FFCP PHASE1:Hg19::chr10:33269802..33269834,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:33269802..33269834,+
|short_description=p@chr10:33269802..33269834,+
|description=CAGE_peak_at_chr10:33269802..33269834,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:33269802..33269834,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:33269802..33269834,+ | |||
|id=chr10:33269802..33269834,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.20e-26!42;CL:0000860!7.50e-26!45;CL:0000012!2.65e-20!682;CL:0000548!3.54e-19!679;CL:0000004!3.54e-19!679;CL:0000255!3.54e-19!679;CL:0000063!1.18e-18!578;CL:0002371!1.52e-18!591;CL:0000144!2.94e-17!625;CL:0000766!5.72e-16!76;CL:0002194!1.03e-15!63;CL:0000576!1.03e-15!63;CL:0000040!1.03e-15!63;CL:0000559!1.03e-15!63;CL:0000557!1.37e-15!71;CL:0002009!1.57e-15!65;CL:0000839!4.18e-15!70;CL:0000003!1.00e-13!722;CL:0000723!1.77e-10!436;CL:0000048!3.16e-10!430;CL:0000034!3.61e-10!444;CL:0000134!1.32e-08!358;CL:0002320!3.95e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.01e-40;33!CL:0002057;4.01e-40;33!CL:0000473;8.32e-27;39!CL:0000234;8.32e-27;39!CL:0000576;1.90e-24;48!CL:0000766;5.21e-16;69!CL:0002393;4.68e-08;6!CL:0002397;4.68e-08;6!CL:0002087;2.99e-07;104!CL:0000763;4.66e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.83e-46,42;CL:0002057,2.83e-46,42;CL:0000473,1.54e-38,48;CL:0000234,1.54e-38,48;CL:0000766,8.79e-33,72;CL:0000557,8.08e-31,67;CL:0000839,7.76e-30,66;CL:0002009,1.06e-29,61;CL:0002194,1.92e-29,59;CL:0000576,1.92e-29,59;CL:0000040,1.92e-29,59;CL:0000559,1.92e-29,59;CL:0000738,2.54e-19,136;CL:0000763,2.51e-18,108;CL:0000049,2.51e-18,108;CL:0002087,3.50e-17,115;CL:0002031,8.79e-17,120;CL:0000037,7.83e-13,168;CL:0000034,8.37e-13,441;CL:0000723,1.43e-12,433;CL:0000048,3.42e-12,427;CL:0002032,6.73e-12,161;CL:0000837,6.73e-12,161;CL:0000988,2.61e-11,177;CL:0000134,6.14e-11,354;CL:0002320,3.14e-10,361;CL:0000219,3.67e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-33;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.02e-16!216;UBERON:0002371!1.76e-15!80;UBERON:0004765!7.86e-15!101;UBERON:0001434!7.86e-15!101;UBERON:0001474!1.06e-13!86;UBERON:0000055!7.09e-13!69;UBERON:0002204!7.44e-13!167;UBERON:0001981!1.27e-12!60;UBERON:0007500!1.27e-12!60;UBERON:0004537!1.27e-12!60;UBERON:0006965!1.27e-12!60;UBERON:0002405!6.22e-12!115;UBERON:0002049!7.55e-11!79;UBERON:0007798!7.55e-11!79;UBERON:0001637!8.27e-11!42;UBERON:0003509!8.27e-11!42;UBERON:0004572!8.27e-11!42;UBERON:0000926!3.47e-10!448;UBERON:0004120!3.47e-10!448;UBERON:0006603!3.47e-10!448;UBERON:0002193!1.76e-09!112;UBERON:0002390!2.84e-09!102;UBERON:0003061!2.84e-09!102;UBERON:0003914!1.21e-08!118;UBERON:0004573!1.83e-08!33;UBERON:0004571!1.83e-08!33;UBERON:0002384!5.43e-08!375;UBERON:0004872!1.19e-07!84;UBERON:0000467!3.07e-07!625;UBERON:0000480!4.50e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.30e-08;42!UBERON:0003509;4.30e-08;42!UBERON:0004572;4.30e-08;42!UBERON:0004573;6.59e-08;33!UBERON:0004571;6.59e-08;33!UBERON:0000947;3.83e-07;21!UBERON:0010191;3.83e-07;21!UBERON:0007500;3.86e-07;56!UBERON:0001981;3.86e-07;56!UBERON:0004537;3.86e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.72e-29,76;UBERON:0003081,3.98e-26,203;UBERON:0001474,8.14e-26,82;UBERON:0004765,3.03e-23,90;UBERON:0002405,3.71e-23,93;UBERON:0002390,1.42e-22,98;UBERON:0003061,1.42e-22,98;UBERON:0001434,3.01e-21,100;UBERON:0002193,5.53e-21,108;UBERON:0002204,2.04e-16,167;UBERON:0000926,1.09e-10,315;UBERON:0004120,1.09e-10,315;UBERON:0006603,1.09e-10,315;UBERON:0007500,8.19e-10,59;UBERON:0001981,8.19e-10,59;UBERON:0004537,8.19e-10,59;UBERON:0006965,8.19e-10,59;UBERON:0001637,1.16e-09,42;UBERON:0003509,1.16e-09,42;UBERON:0004572,1.16e-09,42;UBERON:0002384,1.18e-09,371;UBERON:0000055,5.05e-09,68;UBERON:0004573,1.81e-08,33;UBERON:0004571,1.81e-08,33;UBERON:0000947,4.43e-07,21;UBERON:0010191,4.43e-07,21;UBERON:0002049,7.69e-07,78;UBERON:0007798,7.69e-07,78 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.491467873003018,1.39560233594486,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0.602694528023977,2.19093027116212,0.975865597581014,0,0.816002764977012,0,0,0.410623275218653,0,0,0,0,12.5876568591649,7.67658796194425,18.1134864279809,2.75826367343678,3.0120591877825,2.58827807116751,0,0,0.880801318004542,47.0896097252096,37.3012672294464,44.7042393674655,0.223915474239924,0,0,6.54292074508041,5.29026321164333,7.03493777444667,22.7780456167571,10.2791972005456,24.1570969298181,24.7415457397049,15.369642391746,27.4319386670759,60.6752398096449,50.9932900031223,27.0852973188684,16.5653258797492,7.91427835167753,13.4834090667051,89.0704126799326,57.4462958466208,70.9664209636936,2.63881040149373,3.59034583718937,6.39337125799041,45.2726412260591,23.8301794370279,24.912889959823,17.587406567972,15.644487552606,31.0580047928317,15.7403870684676,31.303599058943,29.1145396445614,2.32380814943136,1.70083439972035,1.67726916406701,6.17807471305723,2.85336096398862,2.08943262706204,0.285012743741249,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,1.17447437874188,0.382273228125229,1.32171328579026,6.1655941927969,0.263384084775077,0.196709770113833,0.393010762749165,1.23360899399706,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0.68725489096526,1.26509846009751,0,0,0,0,0.255973222308837,1.24930726552346,0,0,1.20964045934839,1.87208137048455,0.724122019413995,0,0,0,0,0,0.434539556882471,0.795285947051099,4.37971383272372,0.0945348171640679,0.443458794925128,0.351339142772504,0.196468613246569,0.728590576585084,0,0,0.870648686496336,0,2.14641561874808,0,0.74291500265913,1.98762407366705,2.58070378531837,2.08284300964557,1.13061588384802,0.838998872419812,1.10047216776027,1.46296476575767,0.775250277507987,0,0.66944122552934,1.61131726843659,0.760272105718513,2.19655851793353,0.735326160691737,0,0.446498641420399,0.673588117878509,0.563057402416611,4.5994991239765,4.74632829784064,2.01521918323448,0,3.87780264148325,0.436094052142534,0.496971951695318,0.633152558322899,16.8159659632788,3.72887606973458,1.06400514659507,1.12135520028461,1.06748995729705,0.49333509683432,0,0,0.163461903113459,0.302714855289863,0.576175924479999,0,0.936480230490962,0.570471821544449,0.149448680551801,0.352303495931295,0.323745888736263,1.12360645361799,0.408308342509787,0.491337269247072,0.309977343527296,1.18800285728205,0.247266929278557,0.910161361938026,0.718618141816238,0.336672227908132,0.500474079487857,1.38532057742091,1.31693286264251,0.919463387397059,0.300476117813194,0.453728732640084,5.02290979928813,0.640672166455702,0.847727604638247,1.50045548042201,0.824420233907511,4.63752972082133,0.930584281657949,3.20675031258406,0.68205903612839,4.03894038790583,0.368199594569197,0.323292113637624,2.4850671476163,0.302256294682921,0.508681776931463,0.386521706326594,1.36373060295417,0.860413786167011,0,0,0,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,0.928735856063958,2.88751792667834,0.591534000199219,0.168584690078102,0.723033089650446,0.55146986366197,0.871517776369625,0.474541238222193,0.134831308160164,0.588664395376038,1.15424147083917,0.738155454624648,1.40241773803446,0.4115740113314,0,1.26755034821831,0,0,0,0.122988438543114,0,0.768251997860379,2.24803506515239,0.201057944823262,1.29623823221941,0.651616610620649,3.11980435583874,0,0.115930404975077,0.117408694235822,1.87676382089396,2.31492756288305,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,1.87467667973554,0.839910640994298,0.708875486211932,0.806026704325635,0.871901815541886,0.766765358330422,0,0.176096868026452,13.0616712790686,6.77363781059719,6.43836410474538,0.126995788584338,0.763976851116555,1.17217447210047,0,0.102827492703324,0.600686115687835,0.285826432630578,0.448524337381443,0,0.22001485746285,0.129271715757778,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0.532844358032199,0.428933980974443,0,0.823240336780769,0,1.42156779497018,2.37585561880029,1.20575750823834,0.871533458600294,0.499864955910285,0,0.502257091432126,0,0,0,0,1.30303176000821,0.205476322550383,0.895304816199478,0,3.15249216323084,1.50939302401662,3.85029108839245,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0.535286966391485,0.630809660135739,0.585707074963566,0,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,2.68798433959754,7.76571122947021,12.0602140317892,0.303127571446259,0,0,0.248107807818777,1.99500565274481,0,0,0,0.160853921143607,0,0.308419387605311,0.887808626565635,0.410635780069046,1.03850885836724,0.464841513839837,0.483437798366489,0.40101294060657,0,0.34444334449382,0.364182336013434,0,0,0.462092022626489,0.784349769176855,0,0.527758144464379,0,1.70093705276516,0,1.54227252690289,0.270946437543853,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0.515205058238611,0.183138929636687,0.24752849976176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| ||
|short_description=p@chr10:33269802..33269834,+ | |||
}} | }} |
Latest revision as of 13:20, 23 July 2015
Short description: | p@chr10:33269802..33269834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33269802..33269834, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.83e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-46 | 42 |
defensive cell | 1.54e-38 | 48 |
phagocyte | 1.54e-38 | 48 |
myeloid leukocyte | 8.79e-33 | 72 |
granulocyte monocyte progenitor cell | 8.08e-31 | 67 |
myeloid lineage restricted progenitor cell | 7.76e-30 | 66 |
macrophage dendritic cell progenitor | 1.06e-29 | 61 |
monopoietic cell | 1.92e-29 | 59 |
monocyte | 1.92e-29 | 59 |
monoblast | 1.92e-29 | 59 |
promonocyte | 1.92e-29 | 59 |
leukocyte | 2.54e-19 | 136 |
myeloid cell | 2.51e-18 | 108 |
common myeloid progenitor | 2.51e-18 | 108 |
nongranular leukocyte | 3.50e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 8.79e-17 | 120 |
hematopoietic stem cell | 7.83e-13 | 168 |
stem cell | 8.37e-13 | 441 |
somatic stem cell | 1.43e-12 | 433 |
multi fate stem cell | 3.42e-12 | 427 |
hematopoietic oligopotent progenitor cell | 6.73e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.73e-12 | 161 |
hematopoietic cell | 2.61e-11 | 177 |
mesenchymal cell | 6.14e-11 | 354 |
connective tissue cell | 3.14e-10 | 361 |
motile cell | 3.67e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.72e-29 | 76 |
lateral plate mesoderm | 3.98e-26 | 203 |
bone element | 8.14e-26 | 82 |
skeletal element | 3.03e-23 | 90 |
immune system | 3.71e-23 | 93 |
hematopoietic system | 1.42e-22 | 98 |
blood island | 1.42e-22 | 98 |
skeletal system | 3.01e-21 | 100 |
hemolymphoid system | 5.53e-21 | 108 |
musculoskeletal system | 2.04e-16 | 167 |
mesoderm | 1.09e-10 | 315 |
mesoderm-derived structure | 1.09e-10 | 315 |
presumptive mesoderm | 1.09e-10 | 315 |
epithelial tube open at both ends | 8.19e-10 | 59 |
blood vessel | 8.19e-10 | 59 |
blood vasculature | 8.19e-10 | 59 |
vascular cord | 8.19e-10 | 59 |
artery | 1.16e-09 | 42 |
arterial blood vessel | 1.16e-09 | 42 |
arterial system | 1.16e-09 | 42 |
connective tissue | 1.18e-09 | 371 |
vessel | 5.05e-09 | 68 |
systemic artery | 1.81e-08 | 33 |
systemic arterial system | 1.81e-08 | 33 |
aorta | 4.43e-07 | 21 |
aortic system | 4.43e-07 | 21 |
vasculature | 7.69e-07 | 78 |
vascular system | 7.69e-07 | 78 |