FFCP PHASE1:Hg19::chr12:108878159..108878160,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:108878159..108878160,+ | |||
|coexpression_cluster_id=C1160 | |||
|description=CAGE_peak_at_chr12:108878159..108878160,+ | |description=CAGE_peak_at_chr12:108878159..108878160,+ | ||
|id=chr12:108878159..108878160,+ | |id=chr12:108878159..108878160,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.10e-22!42;CL:0000860!2.28e-21!45;CL:0002009!5.05e-17!65;CL:0000839!8.14e-17!70;CL:0000557!9.49e-17!71;CL:0000763!4.03e-16!112;CL:0000049!4.03e-16!112;CL:0002194!2.90e-15!63;CL:0000576!2.90e-15!63;CL:0000040!2.90e-15!63;CL:0000559!2.90e-15!63;CL:0000766!1.34e-12!76;CL:0002032!1.36e-08!165;CL:0000837!1.36e-08!165;CL:0002031!2.51e-08!124;CL:0000037!1.17e-07!172;CL:0000566!1.17e-07!172;CL:0000988!6.87e-07!182 | |ontology_enrichment_celltype=CL:0002057!2.10e-22!42;CL:0000860!2.28e-21!45;CL:0002009!5.05e-17!65;CL:0000839!8.14e-17!70;CL:0000557!9.49e-17!71;CL:0000763!4.03e-16!112;CL:0000049!4.03e-16!112;CL:0002194!2.90e-15!63;CL:0000576!2.90e-15!63;CL:0000040!2.90e-15!63;CL:0000559!2.90e-15!63;CL:0000766!1.34e-12!76;CL:0002032!1.36e-08!165;CL:0000837!1.36e-08!165;CL:0002031!2.51e-08!124;CL:0000037!1.17e-07!172;CL:0000566!1.17e-07!172;CL:0000988!6.87e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.03e-10;2!CL:0001016;1.03e-10;2!CL:0000473;5.73e-10;39!CL:0000234;5.73e-10;39!CL:0000860;8.06e-09;33!CL:0002057;8.06e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.31e-10,2;CL:0001016,1.31e-10,2;CL:0000557,2.27e-10,67;CL:0002009,5.05e-10,61;CL:0000763,1.17e-09,108;CL:0000049,1.17e-09,108;CL:0000473,1.23e-09,48;CL:0000234,1.23e-09,48;CL:0000839,6.28e-09,66;CL:0000860,2.07e-07,42;CL:0002057,2.07e-07,42;CL:0002194,2.76e-07,59;CL:0000576,2.76e-07,59;CL:0000040,2.76e-07,59;CL:0000559,2.76e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;3.35e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.34e-15!80;UBERON:0001474!2.17e-13!86;UBERON:0004765!1.70e-12!101;UBERON:0001434!1.70e-12!101;UBERON:0002390!2.13e-09!102;UBERON:0003061!2.13e-09!102;UBERON:0002405!8.18e-09!115;UBERON:0002193!8.85e-09!112;UBERON:0002204!5.45e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.94e-10,76;UBERON:0004765,1.83e-09,90;UBERON:0001434,2.17e-09,100;UBERON:0001474,2.77e-09,82;UBERON:0002405,7.93e-08,93;UBERON:0002390,2.82e-07,98;UBERON:0003061,2.82e-07,98 | |||
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| ||
|short_description=p@chr12:108878159..108878160,+ | |short_description=p@chr12:108878159..108878160,+ | ||
}} | }} |
Latest revision as of 04:37, 24 July 2015
Short description: | p@chr12:108878159..108878160, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:108878159..108878160, + |
Coexpression cluster: | C1160_skeletal_acute_Monocytederived_hippocampus_medulla_optic_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.31e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.31e-10 | 2 |
granulocyte monocyte progenitor cell | 2.27e-10 | 67 |
macrophage dendritic cell progenitor | 5.05e-10 | 61 |
myeloid cell | 1.17e-09 | 108 |
common myeloid progenitor | 1.17e-09 | 108 |
defensive cell | 1.23e-09 | 48 |
phagocyte | 1.23e-09 | 48 |
myeloid lineage restricted progenitor cell | 6.28e-09 | 66 |
classical monocyte | 2.07e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.07e-07 | 42 |
monopoietic cell | 2.76e-07 | 59 |
monocyte | 2.76e-07 | 59 |
monoblast | 2.76e-07 | 59 |
promonocyte | 2.76e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.94e-10 | 76 |
skeletal element | 1.83e-09 | 90 |
skeletal system | 2.17e-09 | 100 |
bone element | 2.77e-09 | 82 |
immune system | 7.93e-08 | 93 |
hematopoietic system | 2.82e-07 | 98 |
blood island | 2.82e-07 | 98 |