FFCP PHASE1:Hg19::chr10:103990396..103990405,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:103990396..103990405,+
|short_description=p@chr10:103990396..103990405,+
|description=CAGE_peak_at_chr10:103990396..103990405,+
|association_with_transcri...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:103990396..103990405,+ | |||
|description=CAGE_peak_at_chr10:103990396..103990405,+ | |||
|id=chr10:103990396..103990405,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.00e-14!254;CL:0000064!1.50e-07!3;CL:0005012!1.50e-07!3;CL:0000067!1.50e-07!3;CL:0002304!1.50e-07!3;CL:0002150!2.44e-07!3;CL:0000861!2.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.40e-46;3!CL:0000067;1.40e-46;3!CL:0005012;1.40e-46;3!CL:0002304;1.40e-46;3!CL:0000075;2.04e-09;27!CL:0000650;5.71e-09;2!CL:1000500;5.71e-09;2!CL:1000618;5.71e-09;2!CL:1001318;5.71e-09;2!CL:0002173;5.71e-09;2!CL:0000710;1.55e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.05e-47,3;CL:0000067,4.05e-47,3;CL:0005012,4.05e-47,3;CL:0002304,4.05e-47,3;CL:0000075,1.85e-09,27;CL:0000650,8.74e-09,2;CL:1000500,8.74e-09,2;CL:1000618,8.74e-09,2;CL:1001318,8.74e-09,2;CL:0002173,8.74e-09,2;CL:0000710,1.29e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.78e-23!106;DOID:0050687!6.77e-18!143;DOID:162!9.58e-10!235;DOID:14566!2.94e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.55e-13!9;UBERON:0008947!2.39e-11!38;UBERON:0003258!2.39e-11!38;UBERON:0000072!1.16e-10!46;UBERON:0000065!1.44e-10!53;UBERON:0000488!4.25e-09!4;UBERON:0001557!4.93e-08!19;UBERON:0001778!1.50e-07!3;UBERON:0001775!1.50e-07!3;UBERON:0001048!2.47e-07!168;UBERON:0001004!4.65e-07!72;UBERON:0000063!9.13e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.40e-46;3!UBERON:0001775;1.40e-46;3!UBERON:0000488;3.75e-35;4!UBERON:0002203;1.06e-23;6!UBERON:0001768;1.06e-23;6!UBERON:0002200;1.06e-23;6!UBERON:0007625;1.23e-22;11!UBERON:0001801;7.15e-18;14!UBERON:0000019;2.92e-13;19!UBERON:0000047;2.92e-13;19!UBERON:0004088;2.92e-13;19!UBERON:0010230;2.92e-13;19!UBERON:0006876;3.07e-13;11!UBERON:0000970;1.30e-12;20!UBERON:0002104;4.99e-12;21!UBERON:0001456;4.99e-12;21!UBERON:0010371;5.85e-12;31!UBERON:0000020;5.23e-11;23!UBERON:0001032;1.46e-10;24!UBERON:0004456;1.46e-10;24!UBERON:0003567;5.71e-09;2!UBERON:0003838;5.71e-09;2!UBERON:0003586;5.71e-09;2!UBERON:0005169;5.71e-09;2!UBERON:0002321;5.71e-09;2!UBERON:0005215;5.71e-09;2!UBERON:0002303;5.71e-09;2!UBERON:0002319;5.71e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.05e-47,3;UBERON:0001775,4.05e-47,3;UBERON:0000488,1.48e-35,4;UBERON:0002203,5.74e-24,6;UBERON:0001768,5.74e-24,6;UBERON:0002200,5.74e-24,6;UBERON:0007625,9.61e-23,11;UBERON:0001801,5.89e-18,14;UBERON:0006876,2.20e-13,11;UBERON:0000019,1.13e-12,20;UBERON:0000047,1.13e-12,20;UBERON:0010312,1.13e-12,20;UBERON:0004088,1.13e-12,20;UBERON:0010230,1.13e-12,20;UBERON:0003072,1.13e-12,20;UBERON:0004128,1.13e-12,20;UBERON:0003071,1.13e-12,20;UBERON:0005085,1.83e-12,31;UBERON:0000970,4.39e-12,21;UBERON:0002104,4.39e-12,21;UBERON:0001456,1.51e-11,22;UBERON:0000020,1.31e-10,24;UBERON:0001032,1.31e-10,24;UBERON:0004456,1.31e-10,24;UBERON:0003567,8.74e-09,2;UBERON:0003838,8.74e-09,2;UBERON:0003586,8.74e-09,2;UBERON:0005169,8.74e-09,2;UBERON:0002321,8.74e-09,2;UBERON:0005215,8.74e-09,2;UBERON:0002303,8.74e-09,2;UBERON:0002319,8.74e-09,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,1.09499540058307,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,1.70162670895322,1.99556457716308,2.28370442802128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.482022059766964,0.772057809126758,0.435758888184812,0.949082476444386,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.579652024875384,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.472775363535873,1.72371686620732,0,0.694499979733169,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.889563386041866,0.370691816839509,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0.60129367765797,0.829505531177977,0,0,0,0,0,0,0.173559738335131,0,0.609414446062818,0,0.171986032471617,1.54810130062536,1.24251839046515,0.985385484638511,0,0,0,0,0,0,0,0.320635281006135,0,0,0.288180834308212,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0.157611414598396,0,0,0,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71635536432595,0.308801447160972,0,0,1.73622634443823,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0,0.591424344868181,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0.935757853848423,0.198950775161368,0,0.22589216407792,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0.437062287854782,1.26698501011437,0.101988829741982,0.26721740526556,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,1.09499540058307,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,1.70162670895322,1.99556457716308,2.28370442802128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.482022059766964,0.772057809126758,0.435758888184812,0.949082476444386,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.579652024875384,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.472775363535873,1.72371686620732,0,0.694499979733169,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.889563386041866,0.370691816839509,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0.60129367765797,0.829505531177977,0,0,0,0,0,0,0.173559738335131,0,0.609414446062818,0,0.171986032471617,1.54810130062536,1.24251839046515,0.985385484638511,0,0,0,0,0,0,0,0.320635281006135,0,0,0.288180834308212,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0.157611414598396,0,0,0,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71635536432595,0.308801447160972,0,0,1.73622634443823,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0,0.591424344868181,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0.935757853848423,0.198950775161368,0,0.22589216407792,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0.437062287854782,1.26698501011437,0.101988829741982,0.26721740526556,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr10:103990396..103990405,+ | |||
}} | }} |
Latest revision as of 09:44, 23 July 2015
Short description: | p@chr10:103990396..103990405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:103990396..103990405, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.05e-47 | 3 |
ciliated epithelial cell | 4.05e-47 | 3 |
multi-ciliated epithelial cell | 4.05e-47 | 3 |
non-pigmented ciliary epithelial cell | 4.05e-47 | 3 |
columnar/cuboidal epithelial cell | 1.85e-09 | 27 |
mesangial cell | 8.74e-09 | 2 |
kidney interstitial cell | 8.74e-09 | 2 |
juxtaglomerular complex cell | 8.74e-09 | 2 |
renal interstitial pericyte | 8.74e-09 | 2 |
extraglomerular mesangial cell | 8.74e-09 | 2 |
neurecto-epithelial cell | 1.29e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.05e-47 | 3 |
ciliary body | 4.05e-47 | 3 |
atypical epithelium | 1.48e-35 | 4 |
vasculature of eye | 5.74e-24 | 6 |
uvea | 5.74e-24 | 6 |
vasculature of head | 5.74e-24 | 6 |
pigment epithelium of eye | 9.61e-23 | 11 |
anterior segment of eyeball | 5.89e-18 | 14 |
vasculature of organ | 2.20e-13 | 11 |
camera-type eye | 1.13e-12 | 20 |
simple eye | 1.13e-12 | 20 |
immature eye | 1.13e-12 | 20 |
ocular region | 1.13e-12 | 20 |
eyeball of camera-type eye | 1.13e-12 | 20 |
optic cup | 1.13e-12 | 20 |
optic vesicle | 1.13e-12 | 20 |
eye primordium | 1.13e-12 | 20 |
ectodermal placode | 1.83e-12 | 31 |
eye | 4.39e-12 | 21 |
visual system | 4.39e-12 | 21 |
face | 1.51e-11 | 22 |
sense organ | 1.31e-10 | 24 |
sensory system | 1.31e-10 | 24 |
entire sense organ system | 1.31e-10 | 24 |
abdomen connective tissue | 8.74e-09 | 2 |
abdominal segment connective tissue | 8.74e-09 | 2 |
trunk connective tissue | 8.74e-09 | 2 |
interstitial tissue | 8.74e-09 | 2 |
extraglomerular mesangium | 8.74e-09 | 2 |
kidney interstitium | 8.74e-09 | 2 |
juxtaglomerular apparatus | 8.74e-09 | 2 |
mesangium | 8.74e-09 | 2 |