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FFCP PHASE1:Mm9::chr9:40183944..40184000,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=235283
|EntrezGene=235283
|HGNC=
|HGNC=
|MCL_coexpression_id=694
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000149492_5end
|association_with_transcript=0bp_to_ENSMUST00000149492_5end
|cluster_id=chr9:40183944..40184000,-
|description=CAGE_peak_4_at_Gramd1b_5end
|description=CAGE_peak_4_at_Gramd1b_5end
|id=chr9:40183944..40184000,-
|id=chr9:40183944..40184000,-
|ontology_enrichment_celltype=CL:0000117!1.25e-09!23;CL:0000337!1.25e-09!23;CL:0000221!9.01e-07!44;CL:0000133!9.01e-07!44
|ontology_enrichment_celltype=CL:0000117!1.25e-09!23;CL:0000337!1.25e-09!23;CL:0000221!9.01e-07!44;CL:0000133!9.01e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,3.70e-07,23;CL:0000337,3.70e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.34e-26!63;UBERON:0002346!2.49e-22!71;UBERON:0003075!2.49e-22!71;UBERON:0007284!2.49e-22!71;UBERON:0004121!3.24e-22!102;UBERON:0000924!3.24e-22!102;UBERON:0006601!3.24e-22!102;UBERON:0001049!1.78e-21!52;UBERON:0005068!1.78e-21!52;UBERON:0006241!1.78e-21!52;UBERON:0007135!1.78e-21!52;UBERON:0000955!6.23e-21!50;UBERON:0006238!6.23e-21!50;UBERON:0000073!8.94e-21!75;UBERON:0001016!8.94e-21!75;UBERON:0001017!1.32e-20!73;UBERON:0005743!1.32e-20!73;UBERON:0002616!3.23e-20!49;UBERON:0003056!3.44e-20!49;UBERON:0002020!1.37e-17!34;UBERON:0007811!4.77e-17!86;UBERON:0003080!4.88e-15!40;UBERON:0002791!1.08e-14!29;UBERON:0003528!1.08e-14!29;UBERON:0001893!1.08e-14!29;UBERON:0002780!2.37e-14!39;UBERON:0001890!2.37e-14!39;UBERON:0006240!2.37e-14!39;UBERON:0000153!1.47e-13!94;UBERON:0002619!8.69e-11!17;UBERON:0000956!1.49e-10!21;UBERON:0001869!1.49e-10!21;UBERON:0000203!1.49e-10!21;UBERON:0002021!5.38e-09!10;UBERON:0000411!5.38e-09!10;UBERON:0001950!5.38e-09!10;UBERON:0003076!3.06e-07!12;UBERON:0003057!3.06e-07!12;UBERON:0000489!7.65e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.33e-33,64;UBERON:0003075,2.33e-33,64;UBERON:0007284,2.33e-33,64;UBERON:0000073,1.86e-31,54;UBERON:0004121,1.04e-28,95;UBERON:0000924,1.04e-28,95;UBERON:0006601,1.04e-28,95;UBERON:0001049,2.84e-28,52;UBERON:0005068,2.84e-28,52;UBERON:0006241,2.84e-28,52;UBERON:0007135,2.84e-28,52;UBERON:0001017,5.91e-28,73;UBERON:0010371,7.38e-28,73;UBERON:0001016,6.56e-27,75;UBERON:0000955,6.33e-23,47;UBERON:0006238,6.33e-23,47;UBERON:0003056,7.40e-23,49;UBERON:0002616,1.01e-21,46;UBERON:0002020,1.67e-21,34;UBERON:0010314,8.42e-20,92;UBERON:0002619,1.97e-16,17;UBERON:0002021,2.13e-16,10;UBERON:0000411,2.13e-16,10;UBERON:0001950,2.13e-16,10;UBERON:0003080,2.20e-16,40;UBERON:0003528,2.81e-16,29;UBERON:0002791,2.81e-16,29;UBERON:0001893,2.81e-16,29;UBERON:0002780,2.97e-15,39;UBERON:0001890,2.97e-15,39;UBERON:0006240,2.97e-15,39;UBERON:0000956,9.13e-15,21;UBERON:0001869,9.13e-15,21;UBERON:0000203,9.13e-15,21;UBERON:0003076,1.43e-13,12;UBERON:0003057,1.43e-13,12;UBERON:0004111,2.16e-10,122;UBERON:0000025,4.46e-10,114;UBERON:0002240,3.92e-08,6;UBERON:0005174,3.92e-08,6;UBERON:0001137,3.92e-08,6;UBERON:0007023,7.45e-08,51;UBERON:0000970,1.32e-07,9;UBERON:0000019,1.32e-07,9;UBERON:0000047,1.32e-07,9;UBERON:0010312,1.32e-07,9;UBERON:0004088,1.32e-07,9;UBERON:0002104,1.32e-07,9;UBERON:0001456,1.32e-07,9;UBERON:0003072,1.32e-07,9;UBERON:0004128,1.32e-07,9;UBERON:0003071,1.32e-07,9;UBERON:0000483,3.42e-07,174;UBERON:0000119,5.46e-07,176;UBERON:0004733,5.58e-07,6;UBERON:0004732,5.58e-07,6;UBERON:0002028,5.58e-07,6;UBERON:0007277,5.58e-07,6;UBERON:0002950,6.99e-07,4;UBERON:0001891,6.99e-07,4;UBERON:0009616,6.99e-07,4;UBERON:0010286,6.99e-07,4;UBERON:0001948,7.47e-07,5;UBERON:0002315,7.47e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,1.5378032791413,2.52758868796568,1.1198913730029,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,1.92109152660777,0,0.270011876663381,0.210324961351382,6.28432165688368,2.87129103237098,0.857435594504678,0.766763768145891,0,36.3382407297983,21.7068474744819,28.1099955858926,0.923204014111357,0.548925861614458,0.52091337055676,20.6595419261022,6.75315132038016,10.6958773443767,2.06240009831567,2.42031857358475,1.3047961207771,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0,0,0,0,0.352766121407114,0.251333182659351,0,0,0,0.161766849947409,0.662524555381181,0,1.86391761218122,45.3810235367898,47.9632958602812,0,0,0,0,17.8250860891739,10.980014467647,0.628271760564322,22.2495129846114,24.8043993610421,23.6878370797899,13.9527486238272,0,1.61729061793121,3.0326731012041,47.1389757185702,0.260240885925407,0.919608417733892,1.26043490863744,1.80845781402858,2.58538696775046,4.61209393025459,3.37326208415024,73.4717572898804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3466752678997,1.64647379806855,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0.398282546508734,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0.387904974335251,0.140271639780637,0.316182685621286,0.295220295959204,0.156998727841375,0.246794327843601,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,17.6605648986571,16.4096361229084,0,0.252470927204373,0,0,0,0,0,0,0,0,0,14.7807805554031,0.425820255624806,0.35613120733451,0.81443479676788,3.79431282836832,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0.316036757935816,0,0,6.12791290356818,0,0,0,0,0.713475270408282,0.493647061806363,0.304464949114599,0,0,10.5853631066382,0,0,0.120625849856312,0,0.164140899745061,0.291480836629851,13.5360470467672,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,1.16653475962614,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0.576060012515731,0.316011120628178,0.405450430580328,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0,1.83151624267265,0,12.0377304968487,19.2015626489803,22.0956113523445,20.6242384838183,25.9498305338968,17.8121455140367,20.3956352295219,25.6508550088086,21.1650965515384,18.1256963593682,19.6748918465692,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.448176066834085,0.114870937911227,1.42888107384922,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.715308569841963,0.436039249896986,0.376437521661322,0.338458431566706,0.548783918618318,0,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0.661774257358546,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,1.5378032791413,2.52758868796568,1.1198913730029,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,1.92109152660777,0,0.270011876663381,0.210324961351382,6.28432165688368,2.87129103237098,0.857435594504678,0.766763768145891,0,36.3382407297983,21.7068474744819,28.1099955858926,0.923204014111357,0.548925861614458,0.52091337055676,20.6595419261022,6.75315132038016,10.6958773443767,2.06240009831567,2.42031857358475,1.3047961207771,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0,0,0,0,0.352766121407114,0.251333182659351,0,0,0,0.161766849947409,0.662524555381181,0,1.86391761218122,45.3810235367898,47.9632958602812,0,0,0,0,17.8250860891739,10.980014467647,0.628271760564322,22.2495129846114,24.8043993610421,23.6878370797899,13.9527486238272,0,1.61729061793121,3.0326731012041,47.1389757185702,0.260240885925407,0.919608417733892,1.26043490863744,1.80845781402858,2.58538696775046,4.61209393025459,3.37326208415024,73.4717572898804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3466752678997,1.64647379806855,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0.398282546508734,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0.387904974335251,0.140271639780637,0.316182685621286,0.295220295959204,0.156998727841375,0.246794327843601,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,17.6605648986571,16.4096361229084,0,0.252470927204373,0,0,0,0,0,0,0,0,0,14.7807805554031,0.425820255624806,0.35613120733451,0.81443479676788,3.79431282836832,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0.316036757935816,0,0,6.12791290356818,0,0,0,0,0.713475270408282,0.493647061806363,0.304464949114599,0,0,10.5853631066382,0,0,0.120625849856312,0,0.164140899745061,0.291480836629851,13.5360470467672,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,1.16653475962614,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0.576060012515731,0.316011120628178,0.405450430580328,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0,1.83151624267265,0,12.0377304968487,19.2015626489803,22.0956113523445,20.6242384838183,25.9498305338968,17.8121455140367,20.3956352295219,25.6508550088086,21.1650965515384,18.1256963593682,19.6748918465692,0,0,0,0.243106717068294,0.419226325255965,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.468207537349412,0.448176066834085,0.114870937911227,1.42888107384922,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.715308569841963,0.436039249896986,0.376437521661322,0.338458431566706,0.548783918618318,0,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0.661774257358546,0.231867835620421
|short_description=p4@Gramd1b
|short_description=p4@Gramd1b
}}
}}

Latest revision as of 15:10, 26 September 2015

Short description:p4@Gramd1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gramd1b_5end
Coexpression cluster:MCL_coexpression_mm9:694
Association with transcript: 0bp_to_ENSMUST00000149492_5end
EntrezGene:Gramd1b
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p4@Gramd1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B245.38
cerebellum, neonate N30.CNhs11135.1395-42I247.96
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.83
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D522.25
cortex, neonate N30.CNhs11107.1392-42F224.80
diencephalon, adult.CNhs10482.20-12F223.69
diencephalon, neonate N30.CNhs11201.1388-42B213.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G447.14
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A273.47
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C217.66
medulla oblongata, neonate N30.CNhs11200.1396-42A316.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I914.78
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F810.59
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.70e-0723
neuroblast (sensu Vertebrata)3.70e-0723

Uber anatomy
Ontology termp-valuen
neurectoderm2.33e-3364
neural plate2.33e-3364
presumptive neural plate2.33e-3364
regional part of nervous system1.86e-3154
ectoderm-derived structure1.04e-2895
ectoderm1.04e-2895
presumptive ectoderm1.04e-2895
neural tube2.84e-2852
neural rod2.84e-2852
future spinal cord2.84e-2852
neural keel2.84e-2852
central nervous system5.91e-2873
ecto-epithelium7.38e-2873
nervous system6.56e-2775
brain6.33e-2347
future brain6.33e-2347
pre-chordal neural plate7.40e-2349
regional part of brain1.01e-2146
gray matter1.67e-2134
structure with developmental contribution from neural crest8.42e-2092
regional part of cerebral cortex1.97e-1617
occipital lobe2.13e-1610
visual cortex2.13e-1610
neocortex2.13e-1610
anterior neural tube2.20e-1640
brain grey matter2.81e-1629
regional part of telencephalon2.81e-1629
telencephalon2.81e-1629
regional part of forebrain2.97e-1539
forebrain2.97e-1539
future forebrain2.97e-1539
cerebral cortex9.13e-1521
cerebral hemisphere9.13e-1521
pallium9.13e-1521
posterior neural tube1.43e-1312
chordal neural plate1.43e-1312
anatomical conduit2.16e-10122
tube4.46e-10114
spinal cord3.92e-086
dorsal region element3.92e-086
dorsum3.92e-086
adult organism7.45e-0851
eye1.32e-079
camera-type eye1.32e-079
simple eye1.32e-079
immature eye1.32e-079
ocular region1.32e-079
visual system1.32e-079
face1.32e-079
optic cup1.32e-079
optic vesicle1.32e-079
eye primordium1.32e-079
epithelium3.42e-07174
cell layer5.46e-07176
segmental subdivision of hindbrain5.58e-076
segmental subdivision of nervous system5.58e-076
hindbrain5.58e-076
presumptive hindbrain5.58e-076
regional part of midbrain6.99e-074
midbrain6.99e-074
presumptive midbrain6.99e-074
midbrain neural tube6.99e-074
regional part of spinal cord7.47e-075
gray matter of spinal cord7.47e-075