FFCP PHASE1:Hg19::chr12:53835539..53835556,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54458 | |EntrezGene=54458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24528 | |HGNC=24528 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZP4,F8W1R5 | |UniProt=F8VZP4,F8W1R5 | ||
|association_with_transcript=0bp_to_ENST00000379786,ENST00000547368,ENST00000551945_5end | |association_with_transcript=0bp_to_ENST00000379786,ENST00000547368,ENST00000551945_5end | ||
|cluster_id=chr12:53835539..53835556,+ | |||
|description=CAGE_peak_2_at_PRR13_5end | |description=CAGE_peak_2_at_PRR13_5end | ||
|id=chr12:53835539..53835556,+ | |id=chr12:53835539..53835556,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.16e-17!112;CL:0000049!1.16e-17!112;CL:0002032!6.43e-17!165;CL:0000837!6.43e-17!165;CL:0000766!9.47e-16!76;CL:0000037!1.54e-15!172;CL:0000566!1.54e-15!172;CL:0000738!3.35e-14!140;CL:0000988!2.58e-13!182;CL:0000557!4.74e-13!71;CL:0002009!2.11e-12!65;CL:0000839!4.43e-12!70;CL:0002194!7.73e-12!63;CL:0000576!7.73e-12!63;CL:0000040!7.73e-12!63;CL:0000559!7.73e-12!63;CL:0002031!1.29e-11!124;CL:0000860!3.25e-11!45;CL:0002057!3.32e-11!42;CL:0002087!5.74e-10!119;CL:0000063!2.47e-07!578;CL:0000003!2.57e-07!722 | |ontology_enrichment_celltype=CL:0000763!1.16e-17!112;CL:0000049!1.16e-17!112;CL:0002032!6.43e-17!165;CL:0000837!6.43e-17!165;CL:0000766!9.47e-16!76;CL:0000037!1.54e-15!172;CL:0000566!1.54e-15!172;CL:0000738!3.35e-14!140;CL:0000988!2.58e-13!182;CL:0000557!4.74e-13!71;CL:0002009!2.11e-12!65;CL:0000839!4.43e-12!70;CL:0002194!7.73e-12!63;CL:0000576!7.73e-12!63;CL:0000040!7.73e-12!63;CL:0000559!7.73e-12!63;CL:0002031!1.29e-11!124;CL:0000860!3.25e-11!45;CL:0002057!3.32e-11!42;CL:0002087!5.74e-10!119;CL:0000063!2.47e-07!578;CL:0000003!2.57e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-09;33!CL:0002057;1.92e-09;33!CL:0000473;6.25e-09;39!CL:0000234;6.25e-09;39!CL:0000576;4.14e-08;48!CL:0000766;1.41e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.51e-18,108;CL:0000049,6.51e-18,108;CL:0002032,5.30e-17,161;CL:0000837,5.30e-17,161;CL:0000766,3.97e-16,72;CL:0000037,1.35e-15,168;CL:0000738,2.83e-14,136;CL:0000988,9.29e-14,177;CL:0000557,2.15e-13,67;CL:0002009,9.78e-13,61;CL:0000473,1.49e-12,48;CL:0000234,1.49e-12,48;CL:0000839,2.32e-12,66;CL:0002194,3.65e-12,59;CL:0000576,3.65e-12,59;CL:0000040,3.65e-12,59;CL:0000559,3.65e-12,59;CL:0002031,1.11e-11,120;CL:0000860,3.30e-11,42;CL:0002057,3.30e-11,42;CL:0002087,5.17e-10,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.17e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.75e-12!80;UBERON:0004765!4.26e-11!101;UBERON:0001434!4.26e-11!101;UBERON:0001474!5.20e-11!86;UBERON:0002204!4.99e-09!167;UBERON:0002405!3.59e-08!115;UBERON:0002390!1.58e-07!102;UBERON:0003061!1.58e-07!102;UBERON:0001737!2.32e-07!9 | |ontology_enrichment_uberon=UBERON:0002371!1.75e-12!80;UBERON:0004765!4.26e-11!101;UBERON:0001434!4.26e-11!101;UBERON:0001474!5.20e-11!86;UBERON:0002204!4.99e-09!167;UBERON:0002405!3.59e-08!115;UBERON:0002390!1.58e-07!102;UBERON:0003061!1.58e-07!102;UBERON:0001737!2.32e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.04e-07;9!UBERON:0001557;2.04e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.58e-13,76;UBERON:0001474,3.41e-11,82;UBERON:0004765,4.80e-11,90;UBERON:0001434,1.80e-10,100;UBERON:0002405,7.19e-10,93;UBERON:0002204,3.06e-08,167;UBERON:0002390,1.46e-07,98;UBERON:0003061,1.46e-07,98;UBERON:0001737,2.31e-07,9 | |||
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| ||
|short_description=p2@PRR13 | |short_description=p2@PRR13 | ||
}} | }} |
Latest revision as of 03:08, 19 September 2015
Short description: | p2@PRR13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRR13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000379786, ENST00000547368, ENST00000551945_5end |
EntrezGene: | PRR13 |
HGNC: | 24528 |
UniProt: | F8VZP4F8W1R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.51e-18 | 108 |
common myeloid progenitor | 6.51e-18 | 108 |
hematopoietic oligopotent progenitor cell | 5.30e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.30e-17 | 161 |
myeloid leukocyte | 3.97e-16 | 72 |
hematopoietic stem cell | 1.35e-15 | 168 |
leukocyte | 2.83e-14 | 136 |
hematopoietic cell | 9.29e-14 | 177 |
granulocyte monocyte progenitor cell | 2.15e-13 | 67 |
macrophage dendritic cell progenitor | 9.78e-13 | 61 |
defensive cell | 1.49e-12 | 48 |
phagocyte | 1.49e-12 | 48 |
myeloid lineage restricted progenitor cell | 2.32e-12 | 66 |
monopoietic cell | 3.65e-12 | 59 |
monocyte | 3.65e-12 | 59 |
monoblast | 3.65e-12 | 59 |
promonocyte | 3.65e-12 | 59 |
hematopoietic lineage restricted progenitor cell | 1.11e-11 | 120 |
classical monocyte | 3.30e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.30e-11 | 42 |
nongranular leukocyte | 5.17e-10 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.58e-13 | 76 |
bone element | 3.41e-11 | 82 |
skeletal element | 4.80e-11 | 90 |
skeletal system | 1.80e-10 | 100 |
immune system | 7.19e-10 | 93 |
musculoskeletal system | 3.06e-08 | 167 |
hematopoietic system | 1.46e-07 | 98 |
blood island | 1.46e-07 | 98 |
larynx | 2.31e-07 | 9 |