FFCP PHASE1:Mm9::chr5:38550223..38550234,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1052 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:38550223..38550234,- | |||
|description=CAGE_peak_at_chr5:38550223..38550234,- | |description=CAGE_peak_at_chr5:38550223..38550234,- | ||
|id=chr5:38550223..38550234,- | |id=chr5:38550223..38550234,- | ||
|ontology_enrichment_celltype=CL:0000117!3.83e-23!23;CL:0000337!3.83e-23!23;CL:0002319!1.95e-20!43;CL:0000540!7.91e-20!33;CL:0000047!7.91e-20!33;CL:0000031!7.91e-20!33;CL:0000404!7.91e-20!33;CL:0000221!1.15e-19!44;CL:0000133!1.15e-19!44;CL:0000055!1.54e-19!50;CL:0000393!3.12e-19!39;CL:0000211!3.12e-19!39;CL:0002321!3.94e-10!70;CL:0000220!3.94e-10!70;CL:0000723!5.81e-07!91;CL:0000048!5.81e-07!91;CL:0002609!9.81e-07!6 | |ontology_enrichment_celltype=CL:0000117!3.83e-23!23;CL:0000337!3.83e-23!23;CL:0002319!1.95e-20!43;CL:0000540!7.91e-20!33;CL:0000047!7.91e-20!33;CL:0000031!7.91e-20!33;CL:0000404!7.91e-20!33;CL:0000221!1.15e-19!44;CL:0000133!1.15e-19!44;CL:0000055!1.54e-19!50;CL:0000393!3.12e-19!39;CL:0000211!3.12e-19!39;CL:0002321!3.94e-10!70;CL:0000220!3.94e-10!70;CL:0000723!5.81e-07!91;CL:0000048!5.81e-07!91;CL:0002609!9.81e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.89e-63,23;CL:0000337,3.89e-63,23;CL:0000540,7.00e-43,33;CL:0000047,7.00e-43,33;CL:0000031,7.00e-43,33;CL:0000404,7.00e-43,33;CL:0000393,1.05e-35,39;CL:0000211,1.05e-35,39;CL:0002319,4.95e-32,43;CL:0000221,3.23e-31,44;CL:0000133,3.23e-31,44;CL:0002321,3.47e-18,70;CL:0000723,1.18e-14,91;CL:0000048,1.18e-14,91;CL:0002609,1.36e-13,6;CL:0000034,1.71e-13,97;CL:0002612,7.63e-12,3;CL:0002614,1.25e-11,3;CL:0002613,2.57e-11,3;CL:0002610,9.81e-11,3;CL:0002611,7.01e-08,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.15e-27!75;UBERON:0001016!6.15e-27!75;UBERON:0001017!3.17e-26!73;UBERON:0005743!3.17e-26!73;UBERON:0002346!3.41e-26!71;UBERON:0003075!3.41e-26!71;UBERON:0007284!3.41e-26!71;UBERON:0004121!5.48e-26!102;UBERON:0000924!5.48e-26!102;UBERON:0006601!5.48e-26!102;UBERON:0002020!3.34e-22!34;UBERON:0001049!5.03e-21!52;UBERON:0005068!5.03e-21!52;UBERON:0006241!5.03e-21!52;UBERON:0007135!5.03e-21!52;UBERON:0002616!1.08e-19!49;UBERON:0000033!2.30e-19!63;UBERON:0000955!5.14e-19!50;UBERON:0006238!5.14e-19!50;UBERON:0002791!3.17e-17!29;UBERON:0003528!3.17e-17!29;UBERON:0001893!3.17e-17!29;UBERON:0003056!6.53e-17!49;UBERON:0003080!2.58e-15!40;UBERON:0002780!1.25e-14!39;UBERON:0001890!1.25e-14!39;UBERON:0006240!1.25e-14!39;UBERON:0000956!8.04e-12!21;UBERON:0001869!8.04e-12!21;UBERON:0000203!8.04e-12!21;UBERON:0007811!1.12e-10!86;UBERON:0002619!6.35e-09!17;UBERON:0000153!1.41e-08!94 | |ontology_enrichment_uberon=UBERON:0000073!6.15e-27!75;UBERON:0001016!6.15e-27!75;UBERON:0001017!3.17e-26!73;UBERON:0005743!3.17e-26!73;UBERON:0002346!3.41e-26!71;UBERON:0003075!3.41e-26!71;UBERON:0007284!3.41e-26!71;UBERON:0004121!5.48e-26!102;UBERON:0000924!5.48e-26!102;UBERON:0006601!5.48e-26!102;UBERON:0002020!3.34e-22!34;UBERON:0001049!5.03e-21!52;UBERON:0005068!5.03e-21!52;UBERON:0006241!5.03e-21!52;UBERON:0007135!5.03e-21!52;UBERON:0002616!1.08e-19!49;UBERON:0000033!2.30e-19!63;UBERON:0000955!5.14e-19!50;UBERON:0006238!5.14e-19!50;UBERON:0002791!3.17e-17!29;UBERON:0003528!3.17e-17!29;UBERON:0001893!3.17e-17!29;UBERON:0003056!6.53e-17!49;UBERON:0003080!2.58e-15!40;UBERON:0002780!1.25e-14!39;UBERON:0001890!1.25e-14!39;UBERON:0006240!1.25e-14!39;UBERON:0000956!8.04e-12!21;UBERON:0001869!8.04e-12!21;UBERON:0000203!8.04e-12!21;UBERON:0007811!1.12e-10!86;UBERON:0002619!6.35e-09!17;UBERON:0000153!1.41e-08!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.31e-33,34;UBERON:0000073,3.12e-30,54;UBERON:0001017,8.57e-26,73;UBERON:0001016,5.38e-25,75;UBERON:0001049,2.82e-23,52;UBERON:0005068,2.82e-23,52;UBERON:0006241,2.82e-23,52;UBERON:0007135,2.82e-23,52;UBERON:0003528,1.17e-20,29;UBERON:0002791,1.17e-20,29;UBERON:0001893,1.17e-20,29;UBERON:0004121,7.47e-19,95;UBERON:0000924,7.47e-19,95;UBERON:0006601,7.47e-19,95;UBERON:0002346,3.32e-18,64;UBERON:0003075,3.32e-18,64;UBERON:0007284,3.32e-18,64;UBERON:0001948,4.50e-18,5;UBERON:0002315,4.50e-18,5;UBERON:0002420,7.67e-16,8;UBERON:0007245,7.67e-16,8;UBERON:0010009,7.67e-16,8;UBERON:0010011,7.67e-16,8;UBERON:0000454,7.67e-16,8;UBERON:0010371,1.72e-15,73;UBERON:0002240,5.04e-15,6;UBERON:0005174,5.04e-15,6;UBERON:0001137,5.04e-15,6;UBERON:0002780,1.13e-14,39;UBERON:0001890,1.13e-14,39;UBERON:0006240,1.13e-14,39;UBERON:0003080,3.07e-14,40;UBERON:0002616,4.79e-14,46;UBERON:0000955,1.10e-13,47;UBERON:0006238,1.10e-13,47;UBERON:0002257,7.63e-12,3;UBERON:0002038,1.25e-11,3;UBERON:0009663,1.25e-11,3;UBERON:0009661,1.25e-11,3;UBERON:0000125,1.25e-11,3;UBERON:0002308,1.25e-11,3;UBERON:0010314,1.69e-11,92;UBERON:0003056,3.94e-11,49;UBERON:0004684,9.81e-11,3;UBERON:0002275,9.81e-11,3;UBERON:0003076,2.22e-10,12;UBERON:0003057,2.22e-10,12;UBERON:0000956,4.84e-09,21;UBERON:0001869,4.84e-09,21;UBERON:0000203,4.84e-09,21;UBERON:0002950,7.88e-09,4;UBERON:0001891,7.88e-09,4;UBERON:0009616,7.88e-09,4;UBERON:0010286,7.88e-09,4;UBERON:0000025,1.56e-08,114;UBERON:0002256,7.01e-08,2;UBERON:0004111,1.02e-07,122;UBERON:0011216,5.53e-07,194;UBERON:0000369,5.89e-07,5;UBERON:0002435,5.89e-07,5;UBERON:0000204,5.89e-07,5;UBERON:0010082,5.89e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.550640256485045,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,3.1739458756322,1.26766280701236,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,1.03689612308478,3.24014251996058,1.47227472945967,1.14260393761521,3.97563373712904,1.10241719293459,1.24599112323707,0.919218786610021,3.30347642998166,1.27687338085188,1.22885226604995,1.31886287730194,4.02545631850602,2.6045668527838,3.90856198601933,3.93933827022176,1.5279824777681,4.12480019663135,6.83384067835694,1.4911955666024,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0.340860645156116,1.55871602761721,0.70667914902068,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.452167921657868,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,2.72280718857492,0,0,0,0,0.599162557619291,0,0.376963056338593,0.173824320192276,0.255715457330331,0.62336413367868,0,0,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,0.68741272937475,0,1.5107877947794,0.675022500231806,1.35096360967266,0.906284817968409,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.550640256485045,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,3.1739458756322,1.26766280701236,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,1.03689612308478,3.24014251996058,1.47227472945967,1.14260393761521,3.97563373712904,1.10241719293459,1.24599112323707,0.919218786610021,3.30347642998166,1.27687338085188,1.22885226604995,1.31886287730194,4.02545631850602,2.6045668527838,3.90856198601933,3.93933827022176,1.5279824777681,4.12480019663135,6.83384067835694,1.4911955666024,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0.340860645156116,1.55871602761721,0.70667914902068,0,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.452167921657868,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,2.72280718857492,0,0,0,0,0.599162557619291,0,0.376963056338593,0.173824320192276,0.255715457330331,0.62336413367868,0,0,0.124406970610093,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.514523061896422,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,0.68741272937475,0,1.5107877947794,0.675022500231806,1.35096360967266,0.906284817968409,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.37456602987953,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr5:38550223..38550234,- | |short_description=p@chr5:38550223..38550234,- | ||
}} | }} |
Latest revision as of 09:39, 4 August 2015
Short description: | p@chr5:38550223..38550234, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:38550223..38550234, - |
Coexpression cluster: | MCL_coexpression_mm9:1052 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.89e-63 | 23 |
neuroblast (sensu Vertebrata) | 3.89e-63 | 23 |
neuron | 7.00e-43 | 33 |
neuronal stem cell | 7.00e-43 | 33 |
neuroblast | 7.00e-43 | 33 |
electrically signaling cell | 7.00e-43 | 33 |
electrically responsive cell | 1.05e-35 | 39 |
electrically active cell | 1.05e-35 | 39 |
neural cell | 4.95e-32 | 43 |
ectodermal cell | 3.23e-31 | 44 |
neurectodermal cell | 3.23e-31 | 44 |
embryonic cell | 3.47e-18 | 70 |
somatic stem cell | 1.18e-14 | 91 |
multi fate stem cell | 1.18e-14 | 91 |
neuron of cerebral cortex | 1.36e-13 | 6 |
stem cell | 1.71e-13 | 97 |
neuron of the ventral spinal cord | 7.63e-12 | 3 |
neuron of the substantia nigra | 1.25e-11 | 3 |
striatum neuron | 2.57e-11 | 3 |
raphe nuclei neuron | 9.81e-11 | 3 |
neuron of the dorsal spinal cord | 7.01e-08 | 2 |