FFCP PHASE1:Hg19::chr13:41556186..41556208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1997 | |EntrezGene=1997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3316 | |HGNC=3316 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=169bp_to_ENST00000498824_5end | |association_with_transcript=169bp_to_ENST00000498824_5end | ||
|cluster_id=chr13:41556186..41556208,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_12_at_ELF1_5end | |description=CAGE_peak_12_at_ELF1_5end | ||
|id=chr13:41556186..41556208,- | |id=chr13:41556186..41556208,- | ||
|ontology_enrichment_celltype=CL:0000037!7.07e-33!172;CL:0000566!7.07e-33!172;CL:0000738!6.43e-32!140;CL:0002032!8.06e-32!165;CL:0000837!8.06e-32!165;CL:0000988!5.85e-30!182;CL:0002031!2.73e-27!124;CL:0002087!1.23e-26!119;CL:0000766!9.35e-23!76;CL:0000763!3.07e-22!112;CL:0000049!3.07e-22!112;CL:0002057!4.08e-22!42;CL:0000860!3.65e-20!45;CL:0000839!1.45e-19!70;CL:0000557!7.51e-19!71;CL:0002194!2.01e-17!63;CL:0000576!2.01e-17!63;CL:0000040!2.01e-17!63;CL:0000559!2.01e-17!63;CL:0002009!3.45e-17!65;CL:0000134!5.06e-10!358;CL:0002320!3.73e-09!365;CL:0000542!6.74e-09!53;CL:0000051!6.74e-09!53;CL:0000838!1.80e-08!52;CL:0000219!6.65e-07!390 | |ontology_enrichment_celltype=CL:0000037!7.07e-33!172;CL:0000566!7.07e-33!172;CL:0000738!6.43e-32!140;CL:0002032!8.06e-32!165;CL:0000837!8.06e-32!165;CL:0000988!5.85e-30!182;CL:0002031!2.73e-27!124;CL:0002087!1.23e-26!119;CL:0000766!9.35e-23!76;CL:0000763!3.07e-22!112;CL:0000049!3.07e-22!112;CL:0002057!4.08e-22!42;CL:0000860!3.65e-20!45;CL:0000839!1.45e-19!70;CL:0000557!7.51e-19!71;CL:0002194!2.01e-17!63;CL:0000576!2.01e-17!63;CL:0000040!2.01e-17!63;CL:0000559!2.01e-17!63;CL:0002009!3.45e-17!65;CL:0000134!5.06e-10!358;CL:0002320!3.73e-09!365;CL:0000542!6.74e-09!53;CL:0000051!6.74e-09!53;CL:0000838!1.80e-08!52;CL:0000219!6.65e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.06e-39;33!CL:0002057;6.06e-39;33!CL:0000473;4.00e-27;39!CL:0000234;4.00e-27;39!CL:0000576;1.35e-23;48!CL:0000766;1.55e-18;69!CL:0000763;7.94e-11;100!CL:0002087;1.20e-10;104!CL:0000738;1.15e-09;136!CL:0000988;8.25e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.37e-40,42;CL:0002057,4.37e-40,42;CL:0000766,2.33e-37,72;CL:0000473,4.39e-36,48;CL:0000234,4.39e-36,48;CL:0000738,3.68e-35,136;CL:0000557,2.11e-32,67;CL:0000037,6.71e-32,168;CL:0002032,1.82e-31,161;CL:0000837,1.82e-31,161;CL:0000839,3.32e-31,66;CL:0000988,2.57e-30,177;CL:0000763,1.79e-29,108;CL:0000049,1.79e-29,108;CL:0002031,1.98e-29,120;CL:0002009,9.80e-29,61;CL:0002087,1.51e-28,115;CL:0002194,3.28e-28,59;CL:0000576,3.28e-28,59;CL:0000040,3.28e-28,59;CL:0000559,3.28e-28,59;CL:0000134,7.06e-09,354;CL:0002320,2.31e-08,361;CL:0000219,5.59e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-29;42!CL:0000049;2.29e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-19!102;UBERON:0003061!1.31e-19!102;UBERON:0002193!5.91e-17!112;UBERON:0002371!3.70e-16!80;UBERON:0001474!3.04e-15!86;UBERON:0002405!1.40e-11!115;UBERON:0004765!3.04e-11!101;UBERON:0001434!3.04e-11!101;UBERON:0002384!1.27e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-30,98;UBERON:0003061,1.17e-30,98;UBERON:0002193,8.16e-28,108;UBERON:0002371,4.12e-27,76;UBERON:0001474,3.06e-24,82;UBERON:0002405,1.19e-23,93;UBERON:0004765,5.08e-21,90;UBERON:0001434,9.60e-18,100;UBERON:0003081,1.07e-10,203;UBERON:0002384,4.42e-08,371;UBERON:0002204,5.88e-07,167 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.60468152070698,0.328402357799783,0.708397031823113,0.786728553697808,1.91914699048606,0.928896739896456,0,0.6024118375565,0.739508020333575,0.774672005803016,0.426507697462265,0.880801318004542,1.10799081706375,1.00272223735071,1.30206522429511,0.447830948479849,0.647787332037959,0.257575567634187,2.18097358169347,1.51150377475524,1.21292030593908,4.64858073811369,1.23350366406548,3.71647645074124,3.16461631554365,3.07392847834921,4.02019790810595,3.44745680736619,5.80936215225443,2.70852973188684,3.01187743268168,1.91034305040492,3.14612878223118,4.59125838556354,2.24650318953266,1.91801137739712,0.329851300186716,1.59570926097305,2.13112375266347,3.19230162491442,1.70215567407342,2.4912889959823,5.27622197039161,4.17186334736161,2.38907729175628,3.02699751316684,2.20966581592539,2.21523671208619,1.26753171787165,0.212604299965044,0.628975936525128,0.44931452458598,0.901061357049038,0.48217676009124,0.570025487482497,0.79566670879636,0.730656615058536,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0.574752439954483,1.98313461835459,0,3.41527781465669,2.93618594685469,3.82273228125229,0,0,0.263384084775077,1.180258620683,3.53709686474248,3.08402248499264,0.668745981562712,0.977766799900771,2.36723902867367,1.94826728407911,0.779873198196215,0.589211814949674,1.32920336750173,1.62482318259009,1.0247305578054,0.650296737799391,0.822189523018381,0.829050053357545,0.579606171470105,1.18629250529648,0.802622484269139,1.04535523804977,0.453237370790265,1.14966148080576,1.03088233644789,1.01207876807801,0.637130828648193,0,0.950452044448374,0.301150238155546,0.383959833463255,0,0.947109008176067,0.821127996921047,0.201606743224732,2.94184215361858,2.46201486600758,0,1.34140171940727,0,0,0.50133791063589,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.263504357079378,0,0,0,0,0.696518949197069,0.26591592103773,0.953962497221368,0,0.371457501329565,0,0.860234595106124,0,0,0,0.825354125820202,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.337834441449967,0,0,0.549605231791222,0,3.87780264148325,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0.354668382198357,0,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.309977343527296,0,0.741800787835671,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.397589304964456,0,0.207322110030741,0,0.36497735907583,0,0,0,1.85747171212792,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0.402115889646523,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0.380508304469197,0.790204397959275,1.71697232418975,0.984868024349589,0.468008530278475,0.148631162288728,0,0.503946384596579,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,1.97065295158377,0.704387472105808,2.28060927094849,1.8735593944205,1.38866676769018,0.190493682876507,0.763976851116555,1.17217447210047,0,0.514137463516618,0,0.571652865261156,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0.791951872933429,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0.784596007954691,0.788123040807709,1.72502059887614,0.77005821767849,0,0,0,0,0,5.99205619157746,14.9580729602012,1.24324654030811,0.12269149171914,0,0.271265023699736,0.415941723061614,1.07057393278297,0.315404830067869,0.585707074963566,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,2.5885704098234,1.49418580924822,0.303127571446259,0,0.30239029332968,0,0,0,0,0.511707249066704,0.64341568457443,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0.362578348774867,1.20303882181971,0.920809889358963,0.229628896329213,0.364182336013434,0.393373244878272,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0.640986253728404,0.330037999682352,0,1.95018073810956,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.255679882248303,0.0890320356467374,0.165284915360978,1.34533047155574,0.382838137483752,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0.487426979262569,0,0.136499911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|phase1_expression=0.181678379270557,0.856402095563933,0,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.60468152070698,0.328402357799783,0.708397031823113,0.786728553697808,1.91914699048606,0.928896739896456,0,0.6024118375565,0.739508020333575,0.774672005803016,0.426507697462265,0.880801318004542,1.10799081706375,1.00272223735071,1.30206522429511,0.447830948479849,0.647787332037959,0.257575567634187,2.18097358169347,1.51150377475524,1.21292030593908,4.64858073811369,1.23350366406548,3.71647645074124,3.16461631554365,3.07392847834921,4.02019790810595,3.44745680736619,5.80936215225443,2.70852973188684,3.01187743268168,1.91034305040492,3.14612878223118,4.59125838556354,2.24650318953266,1.91801137739712,0.329851300186716,1.59570926097305,2.13112375266347,3.19230162491442,1.70215567407342,2.4912889959823,5.27622197039161,4.17186334736161,2.38907729175628,3.02699751316684,2.20966581592539,2.21523671208619,1.26753171787165,0.212604299965044,0.628975936525128,0.44931452458598,0.901061357049038,0.48217676009124,0.570025487482497,0.79566670879636,0.730656615058536,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0.574752439954483,1.98313461835459,0,3.41527781465669,2.93618594685469,3.82273228125229,0,0,0.263384084775077,1.180258620683,3.53709686474248,3.08402248499264,0.668745981562712,0.977766799900771,2.36723902867367,1.94826728407911,0.779873198196215,0.589211814949674,1.32920336750173,1.62482318259009,1.0247305578054,0.650296737799391,0.822189523018381,0.829050053357545,0.579606171470105,1.18629250529648,0.802622484269139,1.04535523804977,0.453237370790265,1.14966148080576,1.03088233644789,1.01207876807801,0.637130828648193,0,0.950452044448374,0.301150238155546,0.383959833463255,0,0.947109008176067,0.821127996921047,0.201606743224732,2.94184215361858,2.46201486600758,0,1.34140171940727,0,0,0.50133791063589,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.263504357079378,0,0,0,0,0.696518949197069,0.26591592103773,0.953962497221368,0,0.371457501329565,0,0.860234595106124,0,0,0,0.825354125820202,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.337834441449967,0,0,0.549605231791222,0,3.87780264148325,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0.354668382198357,0,0,0.74000264525148,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.309977343527296,0,0.741800787835671,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.397589304964456,0,0.207322110030741,0,0.36497735907583,0,0,0,1.85747171212792,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0.171567810298526,0.109750285408626,0,0.402115889646523,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.462985512576611,0.380508304469197,0.790204397959275,1.71697232418975,0.984868024349589,0.468008530278475,0.148631162288728,0,0.503946384596579,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,1.97065295158377,0.704387472105808,2.28060927094849,1.8735593944205,1.38866676769018,0.190493682876507,0.763976851116555,1.17217447210047,0,0.514137463516618,0,0.571652865261156,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0.791951872933429,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.358121926479791,0.784596007954691,0.788123040807709,1.72502059887614,0.77005821767849,0,0,0,0,0,5.99205619157746,14.9580729602012,1.24324654030811,0.12269149171914,0,0.271265023699736,0.415941723061614,1.07057393278297,0.315404830067869,0.585707074963566,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,2.5885704098234,1.49418580924822,0.303127571446259,0,0.30239029332968,0,0,0,0,0.511707249066704,0.64341568457443,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0,0.362578348774867,1.20303882181971,0.920809889358963,0.229628896329213,0.364182336013434,0.393373244878272,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0.640986253728404,0.330037999682352,0,1.95018073810956,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.255679882248303,0.0890320356467374,0.165284915360978,1.34533047155574,0.382838137483752,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0.487426979262569,0,0.136499911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| ||
|short_description=p12@ELF1 | |short_description=p12@ELF1 | ||
}} | }} |
Latest revision as of 08:26, 17 September 2015
Short description: | p12@ELF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ELF1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 169bp_to_ENST00000498824_5end |
EntrezGene: | ELF1 |
HGNC: | 3316 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.37e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.37e-40 | 42 |
myeloid leukocyte | 2.33e-37 | 72 |
defensive cell | 4.39e-36 | 48 |
phagocyte | 4.39e-36 | 48 |
leukocyte | 3.68e-35 | 136 |
granulocyte monocyte progenitor cell | 2.11e-32 | 67 |
hematopoietic stem cell | 6.71e-32 | 168 |
hematopoietic oligopotent progenitor cell | 1.82e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-31 | 161 |
myeloid lineage restricted progenitor cell | 3.32e-31 | 66 |
hematopoietic cell | 2.57e-30 | 177 |
myeloid cell | 1.79e-29 | 108 |
common myeloid progenitor | 1.79e-29 | 108 |
hematopoietic lineage restricted progenitor cell | 1.98e-29 | 120 |
macrophage dendritic cell progenitor | 9.80e-29 | 61 |
nongranular leukocyte | 1.51e-28 | 115 |
monopoietic cell | 3.28e-28 | 59 |
monocyte | 3.28e-28 | 59 |
monoblast | 3.28e-28 | 59 |
promonocyte | 3.28e-28 | 59 |
mesenchymal cell | 7.06e-09 | 354 |
connective tissue cell | 2.31e-08 | 361 |
motile cell | 5.59e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-30 | 98 |
blood island | 1.17e-30 | 98 |
hemolymphoid system | 8.16e-28 | 108 |
bone marrow | 4.12e-27 | 76 |
bone element | 3.06e-24 | 82 |
immune system | 1.19e-23 | 93 |
skeletal element | 5.08e-21 | 90 |
skeletal system | 9.60e-18 | 100 |
lateral plate mesoderm | 1.07e-10 | 203 |
connective tissue | 4.42e-08 | 371 |
musculoskeletal system | 5.88e-07 | 167 |