FFCP PHASE1:Hg19::chr11:109963536..109963580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85463 | |EntrezGene=85463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29362 | |HGNC=29362 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-345bp_to_uc010rwc.1_5end | |association_with_transcript=-345bp_to_uc010rwc.1_5end | ||
|cluster_id=chr11:109963536..109963580,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_ZC3H12C_5end | |description=CAGE_peak_2_at_ZC3H12C_5end | ||
|id=chr11:109963536..109963580,+ | |id=chr11:109963536..109963580,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.66e-14!42;CL:0000860!2.60e-13!45;CL:0002009!2.99e-13!65;CL:0002194!3.00e-12!63;CL:0000576!3.00e-12!63;CL:0000040!3.00e-12!63;CL:0000559!3.00e-12!63;CL:0000557!1.33e-10!71;CL:0000766!1.59e-09!76;CL:0000839!7.61e-09!70 | |ontology_enrichment_celltype=CL:0002057!2.66e-14!42;CL:0000860!2.60e-13!45;CL:0002009!2.99e-13!65;CL:0002194!3.00e-12!63;CL:0000576!3.00e-12!63;CL:0000040!3.00e-12!63;CL:0000559!3.00e-12!63;CL:0000557!1.33e-10!71;CL:0000766!1.59e-09!76;CL:0000839!7.61e-09!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-15;33!CL:0002057;3.93e-15;33!CL:0000473;6.81e-13;39!CL:0000234;6.81e-13;39!CL:0000576;2.86e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.71e-16,48;CL:0000234,8.71e-16,48;CL:0000860,3.48e-15,42;CL:0002057,3.48e-15,42;CL:0002009,7.63e-15,61;CL:0002194,1.07e-13,59;CL:0000576,1.07e-13,59;CL:0000040,1.07e-13,59;CL:0000559,1.07e-13,59;CL:0000557,5.09e-12,67;CL:0000766,2.42e-11,72;CL:0000839,4.25e-10,66;CL:0000763,9.55e-07,108;CL:0000049,9.55e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!6.85e-15!625;UBERON:0000480!1.46e-14!626;UBERON:0000923!1.05e-13!604;UBERON:0005291!1.05e-13!604;UBERON:0006598!1.05e-13!604;UBERON:0002532!1.05e-13!604;UBERON:0000922!1.39e-13!612;UBERON:0002050!2.16e-13!605;UBERON:0005423!2.16e-13!605;UBERON:0000468!2.45e-13!659;UBERON:0000062!1.09e-10!511;UBERON:0000926!1.26e-09!448;UBERON:0004120!1.26e-09!448;UBERON:0006603!1.26e-09!448;UBERON:0002371!5.00e-09!80;UBERON:0002204!5.63e-09!167;UBERON:0001474!1.14e-08!86;UBERON:0004765!1.73e-08!101;UBERON:0001434!1.73e-08!101;UBERON:0002405!2.17e-07!115;UBERON:0002193!4.78e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.74e-10,93;UBERON:0002371,6.13e-10,76;UBERON:0000922,6.71e-10,592;UBERON:0004765,9.59e-10,90;UBERON:0002193,4.83e-09,108;UBERON:0001474,8.44e-09,82;UBERON:0005423,9.40e-09,581;UBERON:0001434,1.97e-08,100;UBERON:0002050,2.02e-08,564;UBERON:0000923,4.10e-08,560;UBERON:0010316,4.10e-08,560;UBERON:0005291,4.10e-08,560;UBERON:0006598,4.10e-08,560;UBERON:0010317,4.10e-08,560;UBERON:0002532,4.10e-08,560;UBERON:0002390,8.63e-08,98;UBERON:0003061,8.63e-08,98;UBERON:0000926,1.03e-07,315;UBERON:0004120,1.03e-07,315;UBERON:0006603,1.03e-07,315;UBERON:0002204,1.52e-07,167;UBERON:0003081,6.48e-07,203 | |||
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| ||
|short_description=p2@ZC3H12C | |short_description=p2@ZC3H12C | ||
}} | }} |
Latest revision as of 01:17, 25 September 2015
Short description: | p2@ZC3H12C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZC3H12C_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -345bp_to_uc010rwc.1_5end |
EntrezGene: | ZC3H12C |
HGNC: | 29362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.71e-16 | 48 |
phagocyte | 8.71e-16 | 48 |
classical monocyte | 3.48e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.48e-15 | 42 |
macrophage dendritic cell progenitor | 7.63e-15 | 61 |
monopoietic cell | 1.07e-13 | 59 |
monocyte | 1.07e-13 | 59 |
monoblast | 1.07e-13 | 59 |
promonocyte | 1.07e-13 | 59 |
granulocyte monocyte progenitor cell | 5.09e-12 | 67 |
myeloid leukocyte | 2.42e-11 | 72 |
myeloid lineage restricted progenitor cell | 4.25e-10 | 66 |
myeloid cell | 9.55e-07 | 108 |
common myeloid progenitor | 9.55e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.74e-10 | 93 |
bone marrow | 6.13e-10 | 76 |
embryo | 6.71e-10 | 592 |
skeletal element | 9.59e-10 | 90 |
hemolymphoid system | 4.83e-09 | 108 |
bone element | 8.44e-09 | 82 |
developing anatomical structure | 9.40e-09 | 581 |
skeletal system | 1.97e-08 | 100 |
embryonic structure | 2.02e-08 | 564 |
germ layer | 4.10e-08 | 560 |
germ layer / neural crest | 4.10e-08 | 560 |
embryonic tissue | 4.10e-08 | 560 |
presumptive structure | 4.10e-08 | 560 |
germ layer / neural crest derived structure | 4.10e-08 | 560 |
epiblast (generic) | 4.10e-08 | 560 |
hematopoietic system | 8.63e-08 | 98 |
blood island | 8.63e-08 | 98 |
mesoderm | 1.03e-07 | 315 |
mesoderm-derived structure | 1.03e-07 | 315 |
presumptive mesoderm | 1.03e-07 | 315 |
musculoskeletal system | 1.52e-07 | 167 |
lateral plate mesoderm | 6.48e-07 | 203 |