FFCP PHASE1:Hg19::chr11:35252515..35252531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=449bp_to_AB073901_5end | |association_with_transcript=449bp_to_AB073901_5end | ||
|cluster_id=chr11:35252515..35252531,+ | |||
|description=CAGE_peak_22_at_CD44_5end | |description=CAGE_peak_22_at_CD44_5end | ||
|id=chr11:35252515..35252531,+ | |id=chr11:35252515..35252531,+ | ||
|ontology_enrichment_celltype=CL:0000557!1.37e-15!71;CL:0002009!3.32e-15!65;CL:0002057!1.07e-14!42;CL:0002194!1.69e-14!63;CL:0000576!1.69e-14!63;CL:0000040!1.69e-14!63;CL:0000559!1.69e-14!63;CL:0000839!2.47e-14!70;CL:0000766!2.87e-14!76;CL:0000860!4.55e-14!45;CL:0000763!1.05e-07!112;CL:0000049!1.05e-07!112;CL:0002620!3.80e-07!23 | |ontology_enrichment_celltype=CL:0000557!1.37e-15!71;CL:0002009!3.32e-15!65;CL:0002057!1.07e-14!42;CL:0002194!1.69e-14!63;CL:0000576!1.69e-14!63;CL:0000040!1.69e-14!63;CL:0000559!1.69e-14!63;CL:0000839!2.47e-14!70;CL:0000766!2.87e-14!76;CL:0000860!4.55e-14!45;CL:0000763!1.05e-07!112;CL:0000049!1.05e-07!112;CL:0002620!3.80e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-28;33!CL:0002057;1.49e-28;33!CL:0000473;3.98e-25;39!CL:0000234;3.98e-25;39!CL:0000576;9.74e-13;48!CL:0000766;2.13e-08;69!CL:0000135;5.47e-07;3!CL:0000388;5.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.00e-24,48;CL:0000234,2.00e-24,48;CL:0000860,7.23e-23,42;CL:0002057,7.23e-23,42;CL:0002009,6.53e-20,61;CL:0002194,2.86e-19,59;CL:0000576,2.86e-19,59;CL:0000040,2.86e-19,59;CL:0000559,2.86e-19,59;CL:0000557,6.09e-19,67;CL:0000839,6.75e-18,66;CL:0000766,3.37e-17,72;CL:0000763,1.62e-09,108;CL:0000049,1.62e-09,108;CL:0000048,4.04e-09,427;CL:0002031,4.83e-09,120;CL:0000723,9.90e-09,433;CL:0000034,3.13e-08,441;CL:0002087,3.32e-08,115;CL:0000134,5.13e-08,354;CL:0000738,9.57e-08,136;CL:0002320,1.48e-07,361;CL:0000135,5.39e-07,3;CL:0000388,5.39e-07,3;CL:0000219,7.67e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.83e-13!80;UBERON:0001474!4.85e-11!86;UBERON:0004765!1.14e-09!101;UBERON:0001434!1.14e-09!101;UBERON:0002204!1.90e-09!167;UBERON:0002390!1.61e-08!102;UBERON:0003061!1.61e-08!102;UBERON:0003102!4.00e-07!95;UBERON:0002193!9.09e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.47e-07;3!UBERON:0000043;5.47e-07;3!UBERON:0007845;5.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.13e-15,76;UBERON:0001474,6.64e-14,82;UBERON:0001434,6.18e-12,100;UBERON:0004765,6.25e-12,90;UBERON:0002204,1.23e-11,167;UBERON:0002405,2.77e-11,93;UBERON:0002390,3.28e-11,98;UBERON:0003061,3.28e-11,98;UBERON:0002193,2.04e-09,108;UBERON:0002384,8.97e-08,371;UBERON:0007846,5.39e-07,3;UBERON:0000043,5.39e-07,3;UBERON:0007845,5.39e-07,3 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,1.04474251279935,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0.447830948479849,0,0.257575567634187,1.30858414901608,1.51150377475524,1.4555043671269,1.85943229524548,1.23350366406548,2.16794459626573,2.01384674625505,1.5369642391746,1.6553756092201,0,1.29096936716765,1.35426486594342,3.01187743268168,1.36453075028923,0.224723484445085,1.83650335422542,0.641858054152187,5.75403413219137,1.31940520074686,2.19410023383795,1.27867425159808,4.93355705668593,5.10646702222026,3.11411124497787,2.76373531782418,2.08593167368081,0.434377689410233,1.81619850790011,0.736555271975129,2.21523671208619,0.211255286311942,0,0,0.112328631146495,0.600707571366025,0.803627933485401,0,0.79566670879636,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0.393419540227666,0.786021525498329,1.23360899399706,0.167186495390678,0,0,1.94826728407911,0.111410456885174,0.294605907474837,0.443067789167242,0.541607727530031,0.25618263945135,0.260118695119756,0.657751618414705,0,0,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,1.60464117470104,0,0,0,0.12786256184353,4.3372698286148,1.50401373190767,2.89693037921647,0,0.973269740605272,0,0.443458794925128,0.087834785693126,0,0.364295288292542,0,0.649094787309367,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.397227542439656,1.43418310374407,0.709336764396714,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,1.5608003841516,0,0.597794722207204,0.469737994575059,0,0.140450806702248,0.204154171254893,0.245668634623536,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.612975591598039,0.150238058906597,0,5.74046834204358,0.85422955527427,0.211931901159562,2.40072876867522,0.309157587715317,1.54584324027377,1.30281799432113,2.02531598689519,0.487185025805993,2.01947019395292,0.552299391853796,0.80823028409406,3.19508633264953,0.705264687593482,0.847802961552438,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0.473227200159376,0.337169380156203,0.723033089650446,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0.219500570817251,0,0.301586917234893,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0.702012795417713,1.0404181360211,0,0.16798212819886,0.283550194484773,0.268675568108545,0.581267877027924,0.766765358330422,0,0.704387472105808,2.69526550203004,0.720599767084807,0.6312121671319,0.380987365753014,0.763976851116555,1.17217447210047,0,0.719792448923265,0,3.14409075893636,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0.845302752556,0.531876233169741,2.08014873822732,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,1.58390374586686,0.301439377059586,0,1.19967589418468,0,1.00451418286425,4.21667878966063,0.239624855491583,0,0,0.289562613335158,1.02738161275192,0.358121926479791,0.112085143993527,0.197030760201927,0.431255149719035,0.513372145118994,1.52456774533478,1.30139853857622,0.773288812777695,0.335032530668698,1.91381625495949,0.749007023947182,5.9832291840805,0,0.24538298343828,0.500170521059677,0,1.66376689224646,1.42743191037729,1.10391690523754,0.468565659970853,0,0,1.03473071292505,1.99267679560631,0.184369168541703,0.434418072340414,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0.280660094433074,0,2.04682899626681,0.321707842287215,0,1.07946785661859,0.177561725313127,1.39616165223476,2.07701771673448,0.581051892299796,0,1.40354529212299,0.184161977871793,1.26295892981067,1.0925470080403,1.70461739447251,0,0.308061348417659,0,0,0.633309773357254,0,0,0.215915916102139,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,1.6068392984416,0.580024309752732,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.426133137080504,0.267096106940212,0.661139661443912,0.384380134730212,0.510450849978337,0,0.464845549297286,2.83331112147576,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0,0.855877976067841,0.636406495851874,0,0.719489830333259,0.274537029736055,0.353437207037059,0,0,0,0,1.94970791705028,1.05650146756755,1.50149902548784,1.69686518344455,1.13008116620243,0.551365343546124,1.99031692572366,0.876901770507525,1.15755106853338,0,0,0.30982349809975,0.281695602532241,0.860468113224309,0.196498082026242,0,0,4.85547561184627,2.63435914367922,0,0.349934720244983,0.0962221127255121,0,0,0,0.430505372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|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,1.04474251279935,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0.447830948479849,0,0.257575567634187,1.30858414901608,1.51150377475524,1.4555043671269,1.85943229524548,1.23350366406548,2.16794459626573,2.01384674625505,1.5369642391746,1.6553756092201,0,1.29096936716765,1.35426486594342,3.01187743268168,1.36453075028923,0.224723484445085,1.83650335422542,0.641858054152187,5.75403413219137,1.31940520074686,2.19410023383795,1.27867425159808,4.93355705668593,5.10646702222026,3.11411124497787,2.76373531782418,2.08593167368081,0.434377689410233,1.81619850790011,0.736555271975129,2.21523671208619,0.211255286311942,0,0,0.112328631146495,0.600707571366025,0.803627933485401,0,0.79566670879636,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,1.17447437874188,0.382273228125229,0,0,0,0.393419540227666,0.786021525498329,1.23360899399706,0.167186495390678,0,0,1.94826728407911,0.111410456885174,0.294605907474837,0.443067789167242,0.541607727530031,0.25618263945135,0.260118695119756,0.657751618414705,0,0,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,1.60464117470104,0,0,0,0.12786256184353,4.3372698286148,1.50401373190767,2.89693037921647,0,0.973269740605272,0,0.443458794925128,0.087834785693126,0,0.364295288292542,0,0.649094787309367,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.397227542439656,1.43418310374407,0.709336764396714,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,1.5608003841516,0,0.597794722207204,0.469737994575059,0,0.140450806702248,0.204154171254893,0.245668634623536,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.612975591598039,0.150238058906597,0,5.74046834204358,0.85422955527427,0.211931901159562,2.40072876867522,0.309157587715317,1.54584324027377,1.30281799432113,2.02531598689519,0.487185025805993,2.01947019395292,0.552299391853796,0.80823028409406,3.19508633264953,0.705264687593482,0.847802961552438,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0.473227200159376,0.337169380156203,0.723033089650446,0.110293972732394,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0.219500570817251,0,0.301586917234893,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.231860809950154,0,0.144366447761074,0,0,0,0,0,0.702012795417713,1.0404181360211,0,0.16798212819886,0.283550194484773,0.268675568108545,0.581267877027924,0.766765358330422,0,0.704387472105808,2.69526550203004,0.720599767084807,0.6312121671319,0.380987365753014,0.763976851116555,1.17217447210047,0,0.719792448923265,0,3.14409075893636,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0.845302752556,0.531876233169741,2.08014873822732,0,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0,0,1.58390374586686,0.301439377059586,0,1.19967589418468,0,1.00451418286425,4.21667878966063,0.239624855491583,0,0,0.289562613335158,1.02738161275192,0.358121926479791,0.112085143993527,0.197030760201927,0.431255149719035,0.513372145118994,1.52456774533478,1.30139853857622,0.773288812777695,0.335032530668698,1.91381625495949,0.749007023947182,5.9832291840805,0,0.24538298343828,0.500170521059677,0,1.66376689224646,1.42743191037729,1.10391690523754,0.468565659970853,0,0,1.03473071292505,1.99267679560631,0.184369168541703,0.434418072340414,0,0,0.206768026122887,0.647142602455851,0.320182673410333,0,0,0,0,0,0.280660094433074,0,2.04682899626681,0.321707842287215,0,1.07946785661859,0.177561725313127,1.39616165223476,2.07701771673448,0.581051892299796,0,1.40354529212299,0.184161977871793,1.26295892981067,1.0925470080403,1.70461739447251,0,0.308061348417659,0,0,0.633309773357254,0,0,0.215915916102139,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,1.6068392984416,0.580024309752732,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.426133137080504,0.267096106940212,0.661139661443912,0.384380134730212,0.510450849978337,0,0.464845549297286,2.83331112147576,0.6970372701606,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0,0.855877976067841,0.636406495851874,0,0.719489830333259,0.274537029736055,0.353437207037059,0,0,0,0,1.94970791705028,1.05650146756755,1.50149902548784,1.69686518344455,1.13008116620243,0.551365343546124,1.99031692572366,0.876901770507525,1.15755106853338,0,0,0.30982349809975,0.281695602532241,0.860468113224309,0.196498082026242,0,0,4.85547561184627,2.63435914367922,0,0.349934720244983,0.0962221127255121,0,0,0,0.430505372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| ||
|short_description=p22@CD44 | |short_description=p22@CD44 | ||
}} | }} |
Latest revision as of 19:55, 17 September 2015
Short description: | p22@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_CD44_5end |
Coexpression cluster: | NA |
Association with transcript: | 449bp_to_AB073901_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.00e-24 | 48 |
phagocyte | 2.00e-24 | 48 |
classical monocyte | 7.23e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.23e-23 | 42 |
macrophage dendritic cell progenitor | 6.53e-20 | 61 |
monopoietic cell | 2.86e-19 | 59 |
monocyte | 2.86e-19 | 59 |
monoblast | 2.86e-19 | 59 |
promonocyte | 2.86e-19 | 59 |
granulocyte monocyte progenitor cell | 6.09e-19 | 67 |
myeloid lineage restricted progenitor cell | 6.75e-18 | 66 |
myeloid leukocyte | 3.37e-17 | 72 |
myeloid cell | 1.62e-09 | 108 |
common myeloid progenitor | 1.62e-09 | 108 |
multi fate stem cell | 4.04e-09 | 427 |
hematopoietic lineage restricted progenitor cell | 4.83e-09 | 120 |
somatic stem cell | 9.90e-09 | 433 |
stem cell | 3.13e-08 | 441 |
nongranular leukocyte | 3.32e-08 | 115 |
mesenchymal cell | 5.13e-08 | 354 |
leukocyte | 9.57e-08 | 136 |
connective tissue cell | 1.48e-07 | 361 |
fibrocyte | 5.39e-07 | 3 |
tendon cell | 5.39e-07 | 3 |
motile cell | 7.67e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.13e-15 | 76 |
bone element | 6.64e-14 | 82 |
skeletal system | 6.18e-12 | 100 |
skeletal element | 6.25e-12 | 90 |
musculoskeletal system | 1.23e-11 | 167 |
immune system | 2.77e-11 | 93 |
hematopoietic system | 3.28e-11 | 98 |
blood island | 3.28e-11 | 98 |
hemolymphoid system | 2.04e-09 | 108 |
connective tissue | 8.97e-08 | 371 |
dense regular connective tissue | 5.39e-07 | 3 |
tendon | 5.39e-07 | 3 |
regular connective tissue | 5.39e-07 | 3 |