FFCP PHASE1:Hg19::chr10:79006927..79006932,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:79006927..79006932,-
|short_description=p@chr10:79006927..79006932,-
|description=CAGE_peak_at_chr10:79006927..79006932,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:79006927..79006932,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:79006927..79006932,- | |||
|id=chr10:79006927..79006932,- | |||
|ontology_enrichment_celltype=CL:0000860!4.54e-48!45;CL:0002057!2.79e-47!42;CL:0002194!2.01e-35!63;CL:0000576!2.01e-35!63;CL:0000040!2.01e-35!63;CL:0000559!2.01e-35!63;CL:0002009!3.47e-34!65;CL:0000839!2.12e-31!70;CL:0000766!2.70e-31!76;CL:0000557!6.88e-31!71;CL:0002087!5.86e-20!119;CL:0000763!1.49e-19!112;CL:0000049!1.49e-19!112;CL:0000738!1.06e-17!140;CL:0002031!1.57e-15!124;CL:0000037!2.45e-13!172;CL:0000566!2.45e-13!172;CL:0000988!2.74e-12!182;CL:0002032!1.45e-11!165;CL:0000837!1.45e-11!165;CL:0002393!9.34e-09!9;CL:0002397!9.34e-09!9;CL:0000842!1.26e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-26;33!CL:0002057;1.39e-26;33!CL:0000473;1.55e-16;39!CL:0000234;1.55e-16;39!CL:0000576;1.24e-11;48!CL:0002087;4.05e-08;104!CL:0000226;7.26e-08;3!CL:0000842;7.26e-08;3!CL:0002592;7.26e-08;3!CL:0000766;5.84e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.68e-23,42;CL:0002057,5.68e-23,42;CL:0000473,4.36e-20,48;CL:0000234,4.36e-20,48;CL:0002194,4.85e-16,59;CL:0000576,4.85e-16,59;CL:0000040,4.85e-16,59;CL:0000559,4.85e-16,59;CL:0002009,1.62e-15,61;CL:0000839,2.41e-14,66;CL:0000557,3.94e-14,67;CL:0000766,3.78e-13,72;CL:0002087,1.23e-10,115;CL:0000738,6.11e-09,136;CL:0000763,1.02e-08,108;CL:0000049,1.02e-08,108;CL:0000226,6.34e-08,3;CL:0000842,6.34e-08,3;CL:0002592,6.78e-08,3;CL:0002031,8.06e-08,120;CL:0000037,3.70e-07,168;CL:0000988,9.05e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.85e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.36e-27!80;UBERON:0001474!1.23e-24!86;UBERON:0002390!3.33e-24!102;UBERON:0003061!3.33e-24!102;UBERON:0004765!3.24e-22!101;UBERON:0001434!3.24e-22!101;UBERON:0002193!1.50e-21!112;UBERON:0002405!3.82e-17!115;UBERON:0002204!3.18e-15!167;UBERON:0003081!5.03e-15!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;7.26e-08;3!UBERON:0005985;7.26e-08;3!UBERON:0001621;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-12,98;UBERON:0003061,1.58e-12,98;UBERON:0002371,1.87e-12,76;UBERON:0001474,1.55e-11,82;UBERON:0002193,2.41e-11,108;UBERON:0004765,1.69e-10,90;UBERON:0002405,3.72e-10,93;UBERON:0001434,1.97e-09,100;UBERON:0003081,2.88e-09,203;UBERON:0001621,6.78e-08,3;UBERON:0002204,3.37e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,4.7296445977717,0.689491361473237,0,2.70852973188684,0,0,0.674170453335254,0.306083892370903,0.962787081228281,5.11469700639233,0,0,0.426224750532694,0.870627715885752,0.56738522469114,6.85104473895132,0,0,0.65156653411535,1.21079900526674,1.47311054395026,10.7597211729901,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0,4.7296445977717,0.689491361473237,0,2.70852973188684,0,0,0.674170453335254,0.306083892370903,0.962787081228281,5.11469700639233,0,0,0.426224750532694,0.870627715885752,0.56738522469114,6.85104473895132,0,0,0.65156653411535,1.21079900526674,1.47311054395026,10.7597211729901,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:79006927..79006932,- | |||
}} | }} |
Latest revision as of 15:46, 23 July 2015
Short description: | p@chr10:79006927..79006932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:79006927..79006932, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.68e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.68e-23 | 42 |
defensive cell | 4.36e-20 | 48 |
phagocyte | 4.36e-20 | 48 |
monopoietic cell | 4.85e-16 | 59 |
monocyte | 4.85e-16 | 59 |
monoblast | 4.85e-16 | 59 |
promonocyte | 4.85e-16 | 59 |
macrophage dendritic cell progenitor | 1.62e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.41e-14 | 66 |
granulocyte monocyte progenitor cell | 3.94e-14 | 67 |
myeloid leukocyte | 3.78e-13 | 72 |
nongranular leukocyte | 1.23e-10 | 115 |
leukocyte | 6.11e-09 | 136 |
myeloid cell | 1.02e-08 | 108 |
common myeloid progenitor | 1.02e-08 | 108 |
single nucleate cell | 6.34e-08 | 3 |
mononuclear cell | 6.34e-08 | 3 |
smooth muscle cell of the coronary artery | 6.78e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.06e-08 | 120 |
hematopoietic stem cell | 3.70e-07 | 168 |
hematopoietic cell | 9.05e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.58e-12 | 98 |
blood island | 1.58e-12 | 98 |
bone marrow | 1.87e-12 | 76 |
bone element | 1.55e-11 | 82 |
hemolymphoid system | 2.41e-11 | 108 |
skeletal element | 1.69e-10 | 90 |
immune system | 3.72e-10 | 93 |
skeletal system | 1.97e-09 | 100 |
lateral plate mesoderm | 2.88e-09 | 203 |
coronary artery | 6.78e-08 | 3 |
musculoskeletal system | 3.37e-07 | 167 |