566646e-05!GO:0035257;nuclear hormone receptor binding;4.85397574566646e-05!GO:0031252;leading edge;4.86003556231987e-05!GO:0006793;phosphorus metabolic process;4.86003556231987e-05!GO:0006796;phosphate metabolic process;4.86003556231987e-05!GO:0043021;ribonucleoprotein binding;4.86613240515169e-05!GO:0008186;RNA-dependent ATPase activity;4.91294343562511e-05!GO:0016363;nuclear matrix;4.94131706736548e-05!GO:0005815;microtubule organizing center;4.94299162718197e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.07640050314368e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;5.22131918194277e-05!GO:0006520;amino acid metabolic process;5.22131918194277e-05!GO:0003690;double-stranded DNA binding;5.37618190122866e-05!GO:0006383;transcription from RNA polymerase III promoter;5.43043406738802e-05!GO:0004298;threonine endopeptidase activity;5.91359824280057e-05!GO:0003729;mRNA binding;6.27602335510873e-05!GO:0016741;transferase activity, transferring one-carbon groups;6.35211263756046e-05!GO:0016564;transcription repressor activity;6.67808474551559e-05!GO:0000776;kinetochore;9.24649759512268e-05!GO:0003713;transcription coactivator activity;0.000104746390064235!GO:0006355;regulation of transcription, DNA-dependent;0.000109867506739785!GO:0016563;transcription activator activity;0.000123599975701021!GO:0044452;nucleolar part;0.00012396890088472!GO:0008168;methyltransferase activity;0.000127276940680082!GO:0016481;negative regulation of transcription;0.000129035158626747!GO:0006302;double-strand break repair;0.000129972412423239!GO:0000139;Golgi membrane;0.000130033290149116!GO:0032561;guanyl ribonucleotide binding;0.000136119022048373!GO:0019001;guanyl nucleotide binding;0.000136119022048373!GO:0004004;ATP-dependent RNA helicase activity;0.00015672391461154!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000165606119827718!GO:0043069;negative regulation of programmed cell death;0.000166320526520771!GO:0006402;mRNA catabolic process;0.000166364059944774!GO:0007059;chromosome segregation;0.000175868472587518!GO:0007093;mitotic cell cycle checkpoint;0.000191471617028061!GO:0009165;nucleotide biosynthetic process;0.000197186504567485!GO:0043681;protein import into mitochondrion;0.000213694720176822!GO:0016310;phosphorylation;0.000214652320916018!GO:0043066;negative regulation of apoptosis;0.000234794836974299!GO:0006839;mitochondrial transport;0.00024368927075956!GO:0006401;RNA catabolic process;0.000244897950371452!GO:0030880;RNA polymerase complex;0.000249312844443713!GO:0006338;chromatin remodeling;0.000255440350263843!GO:0005788;endoplasmic reticulum lumen;0.000268380469165458!GO:0005770;late endosome;0.000269533898093325!GO:0006612;protein targeting to membrane;0.000279009635774065!GO:0005798;Golgi-associated vesicle;0.00028820799163267!GO:0051052;regulation of DNA metabolic process;0.000288262926318221!GO:0005769;early endosome;0.000308444768517706!GO:0000059;protein import into nucleus, docking;0.000343893158351457!GO:0051087;chaperone binding;0.000344735041979586!GO:0044440;endosomal part;0.000346586876754335!GO:0010008;endosome membrane;0.000346586876754335!GO:0015631;tubulin binding;0.000364421866936458!GO:0007006;mitochondrial membrane organization and biogenesis;0.000364421866936458!GO:0008033;tRNA processing;0.0003706019769466!GO:0045454;cell redox homeostasis;0.0003706019769466!GO:0005684;U2-dependent spliceosome;0.000373153559050107!GO:0000151;ubiquitin ligase complex;0.000373550266344505!GO:0015980;energy derivation by oxidation of organic compounds;0.000412753505296074!GO:0030867;rough endoplasmic reticulum membrane;0.00041445325785006!GO:0006519;amino acid and derivative metabolic process;0.000416558244219482!GO:0048471;perinuclear region of cytoplasm;0.000423553652497672!GO:0006414;translational elongation;0.000425137696272716!GO:0008654;phospholipid biosynthetic process;0.00043212841040299!GO:0003714;transcription corepressor activity;0.000514148346028734!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000529949533147479!GO:0051920;peroxiredoxin activity;0.000560495187628658!GO:0051252;regulation of RNA metabolic process;0.000582905605531665!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000582905605531665!GO:0007052;mitotic spindle organization and biogenesis;0.000602698776025591!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000630539778058461!GO:0000428;DNA-directed RNA polymerase complex;0.000630539778058461!GO:0008250;oligosaccharyl transferase complex;0.000634893841522856!GO:0009112;nucleobase metabolic process;0.000668270501270142!GO:0006730;one-carbon compound metabolic process;0.000679702674880413!GO:0003684;damaged DNA binding;0.000686654304905794!GO:0007088;regulation of mitosis;0.000704131686079424!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000812699145787716!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000831415819442392!GO:0045786;negative regulation of progression through cell cycle;0.000843726855264924!GO:0007264;small GTPase mediated signal transduction;0.000862540868409091!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000871363035065022!GO:0032508;DNA duplex unwinding;0.000881274490467409!GO:0032392;DNA geometric change;0.000881274490467409!GO:0006916;anti-apoptosis;0.000909598748731347!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000939244371736783!GO:0003678;DNA helicase activity;0.000975570484052488!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000975570484052488!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000975570484052488!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000975570484052488!GO:0048487;beta-tubulin binding;0.00102515302561654!GO:0042981;regulation of apoptosis;0.00115928026435258!GO:0043414;biopolymer methylation;0.0011673718589241!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00117274361322634!GO:0045892;negative regulation of transcription, DNA-dependent;0.00123012137756118!GO:0005048;signal sequence binding;0.00126165842593565!GO:0006144;purine base metabolic process;0.00128814958573956!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00129609184325934!GO:0043067;regulation of programmed cell death;0.00129657926864841!GO:0030036;actin cytoskeleton organization and biogenesis;0.00133584607416223!GO:0043488;regulation of mRNA stability;0.00134210107031195!GO:0043487;regulation of RNA stability;0.00134210107031195!GO:0000786;nucleosome;0.00138584591207096!GO:0016272;prefoldin complex;0.00142220214827757!GO:0006405;RNA export from nucleus;0.00148413489465577!GO:0006541;glutamine metabolic process;0.00148799612698634!GO:0006268;DNA unwinding during replication;0.00148976213990696!GO:0032259;methylation;0.00149392604870664!GO:0006352;transcription initiation;0.00155887279661232!GO:0033116;ER-Golgi intermediate compartment membrane;0.00155887279661232!GO:0040029;regulation of gene expression, epigenetic;0.00158715032345134!GO:0006626;protein targeting to mitochondrion;0.00158758192382589!GO:0044262;cellular carbohydrate metabolic process;0.0016672825434804!GO:0016126;sterol biosynthetic process;0.00173817143779766!GO:0005791;rough endoplasmic reticulum;0.00185858770304148!GO:0004576;oligosaccharyl transferase activity;0.00189908385694744!GO:0019843;rRNA binding;0.00202321199771984!GO:0046483;heterocycle metabolic process;0.00204795495616536!GO:0006310;DNA recombination;0.00210603746772781!GO:0004527;exonuclease activity;0.00225024587590071!GO:0000228;nuclear chromosome;0.0023199420204274!GO:0006284;base-excision repair;0.00238415444259046!GO:0008092;cytoskeletal protein binding;0.00264722276798149!GO:0016251;general RNA polymerase II transcription factor activity;0.00269442604974388!GO:0000159;protein phosphatase type 2A complex;0.0029070489566991!GO:0005758;mitochondrial intermembrane space;0.00291719077038176!GO:0000049;tRNA binding;0.00302747261441185!GO:0005885;Arp2/3 protein complex;0.00302747261441185!GO:0008652;amino acid biosynthetic process;0.00303762087480526!GO:0006595;polyamine metabolic process;0.00318493652922374!GO:0048500;signal recognition particle;0.00322205229704811!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00324080225019298!GO:0003711;transcription elongation regulator activity;0.00330144693344162!GO:0008601;protein phosphatase type 2A regulator activity;0.00342401926298443!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00346230704018765!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00346230704018765!GO:0009116;nucleoside metabolic process;0.00354375481693601!GO:0032200;telomere organization and biogenesis;0.00354497592562143!GO:0000723;telomere maintenance;0.00354497592562143!GO:0030118;clathrin coat;0.00357836033362619!GO:0006007;glucose catabolic process;0.00360974722763716!GO:0005741;mitochondrial outer membrane;0.00363548832607007!GO:0008022;protein C-terminus binding;0.00367916984199156!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00376504545567328!GO:0030029;actin filament-based process;0.00377282016965365!GO:0006611;protein export from nucleus;0.0040408076692948!GO:0008287;protein serine/threonine phosphatase complex;0.00429095179070645!GO:0005637;nuclear inner membrane;0.00441611390934005!GO:0005876;spindle microtubule;0.00447600035129572!GO:0006270;DNA replication initiation;0.00448210395581173!GO:0018196;peptidyl-asparagine modification;0.00453248272507434!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00453248272507434!GO:0043596;nuclear replication fork;0.00465850728017855!GO:0003746;translation elongation factor activity;0.00498069422843968!GO:0046474;glycerophospholipid biosynthetic process;0.0049896787805007!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00502358916734907!GO:0008312;7S RNA binding;0.00504733103031124!GO:0031970;organelle envelope lumen;0.00510409774993718!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0051265632943515!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0051265632943515!GO:0051287;NAD binding;0.00524307905019858!GO:0031124;mRNA 3'-end processing;0.00532446231156373!GO:0031968;organelle outer membrane;0.00543946426371943!GO:0030027;lamellipodium;0.00556441319611954!GO:0035258;steroid hormone receptor binding;0.00564827797012003!GO:0008139;nuclear localization sequence binding;0.00576454543271765!GO:0016584;nucleosome positioning;0.00579652652750011!GO:0006378;mRNA polyadenylation;0.00616610457229513!GO:0005669;transcription factor TFIID complex;0.00617873201665054!GO:0005905;coated pit;0.00618669593221491!GO:0000178;exosome (RNase complex);0.00618669593221491!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00622062602462927!GO:0045893;positive regulation of transcription, DNA-dependent;0.00622606883963297!GO:0000792;heterochromatin;0.0066296455928184!GO:0000922;spindle pole;0.00674757661470621!GO:0019752;carboxylic acid metabolic process;0.00676531121721498!GO:0000209;protein polyubiquitination;0.00684990290438352!GO:0006275;regulation of DNA replication;0.00695961392534834!GO:0016787;hydrolase activity;0.00722209493894883!GO:0009303;rRNA transcription;0.00725421917523212!GO:0019867;outer membrane;0.00726644549327144!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00737389783167872!GO:0045047;protein targeting to ER;0.00737389783167872!GO:0016491;oxidoreductase activity;0.00737435964391036!GO:0030521;androgen receptor signaling pathway;0.00740481707568157!GO:0006082;organic acid metabolic process;0.00754103035919309!GO:0006695;cholesterol biosynthetic process;0.00755049027588932!GO:0001726;ruffle;0.00756941614737786!GO:0008180;signalosome;0.00763316557022077!GO:0031072;heat shock protein binding;0.00783738710506957!GO:0043022;ribosome binding;0.00783738710506957!GO:0045045;secretory pathway;0.00783738710506957!GO:0030658;transport vesicle membrane;0.00793206640375814!GO:0030659;cytoplasmic vesicle membrane;0.0079700002146264!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00797599096579472!GO:0043284;biopolymer biosynthetic process;0.00833588388485117!GO:0051789;response to protein stimulus;0.00837462541316147!GO:0006986;response to unfolded protein;0.00837462541316147!GO:0012506;vesicle membrane;0.00848056738781374!GO:0030119;AP-type membrane coat adaptor complex;0.00855875977826858!GO:0005832;chaperonin-containing T-complex;0.00882160757974527!GO:0000339;RNA cap binding;0.0088316304066293!GO:0030663;COPI coated vesicle membrane;0.00896345085800562!GO:0030126;COPI vesicle coat;0.00896345085800562!GO:0042393;histone binding;0.00900461540528229!GO:0019899;enzyme binding;0.00924649978656817!GO:0030134;ER to Golgi transport vesicle;0.00927673501532297!GO:0007004;telomere maintenance via telomerase;0.00927673501532297!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00932679926894639!GO:0003702;RNA polymerase II transcription factor activity;0.00934031217700322!GO:0044454;nuclear chromosome part;0.00949623911959327!GO:0009308;amine metabolic process;0.00949623911959327!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00949623911959327!GO:0015002;heme-copper terminal oxidase activity;0.00949623911959327!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00949623911959327!GO:0004129;cytochrome-c oxidase activity;0.00949623911959327!GO:0031577;spindle checkpoint;0.00957269664017109!GO:0000725;recombinational repair;0.00994318209874133!GO:0000724;double-strand break repair via homologous recombination;0.00994318209874133!GO:0004518;nuclease activity;0.0101305273329105!GO:0006891;intra-Golgi vesicle-mediated transport;0.0101957882902276!GO:0044433;cytoplasmic vesicle part;0.0102704498739755!GO:0005996;monosaccharide metabolic process;0.0103843404756394!GO:0004532;exoribonuclease activity;0.0104107888845113!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0104107888845113!GO:0051539;4 iron, 4 sulfur cluster binding;0.0104616714060648!GO:0009451;RNA modification;0.0105539577597968!GO:0030133;transport vesicle;0.0111929290820436!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0116102026031146!GO:0030131;clathrin adaptor complex;0.012237948091985!GO:0007021;tubulin folding;0.0128043337281286!GO:0006289;nucleotide-excision repair;0.0128882752418026!GO:0042770;DNA damage response, signal transduction;0.0128992722566728!GO:0051101;regulation of DNA binding;0.0129381253726375!GO:0000910;cytokinesis;0.0129867984757885!GO:0009064;glutamine family amino acid metabolic process;0.0129867984757885!GO:0051540;metal cluster binding;0.0133360205564053!GO:0051536;iron-sulfur cluster binding;0.0133360205564053!GO:0000781;chromosome, telomeric region;0.0135708247931738!GO:0045941;positive regulation of transcription;0.013624405636379!GO:0044450;microtubule organizing center part;0.0137657698212532!GO:0030127;COPII vesicle coat;0.0143671059240651!GO:0012507;ER to Golgi transport vesicle membrane;0.0143671059240651!GO:0030660;Golgi-associated vesicle membrane;0.0143822987604476!GO:0019318;hexose metabolic process;0.0144260436356468!GO:0006376;mRNA splice site selection;0.0146974291011942!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0146974291011942!GO:0043601;nuclear replisome;0.0148045891594004!GO:0030894;replisome;0.0148045891594004!GO:0006807;nitrogen compound metabolic process;0.0148248979963039!GO:0000096;sulfur amino acid metabolic process;0.0151912619003822!GO:0006650;glycerophospholipid metabolic process;0.0152913945362458!GO:0008017;microtubule binding;0.0153676193091727!GO:0006790;sulfur metabolic process;0.0155267599494969!GO:0030496;midbody;0.0170443272122847!GO:0050662;coenzyme binding;0.0173441201449715!GO:0004003;ATP-dependent DNA helicase activity;0.017741895705424!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0179249193610157!GO:0016044;membrane organization and biogenesis;0.0179249193610157!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0182144839912002!GO:0006278;RNA-dependent DNA replication;0.0182349270212773!GO:0046467;membrane lipid biosynthetic process;0.0182621751212384!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0187749664321375!GO:0031570;DNA integrity checkpoint;0.0187986139494385!GO:0050178;phenylpyruvate tautomerase activity;0.0188812591082881!GO:0016835;carbon-oxygen lyase activity;0.0193239352796865!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0193239352796865!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0193981781252537!GO:0005862;muscle thin filament tropomyosin;0.0196221721112865!GO:0030176;integral to endoplasmic reticulum membrane;0.0200902445455823!GO:0048468;cell development;0.0203926649517453!GO:0065009;regulation of a molecular function;0.0204048946677444!GO:0030137;COPI-coated vesicle;0.0205345732160583!GO:0017166;vinculin binding;0.0205667360662119!GO:0009081;branched chain family amino acid metabolic process;0.0206835320145521!GO:0016585;chromatin remodeling complex;0.0207804525003701!GO:0043624;cellular protein complex disassembly;0.0208657382475492!GO:0006220;pyrimidine nucleotide metabolic process;0.021233595094674!GO:0008361;regulation of cell size;0.0215573905968095!GO:0015992;proton transport;0.0216827413672467!GO:0046365;monosaccharide catabolic process;0.0217393944970532!GO:0051098;regulation of binding;0.0217470370797295!GO:0005663;DNA replication factor C complex;0.0219760095423999!GO:0051656;establishment of organelle localization;0.0220467545396692!GO:0022890;inorganic cation transmembrane transporter activity;0.0224492927676417!GO:0000082;G1/S transition of mitotic cell cycle;0.0226351934893388!GO:0006096;glycolysis;0.0227850832345041!GO:0031123;RNA 3'-end processing;0.0232359635343853!GO:0001725;stress fiber;0.0236865432627641!GO:0032432;actin filament bundle;0.0236865432627641!GO:0032984;macromolecular complex disassembly;0.0237581825387216!GO:0005773;vacuole;0.0239816606367396!GO:0005853;eukaryotic translation elongation factor 1 complex;0.024053437032615!GO:0006818;hydrogen transport;0.0247855294958022!GO:0045947;negative regulation of translational initiation;0.0258033077713101!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0258033077713101!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0259254801508672!GO:0010257;NADH dehydrogenase complex assembly;0.0259254801508672!GO:0033108;mitochondrial respiratory chain complex assembly;0.0259254801508672!GO:0009119;ribonucleoside metabolic process;0.0261212720445694!GO:0006400;tRNA modification;0.026276631486739!GO:0000070;mitotic sister chromatid segregation;0.0266471844428579!GO:0006417;regulation of translation;0.0269883408995876!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0270803891116098!GO:0000819;sister chromatid segregation;0.0272152630054139!GO:0008276;protein methyltransferase activity;0.0277014780501795!GO:0005652;nuclear lamina;0.0278786887917117!GO:0006740;NADPH regeneration;0.0288119364225064!GO:0006098;pentose-phosphate shunt;0.0288119364225064!GO:0006091;generation of precursor metabolites and energy;0.0298568490336769!GO:0000726;non-recombinational repair;0.0300411474246119!GO:0008632;apoptotic program;0.0301085653820975!GO:0016049;cell growth;0.0303961881233625!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0310050088112579!GO:0001824;blastocyst development;0.0314187769018663!GO:0008320;protein transmembrane transporter activity;0.0316495349610392!GO:0008408;3'-5' exonuclease activity;0.0318887746831978!GO:0005938;cell cortex;0.0319291284980309!GO:0046489;phosphoinositide biosynthetic process;0.0320607089623317!GO:0005784;translocon complex;0.0327833136479963!GO:0019320;hexose catabolic process;0.0337085564905198!GO:0030518;steroid hormone receptor signaling pathway;0.0337085564905198!GO:0009124;nucleoside monophosphate biosynthetic process;0.0338215787982613!GO:0009123;nucleoside monophosphate metabolic process;0.0338215787982613!GO:0043631;RNA polyadenylation;0.0338215787982613!GO:0005869;dynactin complex;0.0342167303977045!GO:0016407;acetyltransferase activity;0.0347536014994632!GO:0046983;protein dimerization activity;0.0348661749866968!GO:0042769;DNA damage response, detection of DNA damage;0.0350928007264923!GO:0009113;purine base biosynthetic process;0.0352205186497508!GO:0016836;hydro-lyase activity;0.0353464146827647!GO:0022411;cellular component disassembly;0.0361924186862133!GO:0000097;sulfur amino acid biosynthetic process;0.0362147671194499!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0363144662053131!GO:0045039;protein import into mitochondrial inner membrane;0.0363144662053131!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0364273797379004!GO:0031371;ubiquitin conjugating enzyme complex;0.0366386721771129!GO:0000123;histone acetyltransferase complex;0.0366605601702376!GO:0005875;microtubule associated complex;0.0368404564256274!GO:0022884;macromolecule transmembrane transporter activity;0.0368404564256274!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0368404564256274!GO:0004722;protein serine/threonine phosphatase activity;0.0368949074798056!GO:0046966;thyroid hormone receptor binding;0.0371200641013817!GO:0008097;5S rRNA binding;0.03719610069043!GO:0007050;cell cycle arrest;0.03719610069043!GO:0019783;small conjugating protein-specific protease activity;0.0379497486725462!GO:0035267;NuA4 histone acetyltransferase complex;0.0380108862778526!GO:0046426;negative regulation of JAK-STAT cascade;0.0380108862778526!GO:0008538;proteasome activator activity;0.0382402889958833!GO:0043241;protein complex disassembly;0.0384183692737021!GO:0017134;fibroblast growth factor binding;0.0388947983852798!GO:0008629;induction of apoptosis by intracellular signals;0.0392715243995196!GO:0016197;endosome transport;0.0396731242995599!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0397325087778518!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0397392820482722!GO:0030145;manganese ion binding;0.0402239226053054!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0402239226053054!GO:0055083;monovalent inorganic anion homeostasis;0.0402239226053054!GO:0055064;chloride ion homeostasis;0.0402239226053054!GO:0030644;cellular chloride ion homeostasis;0.0402239226053054!GO:0046164;alcohol catabolic process;0.0402239226053054!GO:0000118;histone deacetylase complex;0.0403690002400675!GO:0001558;regulation of cell growth;0.040610152322097!GO:0006733;oxidoreduction coenzyme metabolic process;0.0416413375803849!GO:0004680;casein kinase activity;0.0416413375803849!GO:0000062;acyl-CoA binding;0.0416423287165429!GO:0046128;purine ribonucleoside metabolic process;0.0417115999839732!GO:0042278;purine nucleoside metabolic process;0.0417115999839732!GO:0031625;ubiquitin protein ligase binding;0.0420149739939977!GO:0043189;H4/H2A histone acetyltransferase complex;0.0424454846042243!GO:0051128;regulation of cellular component organization and biogenesis;0.0446006857286256!GO:0008213;protein amino acid alkylation;0.0447893593949912!GO:0006479;protein amino acid methylation;0.0447893593949912!GO:0006006;glucose metabolic process;0.0448615037252866!GO:0008143;poly(A) binding;0.0449889156434004!GO:0050749;apolipoprotein E receptor binding;0.045005109819416!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0454303693044514!GO:0006607;NLS-bearing substrate import into nucleus;0.0454614221841511!GO:0008154;actin polymerization and/or depolymerization;0.0457073602228099!GO:0000793;condensed chromosome;0.0460014153225177!GO:0005666;DNA-directed RNA polymerase III complex;0.0463494185643037!GO:0000086;G2/M transition of mitotic cell cycle;0.0476111839729682!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0477430101467297!GO:0042026;protein refolding;0.0493062398714757!GO:0043086;negative regulation of catalytic activity;0.0495524474578914
|sample_id=12627
|sample_id=12627
|sample_note=
|sample_note=
Line 74: Line 100:
|sample_strain=
|sample_strain=
|sample_tissue=unclassifiable
|sample_tissue=unclassifiable
|time= day00
|timecourse=Embryoid_body_to_melanocyte
|top_motifs=OCT4_SOX2{dimer}:2.71159397879;PATZ1:2.39988933635;T:2.12066871191;SP1:2.06724247944;GFI1:1.68874997617;SNAI1..3:1.56131167173;NFY{A,B,C}:1.55644360843;PBX1:1.48593665526;RBPJ:1.43943019902;SOX{8,9,10}:1.42775405161;E2F1..5:1.41676695197;XCPE1{core}:1.40767022087;NANOG:1.35976761428;PAX1,9:1.3477811251;TBP:1.31357940391;MAZ:1.30291355005;MZF1:1.28963388314;POU5F1:1.2583472212;FOXM1:1.20962065772;POU2F1..3:1.18504802;ZIC1..3:1.15145367475;RREB1:1.15053725763;EBF1:1.13698914806;MYOD1:1.13322839371;ZEB1:1.10831413762;VSX1,2:1.08500676794;SOX2:1.04856361771;ZNF143:1.04284247439;ZNF384:1.04046968846;RORA:0.999479807872;ONECUT1,2:0.992938577222;TFDP1:0.983098778356;HIF1A:0.928116226376;STAT1,3:0.927609434047;LEF1_TCF7_TCF7L1,2:0.90672615341;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.865527305102;NKX2-3_NKX2-5:0.845587603302;NRF1:0.80990523319;CUX2:0.804035698364;LMO2:0.800746079682;SOX17:0.792512088392;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.766193779888;EVI1:0.743786316711;HNF4A_NR2F1,2:0.728527281915;bHLH_family:0.72648939743;TOPORS:0.712090268301;YY1:0.659845819046;KLF4:0.645573621876;HOX{A4,D4}:0.607094271609;ATF4:0.599033227078;HOX{A6,A7,B6,B7}:0.59428853378;HNF1A:0.588198452907;IKZF2:0.58705911603;CRX:0.543870066214;ZBTB6:0.509798340565;AIRE:0.504968355821;CDC5L:0.492158962808;FOXD3:0.462479351448;GTF2I:0.433339007096;HAND1,2:0.42608743753;DBP:0.389762138852;BREu{core}:0.383025776357;PAX5:0.37804713258;UFEwm:0.377048286471;HOX{A5,B5}:0.370325669369;MTF1:0.36761549697;STAT5{A,B}:0.364216784206;ESRRA:0.350924993502;EN1,2:0.332055982934;ELK1,4_GABP{A,B1}:0.330848470314;HIC1:0.277059373602;MYB:0.272003601345;GATA6:0.230095503906;ZFP161:0.213415968161;REST:0.202629186776;TBX4,5:0.181921390281;RXR{A,B,G}:0.168052299803;TP53:0.164134107784;PRRX1,2:0.153704421781;TFAP2B:0.153549449701;ADNP_IRX_SIX_ZHX:0.14384042399;EGR1..3:0.140780943439;SREBF1,2:0.125661806828;POU3F1..4:0.1160541346;PRDM1:0.0843910086327;ESR1:0.0796133302883;NHLH1,2:0.0546038451503;GCM1,2:0.0499230202548;HMX1:0.0296527937639;GTF2A1,2:0.0188282177088;ALX1:-0.00120398185807;LHX3,4:-0.00637135312959;HSF1,2:-0.0159970374947;MTE{core}:-0.0192397457558;ZNF148:-0.0256951808751;NR1H4:-0.0270009673295;FOX{I1,J2}:-0.0281358022303;FOXN1:-0.0299763739653;NKX2-1,4:-0.0734134139379;RFX1:-0.0808076494413;IKZF1:-0.0831218683397;MYFfamily:-0.0865719334428;PAX2:-0.0995604744603;PPARG:-0.104334312122;ZNF423:-0.127304875408;JUN:-0.139042595329;MED-1{core}:-0.174410301907;FOXA2:-0.19100423918;ARID5B:-0.198904782778;POU6F1:-0.201425872472;GATA4:-0.203450618026;FOX{F1,F2,J1}:-0.219271824711;TEAD1:-0.234414549697;MYBL2:-0.245030978653;NANOG{mouse}:-0.250364619523;RXRA_VDR{dimer}:-0.252786519725;GFI1B:-0.254307821601;CDX1,2,4:-0.264789327986;PAX8:-0.294103923428;PITX1..3:-0.315432530281;XBP1:-0.315449561348;ATF2:-0.332204518009;ALX4:-0.334940323368;NKX3-2:-0.337384045252;NR5A1,2:-0.341528889897;SRF:-0.355069010515;CREB1:-0.355458707522;FOXL1:-0.356666764897;NFE2L2:-0.357022866792;NFKB1_REL_RELA:-0.382962001616;NKX6-1,2:-0.394315158284;TFCP2:-0.415560621524;SOX5:-0.421823170895;ATF5_CREB3:-0.454639913221;FOXP1:-0.464979824549;AHR_ARNT_ARNT2:-0.473303081289;TFAP4:-0.478651768251;MEF2{A,B,C,D}:-0.501128886997;TFAP2{A,C}:-0.519469537303;FOX{D1,D2}:-0.526514738927;NFE2:-0.53440677663;HES1:-0.539060620787;TEF:-0.544070269017;FOSL2:-0.557315213861;PAX3,7:-0.580454731392;SPI1:-0.587145814606;BACH2:-0.592739733808;FOXQ1:-0.593569850027;ZBTB16:-0.609368292624;FOS_FOS{B,L1}_JUN{B,D}:-0.609384729959;HMGA1,2:-0.614505090286;BPTF:-0.665761241545;NKX2-2,8:-0.666537057686;NFE2L1:-0.699321689113;AR:-0.700791534639;HLF:-0.729049515838;RUNX1..3:-0.732500982194;NFIX:-0.770685878451;FOXP3:-0.777763625822;SPIB:-0.785744457202;NR3C1:-0.791212274434;RFX2..5_RFXANK_RFXAP:-0.855820512281;NKX3-1:-0.868355364908;ATF6:-0.885560226141;DMAP1_NCOR{1,2}_SMARC:-0.900162037289;FOXO1,3,4:-0.91166968923;ELF1,2,4:-0.913163611234;NR6A1:-0.921250234341;ETS1,2:-0.96311963387;CEBPA,B_DDIT3:-0.964984781761;POU1F1:-0.981131768474;SPZ1:-1.01182505975;ZNF238:-1.03166923847;TLX2:-1.0353850762;IRF7:-1.07213939983;TLX1..3_NFIC{dimer}:-1.09684241987;PAX4:-1.12464132023;NFIL3:-1.14397994119;GLI1..3:-1.1509694216;SMAD1..7,9:-1.16460526812;TAL1_TCF{3,4,12}:-1.1764865461;TGIF1:-1.19831612678;HBP1_HMGB_SSRP1_UBTF:-1.22065876439;NFATC1..3:-1.2355185795;IRF1,2:-1.26354983107;GZF1:-1.27786539515;EP300:-1.30736385674;MAFB:-1.33862241366;HOXA9_MEIS1:-1.3416254123;PAX6:-1.37805571035;STAT2,4,6:-1.49697227591;PDX1:-1.6188711568
|top_motifs=OCT4_SOX2{dimer}:2.71159397879;PATZ1:2.39988933635;T:2.12066871191;SP1:2.06724247944;GFI1:1.68874997617;SNAI1..3:1.56131167173;NFY{A,B,C}:1.55644360843;PBX1:1.48593665526;RBPJ:1.43943019902;SOX{8,9,10}:1.42775405161;E2F1..5:1.41676695197;XCPE1{core}:1.40767022087;NANOG:1.35976761428;PAX1,9:1.3477811251;TBP:1.31357940391;MAZ:1.30291355005;MZF1:1.28963388314;POU5F1:1.2583472212;FOXM1:1.20962065772;POU2F1..3:1.18504802;ZIC1..3:1.15145367475;RREB1:1.15053725763;EBF1:1.13698914806;MYOD1:1.13322839371;ZEB1:1.10831413762;VSX1,2:1.08500676794;SOX2:1.04856361771;ZNF143:1.04284247439;ZNF384:1.04046968846;RORA:0.999479807872;ONECUT1,2:0.992938577222;TFDP1:0.983098778356;HIF1A:0.928116226376;STAT1,3:0.927609434047;LEF1_TCF7_TCF7L1,2:0.90672615341;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.865527305102;NKX2-3_NKX2-5:0.845587603302;NRF1:0.80990523319;CUX2:0.804035698364;LMO2:0.800746079682;SOX17:0.792512088392;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.766193779888;EVI1:0.743786316711;HNF4A_NR2F1,2:0.728527281915;bHLH_family:0.72648939743;TOPORS:0.712090268301;YY1:0.659845819046;KLF4:0.645573621876;HOX{A4,D4}:0.607094271609;ATF4:0.599033227078;HOX{A6,A7,B6,B7}:0.59428853378;HNF1A:0.588198452907;IKZF2:0.58705911603;CRX:0.543870066214;ZBTB6:0.509798340565;AIRE:0.504968355821;CDC5L:0.492158962808;FOXD3:0.462479351448;GTF2I:0.433339007096;HAND1,2:0.42608743753;DBP:0.389762138852;BREu{core}:0.383025776357;PAX5:0.37804713258;UFEwm:0.377048286471;HOX{A5,B5}:0.370325669369;MTF1:0.36761549697;STAT5{A,B}:0.364216784206;ESRRA:0.350924993502;EN1,2:0.332055982934;ELK1,4_GABP{A,B1}:0.330848470314;HIC1:0.277059373602;MYB:0.272003601345;GATA6:0.230095503906;ZFP161:0.213415968161;REST:0.202629186776;TBX4,5:0.181921390281;RXR{A,B,G}:0.168052299803;TP53:0.164134107784;PRRX1,2:0.153704421781;TFAP2B:0.153549449701;ADNP_IRX_SIX_ZHX:0.14384042399;EGR1..3:0.140780943439;SREBF1,2:0.125661806828;POU3F1..4:0.1160541346;PRDM1:0.0843910086327;ESR1:0.0796133302883;NHLH1,2:0.0546038451503;GCM1,2:0.0499230202548;HMX1:0.0296527937639;GTF2A1,2:0.0188282177088;ALX1:-0.00120398185807;LHX3,4:-0.00637135312959;HSF1,2:-0.0159970374947;MTE{core}:-0.0192397457558;ZNF148:-0.0256951808751;NR1H4:-0.0270009673295;FOX{I1,J2}:-0.0281358022303;FOXN1:-0.0299763739653;NKX2-1,4:-0.0734134139379;RFX1:-0.0808076494413;IKZF1:-0.0831218683397;MYFfamily:-0.0865719334428;PAX2:-0.0995604744603;PPARG:-0.104334312122;ZNF423:-0.127304875408;JUN:-0.139042595329;MED-1{core}:-0.174410301907;FOXA2:-0.19100423918;ARID5B:-0.198904782778;POU6F1:-0.201425872472;GATA4:-0.203450618026;FOX{F1,F2,J1}:-0.219271824711;TEAD1:-0.234414549697;MYBL2:-0.245030978653;NANOG{mouse}:-0.250364619523;RXRA_VDR{dimer}:-0.252786519725;GFI1B:-0.254307821601;CDX1,2,4:-0.264789327986;PAX8:-0.294103923428;PITX1..3:-0.315432530281;XBP1:-0.315449561348;ATF2:-0.332204518009;ALX4:-0.334940323368;NKX3-2:-0.337384045252;NR5A1,2:-0.341528889897;SRF:-0.355069010515;CREB1:-0.355458707522;FOXL1:-0.356666764897;NFE2L2:-0.357022866792;NFKB1_REL_RELA:-0.382962001616;NKX6-1,2:-0.394315158284;TFCP2:-0.415560621524;SOX5:-0.421823170895;ATF5_CREB3:-0.454639913221;FOXP1:-0.464979824549;AHR_ARNT_ARNT2:-0.473303081289;TFAP4:-0.478651768251;MEF2{A,B,C,D}:-0.501128886997;TFAP2{A,C}:-0.519469537303;FOX{D1,D2}:-0.526514738927;NFE2:-0.53440677663;HES1:-0.539060620787;TEF:-0.544070269017;FOSL2:-0.557315213861;PAX3,7:-0.580454731392;SPI1:-0.587145814606;BACH2:-0.592739733808;FOXQ1:-0.593569850027;ZBTB16:-0.609368292624;FOS_FOS{B,L1}_JUN{B,D}:-0.609384729959;HMGA1,2:-0.614505090286;BPTF:-0.665761241545;NKX2-2,8:-0.666537057686;NFE2L1:-0.699321689113;AR:-0.700791534639;HLF:-0.729049515838;RUNX1..3:-0.732500982194;NFIX:-0.770685878451;FOXP3:-0.777763625822;SPIB:-0.785744457202;NR3C1:-0.791212274434;RFX2..5_RFXANK_RFXAP:-0.855820512281;NKX3-1:-0.868355364908;ATF6:-0.885560226141;DMAP1_NCOR{1,2}_SMARC:-0.900162037289;FOXO1,3,4:-0.91166968923;ELF1,2,4:-0.913163611234;NR6A1:-0.921250234341;ETS1,2:-0.96311963387;CEBPA,B_DDIT3:-0.964984781761;POU1F1:-0.981131768474;SPZ1:-1.01182505975;ZNF238:-1.03166923847;TLX2:-1.0353850762;IRF7:-1.07213939983;TLX1..3_NFIC{dimer}:-1.09684241987;PAX4:-1.12464132023;NFIL3:-1.14397994119;GLI1..3:-1.1509694216;SMAD1..7,9:-1.16460526812;TAL1_TCF{3,4,12}:-1.1764865461;TGIF1:-1.19831612678;HBP1_HMGB_SSRP1_UBTF:-1.22065876439;NFATC1..3:-1.2355185795;IRF1,2:-1.26354983107;GZF1:-1.27786539515;EP300:-1.30736385674;MAFB:-1.33862241366;HOXA9_MEIS1:-1.3416254123;PAX6:-1.37805571035;STAT2,4,6:-1.49697227591;PDX1:-1.6188711568
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12627-134E8;search_select_hide=table117:FF:12627-134E8
}}
}}

Latest revision as of 18:41, 4 June 2020

Name:H9 Embryoid body cells, melanocytic induction
Species:Human (Homo sapiens)
Library ID:CNhs12822
Sample type:time courses
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueunclassifiable
dev stageNA
sexfemale
ageNA
cell typestem cell
cell lineH9
companyNA
collaborationSusan Zabierowski (Wistar Institute)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004802
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12822 CAGE DRX008583 DRR009455
Accession ID Hg19

Library idBAMCTSS
CNhs12822 DRZ000880 DRZ002265
Accession ID Hg38

Library idBAMCTSS
CNhs12822 DRZ012230 DRZ013615
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0455
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.556
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0.13
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0.258
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0.0477
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.258
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0222
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.175
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0.0477
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0907
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.223
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.0477
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.156
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.0477
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.166
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0.0907
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.396
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.011
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0477
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0.0477
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.0477
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.551
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.086
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature-0.00229
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0477
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0.761
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.124
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12822

Jaspar motifP-value
MA0002.21.00867e-5
MA0003.10.236
MA0004.10.686
MA0006.10.69
MA0007.10.623
MA0009.10.609
MA0014.10.612
MA0017.10.68
MA0018.20.428
MA0019.10.268
MA0024.16.15371e-5
MA0025.10.387
MA0027.10.586
MA0028.10.274
MA0029.10.496
MA0030.10.896
MA0031.10.583
MA0035.20.243
MA0038.15.36949e-4
MA0039.20.0406
MA0040.10.872
MA0041.10.937
MA0042.10.922
MA0043.10.825
MA0046.10.0222
MA0047.20.27
MA0048.10.889
MA0050.19.16806e-10
MA0051.14.83347e-5
MA0052.10.219
MA0055.10.259
MA0057.10.515
MA0058.10.706
MA0059.10.797
MA0060.11.23031e-13
MA0061.10.00667
MA0062.20.722
MA0065.20.826
MA0066.10.516
MA0067.10.148
MA0068.10.00927
MA0069.10.422
MA0070.10.012
MA0071.10.973
MA0072.10.998
MA0073.10.859
MA0074.10.934
MA0076.10.27
MA0077.10.186
MA0078.10.892
MA0079.20.136
MA0080.28.2981e-12
MA0081.10.0383
MA0083.10.308
MA0084.10.645
MA0087.10.637
MA0088.10.297
MA0090.10.465
MA0091.10.0269
MA0092.10.0573
MA0093.10.57
MA0099.22.50533e-10
MA0100.10.869
MA0101.10.0468
MA0102.20.00202
MA0103.10.18
MA0104.20.853
MA0105.12.67153e-4
MA0106.10.295
MA0107.10.0322
MA0108.21.26293e-13
MA0111.10.625
MA0112.28.11795e-5
MA0113.10.112
MA0114.10.979
MA0115.10.389
MA0116.10.00422
MA0117.10.682
MA0119.13.44338e-4
MA0122.10.864
MA0124.10.975
MA0125.10.00276
MA0131.10.938
MA0135.10.0804
MA0136.11.48814e-10
MA0137.20.502
MA0138.20.869
MA0139.10.875
MA0140.10.851
MA0141.10.463
MA0142.13.4138e-11
MA0143.11.91218e-4
MA0144.10.0646
MA0145.10.147
MA0146.10.461
MA0147.10.764
MA0148.10.0785
MA0149.10.0223
MA0150.11.7857e-4
MA0152.10.572
MA0153.10.0409
MA0154.10.0293
MA0155.10.477
MA0156.11.58592e-4
MA0157.10.207
MA0159.10.101
MA0160.10.246
MA0162.10.89
MA0163.12.53618e-5
MA0164.10.707
MA0258.10.0582
MA0259.10.452



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12822

Novel motifP-value
10.0626
100.0107
1000.905
1010.271
1020.834
1030.192
1040.718
1050.167
1060.033
1070.362
1080.667
1090.216
110.096
1100.265
1110.0103
1120.328
1130.502
1140.00844
1150.258
1160.858
1170.101
1180.701
1190.171
120.972
1200.409
1210.966
1220.885
1230.0108
1240.15
1250.563
1260.68
1270.555
1280.494
1290.464
130.595
1300.147
1310.748
1320.952
1330.143
1340.501
1350.0508
1360.206
1370.248
1380.21
1390.0103
140.573
1400.0251
1410.692
1420.965
1430.00507
1440.746
1450.314
1460.42
1470.775
1480.00294
1490.0547
150.0459
1500.498
1510.0629
1520.612
1530.382
1540.126
1550.992
1560.595
1570.534
1580.444
1590.822
160.388
1600.424
1610.556
1620.425
1630.418
1640.171
1650.166
1660.773
1670.0116
1680.364
1690.00167
170.28
180.249
190.237
20.73
200.875
210.507
220.275
230.0518
240.716
250.376
260.119
270.622
280.671
290.662
30.0562
300.584
310.973
320.131
330.709
340.912
350.297
360.0423
370.218
380.321
390.578
40.837
400.739
410.127
420.208
430.113
440.838
450.798
460.0511
470.479
480.426
490.072
50.0872
500.908
510.748
520.553
530.168
540.473
550.0121
560.602
570.273
580.0932
590.466
60.646
600.125
610.823
620.0314
630.1
640.256
650.138
660.623
670.224
680.413
690.703
70.376
700.00717
710.0329
720.493
730.124
740.154
750.207
760.322
770.352
780.506
790.343
80.0984
800.363
810.245
820.0695
830.352
840.851
850.0688
860.304
870.545
880.933
890.159
90.296
900.103
910.165
920.0432
930.267
940.0517
950.785
960.0172
970.641
980.207
990.481



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12822


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000147 (pigment cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000034 (stem cell)
0000148 (melanocyte)
0002322 (embryonic stem cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101581 (embryonic stem cell line sample)
0000350 (experimentally modified sample)
0000334 (melanocytic induction sample)
0000380 (0 days sample)
0000400 (H9 embryonic stem cell line sample)
0100669 (embryonic cell line sample)
0000532 (human H9 Embryoid body cells 0 days after melanocytic induction sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)

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