FFCP PHASE1:Hg19::chr10:134150876..134150893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80313 | |EntrezGene=80313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29346 | |HGNC=29346 | ||
|TSSclassifier=strong | |||
|UniProt=B4DW88 | |UniProt=B4DW88 | ||
|association_with_transcript=32bp_to_ENST00000432555_5end | |association_with_transcript=32bp_to_ENST00000432555_5end | ||
|cluster_id=chr10:134150876..134150893,+ | |||
|description=CAGE_peak_5_at_LRRC27_5end | |description=CAGE_peak_5_at_LRRC27_5end | ||
|id=chr10:134150876..134150893,+ | |id=chr10:134150876..134150893,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.54e-12!35;CL:0002139!1.29e-09!24;CL:0002078!2.95e-08!44 | |ontology_enrichment_celltype=CL:0000115!3.54e-12!35;CL:0002139!1.29e-09!24;CL:0002078!2.95e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.22e-15;3!CL:0000037;2.32e-12;1!CL:0001024;2.32e-12;1!CL:0002262;8.28e-07;2!CL:1000398;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,8.44e-16,3;CL:0001024,3.45e-12,1;CL:0000115,1.31e-07,36;CL:0002262,7.20e-07,2;CL:1000398,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.32e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.04e-12!115;UBERON:0000025!6.28e-11!194;UBERON:0001049!3.50e-10!57;UBERON:0005068!3.50e-10!57;UBERON:0006241!3.50e-10!57;UBERON:0007135!3.50e-10!57;UBERON:0002616!1.80e-09!59;UBERON:0004111!3.20e-09!241;UBERON:0000477!3.43e-08!286;UBERON:0000955!3.70e-08!69;UBERON:0006238!3.70e-08!69;UBERON:0001017!5.04e-08!82;UBERON:0005743!8.41e-08!86;UBERON:0002405!1.44e-07!115;UBERON:0000073!1.45e-07!94;UBERON:0001016!1.45e-07!94;UBERON:0005057!2.15e-07!26 | |ontology_enrichment_uberon=UBERON:0007023!3.04e-12!115;UBERON:0000025!6.28e-11!194;UBERON:0001049!3.50e-10!57;UBERON:0005068!3.50e-10!57;UBERON:0006241!3.50e-10!57;UBERON:0007135!3.50e-10!57;UBERON:0002616!1.80e-09!59;UBERON:0004111!3.20e-09!241;UBERON:0000477!3.43e-08!286;UBERON:0000955!3.70e-08!69;UBERON:0006238!3.70e-08!69;UBERON:0001017!5.04e-08!82;UBERON:0005743!8.41e-08!86;UBERON:0002405!1.44e-07!115;UBERON:0000073!1.45e-07!94;UBERON:0001016!1.45e-07!94;UBERON:0005057!2.15e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.32e-12;1!UBERON:0001785;2.32e-12;1!UBERON:0002464;2.32e-12;1!UBERON:0004904;2.32e-12;1!UBERON:0001021;2.32e-12;1!UBERON:0002108;6.50e-10;4!UBERON:0003714;8.28e-07;2!UBERON:0001281;8.28e-07;2!UBERON:0005162;8.28e-07;2!UBERON:0000122;8.28e-07;2!UBERON:0003497;8.28e-07;2!UBERON:0003909;8.28e-07;2!UBERON:0003835;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.96e-12,1;UBERON:0001785,1.96e-12,1;UBERON:0002464,1.96e-12,1;UBERON:0004904,1.96e-12,1;UBERON:0001021,1.96e-12,1;UBERON:0003902,1.96e-12,1;UBERON:0005425,1.96e-12,1;UBERON:0002108,6.51e-10,4;UBERON:0001281,7.20e-07,2;UBERON:0003497,7.20e-07,2;UBERON:0003909,7.20e-07,2;UBERON:0003835,7.20e-07,2;UBERON:0003714,7.61e-07,2;UBERON:0005162,7.61e-07,2;UBERON:0000122,7.61e-07,2 | |||
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| ||
|short_description=p5@LRRC27 | |short_description=p5@LRRC27 | ||
}} | }} |
Latest revision as of 03:54, 17 September 2015
Short description: | p5@LRRC27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC27_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000432555_5end |
EntrezGene: | LRRC27 |
HGNC: | 29346 |
UniProt: | B4DW88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 8.44e-16 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.45e-12 | 1 |
endothelial cell | 1.31e-07 | 36 |
endothelial cell of sinusoid | 7.20e-07 | 2 |
endothelial cell of hepatic sinusoid | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.96e-12 | 1 |
cranial nerve | 1.96e-12 | 1 |
nerve trunk | 1.96e-12 | 1 |
nerve connecting eye with brain | 1.96e-12 | 1 |
nerve | 1.96e-12 | 1 |
retinal neural layer | 1.96e-12 | 1 |
presumptive neural retina | 1.96e-12 | 1 |
small intestine | 6.51e-10 | 4 |
hepatic sinusoid | 7.20e-07 | 2 |
abdomen blood vessel | 7.20e-07 | 2 |
sinusoid | 7.20e-07 | 2 |
abdominal segment blood vessel | 7.20e-07 | 2 |
neural tissue | 7.61e-07 | 2 |
multi cell component structure | 7.61e-07 | 2 |
neuron projection bundle | 7.61e-07 | 2 |