FFCP PHASE1:Hg19::chr13:84480650..84480663,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:84480650..84480663,- | |||
|description=CAGE_peak_at_chr13:84480650..84480663,- | |description=CAGE_peak_at_chr13:84480650..84480663,- | ||
|id=chr13:84480650..84480663,- | |id=chr13:84480650..84480663,- | ||
|ontology_enrichment_celltype=CL:0002178!1.28e-17!3;CL:0000319!9.73e-14!1;CL:1000415!9.25e-08!2;CL:0000054!1.05e-07!2;CL:0000137!1.05e-07!2;CL:0000092!1.05e-07!2;CL:0000159!1.64e-07!2 | |ontology_enrichment_celltype=CL:0002178!1.28e-17!3;CL:0000319!9.73e-14!1;CL:1000415!9.25e-08!2;CL:0000054!1.05e-07!2;CL:0000137!1.05e-07!2;CL:0000092!1.05e-07!2;CL:0000159!1.64e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.48e-12;2!CL:0000054;1.75e-12;2!CL:0000137;1.75e-12;2!CL:0000092;1.75e-12;2!CL:0002178;9.31e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.48e-12,2;CL:0000054,1.85e-12,2;CL:0000137,1.85e-12,2;CL:0000092,1.85e-12,2;CL:0002178,8.96e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.61e-09;10 | |||
|ontology_enrichment_disease=DOID:0060085!3.98e-14!1;DOID:3165!3.98e-14!1;DOID:0060121!3.98e-14!1;DOID:2438!3.98e-14!1;DOID:4418!3.98e-14!1;DOID:3030!9.73e-14!1;DOID:162!4.08e-10!235;DOID:14566!7.24e-10!239;DOID:3119!1.53e-08!14;DOID:299!2.88e-08!25;DOID:200!1.05e-07!2;DOID:4305!1.05e-07!2;DOID:3493!2.12e-07!2 | |ontology_enrichment_disease=DOID:0060085!3.98e-14!1;DOID:3165!3.98e-14!1;DOID:0060121!3.98e-14!1;DOID:2438!3.98e-14!1;DOID:4418!3.98e-14!1;DOID:3030!9.73e-14!1;DOID:162!4.08e-10!235;DOID:14566!7.24e-10!239;DOID:3119!1.53e-08!14;DOID:299!2.88e-08!25;DOID:200!1.05e-07!2;DOID:4305!1.05e-07!2;DOID:3493!2.12e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.49e-23;1!DOID:3165;1.49e-23;1!DOID:0060121;1.49e-23;1!DOID:2438;1.49e-23;1!DOID:4418;1.49e-23;1!DOID:200;1.75e-12;2!DOID:4305;1.75e-12;2!DOID:3093;3.07e-08;11!DOID:0060072;7.07e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.67e-23,1;DOID:3165,1.67e-23,1;DOID:0060121,1.67e-23,1;DOID:2438,1.67e-23,1;DOID:4418,1.67e-23,1;DOID:200,1.85e-12,2;DOID:4305,1.85e-12,2;DOID:3093,3.07e-08,11;DOID:0050686,1.11e-07,137;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239;DOID:0060072,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001282!8.58e-14!1;UBERON:0009842!8.58e-14!1;UBERON:0003704!8.58e-14!1;UBERON:0001171!8.58e-14!1;UBERON:0001172!8.58e-14!1;UBERON:0002294!3.57e-08!7;UBERON:0001173!3.57e-08!7;UBERON:0004912!3.57e-08!7;UBERON:0000945!3.56e-07!8;UBERON:0010039!3.56e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.73e-23;1!UBERON:0009842;5.73e-23;1!UBERON:0003704;5.73e-23;1!UBERON:0001171;5.73e-23;1!UBERON:0001172;5.73e-23;1!UBERON:0002294;1.35e-13;7!UBERON:0001173;1.35e-13;7!UBERON:0002110;8.31e-09;3!UBERON:0001280;1.46e-08;3!UBERON:0004647;1.46e-08;3!UBERON:0000014;7.07e-07;4!UBERON:0002394;9.90e-07;4!UBERON:0003928;9.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.40e-23,1;UBERON:0009842,6.40e-23,1;UBERON:0003704,6.40e-23,1;UBERON:0001171,6.40e-23,1;UBERON:0001172,6.40e-23,1;UBERON:0002294,8.79e-11,9;UBERON:0001173,8.79e-11,9;UBERON:0004912,8.79e-11,9;UBERON:0002110,8.31e-09,3;UBERON:0006242,8.31e-09,3;UBERON:0001280,1.51e-08,3;UBERON:0004647,1.51e-08,3;UBERON:0005171,1.51e-08,3;UBERON:0000014,7.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,0,0,0,0,0,0,3.00897137549192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13942055847001,0.69169171316418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37172145746577,0,0,7.45477028339264,0,4.99524023955326,0,0,0,0,0,0,1.22313785466253,2.30126261887133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,3.52407511158336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,0,0,0,0,0,0,3.00897137549192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13942055847001,0.69169171316418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37172145746577,0,0,7.45477028339264,0,4.99524023955326,0,0,0,0,0,0,1.22313785466253,2.30126261887133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,3.52407511158336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:84480650..84480663,- | |short_description=p@chr13:84480650..84480663,- | ||
}} | }} |
Latest revision as of 17:23, 24 July 2015
Short description: | p@chr13:84480650..84480663, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:84480650..84480663, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.48e-12 | 2 |
bone matrix secreting cell | 1.85e-12 | 2 |
osteocyte | 1.85e-12 | 2 |
osteoclast | 1.85e-12 | 2 |
epithelial cell of stomach | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.40e-23 | 1 |
acinus | 6.40e-23 | 1 |
intrahepatic bile duct | 6.40e-23 | 1 |
portal lobule | 6.40e-23 | 1 |
hepatic acinus | 6.40e-23 | 1 |
biliary system | 8.79e-11 | 9 |
biliary tree | 8.79e-11 | 9 |
biliary bud | 8.79e-11 | 9 |
gallbladder | 8.31e-09 | 3 |
gall bladder primordium | 8.31e-09 | 3 |
liver parenchyma | 1.51e-08 | 3 |
liver lobule | 1.51e-08 | 3 |
hepatic duct | 1.51e-08 | 3 |
zone of skin | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.67e-23 | 1 |
skin benign neoplasm | 1.67e-23 | 1 |
integumentary system benign neoplasm | 1.67e-23 | 1 |
dermis tumor | 1.67e-23 | 1 |
cutaneous fibrous histiocytoma | 1.67e-23 | 1 |
giant cell tumor | 1.85e-12 | 2 |
bone giant cell tumor | 1.85e-12 | 2 |
nervous system cancer | 3.07e-08 | 11 |
organ system cancer | 1.11e-07 | 137 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |
benign neoplasm | 7.27e-07 | 4 |