FFCP PHASE1:Hg19::chr17:1928607..1928617,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146760 | |EntrezGene=146760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21329 | |HGNC=21329 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UN2 | |UniProt=Q86UN2 | ||
|association_with_transcript=-429bp_to_ENST00000331238,NM_178568,uc002ftp.2_5end | |association_with_transcript=-429bp_to_ENST00000331238,NM_178568,uc002ftp.2_5end | ||
|cluster_id=chr17:1928607..1928617,- | |||
|coexpression_cluster_id=C3611 | |||
|description=CAGE_peak_3_at_RTN4RL1_5end | |description=CAGE_peak_3_at_RTN4RL1_5end | ||
|id=chr17:1928607..1928617,- | |id=chr17:1928607..1928617,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.92e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.07e-07,10;CL:0000541,5.07e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;9.78e-08;4!DOID:1612;9.78e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.28e-08,4;DOID:1612,9.28e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-30!115;UBERON:0000955!6.22e-22!69;UBERON:0006238!6.22e-22!69;UBERON:0001017!1.22e-21!82;UBERON:0001049!1.32e-21!57;UBERON:0005068!1.32e-21!57;UBERON:0006241!1.32e-21!57;UBERON:0007135!1.32e-21!57;UBERON:0005743!9.94e-21!86;UBERON:0002616!2.59e-20!59;UBERON:0003080!9.89e-20!42;UBERON:0002780!2.78e-19!41;UBERON:0001890!2.78e-19!41;UBERON:0006240!2.78e-19!41;UBERON:0002619!1.38e-18!22;UBERON:0000924!1.91e-17!173;UBERON:0006601!1.91e-17!173;UBERON:0004121!2.52e-17!169;UBERON:0000073!3.65e-17!94;UBERON:0001016!3.65e-17!94;UBERON:0001950!4.14e-17!20;UBERON:0001893!1.77e-16!34;UBERON:0003075!1.90e-16!86;UBERON:0007284!1.90e-16!86;UBERON:0002346!2.29e-16!90;UBERON:0001869!2.61e-16!32;UBERON:0002020!5.29e-16!34;UBERON:0003528!5.29e-16!34;UBERON:0000033!6.04e-16!123;UBERON:0002791!1.15e-15!33;UBERON:0000153!1.73e-15!129;UBERON:0007811!1.73e-15!129;UBERON:0000956!3.30e-15!25;UBERON:0000203!3.30e-15!25;UBERON:0003056!3.58e-13!61;UBERON:0000475!1.05e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.22e-37;22!UBERON:0001950;6.53e-34;20!UBERON:0000956;7.29e-32;25!UBERON:0000203;7.29e-32;25!UBERON:0001869;2.29e-27;32!UBERON:0002791;4.51e-25;32!UBERON:0001893;5.37e-25;34!UBERON:0003528;5.17e-23;34!UBERON:0002020;5.17e-23;34!UBERON:0002780;1.67e-21;41!UBERON:0001890;1.67e-21;41!UBERON:0000073;5.26e-15;53!UBERON:0002616;5.26e-15;53!UBERON:0000955;2.25e-12;68!UBERON:0000200;1.30e-11;6!UBERON:0002021;1.56e-10;5!UBERON:0001017;1.98e-10;75!UBERON:0001871;2.84e-10;6!UBERON:0004905;4.11e-10;8!UBERON:0000982;4.11e-10;8!UBERON:0004770;4.11e-10;8!UBERON:0001872;4.80e-10;5!UBERON:0000349;1.02e-09;5!UBERON:0001016;1.54e-09;83!UBERON:0011135;5.80e-09;5!UBERON:0002216;5.80e-09;5!UBERON:0011134;5.80e-09;5!UBERON:0002209;5.80e-09;5!UBERON:0002213;5.80e-09;5!UBERON:0007844;5.80e-09;5!UBERON:0011138;5.80e-09;5!UBERON:0001130;5.80e-09;5!UBERON:0001066;5.80e-09;5!UBERON:0001468;5.80e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,6.69e-37,22;UBERON:0001950,6.92e-34,20;UBERON:0000956,9.04e-32,25;UBERON:0000203,9.04e-32,25;UBERON:0002780,2.63e-31,41;UBERON:0001890,2.63e-31,41;UBERON:0003080,2.63e-31,41;UBERON:0006240,2.63e-31,41;UBERON:0001869,1.04e-30,32;UBERON:0001893,1.79e-28,34;UBERON:0002791,6.29e-28,32;UBERON:0003528,7.11e-26,34;UBERON:0002020,7.11e-26,34;UBERON:0000073,1.45e-25,53;UBERON:0002616,1.45e-25,53;UBERON:0001049,2.72e-25,56;UBERON:0005068,2.72e-25,56;UBERON:0006241,2.72e-25,56;UBERON:0007135,2.72e-25,56;UBERON:0000955,1.13e-23,68;UBERON:0006238,1.13e-23,68;UBERON:0001017,1.61e-23,81;UBERON:0003056,1.17e-22,61;UBERON:0001016,4.90e-20,89;UBERON:0003075,1.02e-17,82;UBERON:0007284,1.02e-17,82;UBERON:0002346,1.03e-17,86;UBERON:0010371,1.04e-17,104;UBERON:0007023,3.45e-16,114;UBERON:0004121,5.62e-14,171;UBERON:0000924,5.62e-14,171;UBERON:0006601,5.62e-14,171;UBERON:0000200,1.18e-11,6;UBERON:0002021,1.43e-10,5;UBERON:0001871,2.93e-10,6;UBERON:0010314,4.34e-10,132;UBERON:0004905,4.92e-10,8;UBERON:0000982,4.92e-10,8;UBERON:0004770,4.92e-10,8;UBERON:0001872,6.12e-10,5;UBERON:0011216,6.50e-10,223;UBERON:0000349,1.34e-09,5;UBERON:0011135,7.34e-09,5;UBERON:0002216,7.34e-09,5;UBERON:0011134,7.34e-09,5;UBERON:0002209,7.34e-09,5;UBERON:0002213,7.34e-09,5;UBERON:0005856,7.34e-09,5;UBERON:0005866,7.34e-09,5;UBERON:0005863,7.34e-09,5;UBERON:0007844,7.34e-09,5;UBERON:0011138,7.34e-09,5;UBERON:0001130,7.34e-09,5;UBERON:0001066,7.34e-09,5;UBERON:0001468,7.34e-09,5 | |||
|phase1_expression=0,1.92690471501885,0.422863212287913,0,0,0,0,0,1.82829939739887,0,0,0,0,1.60896258848061,3.31397375727916,0,0,0,0,0,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,4.34539556882471,0,0,0,0,0.087834785693126,0.785874452986276,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.454072282934794,0,0.234321431833797,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0.408308342509787,0,1.44656093646072,0,0,0,0,0,0,0,0.438977620880838,0.612975591598039,0,0,0.179389635688862,0,0,0,0,1.28820270022815,0.558350568994769,0,0.194874010322397,0.252433774244115,0.276149695926898,0,0.710019185033229,0.604512589365842,0,0,0,0,0.121973706129595,0.265059536642971,0.464775771478074,1.0366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,1.96565443335525,1.77236972004421,0,0.245976877086227,0,0.329250856225877,0,0.904760751704678,0.370353780634118,0,0,0,0,0,0,0,0,1.58040879591855,3.43394464837949,0,0,0,0,0,0,1.07470227243418,0.871901815541886,1.91691339582606,0,0,0,0.288239906833923,0.6312121671319,2.15892840593375,1.90994212779139,1.17217447210047,1.71072446022705,0.411309970813294,1.50171528921959,2.5724378936752,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,1.30139853857622,0,0.837581326671744,0,0,0,0,3.31267027641678,5.00170521059677,1.08506009479894,0,0,0,0,0.300946099727719,0,2.0694614258501,0,0.184369168541703,0,2.74121620447837,1.37257369524342,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,1.09883357782012,0.907604499126468,1.14853107599234,0.650060246036521,0,0,0.770243085573222,0.614014698904518,0,0.107420244868274,0.435050081742686,0,0,0,0.384380134730212,0,0.6069466851333,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,1.47775344708365,0,0,0,0.0962221127255121,0,0,0.470719003883896,0,1.68471475667626,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,5.12755541411871,0.962479855263359,0.245040215981032,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,1.36940807419915,0,2.50634477090067,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,2.99424864653152,0.73254089635947,0,0,0.852408440419239,0,0.296964680832639,0,8.94732882989668,4.07941307590487,0,0,0,0.996239941255349,0.276283915531148,1.25966373927138,0.102268682502155,0,0,0,0,0,0.394573622547734,0,0,7.75466196876175,3.24688343566479,7.98455192004777,8.07326059364223,2.0115799999125,0.724999575434793,0,0,0,1.03423011972439,0.291604613383254,0,0.885741385813839,0.60298219312704,1.52581736317083,0.774054819518572,1.47773809476774,4.60709334023342,0,1.53366118706464,0.230850775511391,0,0.46112780877612,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,1.87411556580271,0,0.19566461893209,0.728341138602278,3.15667522279512,0,7.65181904076225,1.76922422959766,0,0,1.32930774541437,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,5.87549926029384,0,0,3.35547218566157,0.195551382734803,0,1.06726497369676,0,0.72045208577053,0,0.171594997861965,0,0,0.235694034616795,0.407712618220842,0,0.203996435272644,0,0,0,0,0,0,0.837847203816763,0.458320848023367,0.717873024576814,0.998395002494955,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0,0.885847333632739,0,3.18091875923721,2.17925449778521,0.160753148465019,0,0,0.449947783103001,0.77380195455795,4.98146364595802,0.335434687599266,0.551639951094387,0.104909176269996,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0.326587360109409,0,0,0,0,1.02586563574658,2.65013777824443,0.258565912723101,0.39669780522807,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,2.1760712134779,0.2506898940227,0.612691153526923,1.96723578425883,0,2.65820453990096,7.44360215901975,4.13130071331449,0,0.665574309221114,0.372578417648301,0.138348634936231,0,1.81978941049977,0,0,0,3.04334160082733,0.149254802886874,0,0,0,0.754703705257725,3.55924488638614,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0,0,0,0,1.07453304648892,0.926404341482917,0,0.176689145945881,0,0,0,0,0,2.62691028688288,0,0,0.163565394255844,0.655219697692825,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.157265941855896,0,0.169732529954025,0,3.7180729277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| ||
|short_description=p3@RTN4RL1 | |short_description=p3@RTN4RL1 | ||
}} | }} |
Latest revision as of 23:48, 18 September 2015
Short description: | p3@RTN4RL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RTN4RL1_5end |
Coexpression cluster: | C3611_Mesenchymal_brain_pineal_amygdala_tenocyte_occipital_breast |
Association with transcript: | -429bp_to_ENST00000331238, NM_178568, uc002ftp.2_5end |
EntrezGene: | RTN4RL1 |
HGNC: | 21329 |
UniProt: | Q86UN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.07e-07 | 10 |
melanoblast | 5.07e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.28e-08 | 4 |
breast cancer | 9.28e-08 | 4 |