FFCP PHASE1:Hg19::chr10:73848549..73848564,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:73848549..73848564,-
|short_description=p13@SPOCK2
|description=CAGE_peak_13_at_SPOCK2_5end
|association_with_transcript=-18bp_to_ENST00000373109,NM_00124...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9806 | |EntrezGene=9806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |HGNC=13564 | ||
|UniProt=A6NIR4, | |TSSclassifier=strong | ||
|UniProt=A6NIR4,Q92563 | |||
|association_with_transcript=-18bp_to_ENST00000373109,NM_001244950,uc001jso.1_5end | |||
|cluster_id=chr10:73848549..73848564,- | |||
|coexpression_cluster_id=C524 | |||
|description=CAGE_peak_13_at_SPOCK2_5end | |||
|id=chr10:73848549..73848564,- | |||
|ontology_enrichment_celltype=CL:0000242!9.22e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000650;7.09e-34;2!CL:1000500;7.09e-34;2!CL:1000618;7.09e-34;2!CL:1001318;7.09e-34;2!CL:0002173;7.09e-34;2!CL:0000669;1.71e-17;4!CL:1000746;2.04e-10;7!CL:1000612;2.04e-10;7!CL:1000415;8.69e-10;2!CL:0000123;1.64e-09;2!CL:0000242;1.64e-09;2!CL:1000507;1.47e-07;10!CL:1000494;1.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.39e-34,2;CL:1000500,8.39e-34,2;CL:1000618,8.39e-34,2;CL:1001318,8.39e-34,2;CL:0002173,8.39e-34,2;CL:0000669,1.86e-17,4;CL:1000746,2.14e-10,7;CL:1000612,2.14e-10,7;CL:1000415,8.69e-10,2;CL:0000242,1.33e-09,2;CL:1000507,1.52e-07,10;CL:1000494,1.52e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p13@SPOCK2 | |||
}} | }} |
Latest revision as of 05:07, 19 September 2015
Short description: | p13@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SPOCK2_5end |
Coexpression cluster: | C524_serous_endometrioid_endometrial_mesothelioma_gall_clear_papillotubular |
Association with transcript: | -18bp_to_ENST00000373109, NM_001244950, uc001jso.1_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | A6NIR4Q92563 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.39e-34 | 2 |
kidney interstitial cell | 8.39e-34 | 2 |
juxtaglomerular complex cell | 8.39e-34 | 2 |
renal interstitial pericyte | 8.39e-34 | 2 |
extraglomerular mesangial cell | 8.39e-34 | 2 |
pericyte cell | 1.86e-17 | 4 |
glomerular cell | 2.14e-10 | 7 |
kidney corpuscule cell | 2.14e-10 | 7 |
epithelial cell of gall bladder | 8.69e-10 | 2 |
Merkel cell | 1.33e-09 | 2 |
kidney tubule cell | 1.52e-07 | 10 |
nephron tubule epithelial cell | 1.52e-07 | 10 |