FFCP PHASE1:Hg19::chr11:64889773..64889820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=740 | |EntrezGene=740 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1176 | |HGNC=1176 | ||
|TSSclassifier=strong | |||
|UniProt=Q13405,E9PNF1,E9PI78,E9PRD2 | |UniProt=Q13405,E9PNF1,E9PI78,E9PRD2 | ||
|association_with_transcript=0bp_to_ENST00000279242,ENST00000526171,ENST00000526319,ENST00000531705,ENST00000534078_5end | |association_with_transcript=0bp_to_ENST00000279242,ENST00000526171,ENST00000526319,ENST00000531705,ENST00000534078_5end | ||
|cluster_id=chr11:64889773..64889820,+ | |||
|description=CAGE_peak_1_at_MRPL49_5end | |description=CAGE_peak_1_at_MRPL49_5end | ||
|id=chr11:64889773..64889820,+ | |id=chr11:64889773..64889820,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.82e-30!254;CL:0002321!1.42e-11!248;CL:0000220!2.41e-11!246;CL:1000497!1.11e-08!18;CL:0002518!1.11e-08!18;CL:0000548!1.56e-08!679;CL:0000004!1.56e-08!679;CL:0000255!1.56e-08!679;CL:0000012!7.18e-08!682;CL:1000449!8.24e-08!16;CL:0000076!4.12e-07!62;CL:0000003!5.67e-07!722 | |ontology_enrichment_celltype=CL:0000066!1.82e-30!254;CL:0002321!1.42e-11!248;CL:0000220!2.41e-11!246;CL:1000497!1.11e-08!18;CL:0002518!1.11e-08!18;CL:0000548!1.56e-08!679;CL:0000004!1.56e-08!679;CL:0000255!1.56e-08!679;CL:0000012!7.18e-08!682;CL:1000449!8.24e-08!16;CL:0000076!4.12e-07!62;CL:0000003!5.67e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.18e-09;17!CL:0002518;1.18e-09;17!CL:1000449;8.69e-09;15!CL:1000507;1.69e-07;10!CL:1000494;1.69e-07;10!CL:0002681;4.07e-07;12!CL:0002584;4.07e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.05e-31,253;CL:0002321,2.66e-11,250;CL:1000497,1.13e-09,17;CL:0002518,1.13e-09,17;CL:1000449,8.30e-09,15;CL:1000507,1.70e-07,10;CL:1000494,1.70e-07,10;CL:0002681,3.84e-07,12;CL:0002584,3.84e-07,12;CL:0000076,4.60e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.34e-13!106;DOID:0050687!1.24e-09!143;DOID:14566!1.82e-09!239;DOID:162!8.97e-09!235;DOID:299!4.90e-08!25 | |ontology_enrichment_disease=DOID:305!7.34e-13!106;DOID:0050687!1.24e-09!143;DOID:14566!1.82e-09!239;DOID:162!8.97e-09!235;DOID:299!4.90e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;4.98e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.34e-13,106;DOID:0050687,1.24e-09,143;DOID:14566,1.82e-09,239;DOID:162,8.97e-09,235;DOID:299,4.90e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0009569!1.48e-10!113;UBERON:0005177!6.79e-10!107;UBERON:0002113!1.08e-09!27;UBERON:0003918!1.08e-09!27;UBERON:0005095!1.08e-09!27;UBERON:0007687!1.08e-09!27;UBERON:0005172!7.29e-09!55;UBERON:0005173!7.29e-09!55;UBERON:0006554!8.07e-09!44;UBERON:0003104!1.22e-08!238;UBERON:0009142!1.22e-08!238;UBERON:0001008!3.20e-08!45;UBERON:0000058!3.47e-08!26;UBERON:0000080!7.83e-08!18;UBERON:0002120!7.83e-08!18;UBERON:0004875!7.83e-08!18;UBERON:0005721!7.83e-08!18;UBERON:0005754!7.83e-08!18;UBERON:0007297!7.83e-08!18;UBERON:0004211!8.24e-08!16;UBERON:0001285!8.24e-08!16;UBERON:0007684!8.24e-08!16;UBERON:0003220!8.24e-08!16;UBERON:0004208!8.24e-08!16;UBERON:0006555!9.37e-08!17;UBERON:0005103!9.37e-08!17;UBERON:0000083!9.37e-08!17;UBERON:0009201!9.37e-08!17;UBERON:0004819!9.37e-08!17;UBERON:0006553!9.37e-08!17;UBERON:0003074!9.37e-08!17;UBERON:0003060!9.37e-08!17;UBERON:0002417!1.66e-07!61;UBERON:0000916!1.66e-07!61;UBERON:0004119!1.74e-07!169;UBERON:0000925!1.74e-07!169;UBERON:0006595!1.74e-07!169;UBERON:0005085!1.90e-07!29;UBERON:0000489!2.66e-07!32;UBERON:0004876!3.96e-07!20;UBERON:0002100!7.77e-07!216 | |ontology_enrichment_uberon=UBERON:0009569!1.48e-10!113;UBERON:0005177!6.79e-10!107;UBERON:0002113!1.08e-09!27;UBERON:0003918!1.08e-09!27;UBERON:0005095!1.08e-09!27;UBERON:0007687!1.08e-09!27;UBERON:0005172!7.29e-09!55;UBERON:0005173!7.29e-09!55;UBERON:0006554!8.07e-09!44;UBERON:0003104!1.22e-08!238;UBERON:0009142!1.22e-08!238;UBERON:0001008!3.20e-08!45;UBERON:0000058!3.47e-08!26;UBERON:0000080!7.83e-08!18;UBERON:0002120!7.83e-08!18;UBERON:0004875!7.83e-08!18;UBERON:0005721!7.83e-08!18;UBERON:0005754!7.83e-08!18;UBERON:0007297!7.83e-08!18;UBERON:0004211!8.24e-08!16;UBERON:0001285!8.24e-08!16;UBERON:0007684!8.24e-08!16;UBERON:0003220!8.24e-08!16;UBERON:0004208!8.24e-08!16;UBERON:0006555!9.37e-08!17;UBERON:0005103!9.37e-08!17;UBERON:0000083!9.37e-08!17;UBERON:0009201!9.37e-08!17;UBERON:0004819!9.37e-08!17;UBERON:0006553!9.37e-08!17;UBERON:0003074!9.37e-08!17;UBERON:0003060!9.37e-08!17;UBERON:0002417!1.66e-07!61;UBERON:0000916!1.66e-07!61;UBERON:0004119!1.74e-07!169;UBERON:0000925!1.74e-07!169;UBERON:0006595!1.74e-07!169;UBERON:0005085!1.90e-07!29;UBERON:0000489!2.66e-07!32;UBERON:0004876!3.96e-07!20;UBERON:0002100!7.77e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.45e-12;30!UBERON:0001008;4.45e-12;30!UBERON:0002113;2.05e-10;24!UBERON:0011143;2.05e-10;24!UBERON:0006555;8.69e-09;15!UBERON:0004819;8.69e-09;15!UBERON:0001285;8.69e-09;15!UBERON:0007684;8.69e-09;15!UBERON:0000489;1.11e-07;29!UBERON:0004211;1.69e-07;10!UBERON:0009773;1.69e-07;10!UBERON:0001231;1.69e-07;10!UBERON:0004810;1.69e-07;10!UBERON:0001851;3.98e-07;15!UBERON:0001225;4.07e-07;12!UBERON:0008987;4.07e-07;12 | |||
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| ||
|short_description=p1@MRPL49 | |short_description=p1@MRPL49 | ||
}} | }} |
Latest revision as of 06:27, 19 September 2015
Short description: | p1@MRPL49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL49_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000279242, ENST00000526171, ENST00000526319, ENST00000531705, ENST00000534078_5end |
EntrezGene: | MRPL49 |
HGNC: | 1176 |
UniProt: | Q13405E9PNF1E9PI78E9PRD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.05e-31 | 253 |
embryonic cell | 2.66e-11 | 250 |
kidney cell | 1.13e-09 | 17 |
kidney epithelial cell | 1.13e-09 | 17 |
epithelial cell of nephron | 8.30e-09 | 15 |
kidney tubule cell | 1.70e-07 | 10 |
nephron tubule epithelial cell | 1.70e-07 | 10 |
kidney cortical cell | 3.84e-07 | 12 |
renal cortical epithelial cell | 3.84e-07 | 12 |
squamous epithelial cell | 4.60e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.91e-11 | 101 |
urinary system structure | 5.59e-11 | 47 |
subdivision of trunk | 1.37e-10 | 112 |
kidney | 1.70e-10 | 26 |
kidney mesenchyme | 1.70e-10 | 26 |
upper urinary tract | 1.70e-10 | 26 |
kidney rudiment | 1.70e-10 | 26 |
kidney field | 1.70e-10 | 26 |
renal system | 2.65e-10 | 48 |
abdomen element | 2.54e-09 | 54 |
abdominal segment element | 2.54e-09 | 54 |
nephron epithelium | 8.30e-09 | 15 |
renal tubule | 8.30e-09 | 15 |
nephron tubule | 8.30e-09 | 15 |
nephron | 8.30e-09 | 15 |
uriniferous tubule | 8.30e-09 | 15 |
nephrogenic mesenchyme | 8.30e-09 | 15 |
excretory tube | 1.06e-08 | 16 |
kidney epithelium | 1.06e-08 | 16 |
abdominal segment of trunk | 6.95e-08 | 60 |
abdomen | 6.95e-08 | 60 |
cavitated compound organ | 7.18e-08 | 31 |
trunk | 7.33e-08 | 199 |
nephron tubule epithelium | 1.70e-07 | 10 |
endoderm-derived structure | 2.44e-07 | 160 |
endoderm | 2.44e-07 | 160 |
presumptive endoderm | 2.44e-07 | 160 |
cortex of kidney | 3.84e-07 | 12 |
renal parenchyma | 3.84e-07 | 12 |
cortex | 3.90e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.34e-13 | 106 |
cell type cancer | 1.24e-09 | 143 |
disease of cellular proliferation | 1.82e-09 | 239 |
cancer | 8.97e-09 | 235 |
adenocarcinoma | 4.90e-08 | 25 |