FFCP PHASE1:Hg19::chr10:104155206..104155209,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:104155206..104155209,+
|short_description=p18@NFKB2
|description=CAGE_peak_18_at_NFKB2_5end
|association_with_transcript=-222bp_to_ENST00000336486,NM_0025...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4791 | |EntrezGene=4791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7795 | |HGNC=7795 | ||
|UniProt=A8K9D9, | |TSSclassifier=strong | ||
|UniProt=A8K9D9,Q00653 | |||
|association_with_transcript=-222bp_to_ENST00000336486,NM_002502,uc001kvd.2,uc010qqk.1_5end | |||
|cluster_id=chr10:104155206..104155209,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_18_at_NFKB2_5end | |||
|id=chr10:104155206..104155209,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.60e-42!42;CL:0000860!8.58e-39!45;CL:0000738!8.07e-32!140;CL:0002087!2.43e-31!119;CL:0000766!5.12e-28!76;CL:0002031!1.60e-27!124;CL:0000037!2.33e-26!172;CL:0000566!2.33e-26!172;CL:0000988!2.85e-26!182;CL:0002194!7.45e-26!63;CL:0000576!7.45e-26!63;CL:0000040!7.45e-26!63;CL:0000559!7.45e-26!63;CL:0000839!2.82e-25!70;CL:0002009!6.31e-25!65;CL:0000557!7.43e-25!71;CL:0002032!2.30e-22!165;CL:0000837!2.30e-22!165;CL:0000763!2.30e-17!112;CL:0000049!2.30e-17!112;CL:0000134!1.68e-10!358;CL:0002320!3.76e-10!365;CL:0002393!6.00e-09!9;CL:0002397!6.00e-09!9;CL:0000219!6.41e-09!390;CL:0000080!9.69e-08!6;CL:0000034!1.11e-07!444;CL:0000048!1.90e-07!430;CL:0000842!2.39e-07!3;CL:0000723!3.08e-07!436;CL:0000623!7.31e-07!3;CL:0000825!7.31e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.43e-44;33!CL:0002057;2.43e-44;33!CL:0000473;8.71e-32;39!CL:0000234;8.71e-32;39!CL:0000576;8.72e-29;48!CL:0000766;9.28e-23;69!CL:0002393;2.07e-18;6!CL:0002397;2.07e-18;6!CL:0002087;6.70e-13;104!CL:0000763;4.99e-12;100!CL:0000771;3.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-60,42;CL:0002057,1.06e-60,42;CL:0000473,6.53e-53,48;CL:0000234,6.53e-53,48;CL:0002194,5.34e-42,59;CL:0000576,5.34e-42,59;CL:0000040,5.34e-42,59;CL:0000559,5.34e-42,59;CL:0002009,1.37e-40,61;CL:0000766,3.94e-39,72;CL:0000839,1.96e-37,66;CL:0000557,7.37e-37,67;CL:0000763,1.29e-25,108;CL:0000049,1.29e-25,108;CL:0002087,7.19e-21,115;CL:0000738,5.37e-20,136;CL:0002031,6.24e-20,120;CL:0002032,1.30e-16,161;CL:0000837,1.30e-16,161;CL:0000037,7.66e-16,168;CL:0000988,6.10e-15,177;CL:0002393,1.51e-12,9;CL:0002397,1.51e-12,9;CL:0000771,3.28e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.06e-40;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.76e-24!80;UBERON:0002390!1.34e-23!102;UBERON:0003061!1.34e-23!102;UBERON:0001474!7.81e-22!86;UBERON:0002193!5.39e-21!112;UBERON:0004765!7.31e-18!101;UBERON:0001434!7.31e-18!101;UBERON:0002405!4.35e-15!115;UBERON:0002384!1.13e-09!375;UBERON:0003081!4.29e-09!216;UBERON:0002204!7.11e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.38e-32,76;UBERON:0001474,6.95e-30,82;UBERON:0004765,4.21e-27,90;UBERON:0002405,3.52e-26,93;UBERON:0002390,9.11e-25,98;UBERON:0003061,9.11e-25,98;UBERON:0001434,3.06e-24,100;UBERON:0002193,2.50e-22,108;UBERON:0002204,8.04e-14,167;UBERON:0003081,4.95e-11,203 | |||
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|short_description=p18@NFKB2 | |||
}} | }} |
Latest revision as of 00:47, 16 September 2015
Short description: | p18@NFKB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_NFKB2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -222bp_to_ENST00000336486, NM_002502, uc001kvd.2, uc010qqk.1_5end |
EntrezGene: | NFKB2 |
HGNC: | 7795 |
UniProt: | A8K9D9Q00653 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.06e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-60 | 42 |
defensive cell | 6.53e-53 | 48 |
phagocyte | 6.53e-53 | 48 |
monopoietic cell | 5.34e-42 | 59 |
monocyte | 5.34e-42 | 59 |
monoblast | 5.34e-42 | 59 |
promonocyte | 5.34e-42 | 59 |
macrophage dendritic cell progenitor | 1.37e-40 | 61 |
myeloid leukocyte | 3.94e-39 | 72 |
myeloid lineage restricted progenitor cell | 1.96e-37 | 66 |
granulocyte monocyte progenitor cell | 7.37e-37 | 67 |
myeloid cell | 1.29e-25 | 108 |
common myeloid progenitor | 1.29e-25 | 108 |
nongranular leukocyte | 7.19e-21 | 115 |
leukocyte | 5.37e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 6.24e-20 | 120 |
hematopoietic oligopotent progenitor cell | 1.30e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-16 | 161 |
hematopoietic stem cell | 7.66e-16 | 168 |
hematopoietic cell | 6.10e-15 | 177 |
intermediate monocyte | 1.51e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.51e-12 | 9 |
eosinophil | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.38e-32 | 76 |
bone element | 6.95e-30 | 82 |
skeletal element | 4.21e-27 | 90 |
immune system | 3.52e-26 | 93 |
hematopoietic system | 9.11e-25 | 98 |
blood island | 9.11e-25 | 98 |
skeletal system | 3.06e-24 | 100 |
hemolymphoid system | 2.50e-22 | 108 |
musculoskeletal system | 8.04e-14 | 167 |
lateral plate mesoderm | 4.95e-11 | 203 |