FFCP PHASE1:Hg19::chr13:80055403..80055426,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54602 | |EntrezGene=54602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18537 | |HGNC=18537 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-161bp_to_ENST00000487865_5end | |association_with_transcript=-161bp_to_ENST00000487865_5end | ||
|cluster_id=chr13:80055403..80055426,+ | |||
|coexpression_cluster_id=C2272 | |||
|description=CAGE_peak_1_at_NDFIP2_5end | |description=CAGE_peak_1_at_NDFIP2_5end | ||
|id=chr13:80055403..80055426,+ | |id=chr13:80055403..80055426,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.84e-16!43;CL:0000223!7.46e-14!59;CL:0000066!5.01e-13!254;CL:0002251!1.16e-11!21;CL:0002159!8.62e-07!13 | |ontology_enrichment_celltype=CL:0002076!4.84e-16!43;CL:0000223!7.46e-14!59;CL:0000066!5.01e-13!254;CL:0002251!1.16e-11!21;CL:0002159!8.62e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.90e-12;42!CL:0002251;1.71e-11;20!CL:0002159;5.65e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.82e-16,42;CL:0000223,1.25e-13,58;CL:0000066,5.41e-13,253;CL:0002251,1.69e-11,20;CL:0002159,5.38e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;2.16e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!2.94e-08!143;DOID:305!3.54e-08!106;DOID:120!7.00e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:120;7.27e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.89e-08,143;DOID:305,3.48e-08,106;DOID:120,6.90e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000481!6.15e-19!347;UBERON:0000475!6.44e-18!365;UBERON:0004119!1.78e-16!169;UBERON:0000925!1.78e-16!169;UBERON:0006595!1.78e-16!169;UBERON:0000064!2.63e-16!219;UBERON:0000062!9.41e-15!511;UBERON:0001007!3.94e-13!155;UBERON:0001555!3.94e-13!155;UBERON:0007026!3.94e-13!155;UBERON:0004121!1.45e-12!169;UBERON:0004921!3.93e-12!129;UBERON:0004185!3.93e-12!129;UBERON:0000924!4.54e-12!173;UBERON:0006601!4.54e-12!173;UBERON:0000467!2.90e-11!625;UBERON:0000480!3.85e-11!626;UBERON:0000468!5.73e-11!659;UBERON:0001893!9.27e-11!34;UBERON:0002780!2.27e-10!41;UBERON:0001890!2.27e-10!41;UBERON:0006240!2.27e-10!41;UBERON:0001869!2.29e-10!32;UBERON:0002791!3.10e-10!33;UBERON:0000483!3.72e-10!309;UBERON:0002020!5.64e-10!34;UBERON:0003528!5.64e-10!34;UBERON:0003080!7.77e-10!42;UBERON:0000033!8.25e-10!123;UBERON:0000119!1.06e-09!312;UBERON:0000077!1.91e-09!130;UBERON:0000153!2.60e-09!129;UBERON:0007811!2.60e-09!129;UBERON:0002619!8.17e-09!22;UBERON:0003104!8.90e-09!238;UBERON:0009142!8.90e-09!238;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0002616!1.70e-08!59;UBERON:0000923!3.44e-08!604;UBERON:0005291!3.44e-08!604;UBERON:0006598!3.44e-08!604;UBERON:0002532!3.44e-08!604;UBERON:0002050!3.72e-08!605;UBERON:0005423!3.72e-08!605;UBERON:0001950!5.52e-08!20;UBERON:0004923!7.92e-08!57;UBERON:0000477!8.28e-08!286;UBERON:0003102!9.97e-08!95;UBERON:0004111!1.51e-07!241;UBERON:0000956!1.84e-07!25;UBERON:0000203!1.84e-07!25;UBERON:0000922!1.95e-07!612;UBERON:0000955!2.25e-07!69;UBERON:0006238!2.25e-07!69;UBERON:0000344!3.42e-07!12;UBERON:0005631!5.69e-07!14;UBERON:0000158!5.69e-07!14;UBERON:0000161!5.72e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.46e-09;34!UBERON:0001869;1.81e-09;32!UBERON:0002791;3.06e-09;32!UBERON:0002619;7.28e-09;22!UBERON:0003528;9.33e-09;34!UBERON:0002020;9.33e-09;34!UBERON:0001950;4.95e-08;20!UBERON:0002780;7.97e-08;41!UBERON:0001890;7.97e-08;41!UBERON:0004921;1.31e-07;33!UBERON:0000956;1.71e-07;25!UBERON:0000203;1.71e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.11e-18,223;UBERON:0004119,7.04e-15,160;UBERON:0000925,7.04e-15,160;UBERON:0006595,7.04e-15,160;UBERON:0004121,2.31e-12,171;UBERON:0000924,2.31e-12,171;UBERON:0006601,2.31e-12,171;UBERON:0001007,1.10e-11,145;UBERON:0001555,1.10e-11,145;UBERON:0007026,1.10e-11,145;UBERON:0004921,8.71e-11,118;UBERON:0001893,9.05e-11,34;UBERON:0010371,1.50e-10,104;UBERON:0000483,1.84e-10,306;UBERON:0002780,2.21e-10,41;UBERON:0001890,2.21e-10,41;UBERON:0003080,2.21e-10,41;UBERON:0006240,2.21e-10,41;UBERON:0001869,2.24e-10,32;UBERON:0002791,4.30e-10,32;UBERON:0000119,5.35e-10,309;UBERON:0003528,5.52e-10,34;UBERON:0002020,5.52e-10,34;UBERON:0000073,3.48e-09,53;UBERON:0002616,3.48e-09,53;UBERON:0001049,3.95e-09,56;UBERON:0005068,3.95e-09,56;UBERON:0006241,3.95e-09,56;UBERON:0007135,3.95e-09,56;UBERON:0003102,4.54e-09,99;UBERON:0002619,8.01e-09,22;UBERON:0004923,3.55e-08,66;UBERON:0001950,5.43e-08,20;UBERON:0000955,1.03e-07,68;UBERON:0006238,1.03e-07,68;UBERON:0004111,1.08e-07,240;UBERON:0000956,1.81e-07,25;UBERON:0000203,1.81e-07,25;UBERON:0003056,2.75e-07,61;UBERON:0005423,2.82e-07,581;UBERON:0000922,5.00e-07,592;UBERON:0005631,5.61e-07,14;UBERON:0000158,5.61e-07,14;UBERON:0003075,6.04e-07,82;UBERON:0007284,6.04e-07,82;UBERON:0000161,8.13e-07,36;UBERON:0001016,9.28e-07,89 | |||
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| ||
|short_description=p1@NDFIP2 | |short_description=p1@NDFIP2 | ||
}} | }} |
Latest revision as of 02:25, 18 September 2015
Short description: | p1@NDFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDFIP2_5end |
Coexpression cluster: | C2272_amniotic_chorionic_oral_glassy_colon_epidermoid_Mallassezderived |
Association with transcript: | -161bp_to_ENST00000487865_5end |
EntrezGene: | NDFIP2 |
HGNC: | 18537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.82e-16 | 42 |
endodermal cell | 1.25e-13 | 58 |
epithelial cell | 5.41e-13 | 253 |
epithelial cell of alimentary canal | 1.69e-11 | 20 |
general ecto-epithelial cell | 5.38e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.89e-08 | 143 |
carcinoma | 3.48e-08 | 106 |
female reproductive organ cancer | 6.90e-07 | 27 |