FFCP PHASE1:Hg19::chr17:9939997..9940009,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8522 | |EntrezGene=8522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |HGNC=4169 | ||
|TSSclassifier=strong | |||
|UniProt=A8KAC2,O60861 | |UniProt=A8KAC2,O60861 | ||
|association_with_transcript=54bp_to_ENST00000396115,NM_201432,uc002gmj.1_5end | |association_with_transcript=54bp_to_ENST00000396115,NM_201432,uc002gmj.1_5end | ||
|cluster_id=chr17:9939997..9940009,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_19_at_GAS7_5end | |description=CAGE_peak_19_at_GAS7_5end | ||
|id=chr17:9939997..9940009,- | |id=chr17:9939997..9940009,- | ||
|ontology_enrichment_celltype=CL:0000148!5.94e-07!10;CL:0000541!5.94e-07!10 | |ontology_enrichment_celltype=CL:0000148!5.94e-07!10;CL:0000541!5.94e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.32e-11;10!CL:0000147;9.98e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.74e-11,10;CL:0000541,3.74e-11,10;CL:0000147,9.05e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.11e-15;82!UBERON:0006241;3.30e-11;3!UBERON:0003057;3.30e-11;3!UBERON:0005062;1.68e-08;4!UBERON:0007284;1.68e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.20e-08;2!DOID:114;4.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.51e-08,2;DOID:114,5.13e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.13e-71!115;UBERON:0001049!2.61e-36!57;UBERON:0005068!2.61e-36!57;UBERON:0006241!2.61e-36!57;UBERON:0007135!2.61e-36!57;UBERON:0002616!1.95e-28!59;UBERON:0003075!6.36e-28!86;UBERON:0007284!6.36e-28!86;UBERON:0002780!1.70e-26!41;UBERON:0001890!1.70e-26!41;UBERON:0006240!1.70e-26!41;UBERON:0001017!4.48e-26!82;UBERON:0002346!5.39e-26!90;UBERON:0005743!1.22e-25!86;UBERON:0003080!1.23e-25!42;UBERON:0000955!4.45e-25!69;UBERON:0006238!4.45e-25!69;UBERON:0000073!2.93e-23!94;UBERON:0001016!2.93e-23!94;UBERON:0002020!1.95e-22!34;UBERON:0003528!1.95e-22!34;UBERON:0001893!2.69e-22!34;UBERON:0002791!4.03e-21!33;UBERON:0001869!1.45e-19!32;UBERON:0002619!2.02e-16!22;UBERON:0003056!5.09e-16!61;UBERON:0001950!5.28e-14!20;UBERON:0000956!6.73e-14!25;UBERON:0000203!6.73e-14!25;UBERON:0004121!1.49e-13!169;UBERON:0000153!1.61e-13!129;UBERON:0007811!1.61e-13!129;UBERON:0000033!3.10e-13!123;UBERON:0000924!7.06e-13!173;UBERON:0006601!7.06e-13!173;UBERON:0003076!1.07e-11!15;UBERON:0003057!1.07e-11!15;UBERON:0000062!3.11e-11!511;UBERON:0002308!1.19e-10!9;UBERON:0000125!1.19e-10!9;UBERON:0000025!1.25e-10!194;UBERON:0002298!1.95e-10!8;UBERON:0004732!4.33e-09!13;UBERON:0004111!8.52e-09!241;UBERON:0002420!6.89e-08!9;UBERON:0007245!6.89e-08!9;UBERON:0010009!6.89e-08!9;UBERON:0010011!6.89e-08!9;UBERON:0000454!6.89e-08!9;UBERON:0004733!9.07e-08!12;UBERON:0002028!9.07e-08!12;UBERON:0007277!9.07e-08!12;UBERON:0009663!1.06e-07!7;UBERON:0000477!6.72e-07!286;UBERON:0001871!9.20e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.88e-29;41!UBERON:0001890;7.88e-29;41!UBERON:0002619;1.30e-27;22!UBERON:0000073;1.56e-27;53!UBERON:0002616;1.56e-27;53!UBERON:0001893;5.21e-26;34!UBERON:0003528;3.71e-25;34!UBERON:0002020;3.71e-25;34!UBERON:0000956;5.35e-24;25!UBERON:0000203;5.35e-24;25!UBERON:0002791;1.10e-23;32!UBERON:0001869;2.01e-23;32!UBERON:0001950;1.02e-22;20!UBERON:0002298;1.42e-20;6!UBERON:0007023;9.97e-15;114!UBERON:0001017;1.40e-14;75!UBERON:0001016;1.11e-13;83!UBERON:0007100;2.56e-13;25!UBERON:0004732;2.49e-12;13!UBERON:0000955;2.98e-12;68!UBERON:0000988;1.88e-11;3!UBERON:0003978;3.25e-11;3!UBERON:0000946;3.25e-11;3!UBERON:0002240;3.30e-11;3!UBERON:0005174;3.30e-11;3!UBERON:0001137;3.30e-11;3!UBERON:0001896;7.38e-11;3!UBERON:0005290;7.38e-11;3!UBERON:0000349;1.71e-10;5!UBERON:0004151;4.27e-10;3!UBERON:0004733;6.63e-10;12!UBERON:0002028;6.63e-10;12!UBERON:0000125;1.72e-09;9!UBERON:0002308;1.72e-09;9!UBERON:0005162;2.25e-08;2!UBERON:0000122;2.25e-08;2!UBERON:0000200;2.37e-08;6!UBERON:0000948;2.71e-08;22!UBERON:0002148;3.42e-08;2!UBERON:0006331;3.42e-08;2!UBERON:0009662;3.42e-08;2!UBERON:0002784;3.97e-08;4!UBERON:0002133;4.82e-08;2!UBERON:0001897;5.16e-08;2!UBERON:0010225;5.16e-08;2!UBERON:0001894;6.37e-08;7!UBERON:0001871;1.67e-07;6!UBERON:0001954;2.19e-07;2!UBERON:0002081;2.19e-07;2!UBERON:0003022;2.19e-07;2!UBERON:0002421;2.19e-07;2!UBERON:0002600;2.19e-07;2!UBERON:0010314;4.69e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.98e-55,56;UBERON:0005068,2.98e-55,56;UBERON:0006241,2.98e-55,56;UBERON:0007135,2.98e-55,56;UBERON:0007023,2.27e-50,114;UBERON:0003075,8.34e-49,82;UBERON:0007284,8.34e-49,82;UBERON:0000073,1.87e-47,53;UBERON:0002616,1.87e-47,53;UBERON:0002346,4.20e-46,86;UBERON:0010371,2.81e-41,104;UBERON:0001017,4.51e-40,81;UBERON:0002780,1.21e-38,41;UBERON:0001890,1.21e-38,41;UBERON:0003080,1.21e-38,41;UBERON:0006240,1.21e-38,41;UBERON:0010314,8.86e-38,132;UBERON:0001016,9.51e-38,89;UBERON:0000955,1.85e-37,68;UBERON:0006238,1.85e-37,68;UBERON:0003528,2.12e-32,34;UBERON:0002020,2.12e-32,34;UBERON:0001893,3.75e-32,34;UBERON:0003056,6.16e-29,61;UBERON:0002619,8.80e-28,22;UBERON:0002791,2.22e-27,32;UBERON:0001869,4.89e-27,32;UBERON:0000956,3.80e-24,25;UBERON:0000203,3.80e-24,25;UBERON:0004121,1.39e-23,171;UBERON:0000924,1.39e-23,171;UBERON:0006601,1.39e-23,171;UBERON:0001950,6.24e-23,20;UBERON:0002298,1.78e-20,6;UBERON:0000025,6.08e-20,192;UBERON:0003076,2.99e-17,15;UBERON:0003057,2.99e-17,15;UBERON:0004111,7.62e-15,240;UBERON:0000483,9.65e-13,306;UBERON:0000119,1.64e-12,309;UBERON:0004732,2.76e-12,13;UBERON:0007100,3.52e-12,27;UBERON:0011216,1.55e-11,223;UBERON:0000988,1.74e-11,3;UBERON:0003978,2.71e-11,3;UBERON:0009751,2.71e-11,3;UBERON:0000946,2.71e-11,3;UBERON:0002523,2.71e-11,3;UBERON:0005983,2.71e-11,3;UBERON:0002165,2.71e-11,3;UBERON:0002062,2.71e-11,3;UBERON:0007280,2.71e-11,3;UBERON:0002240,3.00e-11,3;UBERON:0005174,3.00e-11,3;UBERON:0001137,3.00e-11,3;UBERON:0001896,9.98e-11,3;UBERON:0005290,9.98e-11,3;UBERON:0010096,9.98e-11,3;UBERON:0000349,1.51e-10,5;UBERON:0004151,2.83e-10,3;UBERON:0004733,7.38e-10,12;UBERON:0002028,7.38e-10,12;UBERON:0007277,7.38e-10,12;UBERON:0000125,1.25e-09,9;UBERON:0002308,1.25e-09,9;UBERON:0000200,1.69e-08,6;UBERON:0005162,2.18e-08,2;UBERON:0000122,2.18e-08,2;UBERON:0002148,3.31e-08,2;UBERON:0006331,3.31e-08,2;UBERON:0009662,3.31e-08,2;UBERON:0002133,4.07e-08,2;UBERON:0001897,5.00e-08,2;UBERON:0010225,5.00e-08,2;UBERON:0002784,5.40e-08,4;UBERON:0001894,8.23e-08,7;UBERON:0006222,8.23e-08,7;UBERON:0000948,1.71e-07,24;UBERON:0005498,1.71e-07,24;UBERON:0004140,1.71e-07,24;UBERON:0009881,1.71e-07,24;UBERON:0004141,1.71e-07,24;UBERON:0003084,1.71e-07,24;UBERON:0007005,1.71e-07,24;UBERON:0004139,1.71e-07,24;UBERON:0004291,1.71e-07,24;UBERON:0001871,1.89e-07,6;UBERON:0002081,2.23e-07,2;UBERON:0010227,2.23e-07,2;UBERON:0001954,2.71e-07,2;UBERON:0003022,2.71e-07,2;UBERON:0002421,2.71e-07,2;UBERON:0002600,2.71e-07,2;UBERON:0003103,2.98e-07,68 | |||
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|short_description=p19@GAS7 | |short_description=p19@GAS7 | ||
}} | }} |
Latest revision as of 17:36, 18 September 2015
Short description: | p19@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_GAS7_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 54bp_to_ENST00000396115, NM_201432, uc002gmj.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | A8KAC2O60861 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.74e-11 | 10 |
melanoblast | 3.74e-11 | 10 |
pigment cell | 9.05e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.51e-08 | 2 |
heart disease | 5.13e-07 | 2 |