FFCP PHASE1:Hg19::chr15:56244870..56244891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4734 | |EntrezGene=4734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7727 | |HGNC=7727 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_ENST00000514893_5end | |association_with_transcript=51bp_to_ENST00000514893_5end | ||
|cluster_id=chr15:56244870..56244891,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_9_at_NEDD4_5end | |description=CAGE_peak_9_at_NEDD4_5end | ||
|id=chr15:56244870..56244891,- | |id=chr15:56244870..56244891,- | ||
|ontology_enrichment_celltype=CL:0000181!2.78e-25!12;CL:0000417!2.78e-25!12;CL:0000668!2.78e-25!12;CL:0000414!2.78e-25!12;CL:0000412!2.78e-25!12;CL:0000182!2.78e-25!12;CL:0002563!2.79e-09!4;CL:0000223!3.54e-08!59 | |ontology_enrichment_celltype=CL:0000181!2.78e-25!12;CL:0000417!2.78e-25!12;CL:0000668!2.78e-25!12;CL:0000414!2.78e-25!12;CL:0000412!2.78e-25!12;CL:0000182!2.78e-25!12;CL:0002563!2.79e-09!4;CL:0000223!3.54e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.75e-49;12!CL:0002253;1.71e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.05e-49,12;CL:0000223,1.42e-13,58;CL:0002253,2.02e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.82e-37;11!UBERON:0009497;1.39e-31;13!UBERON:0001041;1.62e-19;30!UBERON:0003104;6.07e-19;31!CL:0000223;5.50e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.33e-35!19;UBERON:0006925!5.33e-35!19;UBERON:0008836!5.33e-35!19;UBERON:0008835!4.64e-30!22;UBERON:0003894!4.64e-30!22;UBERON:0009854!1.07e-28!23;UBERON:0007499!2.65e-26!25;UBERON:0009497!2.65e-26!25;UBERON:0000015!2.65e-26!25;UBERON:0002423!2.65e-26!25;UBERON:0006235!2.65e-26!25;UBERON:0004161!2.65e-26!25;UBERON:0005057!3.05e-25!26;UBERON:0009856!3.05e-25!26;UBERON:0002365!5.76e-21!31;UBERON:0002330!5.76e-21!31;UBERON:0002368!2.02e-18!35;UBERON:0003929!3.44e-17!54;UBERON:0005172!8.97e-17!55;UBERON:0005173!8.97e-17!55;UBERON:0002417!6.03e-15!61;UBERON:0000916!6.03e-15!61;UBERON:0000949!4.90e-14!45;UBERON:0004921!1.13e-13!129;UBERON:0004185!1.13e-13!129;UBERON:0005911!7.74e-13!82;UBERON:0005177!5.12e-11!107;UBERON:0001007!6.42e-11!155;UBERON:0001555!6.42e-11!155;UBERON:0007026!6.42e-11!155;UBERON:0002530!2.17e-10!59;UBERON:0009569!2.60e-10!113;UBERON:0004119!8.74e-10!169;UBERON:0000925!8.74e-10!169;UBERON:0006595!8.74e-10!169;UBERON:0001242!2.79e-09!4;UBERON:0001262!2.79e-09!4;UBERON:0004786!2.79e-09!4;UBERON:0004808!2.79e-09!4;UBERON:0001277!2.79e-09!4;UBERON:0001052!3.30e-09!4;UBERON:0000077!1.09e-08!130;UBERON:0001041!1.25e-08!98;UBERON:0003350!1.36e-07!5;UBERON:0004907!1.55e-07!5;UBERON:0000059!3.03e-07!11;UBERON:0000160!3.41e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.38e-55;19!UBERON:0006925;6.38e-55;19!UBERON:0002423;1.12e-41;25!UBERON:0002365;2.82e-32;31!UBERON:0002330;2.82e-32;31!UBERON:0002368;1.85e-28;33!UBERON:0000949;8.15e-21;43!UBERON:0005172;1.86e-12;52!UBERON:0005173;1.86e-12;52!UBERON:0002417;6.43e-11;58!UBERON:0000916;6.43e-11;58!UBERON:0002530;8.20e-11;57!UBERON:0001007;3.97e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.55e-55,19;UBERON:0006925,5.55e-55,19;UBERON:0008836,5.55e-55,19;UBERON:0008835,1.89e-47,22;UBERON:0003894,1.89e-47,22;UBERON:0009854,2.25e-45,23;UBERON:0007499,1.01e-41,25;UBERON:0009497,1.01e-41,25;UBERON:0000015,1.01e-41,25;UBERON:0002423,1.01e-41,25;UBERON:0006235,1.01e-41,25;UBERON:0004161,1.01e-41,25;UBERON:0009856,4.18e-40,26;UBERON:0002365,1.39e-33,31;UBERON:0002330,1.39e-33,31;UBERON:0002368,1.05e-29,35;UBERON:0003929,4.34e-24,54;UBERON:0000949,5.16e-23,45;UBERON:0005911,2.39e-19,82;UBERON:0005172,4.20e-19,54;UBERON:0005173,4.20e-19,54;UBERON:0002530,1.92e-17,59;UBERON:0002417,3.82e-17,60;UBERON:0000916,3.82e-17,60;UBERON:0001041,9.86e-15,87;UBERON:0004921,4.28e-13,118;UBERON:0005177,1.35e-12,101;UBERON:0009569,2.75e-11,112;UBERON:0001007,1.62e-10,145;UBERON:0001555,1.62e-10,145;UBERON:0007026,1.62e-10,145;UBERON:0004119,1.86e-09,160;UBERON:0000925,1.86e-09,160;UBERON:0006595,1.86e-09,160;UBERON:0003914,1.64e-08,117;UBERON:0000490,2.40e-08,148;UBERON:0005256,3.90e-08,122;UBERON:0001048,1.15e-07,160;UBERON:0003104,1.17e-07,160;UBERON:0009142,1.17e-07,160 | |||
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|short_description=p9@NEDD4 | |short_description=p9@NEDD4 | ||
}} | }} |
Latest revision as of 05:00, 18 September 2015
Short description: | p9@NEDD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NEDD4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 51bp_to_ENST00000514893_5end |
EntrezGene: | NEDD4 |
HGNC: | 7727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.05e-49 | 12 |
endodermal cell | 1.42e-13 | 58 |
epithelial cell of large intestine | 2.02e-09 | 2 |