FFCP PHASE1:Hg19::chr16:11650396..11650467,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=118bp_to_EU446689,EU831762,EU831840_5end | |association_with_transcript=118bp_to_EU446689,EU831762,EU831840_5end | ||
|cluster_id=chr16:11650396..11650467,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_5_at_LITAF_5end | |description=CAGE_peak_5_at_LITAF_5end | ||
|id=chr16:11650396..11650467,- | |id=chr16:11650396..11650467,- | ||
|ontology_enrichment_celltype=CL:0000766!7.83e-26!76;CL:0000557!2.93e-23!71;CL:0002009!1.43e-22!65;CL:0002194!1.85e-21!63;CL:0000576!1.85e-21!63;CL:0000040!1.85e-21!63;CL:0000559!1.85e-21!63;CL:0002057!2.76e-20!42;CL:0000839!4.42e-20!70;CL:0000738!4.60e-20!140;CL:0000860!4.72e-20!45;CL:0002087!1.72e-16!119;CL:0002031!2.71e-16!124;CL:0000763!8.83e-13!112;CL:0000049!8.83e-13!112;CL:0002032!1.28e-11!165;CL:0000837!1.28e-11!165;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0000988!5.95e-11!182 | |ontology_enrichment_celltype=CL:0000766!7.83e-26!76;CL:0000557!2.93e-23!71;CL:0002009!1.43e-22!65;CL:0002194!1.85e-21!63;CL:0000576!1.85e-21!63;CL:0000040!1.85e-21!63;CL:0000559!1.85e-21!63;CL:0002057!2.76e-20!42;CL:0000839!4.42e-20!70;CL:0000738!4.60e-20!140;CL:0000860!4.72e-20!45;CL:0002087!1.72e-16!119;CL:0002031!2.71e-16!124;CL:0000763!8.83e-13!112;CL:0000049!8.83e-13!112;CL:0002032!1.28e-11!165;CL:0000837!1.28e-11!165;CL:0000037!1.28e-11!172;CL:0000566!1.28e-11!172;CL:0000988!5.95e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.50e-29;33!CL:0002057;2.50e-29;33!CL:0000473;1.23e-27;39!CL:0000234;1.23e-27;39!CL:0000576;8.51e-20;48!CL:0000766;1.84e-16;69!CL:0000738;3.40e-08;136!CL:0002087;6.34e-08;104!CL:0000763;7.49e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.15e-40,72;CL:0000557,3.88e-37,67;CL:0002009,2.50e-36,61;CL:0000473,4.01e-36,48;CL:0000234,4.01e-36,48;CL:0002194,1.70e-34,59;CL:0000576,1.70e-34,59;CL:0000040,1.70e-34,59;CL:0000559,1.70e-34,59;CL:0000839,3.37e-33,66;CL:0000860,2.35e-31,42;CL:0002057,2.35e-31,42;CL:0000738,9.88e-29,136;CL:0002031,4.18e-25,120;CL:0002087,4.56e-24,115;CL:0000763,2.41e-23,108;CL:0000049,2.41e-23,108;CL:0002032,1.51e-19,161;CL:0000837,1.51e-19,161;CL:0000037,2.94e-19,168;CL:0000988,1.47e-18,177;CL:0000094,6.10e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.11e-23;42!CL:0000049;7.20e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.20e-22!102;UBERON:0003061!7.20e-22!102;UBERON:0002371!5.81e-18!80;UBERON:0002193!3.75e-17!112;UBERON:0001474!1.15e-16!86;UBERON:0004765!5.83e-13!101;UBERON:0001434!5.83e-13!101;UBERON:0002405!4.46e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.26e-07;15!UBERON:0000179;2.26e-07;15!UBERON:0000463;2.26e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.08e-33,98;UBERON:0003061,2.08e-33,98;UBERON:0002371,2.53e-31,76;UBERON:0002193,3.89e-29,108;UBERON:0001474,1.03e-28,82;UBERON:0004765,3.03e-24,90;UBERON:0002405,7.76e-23,93;UBERON:0001434,1.37e-21,100;UBERON:0003081,4.64e-10,203;UBERON:0002204,1.45e-07,167;UBERON:0000178,2.15e-07,15;UBERON:0000179,2.15e-07,15;UBERON:0000463,2.15e-07,15 | |||
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| ||
|short_description=p5@LITAF | |short_description=p5@LITAF | ||
}} | }} |
Latest revision as of 06:21, 20 September 2015
Short description: | p5@LITAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LITAF_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 118bp_to_EU446689, EU831762, EU831840_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.15e-40 | 72 |
granulocyte monocyte progenitor cell | 3.88e-37 | 67 |
macrophage dendritic cell progenitor | 2.50e-36 | 61 |
defensive cell | 4.01e-36 | 48 |
phagocyte | 4.01e-36 | 48 |
monopoietic cell | 1.70e-34 | 59 |
monocyte | 1.70e-34 | 59 |
monoblast | 1.70e-34 | 59 |
promonocyte | 1.70e-34 | 59 |
myeloid lineage restricted progenitor cell | 3.37e-33 | 66 |
classical monocyte | 2.35e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-31 | 42 |
leukocyte | 9.88e-29 | 136 |
hematopoietic lineage restricted progenitor cell | 4.18e-25 | 120 |
nongranular leukocyte | 4.56e-24 | 115 |
myeloid cell | 2.41e-23 | 108 |
common myeloid progenitor | 2.41e-23 | 108 |
hematopoietic oligopotent progenitor cell | 1.51e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-19 | 161 |
hematopoietic stem cell | 2.94e-19 | 168 |
hematopoietic cell | 1.47e-18 | 177 |
granulocyte | 6.10e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.08e-33 | 98 |
blood island | 2.08e-33 | 98 |
bone marrow | 2.53e-31 | 76 |
hemolymphoid system | 3.89e-29 | 108 |
bone element | 1.03e-28 | 82 |
skeletal element | 3.03e-24 | 90 |
immune system | 7.76e-23 | 93 |
skeletal system | 1.37e-21 | 100 |
lateral plate mesoderm | 4.64e-10 | 203 |
musculoskeletal system | 1.45e-07 | 167 |
blood | 2.15e-07 | 15 |
haemolymphatic fluid | 2.15e-07 | 15 |
organism substance | 2.15e-07 | 15 |