FFCP PHASE1:Hg19::chr10:75267425..75267426,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:75267425..75267426,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_at_chr10:75267425..75267426,- | |description=CAGE_peak_at_chr10:75267425..75267426,- | ||
|id=chr10:75267425..75267426,- | |id=chr10:75267425..75267426,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.60e-10;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.97e-19;1!UBERON:0006241;2.71e-07;3!UBERON:0003057;2.71e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-34!115;UBERON:0001049!3.31e-33!57;UBERON:0005068!3.31e-33!57;UBERON:0006241!3.31e-33!57;UBERON:0007135!3.31e-33!57;UBERON:0001017!9.38e-31!82;UBERON:0005743!1.02e-30!86;UBERON:0000073!1.97e-28!94;UBERON:0001016!1.97e-28!94;UBERON:0002616!3.64e-27!59;UBERON:0000955!4.35e-27!69;UBERON:0006238!4.35e-27!69;UBERON:0002020!2.57e-26!34;UBERON:0003528!2.57e-26!34;UBERON:0001893!4.09e-26!34;UBERON:0002780!1.88e-25!41;UBERON:0001890!1.88e-25!41;UBERON:0006240!1.88e-25!41;UBERON:0002346!2.15e-25!90;UBERON:0003080!1.06e-24!42;UBERON:0002791!1.65e-24!33;UBERON:0003075!9.37e-24!86;UBERON:0007284!9.37e-24!86;UBERON:0001869!2.60e-22!32;UBERON:0000153!3.44e-19!129;UBERON:0007811!3.44e-19!129;UBERON:0000924!2.64e-18!173;UBERON:0006601!2.64e-18!173;UBERON:0002308!1.52e-17!9;UBERON:0000125!1.52e-17!9;UBERON:0000033!4.97e-17!123;UBERON:0004121!5.70e-17!169;UBERON:0003056!1.23e-16!61;UBERON:0002619!2.92e-15!22;UBERON:0001950!2.74e-14!20;UBERON:0002420!1.72e-13!9;UBERON:0007245!1.72e-13!9;UBERON:0010009!1.72e-13!9;UBERON:0010011!1.72e-13!9;UBERON:0000454!1.72e-13!9;UBERON:0000956!4.11e-13!25;UBERON:0000203!4.11e-13!25;UBERON:0009663!4.25e-13!7;UBERON:0002298!5.15e-11!8;UBERON:0003076!1.52e-09!15;UBERON:0003057!1.52e-09!15;UBERON:0006331!1.11e-08!3;UBERON:0000988!3.69e-08!3;UBERON:0001871!6.48e-08!7;UBERON:0000025!2.61e-07!194;UBERON:0004733!5.86e-07!12;UBERON:0002028!5.86e-07!12;UBERON:0007277!5.86e-07!12;UBERON:0000200!8.26e-07!6;UBERON:0000922!8.93e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;9.81e-20;1!UBERON:0009661;9.81e-20;1!UBERON:0002950;9.81e-20;1!UBERON:0001891;9.81e-20;1!UBERON:0001736;2.97e-19;1!UBERON:0000125;7.01e-19;9!UBERON:0002308;7.01e-19;9!UBERON:0003528;3.56e-13;34!UBERON:0002020;3.56e-13;34!UBERON:0002791;3.33e-12;32!UBERON:0009663;1.68e-11;7!UBERON:0002780;2.54e-11;41!UBERON:0001890;2.54e-11;41!UBERON:0001875;1.50e-10;2!UBERON:0006514;1.50e-10;2!UBERON:0001897;1.72e-10;2!UBERON:0010225;1.72e-10;2!UBERON:0001893;2.27e-10;34!UBERON:0002148;2.60e-10;2!UBERON:0002702;2.60e-10;2!UBERON:0001829;2.60e-10;2!UBERON:0006331;2.60e-10;2!UBERON:0009662;2.60e-10;2!UBERON:0000073;8.73e-10;53!UBERON:0002616;8.73e-10;53!UBERON:0002420;3.77e-09;9!UBERON:0007245;3.77e-09;9!UBERON:0010009;3.77e-09;9!UBERON:0010011;3.77e-09;9!UBERON:0000454;3.77e-09;9!UBERON:0001016;4.36e-09;83!UBERON:0001869;1.64e-08;32!UBERON:0001017;2.31e-08;75!UBERON:0001950;2.54e-08;20!UBERON:0002619;1.20e-07;22!UBERON:0000988;2.71e-07;3!UBERON:0001870;2.71e-07;3!UBERON:0002240;2.71e-07;3!UBERON:0005174;2.71e-07;3!UBERON:0001137;2.71e-07;3!UBERON:0000956;7.95e-07;25!UBERON:0000203;7.95e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.37e-21,81;UBERON:0002038,8.95e-20,1;UBERON:0009661,8.95e-20,1;UBERON:0002950,8.95e-20,1;UBERON:0001891,8.95e-20,1;UBERON:0009616,8.95e-20,1;UBERON:0010286,8.95e-20,1;UBERON:0001049,8.96e-20,56;UBERON:0005068,8.96e-20,56;UBERON:0006241,8.96e-20,56;UBERON:0007135,8.96e-20,56;UBERON:0001736,2.25e-19,1;UBERON:0006298,2.25e-19,1;UBERON:0001016,5.70e-19,89;UBERON:0000125,8.67e-19,9;UBERON:0002308,8.67e-19,9;UBERON:0003528,2.08e-18,34;UBERON:0002020,2.08e-18,34;UBERON:0000073,4.41e-16,53;UBERON:0002616,4.41e-16,53;UBERON:0000955,4.49e-16,68;UBERON:0006238,4.49e-16,68;UBERON:0002780,2.03e-15,41;UBERON:0001890,2.03e-15,41;UBERON:0003080,2.03e-15,41;UBERON:0006240,2.03e-15,41;UBERON:0002791,8.10e-14,32;UBERON:0003075,1.88e-13,82;UBERON:0007284,1.88e-13,82;UBERON:0001893,4.92e-13,34;UBERON:0002346,8.21e-13,86;UBERON:0004121,6.88e-12,171;UBERON:0000924,6.88e-12,171;UBERON:0006601,6.88e-12,171;UBERON:0009663,1.68e-11,7;UBERON:0010371,1.56e-10,104;UBERON:0001875,1.57e-10,2;UBERON:0006514,1.57e-10,2;UBERON:0001897,1.72e-10,2;UBERON:0010225,1.72e-10,2;UBERON:0003056,2.10e-10,61;UBERON:0001829,2.27e-10,2;UBERON:0002702,3.27e-10,2;UBERON:0002148,3.58e-10,2;UBERON:0006331,3.58e-10,2;UBERON:0009662,3.58e-10,2;UBERON:0007023,1.06e-09,114;UBERON:0002420,3.77e-09,9;UBERON:0007245,3.77e-09,9;UBERON:0010009,3.77e-09,9;UBERON:0010011,3.77e-09,9;UBERON:0000454,3.77e-09,9;UBERON:0001869,4.33e-09,32;UBERON:0011216,6.17e-09,223;UBERON:0001950,2.57e-08,20;UBERON:0010314,3.35e-08,132;UBERON:0002619,1.22e-07,22;UBERON:0002240,2.97e-07,3;UBERON:0005174,2.97e-07,3;UBERON:0001137,2.97e-07,3;UBERON:0001870,3.16e-07,3;UBERON:0000988,3.35e-07,3;UBERON:0000956,8.04e-07,25;UBERON:0000203,8.04e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0.552896299656123,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.14882371451584,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.817220436669454,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1267183763585,0,0.443716206147409,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,1.59633859057151,0,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.135075169236789,0,0,0.380494861163441,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.263091094251396,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0.245148321753905,0,0.392616934229891,1.18818560130834,0,0,0,0,0,0,0,0,0,1.37618785021362,3.44014999563483,0,0.203974470572744,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,2.48239190068549,0,0.23806443146374,0,0.186224142887574,0,0.12729431655633,0.404234377916439,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0.552896299656123,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.14882371451584,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.817220436669454,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.05786081394152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1267183763585,0,0.443716206147409,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.256916900385838,0,1.59633859057151,0,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.135075169236789,0,0,0.380494861163441,0,0.548257766857182,0,0.175871244359621,0,0,0,0,0,0,0,0,0.203909198930495,0.263091094251396,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0.245148321753905,0,0.392616934229891,1.18818560130834,0,0,0,0,0,0,0,0,0,1.37618785021362,3.44014999563483,0,0.203974470572744,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,2.48239190068549,0,0.23806443146374,0,0.186224142887574,0,0.12729431655633,0.404234377916439,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr10:75267425..75267426,- | |short_description=p@chr10:75267425..75267426,- | ||
}} | }} |
Latest revision as of 15:33, 23 July 2015
Short description: | p@chr10:75267425..75267426, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:75267425..75267426, - |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data