FFCP PHASE1:Hg19::chr12:72148728..72148739,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23011 | |EntrezGene=23011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18263 | |HGNC=18263 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL25 | |UniProt=Q9UL25 | ||
|association_with_transcript=70bp_to_NM_014999,uc001swt.2_5end | |association_with_transcript=70bp_to_NM_014999,uc001swt.2_5end | ||
|cluster_id=chr12:72148728..72148739,+ | |||
|coexpression_cluster_id=C1685 | |||
|description=CAGE_peak_3_at_RAB21_5end | |description=CAGE_peak_3_at_RAB21_5end | ||
|id=chr12:72148728..72148739,+ | |id=chr12:72148728..72148739,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.00e-22!42;CL:0000738!1.34e-21!140;CL:0000766!2.02e-20!76;CL:0000860!6.88e-20!45;CL:0000557!8.64e-17!71;CL:0002009!9.16e-16!65;CL:0000839!1.04e-15!70;CL:0002031!3.11e-15!124;CL:0002194!1.34e-14!63;CL:0000576!1.34e-14!63;CL:0000040!1.34e-14!63;CL:0000559!1.34e-14!63;CL:0000037!2.77e-14!172;CL:0000566!2.77e-14!172;CL:0002087!7.16e-14!119;CL:0000988!1.08e-13!182;CL:0002032!2.87e-13!165;CL:0000837!2.87e-13!165;CL:0000763!8.67e-13!112;CL:0000049!8.67e-13!112;CL:0000048!1.74e-07!430;CL:0000134!1.91e-07!358;CL:0000723!2.09e-07!436;CL:0002320!3.83e-07!365;CL:0000034!4.25e-07!444 | |ontology_enrichment_celltype=CL:0002057!7.00e-22!42;CL:0000738!1.34e-21!140;CL:0000766!2.02e-20!76;CL:0000860!6.88e-20!45;CL:0000557!8.64e-17!71;CL:0002009!9.16e-16!65;CL:0000839!1.04e-15!70;CL:0002031!3.11e-15!124;CL:0002194!1.34e-14!63;CL:0000576!1.34e-14!63;CL:0000040!1.34e-14!63;CL:0000559!1.34e-14!63;CL:0000037!2.77e-14!172;CL:0000566!2.77e-14!172;CL:0002087!7.16e-14!119;CL:0000988!1.08e-13!182;CL:0002032!2.87e-13!165;CL:0000837!2.87e-13!165;CL:0000763!8.67e-13!112;CL:0000049!8.67e-13!112;CL:0000048!1.74e-07!430;CL:0000134!1.91e-07!358;CL:0000723!2.09e-07!436;CL:0002320!3.83e-07!365;CL:0000034!4.25e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.36e-31;33!CL:0002057;8.36e-31;33!CL:0000473;1.17e-23;39!CL:0000234;1.17e-23;39!CL:0000576;2.97e-19;48!CL:0000766;3.96e-17;69!CL:0000094;2.23e-12;8!CL:0000081;5.00e-11;11!CL:0002087;7.41e-09;104!CL:0000763;1.49e-08;100!CL:0000738;3.22e-08;136!CL:0002393;7.31e-07;6!CL:0002397;7.31e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.18e-37,42;CL:0002057,3.18e-37,42;CL:0000766,3.36e-37,72;CL:0000738,1.16e-36,136;CL:0000473,2.80e-35,48;CL:0000234,2.80e-35,48;CL:0000557,6.45e-30,67;CL:0002009,1.90e-28,61;CL:0000988,7.76e-28,177;CL:0000037,8.63e-27,168;CL:0000839,1.05e-26,66;CL:0000763,2.51e-26,108;CL:0000049,2.51e-26,108;CL:0002194,8.12e-26,59;CL:0000576,8.12e-26,59;CL:0000040,8.12e-26,59;CL:0000559,8.12e-26,59;CL:0002032,2.24e-24,161;CL:0000837,2.24e-24,161;CL:0002031,4.11e-24,120;CL:0002087,7.46e-22,115;CL:0000094,3.21e-12,8;CL:0000134,5.99e-12,354;CL:0002320,2.73e-11,361;CL:0000048,3.75e-11,427;CL:0000723,4.05e-11,433;CL:0000034,4.63e-11,441;CL:0000081,6.75e-11,11;CL:0000219,5.14e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.84e-26;42!CL:0000049;7.20e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.80e-14!80;UBERON:0001474!6.37e-13!86;UBERON:0002390!1.08e-12!102;UBERON:0003061!1.08e-12!102;UBERON:0004765!1.53e-11!101;UBERON:0001434!1.53e-11!101;UBERON:0002193!2.87e-11!112;UBERON:0003081!6.74e-10!216;UBERON:0002405!6.60e-09!115;UBERON:0002204!1.35e-08!167;UBERON:0002384!3.98e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!8.80e-14!80;UBERON:0001474!6.37e-13!86;UBERON:0002390!1.08e-12!102;UBERON:0003061!1.08e-12!102;UBERON:0004765!1.53e-11!101;UBERON:0001434!1.53e-11!101;UBERON:0002193!2.87e-11!112;UBERON:0003081!6.74e-10!216;UBERON:0002405!6.60e-09!115;UBERON:0002204!1.35e-08!167;UBERON:0002384!3.98e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.47e-25,76;UBERON:0004765,7.13e-23,90;UBERON:0002390,1.40e-22,98;UBERON:0003061,1.40e-22,98;UBERON:0001474,4.14e-22,82;UBERON:0002193,2.90e-20,108;UBERON:0001434,2.97e-19,100;UBERON:0002405,3.99e-19,93;UBERON:0002204,2.33e-14,167;UBERON:0003081,1.51e-12,203;UBERON:0002384,6.52e-11,371;UBERON:0000926,7.96e-08,315;UBERON:0004120,7.96e-08,315;UBERON:0006603,7.96e-08,315 | |||
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|phase1_expression=0.726713517082227,1.07050261945492,0.563817616383885,4.00293193412522,1.34088328328186,3.48935409640147,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0.123766352960047,0.994192127183747,2.6893005858071,1.20538905604795,0,0.975865597581014,0,0,0,0,0.273748850145768,0,0.382067028739756,0.246301768349837,0.314843125254717,1.57345710739562,1.15148819429164,1.23852898652861,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0.293600439334847,7.20194031091441,4.01088894940283,2.38711957787437,0,0,0.515151135268373,1.74477886535478,0.755751887377619,0.485168122375632,3.71886459049095,1.6446715520873,4.33588919253145,3.16461631554365,3.33008918487831,2.60130452877444,10.3423704220986,6.45484683583826,4.06279459783025,3.38836211176688,1.63743690034707,1.79778787556068,11.9372718024652,8.98601275813062,11.5080682643827,1.64925650093358,0.997318288108159,1.27867425159808,11.6083695451434,17.5889419654253,11.8336227309159,3.26623264833766,4.69334626578181,2.17188844705117,9.6863920421339,12.8897172595648,10.1267963981083,0.211255286311942,1.70083439972035,1.04829322754188,0.673971786878971,1.50176892841506,0.32145117339416,0.285012743741249,0.79566670879636,0.730656615058536,0,0.546138611262131,0,1.28019066769952,0,0,0,0,0.569212969109448,1.17447437874188,2.6759125968766,0,5.60508562981536,0,1.57367816091066,1.17903228824749,1.43921049299656,0,0.651844533267181,0,0,0,0.294605907474837,0.221533894583621,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0,0,0,0.226618685395132,0.766440987203842,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0.821127996921047,1.81446068902259,1.60464117470104,2.02754165435919,2.43806866313962,0,0.12786256184353,0,0.50133791063589,0.434539556882471,0,0,0.189069634328136,0,0.087834785693126,0.654895377488563,0,0,0.324547393654683,0,0.132957960518865,0.715471872916026,1.71598473234038,1.48583000531826,0.39752481473341,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0,10.5424333948851,15.511210565933,0,1.49091585508596,0.379891534993739,0.529636723252875,0.573673241497627,0.709336764396714,0.560677600142307,0,0.49333509683432,0.311211035399766,0.538842688278752,0.490385709340376,0,0.576175924479999,0,0,0,0.448346041655403,0.23486899728753,0.323745888736263,0,0,0,0,1.18800285728205,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.567160915800105,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0.515281080091258,0.18611685633159,0.337552664482532,0.487185025805993,0,0.276149695926898,0,0.355009592516614,0.705264687593482,0.508681776931463,0.386521706326594,0.818238361772504,0.286804595389004,0.121973706129595,0.265059536642971,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.674156540800822,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.368965315629341,0,0.98775256867763,1.1240175325762,0.100528972411631,0,0,0,0,0.115930404975077,0.587043471179108,0.144366447761074,1.38895653772983,0.761016608938393,0,0.858486162094873,0.246217006087397,0,0.148631162288728,2.81201501960331,2.85569617938061,1.27597587518148,0.268675568108545,0.290633938513962,1.15014803749563,0.492663237895943,0.44024217006613,2.90259361757081,1.58531948758658,2.01987893482208,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.2933531432838,0.387815147273333,0,0,0,0,0.514414748524284,0,0,0,0,0.823240336780769,0,0,0.791951872933429,0.602878754119172,0,0.599837947092342,1.2162378064119,0,2.10833939483032,0.479249710983165,0,1.42636905040718,1.15825045334063,0,0.358121926479791,0.224170287987055,1.77327684181734,2.15627574859517,2.43851768931522,0,0,0.773288812777695,0,0,2.24702107184155,2.99161459204025,2.07207756718018,0.24538298343828,0.500170521059677,0,1.03985430765404,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,2.80428461064202,1.49418580924822,0.303127571446259,0,0.30239029332968,0.992431231275107,0.306923946576125,0,1.79394808957981,2.55853624533352,0.321707842287215,0,0.308419387605311,0.355123450626254,0.328508624055237,0.519254429183621,0.464841513839837,0.362578348774867,0.40101294060657,0.184161977871793,0.34444334449382,0,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0.438519753291869,0,0.256450125116389,0,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,1.30012049207304,1.6068392984416,0.096670718292122,0,0,0.413509717453592,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.255225424989168,0.4046311234222,0.929691098594572,0.94443704049192,0,0.616067160352178,0.532306030317022,0,0.37064843820784,0.715624433709956,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0.404364963146632,0,1.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| ||
|short_description=p3@RAB21 | |short_description=p3@RAB21 | ||
}} | }} |
Latest revision as of 17:34, 24 September 2015
Short description: | p3@RAB21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB21_5end |
Coexpression cluster: | C1685_immature_CD14_Eosinophils_CD34_migratory_lymphoma_Neutrophils |
Association with transcript: | 70bp_to_NM_014999, uc001swt.2_5end |
EntrezGene: | RAB21 |
HGNC: | 18263 |
UniProt: | Q9UL25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.18e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.18e-37 | 42 |
myeloid leukocyte | 3.36e-37 | 72 |
leukocyte | 1.16e-36 | 136 |
defensive cell | 2.80e-35 | 48 |
phagocyte | 2.80e-35 | 48 |
granulocyte monocyte progenitor cell | 6.45e-30 | 67 |
macrophage dendritic cell progenitor | 1.90e-28 | 61 |
hematopoietic cell | 7.76e-28 | 177 |
hematopoietic stem cell | 8.63e-27 | 168 |
myeloid lineage restricted progenitor cell | 1.05e-26 | 66 |
myeloid cell | 2.51e-26 | 108 |
common myeloid progenitor | 2.51e-26 | 108 |
monopoietic cell | 8.12e-26 | 59 |
monocyte | 8.12e-26 | 59 |
monoblast | 8.12e-26 | 59 |
promonocyte | 8.12e-26 | 59 |
hematopoietic oligopotent progenitor cell | 2.24e-24 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 4.11e-24 | 120 |
nongranular leukocyte | 7.46e-22 | 115 |
granulocyte | 3.21e-12 | 8 |
mesenchymal cell | 5.99e-12 | 354 |
connective tissue cell | 2.73e-11 | 361 |
multi fate stem cell | 3.75e-11 | 427 |
somatic stem cell | 4.05e-11 | 433 |
stem cell | 4.63e-11 | 441 |
blood cell | 6.75e-11 | 11 |
motile cell | 5.14e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.47e-25 | 76 |
skeletal element | 7.13e-23 | 90 |
hematopoietic system | 1.40e-22 | 98 |
blood island | 1.40e-22 | 98 |
bone element | 4.14e-22 | 82 |
hemolymphoid system | 2.90e-20 | 108 |
skeletal system | 2.97e-19 | 100 |
immune system | 3.99e-19 | 93 |
musculoskeletal system | 2.33e-14 | 167 |
lateral plate mesoderm | 1.51e-12 | 203 |
connective tissue | 6.52e-11 | 371 |
mesoderm | 7.96e-08 | 315 |
mesoderm-derived structure | 7.96e-08 | 315 |
presumptive mesoderm | 7.96e-08 | 315 |