FFCP PHASE1:Hg19::chr14:23445970..23445991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5F5 | |UniProt=G3V5F5 | ||
|association_with_transcript=21bp_to_ENST00000553911_5end | |association_with_transcript=21bp_to_ENST00000553911_5end | ||
|cluster_id=chr14:23445970..23445991,- | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_6_at_AJUBA_5end | |description=CAGE_peak_6_at_AJUBA_5end | ||
|id=chr14:23445970..23445991,- | |id=chr14:23445970..23445991,- | ||
|ontology_enrichment_celltype=CL:0000066!7.82e-37!254;CL:0000223!1.97e-18!59;CL:0000181!1.42e-10!12;CL:0000417!1.42e-10!12;CL:0000668!1.42e-10!12;CL:0000414!1.42e-10!12;CL:0000412!1.42e-10!12;CL:0000182!1.42e-10!12;CL:0002076!3.25e-10!43;CL:0000220!5.84e-10!246;CL:0002321!1.03e-09!248;CL:0002251!1.38e-07!21 | |ontology_enrichment_celltype=CL:0000066!7.82e-37!254;CL:0000223!1.97e-18!59;CL:0000181!1.42e-10!12;CL:0000417!1.42e-10!12;CL:0000668!1.42e-10!12;CL:0000414!1.42e-10!12;CL:0000412!1.42e-10!12;CL:0000182!1.42e-10!12;CL:0002076!3.25e-10!43;CL:0000220!5.84e-10!246;CL:0002321!1.03e-09!248;CL:0002251!1.38e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.80e-22;12!CL:0002251;3.32e-12;20!CL:0002076;7.23e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.93e-24,58;CL:0000182,3.18e-22,12;CL:0000066,1.31e-16,253;CL:0002251,2.55e-12,20;CL:0002076,7.00e-10,42 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.15e-25;13!UBERON:0004161;1.18e-18;11!UBERON:0001041;3.69e-15;30!UBERON:0003104;1.99e-14;31!CL:0000223;8.74e-14;58 | |||
|ontology_enrichment_disease=DOID:305!7.84e-25!106;DOID:0050687!1.15e-21!143;DOID:162!1.13e-12!235;DOID:14566!2.07e-12!239;DOID:7!5.78e-08!39;DOID:299!8.76e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;6.42e-12;25!DOID:3119;2.95e-10;14!DOID:7;1.59e-09;39!DOID:4929;4.52e-09;2!DOID:305;6.60e-07;106!DOID:1749;6.62e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.49e-22,106;DOID:0050687,1.07e-14,143;DOID:299,6.38e-12,25;DOID:7,6.37e-11,39;DOID:3119,3.21e-10,14;DOID:4929,5.34e-09,2;DOID:162,7.35e-09,235;DOID:14566,1.54e-08,239;DOID:1749,4.67e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.61e-19!169;UBERON:0000925!5.61e-19!169;UBERON:0006595!5.61e-19!169;UBERON:0005911!3.91e-17!82;UBERON:0001007!2.11e-16!155;UBERON:0001555!2.11e-16!155;UBERON:0007026!2.11e-16!155;UBERON:0007499!9.79e-16!25;UBERON:0003929!4.20e-15!54;UBERON:0004921!6.01e-15!129;UBERON:0004185!6.01e-15!129;UBERON:0009856!7.29e-15!26;UBERON:0008835!9.42e-15!22;UBERON:0003894!9.42e-15!22;UBERON:0009497!6.11e-14!25;UBERON:0000015!6.11e-14!25;UBERON:0002423!6.11e-14!25;UBERON:0006235!6.11e-14!25;UBERON:0004161!6.11e-14!25;UBERON:0009854!7.63e-14!23;UBERON:0005172!2.38e-13!55;UBERON:0005173!2.38e-13!55;UBERON:0005177!2.58e-13!107;UBERON:0000077!2.98e-12!130;UBERON:0001041!1.40e-11!98;UBERON:0002107!1.83e-11!19;UBERON:0006925!1.83e-11!19;UBERON:0008836!1.83e-11!19;UBERON:0002417!4.60e-11!61;UBERON:0000916!4.60e-11!61;UBERON:0000466!2.38e-10!126;UBERON:0000949!3.70e-10!45;UBERON:0003104!5.03e-10!238;UBERON:0009142!5.03e-10!238;UBERON:0000481!1.18e-09!347;UBERON:0005057!5.19e-09!26;UBERON:0002368!1.22e-08!35;UBERON:0001048!1.37e-08!168;UBERON:0002530!1.09e-07!59;UBERON:0006554!1.26e-07!44;UBERON:0009569!1.30e-07!113;UBERON:0000344!1.53e-07!12;UBERON:0001008!2.55e-07!45;UBERON:0002365!4.30e-07!31;UBERON:0002330!4.30e-07!31;UBERON:0000058!4.97e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.12e-26;25!UBERON:0002107;2.86e-21;19!UBERON:0006925;2.86e-21;19!UBERON:0002368;3.55e-12;33!UBERON:0002365;5.45e-12;31!UBERON:0002330;5.45e-12;31!UBERON:0000949;8.89e-11;43!UBERON:0002394;3.09e-10;4!UBERON:0003928;3.09e-10;4!UBERON:0005172;5.50e-10;52!UBERON:0005173;5.50e-10;52!UBERON:0001007;2.82e-09;81!UBERON:0005409;3.92e-08;22!UBERON:0002417;6.28e-08;58!UBERON:0000916;6.28e-08;58!UBERON:0004921;2.42e-07;33!UBERON:0000344;6.54e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.06e-30,22;UBERON:0003894,1.06e-30,22;UBERON:0009854,3.12e-29,23;UBERON:0007499,1.19e-26,25;UBERON:0009497,1.19e-26,25;UBERON:0000015,1.19e-26,25;UBERON:0002423,1.19e-26,25;UBERON:0006235,1.19e-26,25;UBERON:0004161,1.19e-26,25;UBERON:0009856,1.65e-25,26;UBERON:0002107,3.12e-21,19;UBERON:0006925,3.12e-21,19;UBERON:0008836,3.12e-21,19;UBERON:0004921,1.44e-19,118;UBERON:0003929,5.41e-17,54;UBERON:0001007,4.35e-16,145;UBERON:0001555,4.35e-16,145;UBERON:0007026,4.35e-16,145;UBERON:0001041,1.01e-14,87;UBERON:0005177,1.70e-14,101;UBERON:0005911,1.78e-14,82;UBERON:0005172,3.78e-14,54;UBERON:0005173,3.78e-14,54;UBERON:0004119,5.71e-14,160;UBERON:0000925,5.71e-14,160;UBERON:0006595,5.71e-14,160;UBERON:0000949,4.17e-13,45;UBERON:0002368,9.60e-13,35;UBERON:0002417,2.16e-12,60;UBERON:0000916,2.16e-12,60;UBERON:0002365,3.21e-12,31;UBERON:0002330,3.21e-12,31;UBERON:0009569,5.65e-09,112;UBERON:0002530,4.71e-08,59;UBERON:0011216,5.02e-08,223;UBERON:0002100,5.45e-08,199;UBERON:0003104,1.45e-07,160;UBERON:0009142,1.45e-07,160;UBERON:0005256,4.23e-07,122;UBERON:0005409,4.60e-07,25;UBERON:0000344,5.53e-07,20;UBERON:0002394,5.73e-07,6;UBERON:0003928,5.73e-07,6 | |||
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| ||
|short_description=p6@AJUBA | |short_description=p6@AJUBA | ||
}} | }} |
Latest revision as of 08:25, 19 September 2015
Short description: | p6@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AJUBA_5end |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | 21bp_to_ENST00000553911_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | G3V5F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.93e-24 | 58 |
hepatocyte | 3.18e-22 | 12 |
epithelial cell | 1.31e-16 | 253 |
epithelial cell of alimentary canal | 2.55e-12 | 20 |
endo-epithelial cell | 7.00e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.49e-22 | 106 |
cell type cancer | 1.07e-14 | 143 |
adenocarcinoma | 6.38e-12 | 25 |
disease of anatomical entity | 6.37e-11 | 39 |
gastrointestinal system cancer | 3.21e-10 | 14 |
tubular adenocarcinoma | 5.34e-09 | 2 |
cancer | 7.35e-09 | 235 |
disease of cellular proliferation | 1.54e-08 | 239 |
squamous cell carcinoma | 4.67e-07 | 14 |