FF:1263-45I1: Difference between revisions

Latest revision as of 18:41, 4 June 2020

Name:	adrenal gland, embryo E17
Species:	Mouse (Mus musculus)
Library ID:	CNhs11043
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	adrenal gland
dev stage	17 days embryo
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004758

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11043		CAGE		DRX008930		DRR009804

Accession ID Mm9

Library id		BAM		CTSS
CNhs11043		DRZ001229		DRZ002612

Accession ID Mm10

Library id		BAM		CTSS
CNhs11043		DRZ012579		DRZ013962

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11043

0	0
1	0
10	0
100	0
1000	0.0901
1001	0
1002	0.261
1003	-0.0704
1004	0
1005	-0.0221
1006	0.0465
1007	-0.0952
1008	0
1009	0.107
101	-0.0277
1010	0
1011	-0.0694
1012	0
1013	-0.00155
1014	0.239
1015	0.0435
1016	0.0833
1017	0
1018	0
1019	0
102	0
1020	0
1021	0
1022	0.0123
1023	0
1024	0.0259
1025	0.0676
1026	0
1027	-0.0174
1028	0
1029	-0.0181
103	0.284
1030	0
1031	0.218
1032	-0.0526
1033	0.0901
1034	0.00392
1035	0
1036	0.0455
1037	0
1038	-0.0699
1039	0.127
104	0
1040	-0.0215
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11043

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.461
MA0003.1	MA0003.1	0.176
MA0004.1	MA0004.1	0.00297
MA0006.1	MA0006.1	0.317
MA0007.1	MA0007.1	0.854
MA0009.1	MA0009.1	0.0202
MA0014.1	MA0014.1	0.598
MA0017.1	MA0017.1	0.906
MA0018.2	MA0018.2	0.332
MA0019.1	MA0019.1	0.679
MA0024.1	MA0024.1	0.0949
MA0025.1	MA0025.1	0.797
MA0027.1	MA0027.1	0.0261
MA0028.1	MA0028.1	0.151
MA0029.1	MA0029.1	1.40336e-4
MA0030.1	MA0030.1	0.936
MA0031.1	MA0031.1	0.815
MA0035.2	MA0035.2	0.0202
MA0038.1	MA0038.1	0.316
MA0039.2	MA0039.2	0.203
MA0040.1	MA0040.1	0.103
MA0041.1	MA0041.1	0.184
MA0042.1	MA0042.1	0.357
MA0043.1	MA0043.1	0.15
MA0046.1	MA0046.1	0.00274
MA0047.2	MA0047.2	0.53
MA0048.1	MA0048.1	0.0378
MA0050.1	MA0050.1	0.00137
MA0051.1	MA0051.1	1.13337e-5
MA0052.1	MA0052.1	0.523
MA0055.1	MA0055.1	0.348
MA0057.1	MA0057.1	1
MA0058.1	MA0058.1	0.121
MA0059.1	MA0059.1	0.368
MA0060.1	MA0060.1	0.284
MA0061.1	MA0061.1	0.876
MA0062.2	MA0062.2	0.0032
MA0065.2	MA0065.2	0.0394
MA0066.1	MA0066.1	0.968
MA0067.1	MA0067.1	0.185
MA0068.1	MA0068.1	0.238
MA0069.1	MA0069.1	0.0817
MA0070.1	MA0070.1	0.00166
MA0071.1	MA0071.1	0.0575
MA0072.1	MA0072.1	0.107
MA0073.1	MA0073.1	0.767
MA0074.1	MA0074.1	0.894
MA0076.1	MA0076.1	0.138
MA0077.1	MA0077.1	0.537
MA0078.1	MA0078.1	0.933
MA0079.2	MA0079.2	0.396
MA0080.2	MA0080.2	2.09595e-5
MA0081.1	MA0081.1	0.182
MA0083.1	MA0083.1	0.0348
MA0084.1	MA0084.1	0.0474
MA0087.1	MA0087.1	0.0175
MA0088.1	MA0088.1	0.397
MA0090.1	MA0090.1	0.449
MA0091.1	MA0091.1	0.22
MA0092.1	MA0092.1	0.84
MA0093.1	MA0093.1	0.0382
MA0099.2	MA0099.2	0.067
MA0100.1	MA0100.1	0.0467
MA0101.1	MA0101.1	0.144
MA0102.2	MA0102.2	0.163
MA0103.1	MA0103.1	2.55865e-7
MA0104.2	MA0104.2	0.157
MA0105.1	MA0105.1	0.407
MA0106.1	MA0106.1	0.926
MA0107.1	MA0107.1	0.029
MA0108.2	MA0108.2	0.00484
MA0111.1	MA0111.1	0.733
MA0112.2	MA0112.2	0.0428
MA0113.1	MA0113.1	0.963
MA0114.1	MA0114.1	0.165
MA0115.1	MA0115.1	0.717
MA0116.1	MA0116.1	0.202
MA0117.1	MA0117.1	0.721
MA0119.1	MA0119.1	0.00809
MA0122.1	MA0122.1	0.512
MA0124.1	MA0124.1	0.906
MA0125.1	MA0125.1	0.154
MA0131.1	MA0131.1	0.32
MA0135.1	MA0135.1	0.596
MA0136.1	MA0136.1	4.33673e-5
MA0137.2	MA0137.2	0.29
MA0138.2	MA0138.2	0.221
MA0139.1	MA0139.1	0.681
MA0140.1	MA0140.1	2.29917e-5
MA0141.1	MA0141.1	1.97647e-4
MA0142.1	MA0142.1	0.37
MA0143.1	MA0143.1	0.1
MA0144.1	MA0144.1	0.565
MA0145.1	MA0145.1	0.214
MA0146.1	MA0146.1	0.508
MA0147.1	MA0147.1	0.149
MA0148.1	MA0148.1	0.854
MA0149.1	MA0149.1	0.575
MA0150.1	MA0150.1	0.0839
MA0152.1	MA0152.1	0.928
MA0153.1	MA0153.1	0.0737
MA0154.1	MA0154.1	0.0342
MA0155.1	MA0155.1	0.319
MA0156.1	MA0156.1	2.82498e-4
MA0157.1	MA0157.1	0.328
MA0159.1	MA0159.1	0.908
MA0160.1	MA0160.1	0.0722
MA0162.1	MA0162.1	0.296
MA0163.1	MA0163.1	0.0332
MA0164.1	MA0164.1	0.551
MA0258.1	MA0258.1	0.263
MA0259.1	MA0259.1	0.132

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11043

Novel motif	Logo	P-value
1	1	0.136
10	10	0.688
100	100	0.882
101	101	0.884
102	102	0.914
103	103	0.855
104	104	0.918
105	105	0.665
106	106	0.565
107	107	0.361
108	108	0.176
109	109	0.245
11	11	0.313
110	110	0.0748
111	111	0.0923
112	112	0.713
113	113	0.801
114	114	0.236
115	115	0.493
116	116	0.523
117	117	0.285
118	118	0.849
119	119	0.535
12	12	0.351
120	120	0.143
121	121	0.908
122	122	0.413
123	123	0.202
124	124	0.31
125	125	0.00928
126	126	0.136
127	127	0.947
128	128	0.109
129	129	0.727
13	13	0.409
130	130	0.999
131	131	0.357
132	132	0.754
133	133	0.298
134	134	0.266
135	135	0.231
136	136	0.171
137	137	0.653
138	138	0.112
139	139	0.9
14	14	0.728
140	140	0.664
141	141	0.916
142	142	0.38
143	143	0.551
144	144	0.305
145	145	0.791
146	146	0.159
147	147	0.87
148	148	0.406
149	149	0.108
15	15	0.359
150	150	0.379
151	151	0.923
152	152	0.185
153	153	0.663
154	154	0.126
155	155	0.616
156	156	9.22466e-6
157	157	0.0903
158	158	0.0528
159	159	0.0151
160	160	0.201
161	161	0.844
162	162	0.785
163	163	0.46
164	164	0.555
165	165	0.344
166	166	0.148
167	167	0.0902
168	168	0.526
169	169	0.0729
17	17	0.483
18	18	0.289
19	19	0.0197
2	2	0.134
20	20	0.157
21	21	0.818
22	22	0.0598
23	23	0.783
24	24	0.753
25	25	0.374
26	26	0.98
27	27	0.587
28	28	0.246
29	29	0.728
3	3	0.602
30	30	0.372
31	31	0.904
32	32	0.73
33	33	0.711
34	34	0.287
35	35	0.0806
36	36	0.723
37	37	0.437
38	38	0.9
39	39	0.706
4	4	0.951
40	40	0.274
41	41	0.00636
42	42	0.925
43	43	0.315
44	44	0.895
45	45	0.893
46	46	0.669
47	47	0.469
48	48	0.489
49	49	0.67
5	5	0.662
50	50	0.145
51	51	0.773
52	52	0.731
53	53	0.0651
54	54	0.752
55	55	0.0403
56	56	0.751
57	57	0.872
58	58	0.516
59	59	0.0602
6	6	0.914
60	60	0.225
61	61	0.398
62	62	0.701
63	63	0.495
64	64	0.338
65	65	0.992
66	66	0.745
67	67	0.853
68	68	0.428
69	69	0.0793
7	7	0.443
70	70	0.057
71	71	0.872
72	72	0.989
73	73	0.34
74	74	0.323
75	75	0.442
76	76	0.343
77	77	0.0518
78	78	0.173
79	79	0.924
8	8	0.545
80	80	0.326
81	81	0.96
82	82	0.203
83	83	0.123
84	84	0.431
85	85	0.683
86	86	0.707
87	87	0.201
88	88	0.496
89	89	0.311
9	9	0.926
90	90	0.743
91	91	0.339
92	92	0.421
93	93	0.328
94	94	0.766
95	95	0.244
96	96	0.581
97	97	0.683
98	98	0.708
99	99	0.168

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11043

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000300 mouse embryonic day 17 sample
FF:0011520 adrenal gland - embryo E17 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002369 (adrenal gland)
0002100 (trunk)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0005172 (abdomen element)
0002530 (gland)
0006858 (adrenal/interrenal gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000300 (mouse embryonic day 17 sample)
0011520 (adrenal gland - embryo E17 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000926,UBERON:0000949,UBERON:0001062,UBERON:0002050,UBERON:0002100,UBERON:0002342,UBERON:0002346,UBERON:0002368,UBERON:0002369,UBERON:0002417,UBERON:0002530,UBERON:0002532,UBERON:0003075,UBERON:0004120,UBERON:0004121,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005423,UBERON:0006598,UBERON:0007284
+|DRA_sample_Accession=CAGE@SAMD00004758
+|accession_numbers=CAGE;DRX008930;DRR009804;DRZ001229;DRZ002612;DRZ012579;DRZ013962
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002369,UBERON:0002100,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0005172,UBERON:0002530,UBERON:0006858,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0000916
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000999,FF:0000292,FF:0000004,FF:0000300,FF:0011520
 |comment=fantom:1263-45I1
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr2:38570011..38570034,-!p1@Nr5a1!2.28!190.03!Nr5a1;;chr8:59799772..59799789,+!p1@Hand2!1.76!157.05!Hand2;;chr7:108966820..108966835,+!p1@Phox2a!1.66!45.20!Phox2a;;chr11:57645506..57645523,-!p1@Hand1!1.47!28.83!Hand1;;chr6:83020355..83020371,-!p1@Tlx2!1.39!23.29!Tlx2;;chr4:133109285..133109308,+!p1@Nr0b2!1.30!19.14!Nr0b2;;chr2:38567715..38567730,-!p2@Nr5a1!1.27!17.53!Nr5a1;;chr11:96143666..96143725,+!p1@Hoxb8!1.24!18.91!Hoxb8;;chrX:83437105..83437121,+!p1@Nr0b1!1.22!15.68!Nr0b1;;chr15:102828658..102828678,+!p1@Hoxc6!1.21!15.22!Hoxc6;;chr10:22539932..22539956,-!p1@Tcf21!1.17!36.44!Tcf21;;chr5:120120667..120120685,+!p3@Tbx3!1.13!23.75!Tbx3;;chr8:87425854..87425891,+!p1@Klf1!1.13!12.45!Klf1;;chr11:96153767..96153822,+!p1@Hoxb6!1.12!18.68!Hoxb6;;chr15:101097270..101097290,+!p1@Nr4a1!1.11!122.92!Nr4a1;;chr11:96147952..96147967,+!p1@Hoxb7!1.11!14.99!Hoxb7;;chr18:3281750..3281776,-!p2@Crem!1.07!22.14!Crem;;chr10:88996336..88996380,-!p2@Nr1h4!1.07!13.38!Nr1h4;;chr15:103085660..103085681,-!p1@Nfe2!1.03!14.53!Nfe2;;chr11:5761979..5761992,+!p2@Aebp1!1.00!18.45!Aebp1;;chr7:17647736..17647772,-!p1@Hif3a!0.99!31.59!Hif3a;;chr9:24578720..24578735,-!p1@Tbx20!0.99!8.76!Tbx20;;chr11:5761889..5761969,+!p1@Aebp1!0.98!368.75!Aebp1;;chr10:88996295..88996335,-!p3@Nr1h4!0.98!10.38!Nr1h4;;chr2:9800207..9800234,-!p1@Gata3!0.97!25.83!Gata3;;chr13:99124189..99124205,+!p1@Foxd1!0.96!12.68!Foxd1;;chr5:67490284..67490302,-!p1@Phox2b!0.95!7.84!Phox2b;;chr5:67490474..67490494,-!p2@Phox2b!0.94!7.61!Phox2b;;chr4:43575544..43575565,+!p2@Creb3!0.93!45.66!Creb3;;chr13:117099847..117099907,-!p1@Isl1!0.92!13.84!Isl1;;chr6:88143711..88143717,+!p2@Gata2!0.91!11.76!Gata2;;chr11:96145450..96145517,+!p2@Hoxb7!0.91!10.84!Hoxb7;;chr12:56700411..56700416,+!p@chr12:56700411..56700416,+!0.91!7.15!Insm2;;chr10:80809447..80809515,-!p5@Hmg20b!0.90!8.53!Hmg20b;;chr10:12810631..12810649,+!p1@Plagl1!0.89!187.26!Plagl1;;chr15:102839948..102839975,+!p3@Hoxc6!0.87!6.46!Hoxc6;;chr18:11052485..11052508,+!p2@Gata6!0.85!17.99!Gata6;;chr7:116154364..116154444,+!p1@Tub!0.85!10.84!Tub;;chr5:120120834..120120845,+!p8@Tbx3!0.84!6.00!Tbx3;;chr11:96132637..96132652,+!p1@Hoxb9!0.84!6.00!Hoxb9;;chr5:125538737..125538781,-!p2@Ncor2!0.83!21.91!Ncor2;;chr3:54559463..54559493,+!p3@Smad9!0.83!11.07!Smad9;;chr7:19608891..19608895,-!p1@Foxa3!0.82!7.38!Foxa3;;chr11:96143962..96144035,+!p2@Hoxb8!0.82!5.53!Hoxb8;;chr18:3281725..3281740,-!p3@Crem!0.81!7.15!Crem;;chr2:115890953..115890974,-!p6@Meis2!0.80!8.30!Meis2;;chr7:6649134..6649167,-!p1@Zim1!0.79!30.21!Zim1;;chr18:11052456..11052477,+!p3@Gata6!0.75!15.45!Gata6;;chr5:67490391..67490404,-!p3@Phox2b!0.75!4.61!Phox2b;;chr6:88148650..88148669,+!p1@Gata2!0.74!41.97!Gata2;;chr5:120130377..120130432,+!p10@Tbx3!0.73!4.38!Tbx3;;chr11:96160426..96160443,+!p2@Hoxb6!0.73!4.38!Hoxb6;;chr4:48058129..48058179,+!p2@Nr4a3!0.72!8.53!Nr4a3;;chr5:92391466..92391471,+!p2@Thap6!0.72!6.46!Thap6;;chr2:28477452..28477483,-!p1@Gfi1b!0.71!5.30!Gfi1b;;chr1:19202352..19202354,+!p2@Tfap2b!0.71!4.15!Tfap2b;;chrX:7544943..7545001,-!p1@Gata1!0.71!4.15!Gata1;;chr9:96159147..96159204,+!p2@Tfdp2!0.70!8.07!Tfdp2;;chr15:102865088..102865107,+!p1@Hoxc4!0.70!5.53!Hoxc4;;chr1:19199236..19199258,+!p1@Tfap2b!0.69!3.92!Tfap2b;;chr11:96132767..96132796,+!p2@Hoxb9!0.69!3.92!Hoxb9;;chr5:35731493..35731531,+!p1@Hmx1!0.69!3.92!Hmx1;;chr18:3281034..3281104,-!p1@Crem!0.68!30.44!Crem;;chr9:69137716..69137744,+!p1@Rora!0.67!26.52!Rora;;chr8:123640063..123640077,+!p1@Foxc2!0.67!7.15!Foxc2;;chr15:102820964..102821006,+!p1@Hoxc8!0.67!3.69!Hoxc8;;chr10:88996274..88996286,-!p4@Nr1h4!0.67!3.69!Nr1h4;;chr2:74549968..74549996,+!p1@Hoxd3!0.66!4.61!Hoxd3;;chr2:74542918..74542971,+!p1@Hoxd8!0.65!5.53!Hoxd8;;chr6:52190467..52190500,-!p1@Hoxa10!0.65!3.46!Hoxa10;;chr2:181501745..181501778,+!p1@Myt1!0.65!3.46!Myt1;;chr13:83643159..83643226,+!p3@Mef2c!0.65!3.46!Mef2c;;chr2:44965856..44965896,-!p5@Zeb2!0.63!14.53!Zeb2;;chr11:96145393..96145407,+!p3@Hoxb7!0.63!3.23!Hoxb7;;chr11:83664365..83664383,+!p1@Hnf1b!0.63!3.23!Hnf1b;;chr9:68501522..68501538,+!p4@Rora!0.62!6.46!Rora;;chr15:102865048..102865073,+!p3@Hoxc4!0.62!4.15!Hoxc4;;chr2:163028808..163028869,+!p1@Tox2!0.61!12.91!Tox2;;chr5:120121446..120121461,+!p2@Tbx3!0.61!11.76!Tbx3;;chr2:104966766..104966786,+!p1@Wt1!0.60!5.07!Wt1;;chr2:163372884..163372904,+!p1@Hnf4a!0.60!3.00!Hnf4a;;chr11:57645586..57645597,-!p2@Hand1!0.60!3.00!Hand1;;chr6:52167513..52167549,-!p2@Hoxa7!0.59!4.38!Hoxa7;;chr2:167514456..167514473,+!p1@Cebpb!0.58!153.36!Cebpb;;chr11:96690797..96690813,-!p1@Nfe2l1!0.58!66.42!Nfe2l1;;chr3:95032091..95032183,-!p1@Mllt11!0.58!29.29!Mllt11;;chr11:52096804..52096896,-!p1@Tcf7!0.58!27.67!Tcf7;;chr4:114732112..114732158,+!p1@Tal1!0.58!6.92!Tal1;;chr2:74543397..74543435,+!p2@Hoxd8!0.58!2.77!Hoxd8;;chr7:122989594..122989626,-!p1@Sox6!0.58!2.77!Sox6;;chr7:122989632..122989668,-!p2@Sox6!0.58!2.77!Sox6;;chr2:104966874..104966907,+!p2@Wt1!0.58!2.77!Wt1;;chr15:102839912..102839938,+!p5@Hoxc6!0.58!2.77!Hoxc6;;chr18:3281015..3281028,-!p18@Crem!0.58!2.77!Crem;;chr19:37509324..37509337,+!p1@Hhex!0.57!23.75!Hhex;;chr3:54559496..54559511,+!p1@Smad9!0.57!6.92!Smad9;;chr15:102865131..102865151,+!p2@Hoxc4!0.57!3.23!Hoxc4;;chr14:65977324..65977372,+!p2@Zfp395!0.56!18.22!Zfp395;;chr5:135582751..135582788,+!p1@Mlxipl!0.56!12.68!Mlxipl;;chr15:35225845..35225867,+!p1@Osr2!0.56!7.84!Osr2;;chr2:146047829..146047847,+!p1@Insm1!0.56!5.30!Insm1;;chr11:18918434..18918489,-!p3@Meis1!0.56!4.61!Meis1;;chr6:52163319..52163342,-!p1@Hoxa3!0.56!4.15!Hoxa3;;chr13:31898637..31898653,+!p2@Foxc1!0.55!5.07!Foxc1;;chr2:74550015..74550057,+!p2@Hoxd3!0.55!2.54!Hoxd3;;chr4:87452180..87452196,-!p3@Mllt3!0.54!5.53!Mllt3;;chr10:80555320..80555378,-!p1@Creb3l3!0.54!3.00!Creb3l3;;chr8:90328310..90328362,-!p3@Zfp423!0.54!3.00!Zfp423;;chr5:120121020..120121049,+!p1@Tbx3!0.53!18.45!Tbx3;;chrX:45245679..45245702,-!p1@Smarca1!0.53!13.15!Smarca1;;chrX:45245644..45245666,-!p2@Smarca1!0.53!9.22!Smarca1;;chr11:96213288..96213332,+!p@chr11:96213288..96213332,+!0.53!4.61!Hoxb2;;chr4:99322820..99322845,+!p1@Foxd3!0.53!3.23!Foxd3;;chr12:34642682..34642753,+!p2@Twist1!0.52!7.38!Twist1;;chr15:78994907..78994926,-!p1@Sox10!0.52!7.15!Sox10;;chr13:44936126..44936164,+!p6@Jarid2!0.52!2.77!Jarid2;;chr15:103082088..103082136,-!p2@Nfe2!0.52!2.31!Nfe2;;chr15:102828642..102828653,+!p2@Hoxc6!0.52!2.31!Hoxc6;;chr1:19199221..19199234,+!p6@Tfap2b!0.52!2.31!Tfap2b;;chr11:96160360..96160397,+!p3@Hoxb6!0.52!2.31!Hoxb6;;chr12:34642510..34642530,+!p1@Twist1!0.51!8.76!Twist1;;chrX:137135036..137135064,-!p4@Tsc22d3!0.51!5.07!Tsc22d3;;chr10:86956396..86956411,-!p1@Ascl1!0.51!3.92!Ascl1;;chr11:85646303..85646329,+!p1@Tbx2!0.50!18.45!Tbx2;;chr16:3847206..3847307,+!p1@Zfp174!0.50!13.38!Zfp174;;chr10:126778916..126778974,-!p1@Gli1!0.50!5.77!Gli1;;chr11:11584970..11585030,+!p2@Ikzf1!0.50!3.46!Ikzf1;;chr6:52167459..52167492,-!p1@Hoxa7!0.50!2.77!Hoxa7;;chr10:76424613..76424689,-!p1@Pcbp3!0.49!59.27!Pcbp3;;chr2:25562346..25562433,+!p1@Bmyc!0.49!51.66!Bmyc;;chr4:87452200..87452229,-!p2@Mllt3!0.49!5.30!Mllt3;;chr14:63864056..63864102,-!p1@Gata4!0.49!4.15!Gata4;;chr15:35225873..35225889,+!p2@Osr2!0.49!2.08!Osr2;;chr15:102821007..102821021,+!p2@Hoxc8!0.49!2.08!Hoxc8;;chr11:96143843..96143868,+!p3@Hoxb8!0.49!2.08!Hoxb8;;chr18:11052516..11052525,+!p5@Gata6!0.49!2.08!Gata6;;chr2:74549945..74549965,+!p4@Hoxd3!0.49!2.08!Hoxd3;;chr1:136186574..136186592,+!p1@Myog!0.49!2.08!Myog;;chr7:77511234..77511302,-!p2@Nr2f2!0.48!17.53!Nr2f2;;chr2:25562263..25562314,+!p2@Bmyc!0.48!10.15!Bmyc;;chr5:32438395..32438406,+!p3@Fosl2!0.48!3.46!Fosl2;;chr5:120121091..120121100,+!p7@Tbx3!0.48!2.54!Tbx3;;chr18:11052642..11052659,+!p1@Gata6!0.47!13.15!Gata6;;chr1:186556323..186556370,-!p2@Hlx!0.47!6.69!Hlx;;chr9:48644037..48644067,-!p2@Zbtb16!0.47!6.00!Zbtb16;;chr7:77511403..77511450,-!p3@Nr2f2!0.47!5.07!Nr2f2;;chr11:85646427..85646451,+!p4@Tbx2!0.46!3.92!Tbx2;;chr14:17407549..17407575,-!p3@Rarb!0.46!3.23!Rarb;;chr9:96653072..96653154,-!p1@Zbtb38!0.45!6.23!Zbtb38;;chr6:108610766..108610781,+!p2@Bhlhe40!0.45!3.92!Bhlhe40;;chr4:48058016..48058032,+!p3@Nr4a3!0.45!3.69!Nr4a3;;chr6:52154386..52154407,-!p2@Hoxa5!0.45!2.54!Hoxa5;;chr6:52161666..52161711,-!p1@Hoxa6!0.45!1.84!Hoxa6;;chr15:102839976..102839989,+!p4@Hoxc6!0.45!1.84!Hoxc6;;chr15:102797288..102797302,+!p1@Hoxc10!0.45!1.84!Hoxc10;;chr1:4483679..4483695,-!p1@Sox17!0.44!11.07!Sox17;;chr2:115890469..115890485,-!p7@Meis2!0.44!3.23!Meis2;;chr1:165243792..165243808,-!p1@Prrx1!0.43!7.84!Prrx1;;chr2:115891409..115891425,-!p2@Meis2!0.43!6.46!Meis2;;chr11:85646263..85646278,+!p2@Tbx2!0.43!5.53!Tbx2;;chr11:18918820..18918831,-!p4@Meis1!0.43!3.92!Meis1;;chr14:67853425..67853454,+!p1@Ebf2!0.43!2.77!Ebf2;;chr8:111227354..111227401,+!p@chr8:111227354..111227401,+!0.43!2.54!Zfhx3;;chr16:43363190..43363242,+!p2@Zbtb20!0.42!6.69!Zbtb20;;chr2:115891427..115891441,-!p4@Meis2!0.42!4.38!Meis2;;chr3:54559550..54559570,+!p4@Smad9!0.42!2.77!Smad9;;chr7:77511622..77511657,-!p5@Nr2f2!0.42!2.31!Nr2f2;;chr5:125538703..125538715,-!p5@Ncor2!0.42!2.08!Ncor2;;chr2:74536026..74536039,+!p1@Hoxd9!0.42!1.61!Hoxd9;;chr11:96144050..96144065,+!p5@Hoxb8!0.42!1.61!Hoxb8;;chr11:96143728..96143745,+!p4@Hoxb8!0.42!1.61!Hoxb8;;chr1:19202185..19202187,+!p9@Tfap2b!0.42!1.61!Tfap2b;;chr2:24331085..24331100,-!p1@Pax8!0.42!1.61!Pax8;;chr2:104966933..104966966,+!p3@Wt1!0.42!1.61!Wt1;;chr12:30213247..30213333,+!p1@Myt1l!0.42!1.61!Myt1l;;chr14:76904313..76904328,+!p1@Tsc22d1!0.41!445.78!Tsc22d1;;chr10:119913546..119913583,-!p3@Hmga2!0.41!4.15!Hmga2;;chr2:163028888..163028905,+!p3@Tox2!0.41!2.08!Tox2;;chr4:150503457..150503498,-!p3@Camta1!0.41!1.84!Camta1;;chr2:181406327..181406350,-!p1@Sox18!0.40!71.26!Sox18;;chr2:115891534..115891589,-!p1@Meis2!0.40!31.82!Meis2;;chr4:120488308..120488366,-!p1@Nfyc!0.40!12.45!Nfyc;;chr15:76287876..76287894,+!p1@Scx!0.40!11.99!Scx;;chr11:70043257..70043263,-!p1@Bcl6b!0.40!3.23!Bcl6b;;chr7:17642018..17642045,-!p4@Hif3a!0.40!1.84!Hif3a;;chr1:186556410..186556424,-!p1@Hlx!0.39!6.23!Hlx;;chr5:120121169..120121171,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@Pbx1!0.18!2.31!Pbx1;;chr1:186556375..186556404,-!p3@Hlx!0.18!1.61!Hlx;;chr7:135020469..135020485,+!p4@Zfp646!0.18!1.61!Zfp646;;chr10:22451100..22451111,-!p5@Tbpl1!0.18!1.61!Tbpl1;;chr11:101755669..101755686,-!p1@Meox1!0.18!1.61!Meox1;;chr8:94325847..94325869,-!p3@Irx3!0.18!1.38!Irx3;;chr9:122775126..122775133,-!p3@Zfp445!0.18!1.38!Zfp445;;chr2:152223586..152223604,-!p5@Sox12!0.18!1.15!Sox12;;chr2:162880306..162880319,+!p3@Mybl2!0.18!1.15!Mybl2;;chr15:103170561..103170572,-!p4@Zfp385a!0.18!1.15!Zfp385a;;chr11:120491440..120491474,-!p3@Mafg!0.18!1.15!Mafg;;chr11:44430877..44430899,+!p6@Ebf1!0.18!0.92!Ebf1;;chr2:165213716..165213732,-!p2@Zfp334!0.18!0.92!Zfp334;;chr9:68501549..68501564,+!p6@Rora!0.18!0.92!Rora;;chr3:96002383..96002407,-!p4@Bola1!0.18!0.92!Bola1;;chr4:48058102..48058110,+!p5@Nr4a3!0.18!0.69!Nr4a3;;chr14:18493480..18493494,+!p2@Thrb!0.18!0.69!Thrb;;chr11:5420954..5420969,+!p2@Xbp1!0.17!16.14!Xbp1;;chr8:28087578..28087599,+!p2@Zfp703!0.17!12.22!Zfp703;;chr19:46380172..46380231,+!p2@Nfkb2!0.17!8.53!Nfkb2;;chr10:30522690..30522752,-!p2@Ncoa7!0.17!7.38!Ncoa7;;chr10:20032330..20032345,+!p3@Bclaf1!0.17!5.77!Bclaf1;;chr7:6124098..6124133,+!p1@Zfp444!0.17!5.30!Zfp444;;chr19:5637501..5637517,+!p4@Rela!0.17!4.61!Rela;;chr15:103170533..103170556,-!p1@Zfp385a!0.17!4.15!Zfp385a;;chr14:22319053..22319105,+!p2@Myst4!0.17!3.69!Myst4;;chr19:8876976..8877011,+!p1@Zbtb3!0.17!3.69!Zbtb3;;chr18:55152179..55152194,-!p5@Zfp608!0.17!3.00!Zfp608;;chr14:17407970..17408015,-!p2@Rarb!0.17!2.77!Rarb;;chr12:3807001..3807016,+!p5@Dnmt3a!0.17!2.54!Dnmt3a;;chr17:71200558..71200572,-!p4@Tgif1!0.17!2.54!Tgif1;;chr11:102180407..102180419,-!p6@Ubtf!0.17!2.08!Ubtf;;chr14:56443806..56443848,+!p1@Nfatc4!0.17!1.84!Nfatc4;;chr5:65203599..65203617,+!p8@Klf3!0.17!1.38!Klf3;;chr13:64254502..64254515,-!p3@Zfp367!0.17!1.15!Zfp367;;chr8:94325486..94325510,-!p4@Irx3!0.17!0.92!Irx3;;chr1:120950269..120950287,-!p6@Gli2!0.17!0.92!Gli2;;chr4:135842093..135842105,+!p6@Zfp46!0.17!0.92!Zfp46;;chr11:106128936..106128955,-!p4@Smarcd2!0.17!0.69!Smarcd2;;chr18:53623836..53623839,+!p1@Prdm6!0.17!0.69!Prdm6;;chr12:56593574..56593592,-!p1@Nfkbia!0.16!66.88!Nfkbia;;chr6:108610610..108610676,+!p1@Bhlhe40!0.16!63.42!Bhlhe40;;chr11:60023912..60023930,-!p1@Srebf1!0.16!31.13!Srebf1;;chr2:91864661..91864686,-!p1@Creb3l1!0.16!27.90!Creb3l1;;chr17:35653725..35653780,-!p1@Tcf19!0.16!21.68!Tcf19;;chr1:52176315..52176343,+!p1@Stat1!0.16!18.22!Stat1;;chr19:10315179..10315241,-!p1@Gm98!0.16!13.15!Gm98;;chr7:13551180..13551243,+!p1@Zfp324!0.16!9.92!Zfp324;;chr10:92773818..92773906,-!p2@Elk3!0.16!5.53!Elk3;;chr1:170362335..170362356,-!p4@Pbx1!0.16!5.30!Pbx1;;chr4:148178529..148178548,+!p3@Casz1!0.16!2.31!Casz1;;chr11:96690779..96690790,-!p3@Nfe2l1!0.16!2.31!Nfe2l1;;chr10:119913278..119913298,-!p2@Hmga2!0.16!2.08!Hmga2;;chr14:52935788..52935817,-!p2@Sall2!0.16!2.08!Sall2;;chr9:87626083..87626108,-!p1@Tbx18!0.16!2.08!Tbx18;;chr17:87153440..87153451,+!p4@Epas1!0.16!1.84!Epas1;;chr16:43363837..43363842,+!p11@Zbtb20!0.16!1.61!Zbtb20;;chr9:121668850..121668885,+!p2@Zfp651!0.16!1.61!Zfp651;;chr18:69681483..69681514,+!p11@Tcf4!0.16!1.38!Tcf4;;chr14:22807216..22807231,-!p3@Zfp503!0.16!1.38!Zfp503;;chr3:34548909..34548927,+!p1@Sox2!0.16!1.38!Sox2;;chr12:113916993..113917009,+!p2@Zbtb42!0.16!1.38!Zbtb42;;chr2:30700788..30700824,+!p2@Prrx2!0.16!1.15!Prrx2;;chr2:115890294..115890334,-!p9@Meis2!0.16!0.92!Meis2;;chr17:51971960..51971979,-!p1@Satb1!0.16!0.92!Satb1;;chr18:5591389..5591406,+!p3@Zeb1!0.16!0.69!Zeb1;;chr1:93698068..93698085,+!p2@Twist2!0.16!0.69!Twist2;;chr1:52065508..52065522,+!p2@Stat4!0.16!0.69!Stat4;;chr2:147871627..147871641,-!p1@Foxa2!0.16!0.46!Foxa2;;chr2:168592636..168592651,-!p1@Sall4!0.16!0.46!Sall4;;chr2:163030164..163030178,+!p6@Tox2!0.16!0.46!Tox2;;chr2:104966909..104966920,+!p8@Wt1!0.16!0.46!Wt1;;chr2:115891770..115891799,-!p25@Meis2!0.16!0.46!Meis2;;chr2:32229906..32229942,+!p3@Ciz1!0.16!0.46!Ciz1;;chr1:87497443..87497454,+!p3@Gm2427,p3@Sp140!0.16!0.46!Sp140;;chr2:168032254..168032259,-!p6@Adnp!0.16!0.46!Adnp;;chr1:19199064..19199075,+!p10@Tfap2b!0.16!0.46!Tfap2b;;chr2:24331116..24331125,-!p2@Pax8!0.16!0.46!Pax8;;chr1:19199119..19199134,+!p4@Tfap2b!0.16!0.46!Tfap2b;;chr11:53164494..53164501,+!p10@Aff4!0.16!0.46!Aff4;;chr10:5734473..5734489,-!p5@Esr1!0.16!0.46!Esr1;;chr11:96160119..96160135,+!p7@Hoxb6!0.16!0.46!Hoxb6;;chr11:96145537..96145556,+!p6@Hoxb7!0.16!0.46!Hoxb7;;chr11:52070502..52070527,-!p7@Tcf7!0.16!0.46!Tcf7;;chr11:100720767..100720797,+!p4@Stat5a!0.16!0.46!Stat5a;;chr11:100721492..100721499,+!p5@Stat5a!0.16!0.46!Stat5a;;chr10:119913266..119913277,-!p6@Hmga2!0.16!0.46!Hmga2;;chr11:33103589..33103599,-!p3@Tlx3!0.16!0.46!Tlx3;;chr11:101645774..101645795,-!p9@Etv4!0.16!0.46!Etv4;;chr11:34108085..34108092,-!p1@Foxi1!0.16!0.46!Foxi1;;chr11:90249521..90249551,-!p3@Hlf!0.16!0.46!Hlf;;chr8:94881686..94881700,+!p4@Irx5!0.16!0.46!Irx5;;chr7:52252978..52252989,+!p5@Irf3!0.16!0.46!Irf3;;chr9:91260594..91260612,-!p1@Zic1!0.16!0.46!Zic1;;chr9:96159210..96159221,+!p10@Tfdp2!0.16!0.46!Tfdp2;;chr7:53631818..53631829,+!p2@Myod1!0.16!0.46!Myod1;;chr7:52960888..52960902,+!p7@Dbp!0.16!0.46!Dbp;;chrX:7544928..7544938,-!p2@Gata1!0.16!0.46!Gata1;;chr6:52158644..52158677,-!p2@Hoxa6!0.16!0.46!Hoxa6;;chr6:52184880..52184893,-!p6@Hoxa10!0.16!0.46!Hoxa10;;chr5:140019843..140019858,+!p2@Uncx!0.16!0.46!Uncx;;chr6:52133827..52133854,-!p2@Hoxa3!0.16!0.46!Hoxa3;;chr5:31754898..31754907,+!p5@Zfp512!0.16!0.46!Zfp512;;chr5:120120409..120120416,+!p17@Tbx3!0.16!0.46!Tbx3;;chr5:67490333..67490342,-!p5@Phox2b!0.16!0.46!Phox2b;;chr6:29479308..29479325,+!p3@Irf5!0.16!0.46!Irf5;;chr6:29479277..29479296,+!p2@Irf5!0.16!0.46!Irf5;;chr5:92391970..92391984,+!p5@Thap6!0.16!0.46!Thap6;;chr7:150155143..150155156,-!p1@Ascl2!0.16!0.46!Ascl2;;chr5:120120708..120120713,+!p12@Tbx3!0.16!0.46!Tbx3;;chr18:69681413..69681424,+!p24@Tcf4!0.16!0.46!Tcf4;;chr16:55838743..55838754,-!p6@Nfkbiz!0.16!0.46!Nfkbiz;;chr16:94085471..94085495,+!p1@Sim2!0.16!0.46!Sim2;;chr15:85566241..85566253,+!p6@Ppara!0.16!0.46!Ppara;;chr16:43364258..43364270,+!p27@Zbtb20!0.16!0.46!Zbtb20;;chr19:37511111..37511115,+!p2@Hhex!0.16!0.46!Hhex;;chr4:48058252..48058261,+!p6@Nr4a3!0.16!0.46!Nr4a3;;chr2:9800094..9800108,-!p3@Gata3!0.16!0.46!Gata3;;chr3:130813586..130813604,+!p7@Lef1!0.16!0.46!Lef1;;chr2:9809374..9809396,-!p4@Gata3!0.16!0.46!Gata3;;chr4:150503544..150503561,-!p8@Camta1!0.16!0.46!Camta1;;chr3:3508005..3508021,+!p3@Hnf4g!0.16!0.46!Hnf4g;;chr3:66785857..66785873,-!p1@Shox2!0.16!0.46!Shox2;;chr2:74542882..74542894,+!p10@Hoxd8!0.16!0.46!Hoxd8;;chr2:74543103..74543135,+!p4@Hoxd8!0.16!0.46!Hoxd8;;chr2:74513125..74513143,+!p1@Hoxd12!0.16!0.46!Hoxd12;;chr2:74543143..74543158,+!p9@Hoxd8!0.16!0.46!Hoxd8;;chr2:74529970..74529997,+!p1@Hoxd10!0.16!0.46!Hoxd10;;chr3:99057256..99057268,+!p3@Tbx15!0.16!0.46!Tbx15;;chr2:74560109..74560131,+!p1@Hoxd4!0.16!0.46!Hoxd4;;chr4:13678514..13678539,+!p14@Runx1t1!0.16!0.46!Runx1t1;;chr3:8667049..8667056,-!p5@Hey1!0.16!0.46!Hey1;;chr3:98186461..98186476,+!p2@Zfp697!0.16!0.46!Zfp697;;chr2:74529998..74530020,+!p2@Hoxd10!0.16!0.46!Hoxd10;;chr14:17407671..17407684,-!p7@Rarb!0.16!0.46!Rarb;;chr14:17408022..17408043,-!p6@Rarb!0.16!0.46!Rarb;;chr14:67853682..67853702,+!p4@Ebf2!0.16!0.46!Ebf2;;chr13:40824310..40824314,-!p6@Tfap2a!0.16!0.46!Tfap2a;;chr13:40825465..40825469,-!p2@Tfap2a!0.16!0.46!Tfap2a;;chr14:32979060..32979091,+!p4@Gm6768,p4@Ncoa4!0.16!0.46!Ncoa4;;chr13:99124236..99124243,+!p2@Foxd1!0.16!0.46!Foxd1;;chr13:40826961..40827001,-!p4@Tfap2a!0.16!0.46!Tfap2a;;chr12:37835219..37835230,+!p5@Meox2!0.16!0.46!Meox2;;chr15:102820912..102820923,+!p5@Hoxc8!0.16!0.46!Hoxc8;;chr15:102844431..102844445,+!p1@Hoxc5!0.16!0.46!Hoxc5;;chr15:76352740..76352781,-!p5@Scrt1!0.16!0.46!Scrt1;;chr13:83643232..83643254,+!p5@Mef2c!0.16!0.46!Mef2c;;chr15:102797225..102797243,+!p2@Hoxc10!0.16!0.46!Hoxc10;;chr13:44936077..44936096,+!p9@Jarid2!0.16!0.46!Jarid2;;chr15:102797183..102797205,+!p4@Hoxc10!0.16!0.46!Hoxc10;;chr15:103085864..103085876,-!p5@Nfe2!0.16!0.46!Nfe2;;chr6:83299445..83299490,+!p1@Bola3!0.15!53.04!Bola3;;chr18:70728080..70728160,+!p2@Mbd2!0.15!24.45!Mbd2;;chr13:96095213..96095255,+!p1@Zbed3!0.15!18.68!Zbed3;;chr5:32438831..32438878,+!p1@Fosl2!0.15!12.45!Fosl2;;chr6:72739185..72739232,-!p1@Tcf7l1!0.15!12.45!Tcf7l1;;chr6:48395426..48395504,-!p2@Zfp467!0.15!11.30!Zfp467;;chrX:131543731..131543764,-!p1@Zmat1!0.15!8.53!Zmat1;;chr7:25292331..25292421,+!p1@Zfp428!0.15!8.30!Zfp428;;chr4:133801494..133801519,-!p2@Zfp593!0.15!8.30!Zfp593;;chr2:169956656..169956684,-!p1@Zfp217!0.15!7.84!Zfp217;;chr6:133985993..133986029,+!p2@Etv6!0.15!7.61!Etv6;;chr12:28027561..28027591,-!p1@Sox11!0.15!7.61!Sox11;;chr2:130120884..130120972,+!p1@Ebf4!0.15!6.69!Ebf4;;chr3:95238432..95238455,+!p2@Arnt!0.15!6.69!Arnt;;chr7:30568977..30569047,+!p1@Zfp30!0.15!6.46!Zfp30;;chr10:79389784..79389833,+!p1@Arid3a!0.15!6.00!Arid3a;;chr17:84105510..84105540,+!p2@Mta3!0.15!6.00!Mta3;;chr13:99954640..99954681,+!p1@Zfp366!0.15!3.92!Zfp366;;chr5:134790428..134790441,-!p5@Gtf2i!0.15!3.92!Gtf2i;;chr17:69732364..69732405,+!p2@Zfp161!0.15!3.69!Zfp161;;chr18:83080305..83080335,+!p2@Zfp516!0.15!3.23!Zfp516;;chr9:63869850..63869873,-!p2@Smad6!0.15!3.00!Smad6;;chr8:125778192..125778217,+!p2@Zfp276!0.15!2.77!Zfp276;;chr8:13338745..13338756,+!p2@Tfdp1!0.15!2.08!Tfdp1;;chr4:128483731..128483757,-!p4@Zfp362!0.15!2.08!Zfp362;;chr4:62626682..62626705,+!p2@Zfp618!0.15!2.08!Zfp618;;chr11:18918982..18918993,-!p5@Meis1!0.15!1.84!Meis1;;chr17:34729160..34729171,+!p3@Pbx2!0.15!1.61!Pbx2;;chr17:51951634..51951651,-!p6@Satb1!0.15!1.61!Satb1;;chr5:77543897..77543911,-!p2@Hopx!0.15!1.61!Hopx;;chr2:34227524..34227547,-!p2@Pbx3!0.15!1.61!Pbx3;;chr9:122812356..122812381,+!p@chr9:122812356..122812381,+!0.15!1.61!Gm8008;;chr12:9581284..9581303,+!p2@Osr1!0.15!1.61!Osr1;;chr12:3807076..3807086,+!p8@Dnmt3a!0.15!1.38!Dnmt3a;;chr13:59924173..59924194,-!p4@Zcchc6!0.15!1.38!Zcchc6;;chr7:30092993..30093076,+!p1@Dpf1!0.15!1.38!Dpf1;;chr10:20880698..20880717,-!p3@Myb!0.15!1.15!Myb;;chr2:34227659..342276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+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316,FF:0000294
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 36: / Line 42: @@
 |has_quality=
 |id=FF:1263-45I1
-|is_a=EFO:0002091;;FF:0000004;;FF:0000103;;FF:0000300;;FF:0011520
+|is_a=EFO:0002091;;FF:0000300;;FF:0011520
+|is_obsolete=
+|library_id=CNhs11043
+|library_id_phase_based=2:CNhs11043
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;1263
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;1263
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520embryo%2520E17.CNhs11043.1263-45I1.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520embryo%2520E17.CNhs11043.1263-45I1.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520embryo%2520E17.CNhs11043.1263-45I1.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520embryo%2520E17.CNhs11043.1263-45I1.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520embryo%2520E17.CNhs11043.1263-45I1.mm9.nobarcode.rdna.fa.gz
 |name=adrenal gland, embryo E17
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11043,LSID732,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|repeat_enrich_byfamily=0.138313762074809,0,0,0,0,0,0.0769545984648525,0,0,0,0,0.464267635384667,0,0,0,0,0,0,-0.0271744753232449,0,0,0,0.0901223798974778,0,0,0,0,0,0,0,0,0,0.133583218117023,0,0,0,0.16471887555933,0,0.0467866329193624,0.0437916866566366,0.021617921620491,0.304691264089146,-0.179746258112873,0,0,0,0,0,0,0,0,0,0,0.48792130567188,0.0901223798974778,0.0987133279958893,0.0901223798974778,0,0,0,-0.0428469550828748,0,0,0,0.0901223798974778,0,0.0464387144980693,0.0665996607831882,0.390515833010126,0.106302810363324,0,0,-0.0134446782431885,-0.0712475783620361,0,0,0,0.0540878332668083,-0.218664562617995,0.0112907850575704,0,0,0,0,0,0,0.0170819756220332,0.264111243246273,0.0607510376673445,0,0,0.0901223798974778,0,0
 |rna_box=45
 |rna_catalog_number=
@@ Line 57: / Line 76: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 76: / Line 96: @@
 |sample_tissue=adrenal gland
 |top_motifs=PBX1:1.45723780239;PAX1,9:1.43764598109;ZNF423:1.16959440201;FOXD3:1.15968448336;HOX{A5,B5}:1.15058061278;RXR{A,B,G}:1.07305025563;TAL1_TCF{3,4,12}:1.04407720438;NFE2L2:0.997336074843;GLI1..3:0.98991850095;ZIC1..3:0.968551071528;NFIX:0.923477552528;MYBL2:0.84994145458;XCPE1{core}:0.821034997139;NR1H4:0.81348127663;ARID5B:0.794842407238;FOXL1:0.766957279589;TFAP4:0.764023826354;SOX5:0.709139467618;IKZF1:0.68149668207;FOX{D1,D2}:0.678346564258;EBF1:0.678175128706;BACH2:0.662581023215;GATA6:0.660337162559;CEBPA,B_DDIT3:0.651271673852;EVI1:0.643752222843;EP300:0.632572243375;GCM1,2:0.6167149616;LEF1_TCF7_TCF7L1,2:0.612925302392;NFE2:0.59056687357;HSF1,2:0.589968616208;NR5A1,2:0.565154690904;ADNP_IRX_SIX_ZHX:0.555659241752;PATZ1:0.535017095081;GFI1:0.508220351287;TBP:0.472109209336;ONECUT1,2:0.46817725679;TFAP2{A,C}:0.467640388015;FOSL2:0.464816560011;IKZF2:0.463942812117;ESRRA:0.462933995956;NKX3-2:0.449242556115;EN1,2:0.440267804453;ZNF238:0.439331769065;TFCP2:0.417054899284;SP1:0.413882936669;UFEwm:0.413150658434;GTF2I:0.408503457578;ZNF148:0.398820024044;TLX1..3_NFIC{dimer}:0.396025451194;NANOG{mouse}:0.391923853437;RREB1:0.377156683735;HOXA9_MEIS1:0.375939376179;PAX5:0.362119437582;FOXP1:0.340747298906;GFI1B:0.329995251258;TEAD1:0.313145451898;HNF1A:0.295779507695;MAZ:0.279657958257;STAT2,4,6:0.278815522357;SRF:0.263415847073;NFY{A,B,C}:0.259069809543;TOPORS:0.257353690095;GZF1:0.197230439344;NANOG:0.165211264276;PAX4:0.163811824387;NKX3-1:0.162710061388;REST:0.126823405554;AR:0.122279426636;FOX{F1,F2,J1}:0.121608050486;GATA4:0.113545958418;DBP:0.111605903936;E2F1..5:0.10928705196;TFAP2B:0.0974043397563;KLF4:0.0829172469541;CDC5L:0.0828468752804;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0564147699712;NR6A1:0.0548404600933;RORA:0.0500841306277;ELF1,2,4:0.0499750344653;HNF4A_NR2F1,2:0.0439195459252;MED-1{core}:0.0362742281462;FOXA2:0.0323797406565;TBX4,5:0.0198590520252;FOXM1:0.016190030289;TGIF1:0.0157392040056;MZF1:0.0141362463587;MEF2{A,B,C,D}:0.0133789339544;PAX6:0.00838857319836;HLF:0.00180661116744;ESR1:-0.0139844861952;ZBTB6:-0.0213117801131;HMGA1,2:-0.0215982298815;VSX1,2:-0.0229645753282;SOX{8,9,10}:-0.0248431434316;MYFfamily:-0.0295615803244;POU1F1:-0.0372276976928;FOXO1,3,4:-0.0418718789258;NKX2-3_NKX2-5:-0.0452191367769;JUN:-0.0664723845253;HIF1A:-0.0679052820326;NFATC1..3:-0.0679396939869;MTF1:-0.0873014187176;ZNF143:-0.0873874865317;YY1:-0.0916408820398;DMAP1_NCOR{1,2}_SMARC:-0.0961945008546;TP53:-0.101365658636;SPIB:-0.111340260717;RXRA_VDR{dimer}:-0.115768177552;ATF4:-0.116574638124;ATF6:-0.118181847539;LHX3,4:-0.125749786826;FOXP3:-0.132539030648;NFIL3:-0.134693360943;TFDP1:-0.146277797426;ATF2:-0.146625503405;HIC1:-0.150823981159;NRF1:-0.152182170432;ZFP161:-0.158290733176;PDX1:-0.161265998121;EGR1..3:-0.171384697459;ELK1,4_GABP{A,B1}:-0.173327112955;BREu{core}:-0.175213757453;RFX1:-0.181260646225;ZNF384:-0.182872141739;ZBTB16:-0.185228453861;ETS1,2:-0.191349752075;MTE{core}:-0.193443291114;HOX{A4,D4}:-0.195724036049;POU5F1:-0.202968388932;GTF2A1,2:-0.203899471203;NR3C1:-0.204094356882;AIRE:-0.209151505629;AHR_ARNT_ARNT2:-0.22648978687;CUX2:-0.226860063663;MYOD1:-0.232954434937;FOS_FOS{B,L1}_JUN{B,D}:-0.235856059634;SOX17:-0.236843305077;NKX6-1,2:-0.239948538531;HES1:-0.240787366419;CDX1,2,4:-0.241640181571;NHLH1,2:-0.250203152242;MYB:-0.27519092274;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.280490869732;FOXN1:-0.293573219742;SREBF1,2:-0.322859458605;CREB1:-0.326397525362;CRX:-0.328194661624;SOX2:-0.348003314383;MAFB:-0.348176059522;ALX4:-0.350341736973;PRRX1,2:-0.35164892294;RUNX1..3:-0.36370593882;NFE2L1:-0.385909970808;ATF5_CREB3:-0.386373471174;PITX1..3:-0.391920238373;NFKB1_REL_RELA:-0.415859321509;FOX{I1,J2}:-0.435034655457;SPI1:-0.43843898601;PRDM1:-0.46929259433;LMO2:-0.477375781437;RFX2..5_RFXANK_RFXAP:-0.505470809468;OCT4_SOX2{dimer}:-0.507048889412;TEF:-0.512400499726;TLX2:-0.531426281395;NKX2-1,4:-0.583334975243;STAT1,3:-0.586700511814;POU2F1..3:-0.600036166726;PPARG:-0.615318990916;IRF1,2:-0.668886122403;SMAD1..7,9:-0.711039021852;POU6F1:-0.715893913635;PAX2:-0.738645391731;SNAI1..3:-0.743693119993;SPZ1:-0.783213721047;HBP1_HMGB_SSRP1_UBTF:-0.800323174689;IRF7:-0.811120984334;BPTF:-0.842833976709;POU3F1..4:-0.924898639384;bHLH_family:-0.964533061158;T:-0.99561615429;HAND1,2:-1.00968914998;STAT5{A,B}:-1.0300315001;NKX2-2,8:-1.03305443987;ZEB1:-1.03760060709;RBPJ:-1.03834550112;ALX1:-1.13075654903;PAX8:-1.19298997973;HMX1:-1.29909106293;FOXQ1:-1.910784116
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:1263-45I1;search_select_hide=table117:1263-45I1
 }}

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FF:1263-45I1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:41, 4 June 2020

CNhs11043

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0