FF:13231-141I9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005522 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005522 | ||
|accession_numbers=CAGE;DRX008607;DRR009479;DRZ000904;DRZ002289;DRZ012254;DRZ013639 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX036542;DRR040596;DRZ006961 | |||
|ancestors_in_anatomy_facet=UBERON:0001013,UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002570 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000350,FF:0000344,FF:0000329,FF:0000096,FF:0000690 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|donor= biol_rep3 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 45: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000329,FF:0000690,FF:13231-141I9 | |fonse_treatment_closure=EFO:0000369,FF:0000329,FF:0000690,FF:13231-141I9 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/mesenchymal%2520stem%2520cells%2520%2528adipose%2520derived%2529%252c%2520adipogenic%2520induction%252c%252000hr00min%252c%2520biol_rep3.CNhs13421.13231-141I9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:13231-141I9 | |id=FF:13231-141I9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000690 | ||
|name=mesenchymal stem cells (adipose derived), adipogenic induction | |is_obsolete= | ||
|library_id=CNhs13421 | |||
|library_id_phase_based=2:CNhs13421 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;13231 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10064.GGTAGC.13231 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;13231 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10064.GGTAGC.13231 | |||
|name=mesenchymal stem cells (adipose derived), adipogenic induction | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13421,LSID1023,release014,COMPLETED | |profile_hcage=CNhs13421,LSID1023,release014,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=141 | |rna_box=141 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 55: | Line 82: | ||
|rna_sample_type= | |rna_sample_type= | ||
|rna_tube_id=141I9 | |rna_tube_id=141I9 | ||
|rna_weight_ug=5. | |rna_weight_ug=5 | ||
|rnaseq_library_id=SRhi10064.GGTAGC | |||
|sample_age=16 | |sample_age=16 | ||
|sample_category=time courses | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 98: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.53083791509848e-214!GO:0005737;cytoplasm;7.19512182790902e-183!GO:0043226;organelle;9.81252602563386e-167!GO:0043229;intracellular organelle;2.01674395661482e-166!GO:0043231;intracellular membrane-bound organelle;2.17204801613755e-163!GO:0043227;membrane-bound organelle;4.34185077165226e-163!GO:0044444;cytoplasmic part;7.25242544304326e-137!GO:0044422;organelle part;1.79163768161546e-122!GO:0044446;intracellular organelle part;4.19441190025774e-121!GO:0032991;macromolecular complex;2.00131625549212e-90!GO:0030529;ribonucleoprotein complex;6.57645172405849e-82!GO:0044237;cellular metabolic process;7.43271812841178e-79!GO:0044238;primary metabolic process;1.47943559837429e-78!GO:0043170;macromolecule metabolic process;1.84139584500375e-71!GO:0005515;protein binding;3.2579525211455e-71!GO:0005739;mitochondrion;1.77504426012313e-65!GO:0043233;organelle lumen;3.65796581593027e-63!GO:0031974;membrane-enclosed lumen;3.65796581593027e-63!GO:0003723;RNA binding;9.45283478250249e-59!GO:0044428;nuclear part;3.99485956905091e-55!GO:0005634;nucleus;9.39691892723442e-55!GO:0005840;ribosome;8.88660501808661e-53!GO:0006412;translation;1.88152659911706e-49!GO:0031090;organelle membrane;9.53464566832301e-49!GO:0003735;structural constituent of ribosome;2.01062167426983e-47!GO:0019538;protein metabolic process;3.07603635746929e-47!GO:0043234;protein complex;9.43443660849329e-45!GO:0016043;cellular component organization and biogenesis;4.4656156142298e-44!GO:0009058;biosynthetic process;3.08638234151734e-43!GO:0044429;mitochondrial part;1.79232422902631e-42!GO:0015031;protein transport;5.03043466034968e-42!GO:0044260;cellular macromolecule metabolic process;5.76311598177291e-42!GO:0044267;cellular protein metabolic process;9.96827012997525e-41!GO:0033279;ribosomal subunit;1.01356924249282e-40!GO:0044249;cellular biosynthetic process;2.1952868016343e-40!GO:0033036;macromolecule localization;2.55221291975158e-40!GO:0009059;macromolecule biosynthetic process;2.45984117109077e-39!GO:0006396;RNA processing;2.52196842353141e-39!GO:0005829;cytosol;3.27096931697364e-39!GO:0045184;establishment of protein localization;7.74973128915273e-39!GO:0008104;protein localization;6.88934470216419e-38!GO:0010467;gene expression;1.74200742418594e-35!GO:0031967;organelle envelope;3.60991450923644e-35!GO:0031975;envelope;6.29449994952853e-35!GO:0031981;nuclear lumen;2.06012468048075e-34!GO:0043283;biopolymer metabolic process;1.22351383385152e-33!GO:0046907;intracellular transport;1.26927987054963e-32!GO:0016071;mRNA metabolic process;3.40960962002166e-32!GO:0008380;RNA splicing;4.45476107646668e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.46591878314939e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.61409851625775e-29!GO:0065003;macromolecular complex assembly;4.37356481969119e-29!GO:0006886;intracellular protein transport;2.29359196066663e-28!GO:0006397;mRNA processing;1.04333141235756e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.98282859246776e-27!GO:0005740;mitochondrial envelope;2.92266577071469e-27!GO:0022607;cellular component assembly;1.35720718718561e-26!GO:0031966;mitochondrial membrane;9.88512531149365e-26!GO:0019866;organelle inner membrane;1.90012359239924e-25!GO:0043228;non-membrane-bound organelle;1.53422413155039e-24!GO:0043232;intracellular non-membrane-bound organelle;1.53422413155039e-24!GO:0006996;organelle organization and biogenesis;2.52423074518511e-24!GO:0005743;mitochondrial inner membrane;3.37546923060458e-24!GO:0044445;cytosolic part;1.80297213717652e-23!GO:0006119;oxidative phosphorylation;3.46939149895147e-22!GO:0005681;spliceosome;1.33394927597042e-21!GO:0005783;endoplasmic reticulum;1.86212499233422e-21!GO:0005654;nucleoplasm;3.48018950408049e-21!GO:0044455;mitochondrial membrane part;3.90545886071685e-21!GO:0006457;protein folding;4.79286074829806e-21!GO:0015934;large ribosomal subunit;5.63695515830767e-21!GO:0015935;small ribosomal subunit;8.87941440261082e-21!GO:0012505;endomembrane system;1.02759678080704e-19!GO:0051649;establishment of cellular localization;1.76124672305731e-19!GO:0051641;cellular localization;3.23259958564685e-19!GO:0022618;protein-RNA complex assembly;1.04987653472567e-18!GO:0048770;pigment granule;1.56087070135856e-18!GO:0042470;melanosome;1.56087070135856e-18!GO:0031980;mitochondrial lumen;4.20957723961919e-18!GO:0005759;mitochondrial matrix;4.20957723961919e-18!GO:0003676;nucleic acid binding;1.43254391870865e-17!GO:0044432;endoplasmic reticulum part;1.72783956819933e-17!GO:0005746;mitochondrial respiratory chain;2.56294306733145e-17!GO:0044451;nucleoplasm part;3.31418053666219e-17!GO:0051186;cofactor metabolic process;7.41917132565884e-17!GO:0006259;DNA metabolic process;1.24673635248092e-16!GO:0016462;pyrophosphatase activity;2.0725795070852e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.48094463667472e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.70826810656308e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;3.56232491374157e-16!GO:0008135;translation factor activity, nucleic acid binding;3.7974570580602e-16!GO:0000502;proteasome complex (sensu Eukaryota);4.87525672464966e-16!GO:0008134;transcription factor binding;6.80809477348399e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.05180018990838e-16!GO:0017111;nucleoside-triphosphatase activity;1.29814729381496e-15!GO:0005794;Golgi apparatus;1.46493823189196e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.75813793394847e-15!GO:0003954;NADH dehydrogenase activity;1.75813793394847e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.75813793394847e-15!GO:0016874;ligase activity;2.33127808834341e-15!GO:0043285;biopolymer catabolic process;2.59770388910147e-15!GO:0006605;protein targeting;7.70327552773441e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.32708720658953e-14!GO:0005761;mitochondrial ribosome;1.58511130286021e-14!GO:0000313;organellar ribosome;1.58511130286021e-14!GO:0044265;cellular macromolecule catabolic process;2.05121625537302e-14!GO:0000166;nucleotide binding;2.52582738321632e-14!GO:0048193;Golgi vesicle transport;3.0038671810665e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;3.03588104531071e-14!GO:0005730;nucleolus;3.94159724423106e-14!GO:0016070;RNA metabolic process;5.44076632676484e-14!GO:0009057;macromolecule catabolic process;5.87637807702834e-14!GO:0019941;modification-dependent protein catabolic process;5.87637807702834e-14!GO:0043632;modification-dependent macromolecule catabolic process;5.87637807702834e-14!GO:0051082;unfolded protein binding;7.2632706195134e-14!GO:0006512;ubiquitin cycle;7.36777352675525e-14!GO:0044257;cellular protein catabolic process;7.36777352675525e-14!GO:0030163;protein catabolic process;8.63706340651261e-14!GO:0006511;ubiquitin-dependent protein catabolic process;8.7892512612258e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.16138725484472e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.88514240520677e-13!GO:0045271;respiratory chain complex I;1.88514240520677e-13!GO:0005747;mitochondrial respiratory chain complex I;1.88514240520677e-13!GO:0006732;coenzyme metabolic process;1.89365986436937e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.99071533885986e-13!GO:0042773;ATP synthesis coupled electron transport;1.99071533885986e-13!GO:0003743;translation initiation factor activity;4.11956210748685e-13!GO:0044248;cellular catabolic process;4.89707409146629e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.08316046264993e-13!GO:0006413;translational initiation;6.6986549767086e-13!GO:0007049;cell cycle;1.71653193185529e-12!GO:0016192;vesicle-mediated transport;3.009845464866e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.09771533699608e-12!GO:0005793;ER-Golgi intermediate compartment;7.86513099526738e-12!GO:0005789;endoplasmic reticulum membrane;1.65014450128502e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;1.71125292491663e-11!GO:0000375;RNA splicing, via transesterification reactions;1.71125292491663e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.71125292491663e-11!GO:0009055;electron carrier activity;5.34180199928146e-11!GO:0006446;regulation of translational initiation;1.13350968737759e-10!GO:0003712;transcription cofactor activity;4.20861513371057e-10!GO:0009259;ribonucleotide metabolic process;6.26473882058474e-10!GO:0016491;oxidoreductase activity;8.77033293990037e-10!GO:0042254;ribosome biogenesis and assembly;1.11218473328347e-09!GO:0006163;purine nucleotide metabolic process;1.14328181135834e-09!GO:0008565;protein transporter activity;1.21961896293944e-09!GO:0032553;ribonucleotide binding;1.30885322865883e-09!GO:0032555;purine ribonucleotide binding;1.30885322865883e-09!GO:0017076;purine nucleotide binding;1.46628807440521e-09!GO:0009150;purine ribonucleotide metabolic process;1.51678638550525e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.53817738959626e-09!GO:0022402;cell cycle process;1.95184418667177e-09!GO:0006913;nucleocytoplasmic transport;2.85025500772547e-09!GO:0006974;response to DNA damage stimulus;3.56522809516399e-09!GO:0006164;purine nucleotide biosynthetic process;4.28000919049474e-09!GO:0048523;negative regulation of cellular process;4.62289483122116e-09!GO:0009260;ribonucleotide biosynthetic process;4.62554291065663e-09!GO:0051169;nuclear transport;5.17885727681707e-09!GO:0009152;purine ribonucleotide biosynthetic process;5.42036125919324e-09!GO:0005635;nuclear envelope;7.38501073661277e-09!GO:0043412;biopolymer modification;8.32265677561564e-09!GO:0008639;small protein conjugating enzyme activity;8.47802671919548e-09!GO:0009060;aerobic respiration;9.17568653470209e-09!GO:0012501;programmed cell death;9.52479127303078e-09!GO:0006366;transcription from RNA polymerase II promoter;9.55299304990602e-09!GO:0005788;endoplasmic reticulum lumen;9.68995476427816e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.00069100221954e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.01139740001404e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.50672670563193e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.50672670563193e-08!GO:0009141;nucleoside triphosphate metabolic process;1.50875972435225e-08!GO:0006915;apoptosis;1.61337530589499e-08!GO:0004842;ubiquitin-protein ligase activity;1.6386969608159e-08!GO:0031965;nuclear membrane;1.67243245508781e-08!GO:0016604;nuclear body;1.71123375865508e-08!GO:0030120;vesicle coat;1.92072701933347e-08!GO:0030662;coated vesicle membrane;1.92072701933347e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.37171316584679e-08!GO:0009056;catabolic process;2.45056429958821e-08!GO:0045333;cellular respiration;2.55533751352339e-08!GO:0006399;tRNA metabolic process;2.60611379266022e-08!GO:0019787;small conjugating protein ligase activity;2.67843828135685e-08!GO:0017038;protein import;3.03764954243494e-08!GO:0015986;ATP synthesis coupled proton transport;3.86893562005062e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.86893562005062e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.42110589567376e-08!GO:0044453;nuclear membrane part;5.02410424024291e-08!GO:0000278;mitotic cell cycle;5.07121318228486e-08!GO:0016887;ATPase activity;5.90243603686079e-08!GO:0008219;cell death;5.90243603686079e-08!GO:0016265;death;5.90243603686079e-08!GO:0006461;protein complex assembly;6.058090509138e-08!GO:0009142;nucleoside triphosphate biosynthetic process;6.31930020918673e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.31930020918673e-08!GO:0051188;cofactor biosynthetic process;7.89611355123471e-08!GO:0006464;protein modification process;7.98153755773068e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.98153755773068e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.54675042771966e-08!GO:0005524;ATP binding;9.28765037812331e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.28765037812331e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.28765037812331e-08!GO:0046034;ATP metabolic process;1.04344396215198e-07!GO:0042623;ATPase activity, coupled;1.10863046887764e-07!GO:0048475;coated membrane;1.2780845338374e-07!GO:0030117;membrane coat;1.2780845338374e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.56835266321528e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.56835266321528e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.56835266321528e-07!GO:0006099;tricarboxylic acid cycle;1.611429411382e-07!GO:0046356;acetyl-CoA catabolic process;1.611429411382e-07!GO:0032559;adenyl ribonucleotide binding;1.71201417445935e-07!GO:0051187;cofactor catabolic process;1.74878947755394e-07!GO:0044431;Golgi apparatus part;1.86703225827093e-07!GO:0048519;negative regulation of biological process;1.96059169426831e-07!GO:0043038;amino acid activation;2.00867123343695e-07!GO:0006418;tRNA aminoacylation for protein translation;2.00867123343695e-07!GO:0043039;tRNA aminoacylation;2.00867123343695e-07!GO:0016607;nuclear speck;2.21696459346415e-07!GO:0030554;adenyl nucleotide binding;2.23266447951716e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;2.26707910024047e-07!GO:0019829;cation-transporting ATPase activity;2.35904956826466e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.98319549076417e-07!GO:0016881;acid-amino acid ligase activity;3.00621141324085e-07!GO:0003924;GTPase activity;3.1158515730612e-07!GO:0009109;coenzyme catabolic process;3.21466278348779e-07!GO:0051726;regulation of cell cycle;3.75739823766001e-07!GO:0000074;regulation of progression through cell cycle;4.03473688123759e-07!GO:0006281;DNA repair;4.16036768578274e-07!GO:0006084;acetyl-CoA metabolic process;4.42286358585668e-07!GO:0065002;intracellular protein transport across a membrane;4.5357441274696e-07!GO:0009719;response to endogenous stimulus;5.62445114951585e-07!GO:0006754;ATP biosynthetic process;5.68625133439894e-07!GO:0006753;nucleoside phosphate metabolic process;5.68625133439894e-07!GO:0005768;endosome;6.17742368903935e-07!GO:0006323;DNA packaging;6.44972634042333e-07!GO:0030532;small nuclear ribonucleoprotein complex;7.6874091216454e-07!GO:0016469;proton-transporting two-sector ATPase complex;8.15743465444384e-07!GO:0065004;protein-DNA complex assembly;8.36215740641073e-07!GO:0051246;regulation of protein metabolic process;8.56249404535412e-07!GO:0003714;transcription corepressor activity;9.92751681379323e-07!GO:0051276;chromosome organization and biogenesis;1.11312721803222e-06!GO:0009117;nucleotide metabolic process;1.51430712106479e-06!GO:0043687;post-translational protein modification;1.74823376417566e-06!GO:0050794;regulation of cellular process;1.94399163132654e-06!GO:0004298;threonine endopeptidase activity;2.06703090611831e-06!GO:0008026;ATP-dependent helicase activity;2.44028542725254e-06!GO:0005643;nuclear pore;2.60316622498652e-06!GO:0006091;generation of precursor metabolites and energy;3.02003725414397e-06!GO:0031324;negative regulation of cellular metabolic process;3.10914268835549e-06!GO:0016564;transcription repressor activity;3.1092343216451e-06!GO:0016853;isomerase activity;3.11444710834529e-06!GO:0045259;proton-transporting ATP synthase complex;3.19406206242123e-06!GO:0004386;helicase activity;3.23148775634859e-06!GO:0009108;coenzyme biosynthetic process;3.41691601637569e-06!GO:0007005;mitochondrion organization and biogenesis;3.41875997292929e-06!GO:0006364;rRNA processing;4.08948247943237e-06!GO:0044440;endosomal part;4.88802328141558e-06!GO:0010008;endosome membrane;4.88802328141558e-06!GO:0008361;regulation of cell size;6.66535993802855e-06!GO:0043566;structure-specific DNA binding;6.75312631266766e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.09762382631454e-06!GO:0016072;rRNA metabolic process;7.17525968758921e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.77398846853938e-06!GO:0016049;cell growth;8.03470561690045e-06!GO:0051789;response to protein stimulus;8.03869491493538e-06!GO:0006986;response to unfolded protein;8.03869491493538e-06!GO:0003697;single-stranded DNA binding;8.25991784311605e-06!GO:0006333;chromatin assembly or disassembly;8.49184906543701e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.39094204790139e-06!GO:0000139;Golgi membrane;9.47971069045903e-06!GO:0005762;mitochondrial large ribosomal subunit;9.48525599180375e-06!GO:0000315;organellar large ribosomal subunit;9.48525599180375e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.00297775744233e-05!GO:0019843;rRNA binding;1.02038668571072e-05!GO:0006752;group transfer coenzyme metabolic process;1.03248190921593e-05!GO:0031988;membrane-bound vesicle;1.07351694320262e-05!GO:0000245;spliceosome assembly;1.17846897795305e-05!GO:0051170;nuclear import;1.23776699171746e-05!GO:0032446;protein modification by small protein conjugation;1.25786816433286e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.34158316609407e-05!GO:0005798;Golgi-associated vesicle;1.37415808588312e-05!GO:0000151;ubiquitin ligase complex;1.3841439692099e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.4501455728867e-05!GO:0005694;chromosome;1.58365517890669e-05!GO:0016859;cis-trans isomerase activity;1.63023646610787e-05!GO:0006606;protein import into nucleus;1.64672423884602e-05!GO:0031252;leading edge;1.67160830240501e-05!GO:0042981;regulation of apoptosis;1.74904017642298e-05!GO:0045454;cell redox homeostasis;1.78024580241192e-05!GO:0016567;protein ubiquitination;1.80653859643232e-05!GO:0043067;regulation of programmed cell death;1.816332818412e-05!GO:0046930;pore complex;1.86818375874058e-05!GO:0006613;cotranslational protein targeting to membrane;1.86818375874058e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.96463383411668e-05!GO:0005667;transcription factor complex;2.21727004782391e-05!GO:0045786;negative regulation of progression through cell cycle;2.30527342380286e-05!GO:0009892;negative regulation of metabolic process;2.76297215467794e-05!GO:0005770;late endosome;3.20779675599721e-05!GO:0016787;hydrolase activity;3.45064384685661e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.46797631676937e-05!GO:0008654;phospholipid biosynthetic process;3.52673376589532e-05!GO:0006334;nucleosome assembly;3.57666286763925e-05!GO:0006260;DNA replication;3.73204897371543e-05!GO:0043069;negative regulation of programmed cell death;3.82135026533779e-05!GO:0022403;cell cycle phase;3.86813158793596e-05!GO:0001558;regulation of cell growth;3.91264846108842e-05!GO:0006916;anti-apoptosis;4.03006143740138e-05!GO:0044427;chromosomal part;4.18605516109553e-05!GO:0005773;vacuole;4.54023322900603e-05!GO:0031982;vesicle;4.54023322900603e-05!GO:0005905;coated pit;4.84352552211682e-05!GO:0043066;negative regulation of apoptosis;4.97248596810864e-05!GO:0031410;cytoplasmic vesicle;5.19006510514336e-05!GO:0000087;M phase of mitotic cell cycle;5.32866040947868e-05!GO:0006403;RNA localization;5.71707992962034e-05!GO:0031497;chromatin assembly;5.76578165185746e-05!GO:0050657;nucleic acid transport;5.76578165185746e-05!GO:0051236;establishment of RNA localization;5.76578165185746e-05!GO:0050658;RNA transport;5.76578165185746e-05!GO:0007067;mitosis;5.76578165185746e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.78200335478791e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.27168086038704e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;7.33437336729368e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;9.16024127945432e-05!GO:0030133;transport vesicle;9.32329616254377e-05!GO:0000785;chromatin;9.32329616254377e-05!GO:0030867;rough endoplasmic reticulum membrane;9.65714172863147e-05!GO:0016481;negative regulation of transcription;9.81532288638828e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000104653554249964!GO:0043021;ribonucleoprotein binding;0.000109747376001525!GO:0015630;microtubule cytoskeleton;0.00013361525020979!GO:0030029;actin filament-based process;0.000151355727498243!GO:0005525;GTP binding;0.000153728644206886!GO:0005813;centrosome;0.000191932101794997!GO:0000323;lytic vacuole;0.000200476104892764!GO:0005764;lysosome;0.000200476104892764!GO:0033116;ER-Golgi intermediate compartment membrane;0.000207603323946904!GO:0000314;organellar small ribosomal subunit;0.00023226388092805!GO:0005763;mitochondrial small ribosomal subunit;0.00023226388092805!GO:0030663;COPI coated vesicle membrane;0.000241336410349304!GO:0030126;COPI vesicle coat;0.000241336410349304!GO:0016563;transcription activator activity;0.000256001210723461!GO:0019867;outer membrane;0.000279072816772559!GO:0005885;Arp2/3 protein complex;0.000279435937644409!GO:0006612;protein targeting to membrane;0.000283469647931662!GO:0050789;regulation of biological process;0.000288744583035415!GO:0003724;RNA helicase activity;0.000297047138162224!GO:0005048;signal sequence binding;0.000312828399870573!GO:0043623;cellular protein complex assembly;0.000347731160913246!GO:0003713;transcription coactivator activity;0.000347731160913246!GO:0007010;cytoskeleton organization and biogenesis;0.000377432250313245!GO:0008250;oligosaccharyl transferase complex;0.000380872839660413!GO:0031968;organelle outer membrane;0.000381310158314117!GO:0016568;chromatin modification;0.000389666821736406!GO:0016779;nucleotidyltransferase activity;0.000402177604252222!GO:0051301;cell division;0.000416923025793408!GO:0044262;cellular carbohydrate metabolic process;0.000432935558761507!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000495554773010251!GO:0005815;microtubule organizing center;0.000510622324674561!GO:0005769;early endosome;0.000543810431593547!GO:0019752;carboxylic acid metabolic process;0.000545099991170991!GO:0030137;COPI-coated vesicle;0.000584348014285832!GO:0008092;cytoskeletal protein binding;0.000592934112111552!GO:0006082;organic acid metabolic process;0.000596113288576068!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000603967265039723!GO:0004576;oligosaccharyl transferase activity;0.000642493345427916!GO:0006793;phosphorus metabolic process;0.00065158888855607!GO:0006796;phosphate metabolic process;0.00065158888855607!GO:0005791;rough endoplasmic reticulum;0.000658405506935168!GO:0009165;nucleotide biosynthetic process;0.000694461257083028!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000704680536237992!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000704680536237992!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000765122716111556!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000835506408716928!GO:0016310;phosphorylation;0.000897847105068183!GO:0051028;mRNA transport;0.000897847105068183!GO:0051920;peroxiredoxin activity;0.000902532954673177!GO:0032561;guanyl ribonucleotide binding;0.000916955698717707!GO:0019001;guanyl nucleotide binding;0.000916955698717707!GO:0043681;protein import into mitochondrion;0.000949383797015544!GO:0016740;transferase activity;0.000973468967833477!GO:0007050;cell cycle arrest;0.00103698087317076!GO:0046474;glycerophospholipid biosynthetic process;0.00103698087317076!GO:0006891;intra-Golgi vesicle-mediated transport;0.00104064658526078!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00107683310976912!GO:0051329;interphase of mitotic cell cycle;0.00107847729799217!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00114765801815619!GO:0018196;peptidyl-asparagine modification;0.00114822790178716!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00114822790178716!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00121959270230799!GO:0015399;primary active transmembrane transporter activity;0.00121959270230799!GO:0003899;DNA-directed RNA polymerase activity;0.00122315070190823!GO:0005741;mitochondrial outer membrane;0.00125161144131024!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00135625726547429!GO:0004177;aminopeptidase activity;0.00138893989188804!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00140037586358762!GO:0006626;protein targeting to mitochondrion;0.00155702164203548!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00157759839607875!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00157759839607875!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00157759839607875!GO:0051325;interphase;0.00162924801802376!GO:0016126;sterol biosynthetic process;0.00176433847795274!GO:0043284;biopolymer biosynthetic process;0.00183184651213197!GO:0019222;regulation of metabolic process;0.00187117873755335!GO:0019899;enzyme binding;0.00191000543522599!GO:0051427;hormone receptor binding;0.00191752307367985!GO:0030658;transport vesicle membrane;0.00203047182279975!GO:0007243;protein kinase cascade;0.00205511268252962!GO:0048471;perinuclear region of cytoplasm;0.0021941688083244!GO:0008610;lipid biosynthetic process;0.00231327952699333!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0023166245549888!GO:0030132;clathrin coat of coated pit;0.00249227717989332!GO:0006414;translational elongation;0.00277654536937032!GO:0022890;inorganic cation transmembrane transporter activity;0.00280746966853125!GO:0051168;nuclear export;0.00283866861427681!GO:0048500;signal recognition particle;0.00297140019569402!GO:0040008;regulation of growth;0.00297895094186602!GO:0016044;membrane organization and biogenesis;0.00299930951309544!GO:0003690;double-stranded DNA binding;0.00303342698672896!GO:0048522;positive regulation of cellular process;0.00309785820780369!GO:0003729;mRNA binding;0.00325344187562749!GO:0008186;RNA-dependent ATPase activity;0.00325344187562749!GO:0000279;M phase;0.00325719333647501!GO:0006979;response to oxidative stress;0.00338925640753248!GO:0043433;negative regulation of transcription factor activity;0.00342251684985646!GO:0035257;nuclear hormone receptor binding;0.00360159573479862!GO:0045892;negative regulation of transcription, DNA-dependent;0.00365063775561247!GO:0008180;signalosome;0.00387505340269321!GO:0046489;phosphoinositide biosynthetic process;0.0038825520070146!GO:0006839;mitochondrial transport;0.00414725648049513!GO:0051087;chaperone binding;0.00461611205510592!GO:0030176;integral to endoplasmic reticulum membrane;0.00467494565725089!GO:0031072;heat shock protein binding;0.00477745039311788!GO:0015992;proton transport;0.00498220557440613!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00507290298173166!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00507290298173166!GO:0007006;mitochondrial membrane organization and biogenesis;0.00509558160553096!GO:0006383;transcription from RNA polymerase III promoter;0.0051336483984698!GO:0046483;heterocycle metabolic process;0.00513556319988372!GO:0005583;fibrillar collagen;0.00518519263736992!GO:0006818;hydrogen transport;0.00519131967643662!GO:0030134;ER to Golgi transport vesicle;0.00519131967643662!GO:0030027;lamellipodium;0.00544401252265816!GO:0043488;regulation of mRNA stability;0.00584769910205386!GO:0043487;regulation of RNA stability;0.00584769910205386!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00588080118139685!GO:0015002;heme-copper terminal oxidase activity;0.00588080118139685!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00588080118139685!GO:0004129;cytochrome-c oxidase activity;0.00588080118139685!GO:0051252;regulation of RNA metabolic process;0.00595840932555453!GO:0030660;Golgi-associated vesicle membrane;0.00601834461325149!GO:0031418;L-ascorbic acid binding;0.00613189334246932!GO:0008154;actin polymerization and/or depolymerization;0.00617122366123391!GO:0008652;amino acid biosynthetic process;0.00617122366123391!GO:0030659;cytoplasmic vesicle membrane;0.00619015919359757!GO:0030127;COPII vesicle coat;0.00623217759888208!GO:0012507;ER to Golgi transport vesicle membrane;0.00623217759888208!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00626473904389621!GO:0016197;endosome transport;0.0063206241829279!GO:0031543;peptidyl-proline dioxygenase activity;0.00650837107950062!GO:0017166;vinculin binding;0.00658432290291392!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00658432290291392!GO:0045047;protein targeting to ER;0.00658432290291392!GO:0030118;clathrin coat;0.006883903079946!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.006883903079946!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00689003712669233!GO:0006740;NADPH regeneration;0.00699629149024917!GO:0006098;pentose-phosphate shunt;0.00699629149024917!GO:0000786;nucleosome;0.00788168014479705!GO:0006520;amino acid metabolic process;0.00791064709983926!GO:0030880;RNA polymerase complex;0.00794753511684256!GO:0004004;ATP-dependent RNA helicase activity;0.0079516469253773!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00808616721948133!GO:0019798;procollagen-proline dioxygenase activity;0.00812516359936313!GO:0051128;regulation of cellular component organization and biogenesis;0.00826946574985781!GO:0006509;membrane protein ectodomain proteolysis;0.00846174208799086!GO:0033619;membrane protein proteolysis;0.00846174208799086!GO:0000049;tRNA binding;0.008642852435622!GO:0007040;lysosome organization and biogenesis;0.00864432160143192!GO:0051287;NAD binding;0.00864432160143192!GO:0046467;membrane lipid biosynthetic process;0.00864827419382595!GO:0003746;translation elongation factor activity;0.00886721165777465!GO:0000096;sulfur amino acid metabolic process;0.00895491382864864!GO:0044420;extracellular matrix part;0.00898271664277897!GO:0005869;dynactin complex;0.00907933881576978!GO:0065009;regulation of a molecular function;0.00913671945856376!GO:0006790;sulfur metabolic process;0.00932848103609495!GO:0048487;beta-tubulin binding;0.00942407789474422!GO:0000059;protein import into nucleus, docking;0.00951806258081682!GO:0008139;nuclear localization sequence binding;0.0103548873706628!GO:0008320;protein transmembrane transporter activity;0.0104629570062385!GO:0008312;7S RNA binding;0.0105287533685161!GO:0005819;spindle;0.0107068120610784!GO:0016408;C-acyltransferase activity;0.0110789754894286!GO:0001527;microfibril;0.0111122023577899!GO:0003711;transcription elongation regulator activity;0.0114584307024022!GO:0030041;actin filament polymerization;0.0116185626026954!GO:0016363;nuclear matrix;0.0117236314128725!GO:0044452;nucleolar part;0.0120462018865997!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.012123195317791!GO:0016272;prefoldin complex;0.0121454540026557!GO:0005581;collagen;0.0124101802671796!GO:0022884;macromolecule transmembrane transporter activity;0.0126758546459872!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0126758546459872!GO:0043022;ribosome binding;0.0131725416407042!GO:0006402;mRNA catabolic process;0.0131763117557881!GO:0008033;tRNA processing;0.013231978389076!GO:0005684;U2-dependent spliceosome;0.0132488317863195!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0134064465804391!GO:0030125;clathrin vesicle coat;0.0143817286008648!GO:0030665;clathrin coated vesicle membrane;0.0143817286008648!GO:0005862;muscle thin filament tropomyosin;0.0145711222133007!GO:0001726;ruffle;0.0145711222133007!GO:0015631;tubulin binding;0.0148538733248383!GO:0044433;cytoplasmic vesicle part;0.0150146097381759!GO:0031901;early endosome membrane;0.0152429447065568!GO:0006354;RNA elongation;0.0154458363002576!GO:0006650;glycerophospholipid metabolic process;0.0154985975304576!GO:0031902;late endosome membrane;0.0155718526635346!GO:0005586;collagen type III;0.0156312511962321!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0158617750494637!GO:0000428;DNA-directed RNA polymerase complex;0.0158617750494637!GO:0006778;porphyrin metabolic process;0.0164423025677585!GO:0033013;tetrapyrrole metabolic process;0.0164423025677585!GO:0051539;4 iron, 4 sulfur cluster binding;0.0166022550015532!GO:0032984;macromolecular complex disassembly;0.0166924044583587!GO:0050662;coenzyme binding;0.0167913672982341!GO:0031529;ruffle organization and biogenesis;0.0169434839703755!GO:0000339;RNA cap binding;0.0173841418395524!GO:0003779;actin binding;0.0178318399475076!GO:0006289;nucleotide-excision repair;0.0179762157991279!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0179818126966784!GO:0043492;ATPase activity, coupled to movement of substances;0.0180515947078861!GO:0006595;polyamine metabolic process;0.0180829342101528!GO:0030521;androgen receptor signaling pathway;0.0185498451025669!GO:0006118;electron transport;0.0191193482213507!GO:0007033;vacuole organization and biogenesis;0.0193570424194068!GO:0008047;enzyme activator activity;0.0199361032765317!GO:0000082;G1/S transition of mitotic cell cycle;0.0206249077153363!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.020914819388765!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0209530169964077!GO:0009112;nucleobase metabolic process;0.0211897504740258!GO:0003756;protein disulfide isomerase activity;0.0212308129661503!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0212308129661503!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0213360335438676!GO:0006693;prostaglandin metabolic process;0.0213360335438676!GO:0006692;prostanoid metabolic process;0.0213360335438676!GO:0051540;metal cluster binding;0.0214093093253987!GO:0051536;iron-sulfur cluster binding;0.0214093093253987!GO:0007021;tubulin folding;0.0220185621536722!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0223690013790246!GO:0006506;GPI anchor biosynthetic process;0.0228410512763837!GO:0065007;biological regulation;0.0228510146473415!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0232291730973663!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0232291730973663!GO:0006695;cholesterol biosynthetic process;0.0232291730973663!GO:0005832;chaperonin-containing T-complex;0.0234951167336225!GO:0035035;histone acetyltransferase binding;0.0237643175499082!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0242256011108199!GO:0042168;heme metabolic process;0.024907766189985!GO:0048037;cofactor binding;0.0254192159254171!GO:0006401;RNA catabolic process;0.0255893969976916!GO:0003684;damaged DNA binding;0.0255893969976916!GO:0030833;regulation of actin filament polymerization;0.0256145779176335!GO:0051101;regulation of DNA binding;0.0257060323125031!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0257060323125031!GO:0000209;protein polyubiquitination;0.0259603085685212!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0264810325324028!GO:0008632;apoptotic program;0.0267308673952067!GO:0031625;ubiquitin protein ligase binding;0.0267308673952067!GO:0006497;protein amino acid lipidation;0.0267308673952067!GO:0012506;vesicle membrane;0.0267308673952067!GO:0009116;nucleoside metabolic process;0.0268804779004214!GO:0031124;mRNA 3'-end processing;0.0270098140019562!GO:0006739;NADP metabolic process;0.0270671312728195!GO:0043624;cellular protein complex disassembly;0.027456396930061!GO:0042802;identical protein binding;0.0275963350269681!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0277546997858383!GO:0033043;regulation of organelle organization and biogenesis;0.0277546997858383!GO:0043241;protein complex disassembly;0.0277955977207904!GO:0003678;DNA helicase activity;0.029709529800364!GO:0048468;cell development;0.029709529800364!GO:0030145;manganese ion binding;0.0305168859304256!GO:0045045;secretory pathway;0.0305168859304256!GO:0031272;regulation of pseudopodium formation;0.0305168859304256!GO:0031269;pseudopodium formation;0.0305168859304256!GO:0031344;regulation of cell projection organization and biogenesis;0.0305168859304256!GO:0031268;pseudopodium organization and biogenesis;0.0305168859304256!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0305168859304256!GO:0031274;positive regulation of pseudopodium formation;0.0305168859304256!GO:0006505;GPI anchor metabolic process;0.0308441674335481!GO:0006352;transcription initiation;0.0308864187549032!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.031022178499324!GO:0008022;protein C-terminus binding;0.0311153683734827!GO:0030508;thiol-disulfide exchange intermediate activity;0.0314904032759958!GO:0045893;positive regulation of transcription, DNA-dependent;0.0316383460783849!GO:0016860;intramolecular oxidoreductase activity;0.0319890645074455!GO:0022408;negative regulation of cell-cell adhesion;0.0327991798300481!GO:0006007;glucose catabolic process;0.0333747136413638!GO:0004228;gelatinase A activity;0.0333961121423616!GO:0001955;blood vessel maturation;0.0333961121423616!GO:0007264;small GTPase mediated signal transduction;0.033972930689238!GO:0033673;negative regulation of kinase activity;0.033972930689238!GO:0006469;negative regulation of protein kinase activity;0.033972930689238!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.034495022033292!GO:0045792;negative regulation of cell size;0.0346953997813514!GO:0007034;vacuolar transport;0.0347153916645029!GO:0030503;regulation of cell redox homeostasis;0.0351574519320682!GO:0045941;positive regulation of transcription;0.0351574519320682!GO:0050811;GABA receptor binding;0.0353243258657565!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0353243258657565!GO:0030119;AP-type membrane coat adaptor complex;0.0356574447975846!GO:0015036;disulfide oxidoreductase activity;0.0358686973524719!GO:0030384;phosphoinositide metabolic process;0.0359418145821662!GO:0051059;NF-kappaB binding;0.0367469845588306!GO:0048144;fibroblast proliferation;0.0369369158528878!GO:0048145;regulation of fibroblast proliferation;0.0369369158528878!GO:0030308;negative regulation of cell growth;0.0379194450279954!GO:0006892;post-Golgi vesicle-mediated transport;0.0384423946065034!GO:0035258;steroid hormone receptor binding;0.0384423946065034!GO:0006611;protein export from nucleus;0.0387758825589667!GO:0030518;steroid hormone receptor signaling pathway;0.0390597494278482!GO:0005637;nuclear inner membrane;0.0392512242302021!GO:0006779;porphyrin biosynthetic process;0.0392974133110932!GO:0033014;tetrapyrrole biosynthetic process;0.0392974133110932!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0392987409053668!GO:0000097;sulfur amino acid biosynthetic process;0.0394600455710514!GO:0009967;positive regulation of signal transduction;0.0394600455710514!GO:0042158;lipoprotein biosynthetic process;0.0401950981647532!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0403078762319106!GO:0032981;mitochondrial respiratory chain complex I assembly;0.041148725349343!GO:0010257;NADH dehydrogenase complex assembly;0.041148725349343!GO:0033108;mitochondrial respiratory chain complex assembly;0.041148725349343!GO:0006950;response to stress;0.041148725349343!GO:0051348;negative regulation of transferase activity;0.0416607814212827!GO:0006261;DNA-dependent DNA replication;0.0419088055722737!GO:0046519;sphingoid metabolic process;0.0421057776617888!GO:0033559;unsaturated fatty acid metabolic process;0.0422327854285244!GO:0006636;unsaturated fatty acid biosynthetic process;0.0422327854285244!GO:0045936;negative regulation of phosphate metabolic process;0.0426037198629583!GO:0006376;mRNA splice site selection;0.0433726033241947!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0433726033241947!GO:0017134;fibroblast growth factor binding;0.0434230686428233!GO:0003702;RNA polymerase II transcription factor activity;0.0434230686428233!GO:0030032;lamellipodium biogenesis;0.0439067672508185!GO:0031371;ubiquitin conjugating enzyme complex;0.0447697994669347!GO:0009081;branched chain family amino acid metabolic process;0.0451925148776666!GO:0048518;positive regulation of biological process;0.0456101994356507!GO:0016251;general RNA polymerase II transcription factor activity;0.0458302685788304!GO:0009303;rRNA transcription;0.0465640385128814!GO:0030911;TPR domain binding;0.046743997466935!GO:0004448;isocitrate dehydrogenase activity;0.0470292357899986!GO:0001953;negative regulation of cell-matrix adhesion;0.0473501492684831!GO:0006144;purine base metabolic process;0.0475980390546436!GO:0006302;double-strand break repair;0.0477809528822484!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0479239216018814!GO:0006220;pyrimidine nucleotide metabolic process;0.0480472569926503!GO:0007030;Golgi organization and biogenesis;0.0481855239112427!GO:0048146;positive regulation of fibroblast proliferation;0.048494386952648!GO:0008538;proteasome activator activity;0.0486005906421423!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0489854708497967!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0489854708497967!GO:0006897;endocytosis;0.0492279940627764!GO:0010324;membrane invagination;0.0492279940627764 | |||
|sample_id=13231 | |sample_id=13231 | ||
|sample_note= | |sample_note= | ||
| Line 75: | Line 105: | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|time= 00hr00min | |||
|timecourse=MSC_to_adipocyte_(human) | |||
|top_motifs=ZNF238:1.74841134209;HES1:1.69713616627;ALX4:1.68869206936;GFI1B:1.58155922062;PAX1,9:1.51891656227;NKX3-1:1.4634183501;ESR1:1.4520293071;XBP1:1.37083115082;HOX{A5,B5}:1.34958607167;UFEwm:1.29085239302;TAL1_TCF{3,4,12}:1.28876377855;GLI1..3:1.28288948786;MYBL2:1.20604242995;SRF:1.17508046898;TFAP4:1.15399442332;GZF1:1.12626370186;TLX1..3_NFIC{dimer}:1.10919378774;EVI1:1.10119332009;GCM1,2:1.04944953104;IKZF1:1.03536596007;SPZ1:0.965493696202;NR3C1:0.957807193639;TEAD1:0.936012658881;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.931670032431;ATF6:0.899943335516;HBP1_HMGB_SSRP1_UBTF:0.896556404543;RXR{A,B,G}:0.890685199086;NKX2-2,8:0.875733280527;MAFB:0.866585230847;ZIC1..3:0.75156661182;KLF4:0.749992277246;ZNF423:0.743092185903;NANOG{mouse}:0.741948538653;HOX{A6,A7,B6,B7}:0.735413401456;TP53:0.724379078977;RXRA_VDR{dimer}:0.705356447319;HOX{A4,D4}:0.678362966812;FOXL1:0.676431574161;GTF2I:0.666073451606;LHX3,4:0.653180185763;HMGA1,2:0.651453010069;NKX3-2:0.630254550573;HIF1A:0.600147736131;GTF2A1,2:0.599821242452;MZF1:0.578744149217;EBF1:0.558480478138;EN1,2:0.549725702925;PAX4:0.546826504949;RREB1:0.530984057777;ZNF384:0.529225831148;TFCP2:0.528090616902;TBP:0.524283183727;NR6A1:0.520022891116;YY1:0.49686568559;PATZ1:0.442383656849;HAND1,2:0.433104976047;PAX5:0.426509293702;NFE2L1:0.421727310813;CDC5L:0.421174235394;SOX17:0.415886065547;DBP:0.413826313294;GATA4:0.408296431186;NFATC1..3:0.401249670487;SMAD1..7,9:0.397390623791;TFAP2B:0.364344044421;ZBTB6:0.357375606899;NFE2L2:0.334956807894;NFIX:0.332548497736;ZNF148:0.326906559739;HSF1,2:0.320329250789;POU5F1:0.299007010147;HLF:0.266119047273;TFAP2{A,C}:0.249558529508;STAT2,4,6:0.246404136803;NKX6-1,2:0.237746353927;AHR_ARNT_ARNT2:0.237568050292;POU1F1:0.227570048465;MAZ:0.225378015023;PAX8:0.215760274797;POU3F1..4:0.199018392599;PRDM1:0.19639450192;MYFfamily:0.182211532906;ALX1:0.178811176002;CEBPA,B_DDIT3:0.165163807814;GFI1:0.163721949057;FOXP3:0.146481064571;bHLH_family:0.119671283086;NR1H4:0.0804239178855;HIC1:0.0643249320201;REST:0.0200413416534;DMAP1_NCOR{1,2}_SMARC:0.0127580612948;NR5A1,2:-0.0349095823755;MED-1{core}:-0.0459780037842;BACH2:-0.0510711932892;TFDP1:-0.0614329259898;MTE{core}:-0.0731215923499;MEF2{A,B,C,D}:-0.0789672792969;TOPORS:-0.0797230870114;EGR1..3:-0.0798153665334;HNF1A:-0.0905235029574;ELK1,4_GABP{A,B1}:-0.0925986221574;FOS_FOS{B,L1}_JUN{B,D}:-0.103951576731;MTF1:-0.120403681787;FOXM1:-0.125916313485;FOXO1,3,4:-0.131994124509;HMX1:-0.147353715541;FOSL2:-0.155558082732;NRF1:-0.157188381848;RUNX1..3:-0.160583096438;XCPE1{core}:-0.164548022278;IRF1,2:-0.17062672782;TBX4,5:-0.180799788177;ZNF143:-0.192128001407;NKX2-3_NKX2-5:-0.196005798047;FOXA2:-0.196696043148;PPARG:-0.196977702294;ADNP_IRX_SIX_ZHX:-0.197766492202;ONECUT1,2:-0.207420819808;NHLH1,2:-0.220344262944;TLX2:-0.227324893574;LEF1_TCF7_TCF7L1,2:-0.241067121851;CREB1:-0.257243816651;PAX6:-0.258885796989;PRRX1,2:-0.266254337914;SOX5:-0.284349653102;RFX1:-0.291115479721;BPTF:-0.304717415935;SREBF1,2:-0.312746477704;STAT1,3:-0.315280667412;AR:-0.37384363517;NFE2:-0.378335473617;SPI1:-0.425447286473;HNF4A_NR2F1,2:-0.426367179219;HOXA9_MEIS1:-0.427380557944;PDX1:-0.440568341983;NFKB1_REL_RELA:-0.468860224745;CUX2:-0.471395020119;FOXD3:-0.479784899345;SOX{8,9,10}:-0.491147405764;ZBTB16:-0.494765886232;ATF5_CREB3:-0.506929402207;MYB:-0.508524749115;SPIB:-0.532548456255;PAX2:-0.534679591251;OCT4_SOX2{dimer}:-0.543475786607;PAX3,7:-0.548094636399;E2F1..5:-0.548496604004;TGIF1:-0.553374236282;AIRE:-0.558752500004;T:-0.562452378681;SP1:-0.562466919291;NFIL3:-0.563816256283;ATF4:-0.57027380465;CDX1,2,4:-0.581443542734;JUN:-0.583570686304;TEF:-0.593173726311;ARID5B:-0.598380547567;FOXP1:-0.605761785045;VSX1,2:-0.609372266349;ELF1,2,4:-0.610646268852;IRF7:-0.613751356865;EP300:-0.622301427773;LMO2:-0.623485096801;ZFP161:-0.636091971832;SOX2:-0.637702909381;NKX2-1,4:-0.647218570704;IKZF2:-0.658664304964;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.664187677137;ETS1,2:-0.669347384546;PITX1..3:-0.690083990334;NANOG:-0.707545239876;POU6F1:-0.708939419715;FOX{D1,D2}:-0.713433835168;STAT5{A,B}:-0.728114227527;BREu{core}:-0.73816844652;NFY{A,B,C}:-0.740217895024;GATA6:-0.774975130743;FOX{I1,J2}:-0.775964730104;ESRRA:-0.798268040034;SNAI1..3:-0.845425745355;FOXN1:-0.891083696648;POU2F1..3:-0.892644748197;RFX2..5_RFXANK_RFXAP:-0.904662014124;ATF2:-1.0053854055;FOXQ1:-1.02881888698;ZEB1:-1.06228507006;RORA:-1.06546499334;CRX:-1.08686455397;PBX1:-1.22866278479;FOX{F1,F2,J1}:-1.24352909454;RBPJ:-1.41948176011;MYOD1:-2.03161471682 | |top_motifs=ZNF238:1.74841134209;HES1:1.69713616627;ALX4:1.68869206936;GFI1B:1.58155922062;PAX1,9:1.51891656227;NKX3-1:1.4634183501;ESR1:1.4520293071;XBP1:1.37083115082;HOX{A5,B5}:1.34958607167;UFEwm:1.29085239302;TAL1_TCF{3,4,12}:1.28876377855;GLI1..3:1.28288948786;MYBL2:1.20604242995;SRF:1.17508046898;TFAP4:1.15399442332;GZF1:1.12626370186;TLX1..3_NFIC{dimer}:1.10919378774;EVI1:1.10119332009;GCM1,2:1.04944953104;IKZF1:1.03536596007;SPZ1:0.965493696202;NR3C1:0.957807193639;TEAD1:0.936012658881;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.931670032431;ATF6:0.899943335516;HBP1_HMGB_SSRP1_UBTF:0.896556404543;RXR{A,B,G}:0.890685199086;NKX2-2,8:0.875733280527;MAFB:0.866585230847;ZIC1..3:0.75156661182;KLF4:0.749992277246;ZNF423:0.743092185903;NANOG{mouse}:0.741948538653;HOX{A6,A7,B6,B7}:0.735413401456;TP53:0.724379078977;RXRA_VDR{dimer}:0.705356447319;HOX{A4,D4}:0.678362966812;FOXL1:0.676431574161;GTF2I:0.666073451606;LHX3,4:0.653180185763;HMGA1,2:0.651453010069;NKX3-2:0.630254550573;HIF1A:0.600147736131;GTF2A1,2:0.599821242452;MZF1:0.578744149217;EBF1:0.558480478138;EN1,2:0.549725702925;PAX4:0.546826504949;RREB1:0.530984057777;ZNF384:0.529225831148;TFCP2:0.528090616902;TBP:0.524283183727;NR6A1:0.520022891116;YY1:0.49686568559;PATZ1:0.442383656849;HAND1,2:0.433104976047;PAX5:0.426509293702;NFE2L1:0.421727310813;CDC5L:0.421174235394;SOX17:0.415886065547;DBP:0.413826313294;GATA4:0.408296431186;NFATC1..3:0.401249670487;SMAD1..7,9:0.397390623791;TFAP2B:0.364344044421;ZBTB6:0.357375606899;NFE2L2:0.334956807894;NFIX:0.332548497736;ZNF148:0.326906559739;HSF1,2:0.320329250789;POU5F1:0.299007010147;HLF:0.266119047273;TFAP2{A,C}:0.249558529508;STAT2,4,6:0.246404136803;NKX6-1,2:0.237746353927;AHR_ARNT_ARNT2:0.237568050292;POU1F1:0.227570048465;MAZ:0.225378015023;PAX8:0.215760274797;POU3F1..4:0.199018392599;PRDM1:0.19639450192;MYFfamily:0.182211532906;ALX1:0.178811176002;CEBPA,B_DDIT3:0.165163807814;GFI1:0.163721949057;FOXP3:0.146481064571;bHLH_family:0.119671283086;NR1H4:0.0804239178855;HIC1:0.0643249320201;REST:0.0200413416534;DMAP1_NCOR{1,2}_SMARC:0.0127580612948;NR5A1,2:-0.0349095823755;MED-1{core}:-0.0459780037842;BACH2:-0.0510711932892;TFDP1:-0.0614329259898;MTE{core}:-0.0731215923499;MEF2{A,B,C,D}:-0.0789672792969;TOPORS:-0.0797230870114;EGR1..3:-0.0798153665334;HNF1A:-0.0905235029574;ELK1,4_GABP{A,B1}:-0.0925986221574;FOS_FOS{B,L1}_JUN{B,D}:-0.103951576731;MTF1:-0.120403681787;FOXM1:-0.125916313485;FOXO1,3,4:-0.131994124509;HMX1:-0.147353715541;FOSL2:-0.155558082732;NRF1:-0.157188381848;RUNX1..3:-0.160583096438;XCPE1{core}:-0.164548022278;IRF1,2:-0.17062672782;TBX4,5:-0.180799788177;ZNF143:-0.192128001407;NKX2-3_NKX2-5:-0.196005798047;FOXA2:-0.196696043148;PPARG:-0.196977702294;ADNP_IRX_SIX_ZHX:-0.197766492202;ONECUT1,2:-0.207420819808;NHLH1,2:-0.220344262944;TLX2:-0.227324893574;LEF1_TCF7_TCF7L1,2:-0.241067121851;CREB1:-0.257243816651;PAX6:-0.258885796989;PRRX1,2:-0.266254337914;SOX5:-0.284349653102;RFX1:-0.291115479721;BPTF:-0.304717415935;SREBF1,2:-0.312746477704;STAT1,3:-0.315280667412;AR:-0.37384363517;NFE2:-0.378335473617;SPI1:-0.425447286473;HNF4A_NR2F1,2:-0.426367179219;HOXA9_MEIS1:-0.427380557944;PDX1:-0.440568341983;NFKB1_REL_RELA:-0.468860224745;CUX2:-0.471395020119;FOXD3:-0.479784899345;SOX{8,9,10}:-0.491147405764;ZBTB16:-0.494765886232;ATF5_CREB3:-0.506929402207;MYB:-0.508524749115;SPIB:-0.532548456255;PAX2:-0.534679591251;OCT4_SOX2{dimer}:-0.543475786607;PAX3,7:-0.548094636399;E2F1..5:-0.548496604004;TGIF1:-0.553374236282;AIRE:-0.558752500004;T:-0.562452378681;SP1:-0.562466919291;NFIL3:-0.563816256283;ATF4:-0.57027380465;CDX1,2,4:-0.581443542734;JUN:-0.583570686304;TEF:-0.593173726311;ARID5B:-0.598380547567;FOXP1:-0.605761785045;VSX1,2:-0.609372266349;ELF1,2,4:-0.610646268852;IRF7:-0.613751356865;EP300:-0.622301427773;LMO2:-0.623485096801;ZFP161:-0.636091971832;SOX2:-0.637702909381;NKX2-1,4:-0.647218570704;IKZF2:-0.658664304964;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.664187677137;ETS1,2:-0.669347384546;PITX1..3:-0.690083990334;NANOG:-0.707545239876;POU6F1:-0.708939419715;FOX{D1,D2}:-0.713433835168;STAT5{A,B}:-0.728114227527;BREu{core}:-0.73816844652;NFY{A,B,C}:-0.740217895024;GATA6:-0.774975130743;FOX{I1,J2}:-0.775964730104;ESRRA:-0.798268040034;SNAI1..3:-0.845425745355;FOXN1:-0.891083696648;POU2F1..3:-0.892644748197;RFX2..5_RFXANK_RFXAP:-0.904662014124;ATF2:-1.0053854055;FOXQ1:-1.02881888698;ZEB1:-1.06228507006;RORA:-1.06546499334;CRX:-1.08686455397;PBX1:-1.22866278479;FOX{F1,F2,J1}:-1.24352909454;RBPJ:-1.41948176011;MYOD1:-2.03161471682 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:13231-141I9;search_select_hide=table117:FF:13231-141I9 | |||
}} | }} | ||
Latest revision as of 18:54, 4 June 2020
| Name: | mesenchymal stem cells (adipose derived), adipogenic induction |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13421 |
| Sample type: | time courses |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13421
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13421
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.981 |
| 10 | 10 | 0.443 |
| 100 | 100 | 0.923 |
| 101 | 101 | 0.414 |
| 102 | 102 | 0.166 |
| 103 | 103 | 0.829 |
| 104 | 104 | 0.72 |
| 105 | 105 | 0.251 |
| 106 | 106 | 0.659 |
| 107 | 107 | 0.217 |
| 108 | 108 | 0.348 |
| 109 | 109 | 0.752 |
| 11 | 11 | 0.703 |
| 110 | 110 | 0.245 |
| 111 | 111 | 0.626 |
| 112 | 112 | 0.216 |
| 113 | 113 | 0.0149 |
| 114 | 114 | 0.258 |
| 115 | 115 | 0.0307 |
| 116 | 116 | 0.0713 |
| 117 | 117 | 0.884 |
| 118 | 118 | 0.295 |
| 119 | 119 | 0.871 |
| 12 | 12 | 0.882 |
| 120 | 120 | 0.727 |
| 121 | 121 | 0.701 |
| 122 | 122 | 0.0118 |
| 123 | 123 | 8.60855e-4 |
| 124 | 124 | 0.525 |
| 125 | 125 | 0.689 |
| 126 | 126 | 0.754 |
| 127 | 127 | 0.527 |
| 128 | 128 | 0.75 |
| 129 | 129 | 0.788 |
| 13 | 13 | 0.925 |
| 130 | 130 | 0.743 |
| 131 | 131 | 0.886 |
| 132 | 132 | 0.197 |
| 133 | 133 | 0.785 |
| 134 | 134 | 0.0202 |
| 135 | 135 | 0.557 |
| 136 | 136 | 0.55 |
| 137 | 137 | 0.409 |
| 138 | 138 | 0.293 |
| 139 | 139 | 0.916 |
| 14 | 14 | 0.22 |
| 140 | 140 | 0.722 |
| 141 | 141 | 0.234 |
| 142 | 142 | 0.646 |
| 143 | 143 | 0.789 |
| 144 | 144 | 0.319 |
| 145 | 145 | 0.95 |
| 146 | 146 | 0.819 |
| 147 | 147 | 0.158 |
| 148 | 148 | 0.477 |
| 149 | 149 | 0.0169 |
| 15 | 15 | 0.397 |
| 150 | 150 | 0.327 |
| 151 | 151 | 0.647 |
| 152 | 152 | 0.0925 |
| 153 | 153 | 0.0465 |
| 154 | 154 | 0.58 |
| 155 | 155 | 0.00351 |
| 156 | 156 | 0.552 |
| 157 | 157 | 0.579 |
| 158 | 158 | 0.00531 |
| 159 | 159 | 0.565 |
| 16 | 16 | 0.0842 |
| 160 | 160 | 0.425 |
| 161 | 161 | 0.956 |
| 162 | 162 | 0.232 |
| 163 | 163 | 0.741 |
| 164 | 164 | 0.159 |
| 165 | 165 | 0.781 |
| 166 | 166 | 0.134 |
| 167 | 167 | 0.803 |
| 168 | 168 | 0.735 |
| 169 | 169 | 0.0237 |
| 17 | 17 | 0.79 |
| 18 | 18 | 0.183 |
| 19 | 19 | 9.42091e-4 |
| 2 | 2 | 0.177 |
| 20 | 20 | 0.196 |
| 21 | 21 | 0.0151 |
| 22 | 22 | 0.317 |
| 23 | 23 | 0.759 |
| 24 | 24 | 0.172 |
| 25 | 25 | 0.152 |
| 26 | 26 | 0.142 |
| 27 | 27 | 0.682 |
| 28 | 28 | 0.108 |
| 29 | 29 | 0.617 |
| 3 | 3 | 0.821 |
| 30 | 30 | 0.265 |
| 31 | 31 | 0.732 |
| 32 | 32 | 2.38337e-13 |
| 33 | 33 | 0.794 |
| 34 | 34 | 0.837 |
| 35 | 35 | 0.668 |
| 36 | 36 | 0.0341 |
| 37 | 37 | 0.0418 |
| 38 | 38 | 0.446 |
| 39 | 39 | 0.267 |
| 4 | 4 | 0.569 |
| 40 | 40 | 0.0812 |
| 41 | 41 | 0.237 |
| 42 | 42 | 0.453 |
| 43 | 43 | 0.873 |
| 44 | 44 | 0.263 |
| 45 | 45 | 0.765 |
| 46 | 46 | 0.524 |
| 47 | 47 | 0.695 |
| 48 | 48 | 0.927 |
| 49 | 49 | 0.62 |
| 5 | 5 | 0.876 |
| 50 | 50 | 0.67 |
| 51 | 51 | 0.847 |
| 52 | 52 | 0.739 |
| 53 | 53 | 0.175 |
| 54 | 54 | 0.677 |
| 55 | 55 | 0.123 |
| 56 | 56 | 0.981 |
| 57 | 57 | 0.671 |
| 58 | 58 | 0.128 |
| 59 | 59 | 0.141 |
| 6 | 6 | 0.359 |
| 60 | 60 | 0.964 |
| 61 | 61 | 0.842 |
| 62 | 62 | 0.525 |
| 63 | 63 | 0.563 |
| 64 | 64 | 0.986 |
| 65 | 65 | 0.538 |
| 66 | 66 | 0.238 |
| 67 | 67 | 0.578 |
| 68 | 68 | 0.418 |
| 69 | 69 | 0.418 |
| 7 | 7 | 0.293 |
| 70 | 70 | 0.64 |
| 71 | 71 | 0.368 |
| 72 | 72 | 0.988 |
| 73 | 73 | 0.0351 |
| 74 | 74 | 0.274 |
| 75 | 75 | 0.808 |
| 76 | 76 | 0.352 |
| 77 | 77 | 0.0431 |
| 78 | 78 | 0.377 |
| 79 | 79 | 0.00977 |
| 8 | 8 | 0.273 |
| 80 | 80 | 0.701 |
| 81 | 81 | 0.591 |
| 82 | 82 | 0.429 |
| 83 | 83 | 0.517 |
| 84 | 84 | 0.658 |
| 85 | 85 | 0.218 |
| 86 | 86 | 0.38 |
| 87 | 87 | 0.18 |
| 88 | 88 | 0.533 |
| 89 | 89 | 0.194 |
| 9 | 9 | 0.522 |
| 90 | 90 | 0.838 |
| 91 | 91 | 0.795 |
| 92 | 92 | 0.328 |
| 93 | 93 | 0.209 |
| 94 | 94 | 0.864 |
| 95 | 95 | 0.587 |
| 96 | 96 | 0.808 |
| 97 | 97 | 0.724 |
| 98 | 98 | 0.927 |
| 99 | 99 | 0.00912 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13421
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000690 human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002570 (mesenchymal stem cell of adipose)
UBERON: Anatomy
0001013 (adipose tissue)
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000350 (experimentally modified sample)
0000344 (0 minute sample)
0000329 (adipogenic induction sample)
0000096 (human mesenchymal stem cell of adipose sample)
0000690 (human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
