FFCP PHASE1:Hg19::chr11:119217442..119217445,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:119217442..119217445,-
|short_description=p5@MFRP,p6@C1QTNF5
|description=CAGE_peak_5_at_MFRP_5end,CAGE_peak_6_at_C1QTNF5_5end
|association_with_transcrip...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114902,83552 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14344,18121 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXJ0,Q9BY79 | |||
|association_with_transcript=-59bp_to_ENST00000445041,ENST00000449574,ENST00000555262,NM_015645,NM_031433,uc001pwj.2,uc010rzf.1,uc010rzg.1_5end | |||
|cluster_id=chr11:119217442..119217445,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_5_at_MFRP_5end,CAGE_peak_6_at_C1QTNF5_5end | |||
|id=chr11:119217442..119217445,- | |id=chr11:119217442..119217445,- | ||
|ontology_enrichment_celltype=CL:0002586!3.66e-20!3;CL:0000149!2.22e-15!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.59e-53;3!CL:0000149;4.47e-40;4!CL:0000147;2.74e-12;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.39e-53,3;CL:0000149,4.94e-40,4;CL:0000147,2.82e-12,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!9.28e-44!3;UBERON:0005290!9.28e-44!3;UBERON:0010096!9.28e-44!3;UBERON:0000966!1.28e-26!5;UBERON:0005388!1.28e-26!5;UBERON:0001802!1.28e-26!5;UBERON:0005743!4.96e-22!86;UBERON:0001781!3.66e-20!3;UBERON:0001782!3.66e-20!3;UBERON:0005424!3.66e-20!3;UBERON:0000073!7.02e-20!94;UBERON:0001016!7.02e-20!94;UBERON:0002298!7.03e-17!8;UBERON:0002336!1.78e-15!1;UBERON:0001018!1.78e-15!1;UBERON:0002473!1.78e-15!1;UBERON:0005340!1.78e-15!1;UBERON:0002316!1.78e-15!1;UBERON:0003544!1.78e-15!1;UBERON:0001020!1.78e-15!1;UBERON:0005970!1.78e-15!1;UBERON:0002437!1.78e-15!1;UBERON:0003075!2.09e-15!86;UBERON:0007284!2.09e-15!86;UBERON:0002346!1.10e-14!90;UBERON:0001017!8.97e-13!82;UBERON:0000033!1.22e-12!123;UBERON:0000955!4.47e-12!69;UBERON:0006238!4.47e-12!69;UBERON:0000153!5.23e-12!129;UBERON:0007811!5.23e-12!129;UBERON:0000970!7.85e-12!20;UBERON:0004733!1.84e-11!12;UBERON:0002028!1.84e-11!12;UBERON:0007277!1.84e-11!12;UBERON:0002104!2.79e-11!21;UBERON:0004121!1.15e-10!169;UBERON:0004732!1.27e-10!13;UBERON:0000924!2.16e-10!173;UBERON:0006601!2.16e-10!173;UBERON:0000020!2.53e-10!23;UBERON:0001032!6.66e-10!24;UBERON:0004456!6.66e-10!24;UBERON:0003076!2.79e-09!15;UBERON:0003057!2.79e-09!15;UBERON:0007023!3.94e-09!115;UBERON:0001049!1.38e-08!57;UBERON:0005068!1.38e-08!57;UBERON:0006241!1.38e-08!57;UBERON:0007135!1.38e-08!57;UBERON:0001954!2.00e-08!2;UBERON:0003022!2.00e-08!2;UBERON:0002421!2.00e-08!2;UBERON:0002600!2.00e-08!2;UBERON:0005162!2.15e-08!2;UBERON:0000122!2.15e-08!2;UBERON:0002360!2.31e-08!2;UBERON:0000094!2.31e-08!2;UBERON:0007645!2.31e-08!2;UBERON:0002616!2.73e-08!59;UBERON:0003056!5.10e-08!61;UBERON:0000019!1.91e-07!19;UBERON:0000047!1.91e-07!19;UBERON:0004088!1.91e-07!19;UBERON:0003072!1.91e-07!19;UBERON:0003071!1.91e-07!19;UBERON:0004128!1.91e-07!19;UBERON:0001456!8.77e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.62e-71;5!UBERON:0005388;3.62e-71;5!UBERON:0001802;3.62e-71;5!UBERON:0001896;2.51e-53;3!UBERON:0005290;2.51e-53;3!UBERON:0001781;5.59e-53;3!UBERON:0001782;5.59e-53;3!UBERON:0002298;2.54e-27;6!UBERON:0000019;1.63e-19;19!UBERON:0000047;1.63e-19;19!UBERON:0004088;1.63e-19;19!UBERON:0010230;1.63e-19;19!UBERON:0000970;1.38e-18;20!UBERON:0002104;9.57e-18;21!UBERON:0001456;9.57e-18;21!UBERON:0000020;2.78e-16;23!UBERON:0001032;1.22e-15;24!UBERON:0004456;1.22e-15;24!UBERON:0007625;2.42e-15;11!UBERON:0004733;3.04e-14;12!UBERON:0002028;3.04e-14;12!UBERON:0004732;3.12e-13;13!UBERON:0000033;3.58e-08;50!UBERON:0001444;4.76e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.82e-59,6;UBERON:0005388,1.82e-59,6;UBERON:0001802,1.82e-59,6;UBERON:0001896,2.19e-53,3;UBERON:0005290,2.19e-53,3;UBERON:0010096,2.19e-53,3;UBERON:0001782,6.39e-53,3;UBERON:0005424,6.39e-53,3;UBERON:0001781,4.94e-40,4;UBERON:0002298,2.38e-27,6;UBERON:0000019,1.42e-18,20;UBERON:0000047,1.42e-18,20;UBERON:0010312,1.42e-18,20;UBERON:0004088,1.42e-18,20;UBERON:0010230,1.42e-18,20;UBERON:0003072,1.42e-18,20;UBERON:0004128,1.42e-18,20;UBERON:0003071,1.42e-18,20;UBERON:0000970,9.85e-18,21;UBERON:0002104,9.85e-18,21;UBERON:0001456,5.72e-17,22;UBERON:0000020,1.25e-15,24;UBERON:0001032,1.25e-15,24;UBERON:0004456,1.25e-15,24;UBERON:0007625,2.51e-15,11;UBERON:0004733,2.94e-14,12;UBERON:0002028,2.94e-14,12;UBERON:0007277,2.94e-14,12;UBERON:0004732,3.03e-13,13;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0005085,2.68e-12,31;UBERON:0002346,5.13e-12,86;UBERON:0003076,1.27e-11,15;UBERON:0003057,1.27e-11,15;UBERON:0010371,4.61e-10,104;UBERON:0001444,4.54e-08,49;UBERON:0010314,4.60e-08,132;UBERON:0000033,3.76e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56450125116389,0,1.95227036798582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,3.43880059764242,0.931446044120752,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93322478513567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@MFRP,p6@C1QTNF5 | |short_description=p5@MFRP,p6@C1QTNF5 | ||
}} | }} |
Latest revision as of 03:34, 16 September 2015
Short description: | p5@MFRP, p6@C1QTNF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MFRP_5end, CAGE_peak_6_at_C1QTNF5_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -59bp_to_ENST00000445041, ENST00000449574, ENST00000555262, NM_015645, NM_031433, uc001pwj.2, uc010rzf.1, uc010rzg.1_5end |
EntrezGene: | 114902,83552 |
HGNC: | 18121&submit=Submit 14344, 18121 |
UniProt: | Q9BXJ0Q9BY79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.39e-53 | 3 |
visual pigment cell | 4.94e-40 | 4 |
pigment cell | 2.82e-12 | 14 |