FFCP PHASE1:Hg19::chr11:31827535..31827565,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:31827535..31827565,-
|short_description=p11@PAX6
|description=CAGE_peak_11_at_PAX6_5end
|association_with_transcript=0bp_to_ENST00000533156_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533156_5end | |||
|cluster_id=chr11:31827535..31827565,- | |||
|coexpression_cluster_id=C3140 | |||
|description=CAGE_peak_11_at_PAX6_5end | |||
|id=chr11:31827535..31827565,- | |||
|ontology_enrichment_celltype=CL:0000306!1.13e-13!4;CL:0002222!1.13e-13!4;CL:0002224!1.13e-13!4;CL:0000128!1.57e-11!7;CL:0000126!1.57e-11!7;CL:0000127!1.57e-11!7;CL:0002453!1.57e-11!7;CL:0000064!5.11e-11!3;CL:0005012!5.11e-11!3;CL:0000067!5.11e-11!3;CL:0002304!5.11e-11!3;CL:0002605!6.83e-11!3;CL:0000075!4.27e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000306;5.02e-44;4!CL:0002222;5.02e-44;4!CL:0002224;5.02e-44;4!CL:0000064;1.17e-34;3!CL:0000067;1.17e-34;3!CL:0005012;1.17e-34;3!CL:0002304;1.17e-34;3!CL:0002605;4.82e-34;3!CL:0000047;1.66e-22;2!CL:0000075;1.37e-19;27!CL:0000128;5.55e-15;7!CL:0000126;5.55e-15;7!CL:0000127;5.55e-15;7!CL:0002319;2.80e-14;25!CL:0000342;1.32e-12;1!CL:0002565;1.32e-12;1!CL:0002535;5.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,6.27e-44,4;CL:0002222,6.27e-44,4;CL:0002224,6.27e-44,4;CL:0000064,1.39e-34,3;CL:0000067,1.39e-34,3;CL:0005012,1.39e-34,3;CL:0002304,1.39e-34,3;CL:0002605,3.85e-34,3;CL:0000075,1.51e-19,27;CL:0000128,5.04e-15,7;CL:0000126,5.04e-15,7;CL:0000127,5.04e-15,7;CL:0002453,5.04e-15,7;CL:0002319,2.61e-14,25;CL:0000133,1.24e-13,59;CL:0000047,9.33e-13,8;CL:0000342,1.25e-12,1;CL:0002565,1.25e-12,1;CL:0000221,4.83e-11,72;CL:0002535,5.11e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000133;3.58e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p11@PAX6 | |||
}} | }} |
Latest revision as of 14:51, 17 September 2015
Short description: | p11@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PAX6_5end |
Coexpression cluster: | C3140_argyrophil_Lens_Ciliary_eye_small_Astrocyte_Iris |
Association with transcript: | 0bp_to_ENST00000533156_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 6.27e-44 | 4 |
vertebrate lens cell | 6.27e-44 | 4 |
lens epithelial cell | 6.27e-44 | 4 |
ciliated cell | 1.39e-34 | 3 |
ciliated epithelial cell | 1.39e-34 | 3 |
multi-ciliated epithelial cell | 1.39e-34 | 3 |
non-pigmented ciliary epithelial cell | 1.39e-34 | 3 |
astrocyte of the cerebral cortex | 3.85e-34 | 3 |
columnar/cuboidal epithelial cell | 1.51e-19 | 27 |
oligodendrocyte | 5.04e-15 | 7 |
macroglial cell | 5.04e-15 | 7 |
astrocyte | 5.04e-15 | 7 |
oligodendrocyte precursor cell | 5.04e-15 | 7 |
neural cell | 2.61e-14 | 25 |
neurectodermal cell | 1.24e-13 | 59 |
neuronal stem cell | 9.33e-13 | 8 |
pigment cell (sensu Vertebrata) | 1.25e-12 | 1 |
iris pigment epithelial cell | 1.25e-12 | 1 |
ectodermal cell | 4.83e-11 | 72 |
epithelial cell of cervix | 5.11e-07 | 2 |